mRNA_P-wetherbeei_contig1687.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1687.1.1
Unique NamemRNA_P-wetherbeei_contig1687.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1687.1.1 vs. uniprot
Match: A0A3D3UHF9_9PROT (Phosphoribosyl-AMP cyclohydrolase n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3D3UHF9_9PROT)

HSP 1 Score: 271 bits (692), Expect = 3.380e-91
Identity = 131/159 (82.39%), Postives = 145/159 (91.19%), Query Frame = 1
Query:    1 MENRNELRFAPRLSVEQVEESTELAPKFDERGLIPVVTTDAASGEVLMHGYMNAQAFRETVARGEAVYWSRSRQALWHKGATSGLVQKVVEIRIDDDQDAVWLRVNLIGGASCHVGYRSCFYRSVPVGGAGDVKLQFEESEKVFDPKAVYGDAPNPTQL 477
            M N+ +++F+ R +VEQVEES ELAPKFDE GLIPVVTTDA+SGEVLMHGYMN +AFR+TVA GEAVYWSRSR+ LWHKGATSGLVQKVVE+RIDDDQDAVWLRVN+ GGASCHVGYRSCFYRSVPVG +G V L FEE+EKVFDPKAVYGDAPNPTQL
Sbjct:    1 MSNQEQIQFSARKTVEQVEESDELAPKFDEYGLIPVVTTDASSGEVLMHGYMNEEAFRKTVALGEAVYWSRSRKCLWHKGATSGLVQKVVEMRIDDDQDAVWLRVNVNGGASCHVGYRSCFYRSVPVGASGTVSLNFEETEKVFDPKAVYGDAPNPTQL 159          
BLAST of mRNA_P-wetherbeei_contig1687.1.1 vs. uniprot
Match: A0A848W7S7_9PROT (Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W7S7_9PROT)

HSP 1 Score: 244 bits (622), Expect = 1.990e-80
Identity = 118/158 (74.68%), Postives = 131/158 (82.91%), Query Frame = 1
Query:   25 FAPRLSVEQVEESTELAPKFDERGLIPVVTTDAASGEVLMHGYMNAQAFRETVARGEAVYWSRSRQALWHKGATSGLVQKVVEIRIDDDQDAVWLRVNLIGGASCHVGYRSCFYRSVPVGGAGD-------VKLQFEESEKVFDPKAVYGDAPNPTQL 477
            FAPR S+EQVEE  ELAPKFD  GL+PVVTTDA SGEVLMHGYMNA+A  +T+  GEA YWSRSRQALWHKGATSGL+QK+VEIRIDDDQDAVWLR ++ GGASCHVGYRSCF+RSVP+G  G         KL FEE+EKVFDP  VYGDAPNPT+L
Sbjct:    9 FAPRESIEQVEEGDELAPKFDANGLLPVVTTDATSGEVLMHGYMNAEALEKTIQTGEAHYWSRSRQALWHKGATSGLIQKIVEIRIDDDQDAVWLRADVQGGASCHVGYRSCFFRSVPIGDGGGGEAAGAPTKLNFEETEKVFDPVEVYGDAPNPTKL 166          
BLAST of mRNA_P-wetherbeei_contig1687.1.1 vs. uniprot
Match: A0A2D9WGE3_9PROT (Phosphoribosyl-AMP cyclohydrolase n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A2D9WGE3_9PROT)

HSP 1 Score: 243 bits (619), Expect = 4.810e-80
Identity = 114/153 (74.51%), Postives = 132/153 (86.27%), Query Frame = 1
Query:   25 FAPRLSVEQVEESTELAPKFDERGLIPVVTTDAASGEVLMHGYMNAQAFRETVARGEAVYWSRSRQALWHKGATSGLVQKVVEIRIDDDQDAVWLRVNLIGGASCHVGYRSCFYRSVPVGGAGD--VKLQFEESEKVFDPKAVYGDAPNPTQL 477
            F+PR+S+EQVEE  ELAPKF+E GLIPVVTTDA SGEVLMHGYMN +A  +T+  GEA YWSRSRQ+LWHKGATSGL+QK++EIRIDDDQDAVWLR  + GGASCHVGYRSCF+RSVP+G   +   KL +EE+EKVFDPK VYGDAPNPT+L
Sbjct:    9 FSPRISIEQVEEGNELAPKFNEDGLIPVVTTDAISGEVLMHGYMNTEALEKTILTGEAYYWSRSRQSLWHKGATSGLIQKIIEIRIDDDQDAVWLRAEVNGGASCHVGYRSCFFRSVPIGDNSNNAKKLNYEETEKVFDPKEVYGDAPNPTKL 161          
BLAST of mRNA_P-wetherbeei_contig1687.1.1 vs. uniprot
Match: A0A4V5LVZ1_9GAMM (Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Sinimarinibacterium sp. CAU 1509 TaxID=2562283 RepID=A0A4V5LVZ1_9GAMM)

