mRNA_P-wetherbeei_contig16873.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16873.2.1
Unique NamemRNA_P-wetherbeei_contig16873.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16873.2.1 vs. uniprot
Match: D7G688_ECTSI (ADP,ATP carrier protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G688_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 1.350e-35
Identity = 68/89 (76.40%), Postives = 78/89 (87.64%), Query Frame = 1
Query:    1 GWLRDAVFPVYGRLEAAKFISLGGLQFFIIFVLTLTRDMKDALIVTHCGAEAISVLKVYGVLPAATLFMLYYSKLSSKLSKRALFYVTA 267
            G LRDA+FP+YG  E  KF++LGG+QFFIIFVLTLTRD+KD LI+T CGAEAIS LKVYGVLPAAT+FML YSK+S+ LSKRALFY TA
Sbjct:   10 GRLRDALFPIYGGEETGKFLALGGIQFFIIFVLTLTRDLKDTLIITSCGAEAISFLKVYGVLPAATVFMLAYSKVSTLLSKRALFYATA 98          
BLAST of mRNA_P-wetherbeei_contig16873.2.1 vs. uniprot
Match: A0A7S1Z3I4_9STRA (ADP,ATP carrier protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z3I4_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.420e-29
Identity = 54/86 (62.79%), Postives = 69/86 (80.23%), Query Frame = 1
Query:    7 LRDAVFPVYGRLEAAKFISLGGLQFFIIFVLTLTRDMKDALIVTHCGAEAISVLKVYGVLPAATLFMLYYSKLSSKLSKRALFYVT 264
            +RDAVFP+YG+ E   F+ LG L+FFIIF+LTLTRD KD L+VT CGAEAI+ LKVYGVLPAAT F+  +++ SS  S++ LFY+T
Sbjct:    6 VRDAVFPIYGKDEMNLFLLLGSLKFFIIFILTLTRDTKDTLVVTQCGAEAIAFLKVYGVLPAATAFIAAFAQASSVYSRQKLFYIT 91          
BLAST of mRNA_P-wetherbeei_contig16873.2.1 vs. uniprot
Match: A0A7S2P7Y9_9STRA (ADP,ATP carrier protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P7Y9_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.960e-28
Identity = 59/86 (68.60%), Postives = 68/86 (79.07%), Query Frame = 1
Query:    7 LRDAVFPVYGRLEAAKFISLGGLQFFIIFVLTLTRDMKDALIVTHCGAEAISVLKVYGVLPAATLFMLYYSKLSSKLSKRALFYVT 264
            LRDA+FPVYGR E  KF+ LG ++FFII VLTLTRD KD LIVT CGAEAI+ LK+YGVLP+A  F   YSK S+ LSK+ALFY T
Sbjct:   22 LRDAIFPVYGRNEIIKFLLLGSMKFFIIMVLTLTRDTKDTLIVTQCGAEAIAFLKIYGVLPSAVAFTAIYSKASNILSKQALFYST 107          
BLAST of mRNA_P-wetherbeei_contig16873.2.1 vs. uniprot
Match: A0A7S3UYU3_HETAK (ADP,ATP carrier protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYU3_HETAK)

HSP 1 Score: 114 bits (284), Expect = 1.330e-27
Identity = 58/87 (66.67%), Postives = 68/87 (78.16%), Query Frame = 1
Query:    7 LRDAVFPVYGRLEAAKFISLGGLQFFIIFVLTLTRDMKDALIVTHCGAEAISVLKVYGVLPAATLFMLYYSKLSSKLSKRALFYVTA 267
            LRDA+FP+YG  E  KF ++  + FFI+FVL +TRD KD L+VT CGAEAIS LK+YGVLPAATLFML YSK S+ LSK  LFY TA
Sbjct:   94 LRDALFPIYGSHELKKFFTISMINFFIVFVLVITRDAKDTLVVTSCGAEAISFLKLYGVLPAATLFMLGYSKASTVLSKPRLFYGTA 180          
BLAST of mRNA_P-wetherbeei_contig16873.2.1 vs. uniprot
Match: A0A1Z5KN04_FISSO (ADP,ATP carrier protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KN04_FISSO)

HSP 1 Score: 112 bits (280), Expect = 4.740e-27
Identity = 53/85 (62.35%), Postives = 66/85 (77.65%), Query Frame = 1
Query:   10 RDAVFPVYGRLEAAKFISLGGLQFFIIFVLTLTRDMKDALIVTHCGAEAISVLKVYGVLPAATLFMLYYSKLSSKLSKRALFYVT 264
            R AVFP+YG  E  KF+ +G ++FF+I  LTLTRD KD LIVT CGAEAI+ LK+YGVLPAAT F+  YSKLS+ + K+ LFY+T
Sbjct:   81 RQAVFPIYGSHEITKFLLIGAIKFFVILALTLTRDTKDTLIVTQCGAEAIAFLKIYGVLPAATAFIALYSKLSNSVGKKTLFYIT 165          
BLAST of mRNA_P-wetherbeei_contig16873.2.1 vs. uniprot
Match: B7FWL8_PHATC (ADP,ATP carrier protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWL8_PHATC)

