prot_P-wetherbeei_contig1690.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1690.1.1
Unique Nameprot_P-wetherbeei_contig1690.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length129
Homology
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: A0A835ZAA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAA6_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.930e-49
Identity = 76/118 (64.41%), Postives = 95/118 (80.51%), Query Frame = 0
Query:    1 MPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTDSEGNERRTPKVLVNSIDLLESRAE 118
            +P+LN+++L GR G DPV RY +DGK V+ LSLAVKREYH+LER A GIRYGEEETDWF LE+W+REAEYA KV  KG R+GI GS V D W D EG ER T KV+V+++++LE++AE
Sbjct:   84 IPKLNAVLLTGRLGQDPVARYFDDGKCVVQLSLAVKREYHALERKAMGIRYGEEETDWFQLELWSREAEYAMKVAAKGLRVGIEGSLVIDCWEDQEGEERATAKVIVSNMEVLETKAE 201          
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: B8C9K7_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9K7_THAPS)

HSP 1 Score: 159 bits (403), Expect = 4.000e-48
Identity = 76/121 (62.81%), Postives = 89/121 (73.55%), Query Frame = 0
Query:    1 MPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTDS-EGNERRTPKVLVNSIDLLESRAERE 120
            +P+LN + LVGR G  P P+Y +DGKVVLNLS+AVKR+YH LER  R IR GEEETDWFPLE W R+AEY    + KGARIGI GS V D W D   G +RR PK++V  ID+LESRAE E
Sbjct:   10 LPKLNVVTLVGRVGGTPDPKYFDDGKVVLNLSVAVKRKYHPLERKVRNIRSGEEETDWFPLEFWGRDAEYVTNYVEKGARIGITGSLVMDGWVDKMTGEQRRRPKIVVRHIDILESRAEAE 130          
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: A0A7R9W4H7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W4H7_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.110e-47
Identity = 77/123 (62.60%), Postives = 93/123 (75.61%), Query Frame = 0
Query:    1 MPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTDSEGNERRTP-KVLVNSIDLLESRAERETR 122
            +PRLN + L GR GNDP PRY +DGKVVLNLSLAV+R+YH LER  R I+YGEEETDWFPLE+W R+AE+A+  + KGARIGI GS + D W D    E RT  K+LV  +D+LE+RAE E R
Sbjct:  104 IPRLNIVTLSGRVGNDPEPRYFDDGKVVLNLSLAVQRKYHPLERKVRNIKYGEEETDWFPLELWGRDAEFASNFVDKGARIGITGSLMMDSWEDRNTGEPRTKHKILVKHLDILETRAEAEAR 226          
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: K0SQT6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQT6_THAOC)

HSP 1 Score: 161 bits (407), Expect = 1.950e-47
Identity = 77/123 (62.60%), Postives = 92/123 (74.80%), Query Frame = 0
Query:    1 MPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTDS-EGNERRTPKVLVNSIDLLESRAERETR 122
            +P+LNS+ LVGR GN+P P+Y +DGKVVLNLSLA KR+YH LER  R I+ GEEETDWF LEIW R+AEY A  + KGAR+GI GS V D W D   G +RR PK+ V  +D+LESRAE E R
Sbjct:   77 LPKLNSVTLVGRVGNEPEPKYFDDGKVVLNLSLACKRKYHPLERKVREIKSGEEETDWFALEIWGRDAEYVANYVDKGARMGITGSLVQDSWIDKVSGMKRRKPKIAVRQVDVLESRAEAELR 199          
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: A0A7S1DC37_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DC37_CYCTE)

HSP 1 Score: 160 bits (405), Expect = 7.550e-47
Identity = 76/123 (61.79%), Postives = 95/123 (77.24%), Query Frame = 0
Query:    1 MPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTD-SEGNERRTPKVLVNSIDLLESRAERETR 122
            +P  N++ +VGR GNDP P+YL+ GKVVLNLSLAVKR+YH LER A+ I+ GEEETDW+ LEIW + AEYAAK +TKGARIG+ GS   DQW D + GN R  PK++V  +D+LE+RAE E R
Sbjct:   92 IPTFNNVFMVGRVGNDPEPKYLDSGKVVLNLSLAVKRKYHRLERIAKEIKSGEEETDWYRLEIWGQTAEYAAKYVTKGARIGLSGSLRIDQWEDRTSGNMRARPKIVVQELDILETRAEAELR 214          
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: D8LMF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF5_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 8.250e-46
Identity = 74/124 (59.68%), Postives = 91/124 (73.39%), Query Frame = 0
Query:    1 MPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTDSEGNERRTPKVLVNSIDLLESRAERETRGD 124
            +PRLN + L G  G DP P+Y + G+VVLNLSLAVKREYH LER A GI  GEEETDWF LE+WNR+AEYAAKV  KG R+G+ G      W D EGN+R T K+LV ++++L+SRAE+  R D
Sbjct:   46 VPRLNMVFLTGYLGQDPKPKYFDSGRVVLNLSLAVKREYHPLERKALGIVQGEEETDWFQLEMWNRDAEYAAKVCKKGGRVGVTGGLSLQSWIDREGNDRTTVKILVQNLEVLDSRAEQAMRSD 169          
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: A0A7S2SIA7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SIA7_9STRA)

