mRNA_P-wetherbeei_contig16880.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16880.1.1 vs. uniprot
Match: A0A4Z0C592_9BURK (Cyclase family protein n=1 Tax=Ramlibacter henchirensis TaxID=204072 RepID=A0A4Z0C592_9BURK) HSP 1 Score: 114 bits (286), Expect = 5.740e-29 Identity = 65/97 (67.01%), Postives = 75/97 (77.32%), Query Frame = 1
Query: 1 MQSIKHLRRAAAVLIVSAACAGGAVAQN-----DWCKSKWGPNDEIGAANLLTPQLAAAAARLVKTGKTYALGFETNSQTAAYAPRTWSLTVLQPGQ 276
M+ K +R AAA L + A AG A Q DWC+SK+GPNDEIGAANLLTP+LA AA RLV+TGKTYALG ETN++T A+APRTWSLTVLQPGQ
Sbjct: 1 MRMPKTIRLAAAGLAL--AFAGSAFPQQAPAAPDWCRSKFGPNDEIGAANLLTPELALAATRLVRTGKTYALGGETNAKTPAFAPRTWSLTVLQPGQ 95
BLAST of mRNA_P-wetherbeei_contig16880.1.1 vs. uniprot
Match: A0A6H2HA52_9BURK (Uncharacterized protein n=1 Tax=Polaromonas vacuolata TaxID=37448 RepID=A0A6H2HA52_9BURK) HSP 1 Score: 114 bits (285), Expect = 7.770e-29 Identity = 53/67 (79.10%), Postives = 61/67 (91.04%), Query Frame = 1
Query: 76 AQNDWCKSKWGPNDEIGAANLLTPQLAAAAARLVKTGKTYALGFETNSQTAAYAPRTWSLTVLQPGQ 276
AQ+DWCKSKWG DEIGAANLLTPQ+A AA+LVKTGKTYALGFETNS +AAYAPR W++T++QPGQ
Sbjct: 27 AQDDWCKSKWGAADEIGAANLLTPQMAIDAAKLVKTGKTYALGFETNSASAAYAPRNWAVTIVQPGQ 93
BLAST of mRNA_P-wetherbeei_contig16880.1.1 vs. uniprot
Match: UPI0019942B1D (Cyclase family protein n=1 Tax=Microbacteriaceae bacterium TaxID=1873462 RepID=UPI0019942B1D) HSP 1 Score: 108 bits (271), Expect = 9.440e-27 Identity = 55/94 (58.51%), Postives = 70/94 (74.47%), Query Frame = 1
Query: 1 MQSIKHLRRAAAVLIVSAAC--AGGAVAQNDWCKSKWGPNDEIGAANLLTPQLAAAAARLVKTGKTYALGFETNSQTAAYAPRTWSLTVLQPGQ 276
+ S +LR A + ++AA A A+AQ+DWCKSKWGPND++GA NLLTP + AAA+L+KTGKTY LG ETNSQT A+ RTW+L + QPGQ
Sbjct: 3 LHSRTNLRSALGLAALAAAAFTATPALAQDDWCKSKWGPNDQVGALNLLTPAMTQAAAKLIKTGKTYRLGVETNSQTPAFGTRTWTLLIQQPGQ 96
BLAST of mRNA_P-wetherbeei_contig16880.1.1 vs. uniprot
Match: A0A1F4I3E4_9BURK (Polyketide cyclase n=1 Tax=Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_69_20 TaxID=1797561 RepID=A0A1F4I3E4_9BURK) HSP 1 Score: 108 bits (270), Expect = 1.320e-26 Identity = 54/82 (65.85%), Postives = 65/82 (79.27%), Query Frame = 1
Query: 31 AAVLIVSAACAGGAVAQNDWCKSKWGPNDEIGAANLLTPQLAAAAARLVKTGKTYALGFETNSQTAAYAPRTWSLTVLQPGQ 276
AA L ++ A A+AQ DWCKSKWGP DEIGAANLLTP++A AA+LVKTGK+Y LG ETN+QT AYA RTW++ + QPGQ
Sbjct: 15 AATLAAASLVATPALAQADWCKSKWGPADEIGAANLLTPEMARDAAKLVKTGKSYRLGVETNAQTPAYATRTWAVLIQQPGQ 96
BLAST of mRNA_P-wetherbeei_contig16880.1.1 vs. uniprot
Match: UPI000B4B1912 (cyclase family protein n=1 Tax=Rhodomicrobium TaxID=1068 RepID=UPI000B4B1912) HSP 1 Score: 107 bits (268), Expect = 2.440e-26 Identity = 55/90 (61.11%), Postives = 68/90 (75.56%), Query Frame = 1
Query: 13 KHLRRAAAVLIVSAACAGGAVAQND--WCKSKWGPNDEIGAANLLTPQLAAAAARLVKTGKTYALGFETNSQTAAYAPRTWSLTVLQPGQ 276
K R A L ++A AGGA AQ++ WCKSKWGP+DE GAAN++TP+ AA +LVKTGKTY LG ETN++T A+APRTW+ VLQPGQ
Sbjct: 3 KFWRPAVLGLSIAALAAGGAAAQDNPGWCKSKWGPDDERGAANMITPESVLAATKLVKTGKTYPLGVETNAKTPAFAPRTWATIVLQPGQ 92
BLAST of mRNA_P-wetherbeei_contig16880.1.1 vs. uniprot
Match: A0A0S9LUE5_9BURK (Polyketide cyclase n=3 Tax=Pseudorhodoferax TaxID=747294 RepID=A0A0S9LUE5_9BURK) HSP 1 Score: 107 bits (267), Expect = 3.530e-26 Identity = 56/83 (67.47%), Postives = 64/83 (77.11%), Query Frame = 1
Query: 28 AAAVLIVSAACAGGAVAQNDWCKSKWGPNDEIGAANLLTPQLAAAAARLVKTGKTYALGFETNSQTAAYAPRTWSLTVLQPGQ 276
AAA L V ACA Q DWCKSKWG NDEIGA NLLTP+LA AA++LVKTGKTY LG ETN++T AY PR+W+L + QPGQ