HSP 1 Score: 241 bits (615), Expect = 1.770e-79
Identity = 115/155 (74.19%), Postives = 133/155 (85.81%), Query Frame = 1
Query:   16 ELRFAPRLSVEQVEESTELAPKFDERGLIPVVTTDAASGEVLMHGYMNAQAFRETVARGEAVYWSRSRQALWHKGATSGLVQKVVEIRIDDDQDAVWLRVNLIGGASCHVGYRSCFYRSVPVGGAGDVK-LQFEESEKVFDPKAVYGDAPNPTQL 477
            ++ F PR+S+EQVEE  ELAPKFDE GLIP VTT A SGEVLM GYMNA+A + T+A GEA YWSRSRQ LWHKGATSGLVQKVVE+R+DDDQDA+WLRV+++G ASCHVG+RSCFYRSVPVG   DV+ L FEE+EK FDPK +YGDAPNPT+L
Sbjct:    4 DIHFFPRVSIEQVEEGKELAPKFDEEGLIPCVTTAAQSGEVLMLGYMNAEALKRTIATGEAHYWSRSRQVLWHKGATSGLVQKVVELRVDDDQDAIWLRVDVVGDASCHVGFRSCFYRSVPVGTGPDVRELAFEEAEKTFDPKEIYGDAPNPTKL 158          
BLAST of mRNA_P-wetherbeei_contig1687.1.1 vs. uniprot
Match: A0A3C1R1W8_9PLAN (Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C1R1W8_9PLAN)

HSP 1 Score: 240 bits (613), Expect = 3.940e-79
Identity = 116/155 (74.84%), Postives = 128/155 (82.58%), Query Frame = 1
Query:   25 FAPRLSVEQVEESTELAPKFDERGLIPVVTTDAASGEVLMHGYMNAQAFRETVARGEAVYWSRSRQALWHKGATSGLVQKVVEIRIDDDQDAVWLRVNLIGGASCHVGYRSCFYRSVPVG----GAGDVKLQFEESEKVFDPKAVYGDAPNPTQL 477
            F PR S+EQVEE TE APKFD +GLIPVVTTD  SGE+LMHGYMNA+A R T+  GEAVYWSRSRQ LWHKGATSGL+QKV E+RIDDDQD +WLRV + GGASCHVGYRSCFYR VPVG    G    +L+F ESEKVFDP +VYGDAPNPTQL
Sbjct:    7 FLPRTSIEQVEEGTEFAPKFDAQGLIPVVTTDWTSGELLMHGYMNAEAVRRTIELGEAVYWSRSRQVLWHKGATSGLIQKVREMRIDDDQDTIWLRVEVTGGASCHVGYRSCFYRRVPVGTEATGQSTPRLEFMESEKVFDPTSVYGDAPNPTQL 161          
BLAST of mRNA_P-wetherbeei_contig1687.1.1 vs. uniprot
Match: A0A2S6QL11_9PROT (Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha12_Bin1 TaxID=2013107 RepID=A0A2S6QL11_9PROT)

HSP 1 Score: 240 bits (612), Expect = 5.600e-79
Identity = 117/161 (72.67%), Postives = 136/161 (84.47%), Query Frame = 1
Query:    1 MENRNELRFAPRLSVEQVEESTELAPKFDERGLIPVVTTDAASGEVLMHGYMNAQAFRETVARGEAVYWSRSRQALWHKGATSGLVQKVVEIRIDDDQDAVWLRVNLIGGASCHVGYRSCFYRSVPVGGAGDV--KLQFEESEKVFDPKAVYGDAPNPTQL 477
            M  +N   F  R S++QVEE  ELAPKFDE+GL+PVVTTDA++GEVLMHGYMN +A  +T+  GEA YWSRSRQ LWHKGATSGL+Q+VVEIRIDDDQDAVWLRVN+ GGASCHVGYRSCF+RSVP+G   +   KL+FEE+EKVFDPK VYGDAPNPT+L
Sbjct:    1 MATKNTNFFVLRKSIKQVEEGDELAPKFDEKGLLPVVTTDASTGEVLMHGYMNNEALEKTIVSGEAYYWSRSRQDLWHKGATSGLIQEVVEIRIDDDQDAVWLRVNVKGGASCHVGYRSCFFRSVPIGENKESPKKLKFEETEKVFDPKEVYGDAPNPTKL 161          
BLAST of mRNA_P-wetherbeei_contig1687.1.1 vs. uniprot
Match: A0A6C1SRC2_9PROT (Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6C1SRC2_9PROT)