HSP 1 Score: 111 bits (277), Expect = 1.240e-26
Identity = 53/86 (61.63%), Postives = 66/86 (76.74%), Query Frame = 1
Query:    7 LRDAVFPVYGRLEAAKFISLGGLQFFIIFVLTLTRDMKDALIVTHCGAEAISVLKVYGVLPAATLFMLYYSKLSSKLSKRALFYVT 264
            +R AVFP+YG  E  KF+ +G ++FFII  LTLTRD KD LIVT CGAEAI+ LK+YGVLPAAT F+  YSK+S+ + K+ LFY T
Sbjct:   85 VRQAVFPIYGNQEVTKFLLIGSIKFFIILALTLTRDTKDTLIVTQCGAEAIAFLKIYGVLPAATAFIALYSKMSNAMGKKMLFYST 170          
BLAST of mRNA_P-wetherbeei_contig16873.2.1 vs. uniprot
Match: A0A7S4JV62_9STRA (ADP,ATP carrier protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JV62_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.530e-26
Identity = 53/85 (62.35%), Postives = 66/85 (77.65%), Query Frame = 1
Query:   10 RDAVFPVYGRLEAAKFISLGGLQFFIIFVLTLTRDMKDALIVTHCGAEAISVLKVYGVLPAATLFMLYYSKLSSKLSKRALFYVT 264
            R  VFP+YGR EA KF  +G ++FF+I  LTLTRD+KD ++VT CGAEAIS LK+YGVLPAAT F+  YSK++S L K+ LFY T
Sbjct:   33 RRTVFPIYGREEAKKFFLVGSIKFFVIMALTLTRDLKDTMLVTQCGAEAISFLKIYGVLPAATGFIALYSKMASVLDKKTLFYTT 117          
BLAST of mRNA_P-wetherbeei_contig16873.2.1 vs. uniprot
Match: A0A7S3V8I3_9STRA (ADP,ATP carrier protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V8I3_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.830e-26
Identity = 54/85 (63.53%), Postives = 67/85 (78.82%), Query Frame = 1
Query:   10 RDAVFPVYGRLEAAKFISLGGLQFFIIFVLTLTRDMKDALIVTHCGAEAISVLKVYGVLPAATLFMLYYSKLSSKLSKRALFYVT 264
            RDAVFP+YG  E  KF+ +G ++FF+I  LTLTRD+KD L+VT CGAEAI+ LK+YGVLPAAT F+  YSK+SS + KR LFY T
Sbjct:  143 RDAVFPIYGD-EVKKFLLMGAIKFFVIMALTLTRDLKDTLVVTQCGAEAIAFLKIYGVLPAATSFIALYSKMSSVMEKRQLFYTT 226          
BLAST of mRNA_P-wetherbeei_contig16873.2.1 vs. uniprot
Match: W7TBM9_9STRA (ADP,ATP carrier protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBM9_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.830e-26
Identity = 56/84 (66.67%), Postives = 69/84 (82.14%), Query Frame = 1
Query:    7 LRDAVFPVYGRLEAAKFISLGGLQFFIIFVLTLTRDMKDALIVTHCGAEAISVLKVYGVLPAATLFMLYYSKLSSKLSKRALFY 258
            LRDAVFP+YGR E  KF S+G ++F I+FVLT+TRD+KD LIVT CGAE+I+ LKVYGVLPAA  F + YSK+S+ LSK AL+Y
Sbjct:  123 LRDAVFPIYGR-EVHKFFSMGMIKFLIVFVLTITRDVKDTLIVTSCGAESIAFLKVYGVLPAAAAFTVAYSKMSNALSKDALYY 205          
BLAST of mRNA_P-wetherbeei_contig16873.2.1 vs. uniprot
Match: A0A448ZK66_9STRA (ADP,ATP carrier protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZK66_9STRA)