Sbjct: 13 AAASLAVLPACAQ-QPQQPDWCKSKWGANDEIGAGNLLTPELALAASKLVKTGKTYRLGVETNAKTPAYGPRSWALVINQPGQ 94
BLAST of mRNA_P-wetherbeei_contig16880.1.1 vs. uniprot
Match: A0A480AKA6_9BURK (Polyketide cyclase n=1 Tax=Aquabacterium pictum TaxID=2315236 RepID=A0A480AKA6_9BURK) HSP 1 Score: 106 bits (265), Expect = 7.180e-26 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 1
Query: 31 AAVLIVSAACAGGAVAQNDWCKSKWGPNDEIGAANLLTPQLAAAAARLVKTGKTYALGFETNSQTAAYAPRTWSLTVLQPGQ 276
AA L ++ A A+AQ DWCKSKWGPND++GA NLLTP + AA+L+KTGKTY LG ETN+QT A+A RTWS+ + QPGQ
Sbjct: 15 AATLAAASLAATPALAQADWCKSKWGPNDQVGALNLLTPAMTQNAAKLIKTGKTYRLGVETNAQTPAFATRTWSVLIQQPGQ 96
BLAST of mRNA_P-wetherbeei_contig16880.1.1 vs. uniprot
Match: UPI000B2B23CE (hypothetical protein n=1 Tax=Microvirga massiliensis TaxID=1033741 RepID=UPI000B2B23CE) HSP 1 Score: 99.8 bits (247), Expect = 1.570e-25 Identity = 53/84 (63.10%), Postives = 66/84 (78.57%), Query Frame = 1
Query: 28 AAAVLIVSAACAGGAVAQND--WCKSKWGPNDEIGAANLLTPQLAAAAARLVKTGKTYALGFETNSQTAAYAPRTWSLTVLQPG 273
A AV V++ A GA AQ+ WCKSK+GPNDEIGAANLLTP++A AA+LVKTGK Y+LG ET+S+T AY PR+W+L + QPG
Sbjct: 7 ALAVAAVTSFLAFGAQAQDSQTWCKSKYGPNDEIGAANLLTPEVALNAAKLVKTGKPYSLGAETSSKTPAYGPRSWALAINQPG 90
BLAST of mRNA_P-wetherbeei_contig16880.1.1 vs. uniprot
Match: UPI0003A0347D (cyclase family protein n=3 Tax=Variovorax paradoxus TaxID=34073 RepID=UPI0003A0347D) HSP 1 Score: 103 bits (257), Expect = 9.540e-25 Identity = 53/90 (58.89%), Postives = 66/90 (73.33%), Query Frame = 1
Query: 7 SIKHLRRAAAVLIVSAACAGGAVAQNDWCKSKWGPNDEIGAANLLTPQLAAAAARLVKTGKTYALGFETNSQTAAYAPRTWSLTVLQPGQ 276
SI + R AA L + AG + +WC+SK+GP DE+GAANLLTPQLA AA+LVKTGKTY LG ETNS+T A+ PR+W+L + QPGQ
Sbjct: 2 SISAMTRLAAALALVTLAAG--TSAQEWCRSKYGPADEVGAANLLTPQLALEAAKLVKTGKTYRLGVETNSKTPAFGPRSWALAINQPGQ 89
BLAST of mRNA_P-wetherbeei_contig16880.1.1 vs. uniprot
Match: A2SM32_METPP (Putative polyketide cyclase n=6 Tax=Methylibium TaxID=316612 RepID=A2SM32_METPP) HSP 1 Score: 103 bits (257), Expect = 1.070e-24 Identity = 59/92 (64.13%), Postives = 68/92 (73.91%), Query Frame = 1
Query: 13 KHLRRAAAVLIVS---AACAGGAVAQ-NDWCKSKWGPNDEIGAANLLTPQLAAAAARLVKTGKTYALGFETNSQTAAYAPRTWSLTVLQPGQ 276
K LRR A L ++ AA A A+A +WCKSK+GP DEIGAANLL+PQLA AA+LVKTGKTY LG ETNS++ AY PR WSLTV PGQ
Sbjct: 5 KALRRGAVALSIALGLAASATQALAHAEEWCKSKYGPTDEIGAANLLSPQLALDAAKLVKTGKTYRLGAETNSRSPAYPPRGWSLTVTSPGQ 96 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16880.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16880.1.1 >prot_P-wetherbeei_contig16880.1.1 ID=prot_P-wetherbeei_contig16880.1.1|Name=mRNA_P-wetherbeei_contig16880.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=92bp MQSIKHLRRAAAVLIVSAACAGGAVAQNDWCKSKWGPNDEIGAANLLTPQback to top mRNA from alignment at P-wetherbeei_contig16880:175..450- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16880.1.1 ID=mRNA_P-wetherbeei_contig16880.1.1|Name=mRNA_P-wetherbeei_contig16880.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=276bp|location=Sequence derived from alignment at P-wetherbeei_contig16880:175..450- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16880:175..450- >mRNA_P-wetherbeei_contig16880.1.1 ID=mRNA_P-wetherbeei_contig16880.1.1|Name=mRNA_P-wetherbeei_contig16880.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=276bp|location=Sequence derived from alignment at P-wetherbeei_contig16880:175..450- (Phaeothamnion wetherbeei SAG_119_79)back to top |