HSP 1 Score: 158 bits (399), Expect = 9.170e-46
Identity = 73/123 (59.35%), Postives = 95/123 (77.24%), Query Frame = 0
Query:    1 MPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTD-SEGNERRTPKVLVNSIDLLESRAERETR 122
            +PR+NS+ LVGR G DP P+YL+DGKVVLNLSLAVKR+YH LER  R I+ GEEETDWFPLEIW R+AEYA+K + KG+R+ + G+   D WTD + G  R+  K++V  +D+LE++AE E R
Sbjct:  107 IPRVNSVTLVGRVGQDPDPKYLDDGKVVLNLSLAVKRKYHPLERNVRNIKSGEEETDWFPLEIWGRDAEYASKYVDKGSRMMVTGTLQIDTWTDRNTGEPRKKAKIIVRHLDILETKAEAELR 229          
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: A0A7S1YYF7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YYF7_TRICV)

HSP 1 Score: 155 bits (392), Expect = 6.020e-45
Identity = 73/123 (59.35%), Postives = 90/123 (73.17%), Query Frame = 0
Query:    1 MPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTDSEGNERRTP-KVLVNSIDLLESRAERETR 122
            +PRLN + L GR GNDP PRY +DGKVVLNLSLA KR+YH LER  R I+YGEEETDW+PLE+W R+AE+ +K + KGARIGI GS   D W D    E R+  K+ V  +DLLE++AE + R
Sbjct:  107 IPRLNIVTLSGRVGNDPEPRYFDDGKVVLNLSLACKRKYHPLERKVRNIKYGEEETDWWPLEMWGRDAEFVSKYVNKGARIGITGSLTMDSWVDKNTGEPRSKYKIQVKHLDLLETKAEADLR 229          
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: A0A7S1ZHN3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZHN3_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.070e-44
Identity = 71/123 (57.72%), Postives = 93/123 (75.61%), Query Frame = 0
Query:    1 MPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTDSE-GNERRTPKVLVNSIDLLESRAERETR 122
            +P+LN + L GR GN P PRY +DGKVVLN+ LAVKR+YH LER  + I+YG+EETDWF LE+W R+AE+AA+ + KG+RIGI GS   D WTD + G  RR PK++V  +D+LE++AE E R
Sbjct:  113 IPKLNVVTLSGRVGNVPEPRYFDDGKVVLNMGLAVKRKYHPLERKVKNIQYGQEETDWFNLELWGRDAEFAARFVDKGSRIGITGSLAIDSWTDKQTGQYRRKPKIVVRHLDVLETKAEAELR 235          
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Match: A0A7S2USN2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2USN2_9STRA)

HSP 1 Score: 147 bits (372), Expect = 2.170e-42
Identity = 71/124 (57.26%), Postives = 92/124 (74.19%), Query Frame = 0
Query:    1 MPRLNSLVLVGRCGNDPV-PRYLNDGKVVLNLSLAVKREYHSLERTARGIRYGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTD-SEGNERRTPKVLVNSIDLLESRAERETR 122
            +P+ N + L GR GN  + P+Y +DGKVVL+LSLAVKR+YH LER A  I+ G+EETDWF LEIW R+AEYAAK + KG+RIG+ GS V D WTD + G  R  PK+LV  +D+LE++AE + R
Sbjct:   40 IPKFNVVTLSGRVGNPQLEPKYFDDGKVVLSLSLAVKRKYHPLERRAYNIKSGDEETDWFALEIWGRDAEYAAKYVEKGSRIGVTGSLVVDNWTDRATGEPRSRPKILVKQLDILETKAEADLR 163          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1690.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZAA6_9STRA1.930e-4964.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B8C9K7_THAPS4.000e-4862.81Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7R9W4H7_9STRA1.110e-4762.60Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
K0SQT6_THAOC1.950e-4762.60Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S1DC37_CYCTE7.550e-4761.79Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
D8LMF5_ECTSI8.250e-4659.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2SIA7_9STRA9.170e-4659.35Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1YYF7_TRICV6.020e-4559.35Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S1ZHN3_9STRA1.070e-4457.72Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S2USN2_9STRA2.170e-4257.26Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011344Single-stranded DNA-binding proteinTIGRFAMTIGR00621TIGR00621coord: 4..125
e-value: 1.6E-26
score: 91.5
IPR011344Single-stranded DNA-binding proteinPIRSFPIRSF002070SSBcoord: 1..128
e-value: 9.7E-24
score: 82.2
IPR011344Single-stranded DNA-binding proteinPANTHERPTHR10302SINGLE-STRANDED DNA-BINDING PROTEINcoord: 2..121
IPR011344Single-stranded DNA-binding proteinHAMAPMF_00984SSBcoord: 4..117
score: 24.132183
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 2..124
e-value: 2.0E-27
score: 97.5
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 4..127
IPR000424Primosome PriB/single-strand DNA-bindingPFAMPF00436SSBcoord: 4..112
e-value: 2.7E-22
score: 78.8
IPR000424Primosome PriB/single-strand DNA-bindingPROSITEPS50935SSBcoord: 4..114
score: 25.279129
IPR000424Primosome PriB/single-strand DNA-bindingCDDcd04496SSB_OBFcoord: 8..113
e-value: 6.78876E-25
score: 89.2085
NoneNo IPR availablePANTHERPTHR10302:SF19SINGLE-STRANDED DNA-BINDING PROTEIN 1coord: 2..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1690contigP-wetherbeei_contig1690:629..1332 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1690.1.1mRNA_P-wetherbeei_contig1690.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1690 629..1353 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1690.1.1 ID=prot_P-wetherbeei_contig1690.1.1|Name=mRNA_P-wetherbeei_contig1690.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=129bp
MPRLNSLVLVGRCGNDPVPRYLNDGKVVLNLSLAVKREYHSLERTARGIR
YGEEETDWFPLEIWNREAEYAAKVITKGARIGIRGSFVCDQWTDSEGNER
RTPKVLVNSIDLLESRAERETRGDDGGDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011344ssDNA-bd
IPR012340NA-bd_OB-fold
IPR000424Primosome_PriB/ssb