HSP 1 Score: 109 bits (273), Expect = 4.240e-26
Identity = 52/85 (61.18%), Postives = 66/85 (77.65%), Query Frame = 1
Query:   10 RDAVFPVYGRLEAAKFISLGGLQFFIIFVLTLTRDMKDALIVTHCGAEAISVLKVYGVLPAATLFMLYYSKLSSKLSKRALFYVT 264
            R+ +FP+YG+ E  KF+ +G ++FFII  LTLTRD KD L+VT CGAEAI+ LK+YGVLPAAT F+  YSK+S  LSK+ LFY T
Sbjct:   76 RETLFPIYGKDEVHKFLLIGSIKFFIIMALTLTRDTKDTLVVTQCGAEAIAFLKIYGVLPAATAFIALYSKMSDVLSKKTLFYST 160          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16873.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G688_ECTSI1.350e-3576.40ADP,ATP carrier protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1Z3I4_9STRA2.420e-2962.79ADP,ATP carrier protein (Fragment) n=1 Tax=Ditylum... [more]
A0A7S2P7Y9_9STRA1.960e-2868.60ADP,ATP carrier protein n=1 Tax=Leptocylindrus dan... [more]
A0A7S3UYU3_HETAK1.330e-2766.67ADP,ATP carrier protein (Fragment) n=1 Tax=Heteros... [more]
A0A1Z5KN04_FISSO4.740e-2762.35ADP,ATP carrier protein n=2 Tax=Fistulifera solari... [more]
B7FWL8_PHATC1.240e-2661.63ADP,ATP carrier protein n=2 Tax=Phaeodactylum tric... [more]
A0A7S4JV62_9STRA1.530e-2662.35ADP,ATP carrier protein n=1 Tax=Odontella aurita T... [more]
A0A7S3V8I3_9STRA1.830e-2663.53ADP,ATP carrier protein (Fragment) n=1 Tax=Chaetoc... [more]
W7TBM9_9STRA2.830e-2666.67ADP,ATP carrier protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A448ZK66_9STRA4.240e-2661.18ADP,ATP carrier protein n=1 Tax=Pseudo-nitzschia m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16873contigP-wetherbeei_contig16873:1073..1476 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G688
Preferred nameNTT2
PFAMsTLC
Model size267
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal anchor
Exons2
Evalue2.22e-36
EggNOG OGsCOG3202@1|root,2RM9E@2759|Eukaryota
DescriptionTLC ATP/ADP transporter
Cds size267
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186100.634029-CDS-P-wetherbeei_contig16873:1072..12431683186100.634029-CDS-P-wetherbeei_contig16873:1072..1243Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16873 1073..1243 +
1683186100.6456687-CDS-P-wetherbeei_contig16873:1380..14761683186100.6456687-CDS-P-wetherbeei_contig16873:1380..1476Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16873 1381..1476 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16873.2.1prot_P-wetherbeei_contig16873.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16873 1073..1476 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16873.2.1

>prot_P-wetherbeei_contig16873.2.1 ID=prot_P-wetherbeei_contig16873.2.1|Name=mRNA_P-wetherbeei_contig16873.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=89bp
GWLRDAVFPVYGRLEAAKFISLGGLQFFIIFVLTLTRDMKDALIVTHCGA
EAISVLKVYGVLPAATLFMLYYSKLSSKLSKRALFYVTA
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mRNA from alignment at P-wetherbeei_contig16873:1073..1476+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16873.2.1 ID=mRNA_P-wetherbeei_contig16873.2.1|Name=mRNA_P-wetherbeei_contig16873.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=404bp|location=Sequence derived from alignment at P-wetherbeei_contig16873:1073..1476+ (Phaeothamnion wetherbeei SAG_119_79)
GGGTGGCTGCGCGACGCCGTCTTTCCTGTTTATGGCCGTTTGGAGGCGGC CAAGTTCATTAGCTTGGGCGGCCTGCAGTTTTTCATCATCTTTGTACTGA CCCTCACGCGAGACATGAAGGATGCTCTCATCGTCACCCACTGCGGAGCC GAGGCCATTTCCGTCCTCAAGGTTGATCCTTAGGCGATTTGAATCCTCAG GAGTGCAACAGTTCAACCGTTCTTGTGTTTCTTTGCCATGGCGCGACGCT GCGATTTCACCACCTTATTCGGAGCCGCCGGCGTCCATTTACCTTACGCG ACGTGCAGGTCTATGGAGTGCTTCCTGCGGCGACGCTCTTCATGCTGTAC TACTCAAAGCTGTCCTCCAAGCTGTCGAAGCGCGCACTGTTTTATGTGAC GGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16873:1073..1476+

>mRNA_P-wetherbeei_contig16873.2.1 ID=mRNA_P-wetherbeei_contig16873.2.1|Name=mRNA_P-wetherbeei_contig16873.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=267bp|location=Sequence derived from alignment at P-wetherbeei_contig16873:1073..1476+ (Phaeothamnion wetherbeei SAG_119_79)
GGGTGGCTGCGCGACGCCGTCTTTCCTGTTTATGGCCGTTTGGAGGCGGC
CAAGTTCATTAGCTTGGGCGGCCTGCAGTTTTTCATCATCTTTGTACTGA
CCCTCACGCGAGACATGAAGGATGCTCTCATCGTCACCCACTGCGGAGCC
GAGGCCATTTCCGTCCTCAAGGTCTATGGAGTGCTTCCTGCGGCGACGCT
CTTCATGCTGTACTACTCAAAGCTGTCCTCCAAGCTGTCGAAGCGCGCAC
TGTTTTATGTGACGGCC
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