HSP 1 Score: 239 bits (611), Expect = 6.500e-79
Identity = 118/154 (76.62%), Postives = 130/154 (84.42%), Query Frame = 1
Query:   25 FAPRLSVEQVEESTELAPKFDERGLIPVVTTDAASGEVLMHGYMNAQAFRETVARGEAVYWSRSRQALWHKGATSGLVQKVVEIRIDDDQDAVWLRVNLIGGASCHVGYRSCFYRSVPVGG---AGDVKLQFEESEKVFDPKAVYGDAPNPTQL 477
            FA R+SV QVEE  ELAP+FD  GLIPVVTTDA +GEVLMH YMNAQA  +T+ +GEA YWSRSRQ LWHKGATSGLVQKVVEIRIDDDQDAVWLRV ++G ASCHVGYRSCFYR+VPVG    A  VKL F E+ KVFDP+AVYGDAPNPT+L
Sbjct:    2 FAQRISVAQVEEGDELAPRFDADGLIPVVTTDADTGEVLMHAYMNAQALEQTIRQGEAFYWSRSRQCLWHKGATSGLVQKVVEIRIDDDQDAVWLRVRVVGDASCHVGYRSCFYRAVPVGEGEPAAPVKLTFRETAKVFDPEAVYGDAPNPTRL 155          
BLAST of mRNA_P-wetherbeei_contig1687.1.1 vs. uniprot
Match: A0A1I2IH78_9GAMM (Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Fontimonas thermophila TaxID=1076937 RepID=A0A1I2IH78_9GAMM)

HSP 1 Score: 239 bits (610), Expect = 1.170e-78
Identity = 117/155 (75.48%), Postives = 134/155 (86.45%), Query Frame = 1
Query:   16 ELRFAPRLSVEQVEESTELAPKFDERGLIPVVTTDAASGEVLMHGYMNAQAFRETVARGEAVYWSRSRQALWHKGATSGLVQKVVEIRIDDDQDAVWLRVNLIGGASCHVGYRSCFYRSVPVGGAGDVK-LQFEESEKVFDPKAVYGDAPNPTQL 477
            E+RF  R+SVEQVEE  ELAPKFDE GLIP VTT A +GEVLM GYMNA+A + T+  GEA YWSRSRQ LWHKGATSGLVQKVVE+RIDDDQDAVWL+V+++G ASCHVG+RSCFYRSVPVG   +V+ L+FEE+EK FDPKAVYGDAPNPT+L
Sbjct:    8 EVRFFKRVSVEQVEEGHELAPKFDEHGLIPCVTTAAKTGEVLMLGYMNAEALKRTIVTGEAHYWSRSRQVLWHKGATSGLVQKVVELRIDDDQDAVWLKVDVVGDASCHVGFRSCFYRSVPVGPGPEVRPLRFEETEKTFDPKAVYGDAPNPTKL 162          
BLAST of mRNA_P-wetherbeei_contig1687.1.1 vs. uniprot
Match: A0A2E9XZK8_9PROT (Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9XZK8_9PROT)

HSP 1 Score: 238 bits (608), Expect = 1.930e-78
Identity = 118/156 (75.64%), Postives = 137/156 (87.82%), Query Frame = 1
Query:   19 LRFAPRLSVEQVEESTELAPKFDERGLIPVVTTDAASGEVLMHGYMNAQAFRETVARGEAVYWSRSRQALWHKGATSGLVQKVVEIRIDDDQDAVWLRVNLIGGASCHVGYRSCFYRSVPVGGA--GDV-KLQFEESEKVFDPKAVYGDAPNPTQL 477
            +RFA R S+EQVEE  +LAPKFD  GL+PVVT+DAASGE+LMHGYMN +A R T+  GEA Y+SRSRQ +WHKGATSGLVQKVVE+RIDDDQD+VWLRV++ GGASCHVGYRSCFYRSVP+G +  G V +LQFEE+EKVFDPKAVYGDAPNPT+L
Sbjct:    1 MRFAARRSIEQVEEGFDLAPKFDADGLLPVVTSDAASGEMLMHGYMNGEALRLTIETGEAHYYSRSRQVIWHKGATSGLVQKVVEMRIDDDQDSVWLRVDVAGGASCHVGYRSCFYRSVPLGPSQSGAVPRLQFEETEKVFDPKAVYGDAPNPTKL 156          
BLAST of mRNA_P-wetherbeei_contig1687.1.1 vs. uniprot
Match: A0A1V5G3T5_9BACT (Phosphoribosyl-AMP cyclohydrolase n=1 Tax=candidate division BRC1 bacterium ADurb.BinA364 TaxID=1852825 RepID=A0A1V5G3T5_9BACT)

HSP 1 Score: 237 bits (604), Expect = 8.380e-78
Identity = 118/153 (77.12%), Postives = 127/153 (83.01%), Query Frame = 1
Query:   25 FAPRLSVEQVEESTELAPKFDERGLIPVVTTDAASGEVLMHGYMNAQAFRETVARGEAVYWSRSRQALWHKGATSGLVQKVVEIRIDDDQDAVWLRVNLIGGASCHVGYRSCFYRSVPVGGAGD--VKLQFEESEKVFDPKAVYGDAPNPTQL 477
            F PR SVEQVEE  ELAPKFDE GLIPVVTTD ASGEVLMH YMNA+A  +T+  GEAVYWSRSRQ LWHKGATSGL Q V E+RIDDDQD VWLRV++ GGASCHVGYRSCFYR+VPVG A    + L F ESEKVFDPK VYGDAPNPT+L
Sbjct:    6 FFPRASVEQVEEGVELAPKFDEHGLIPVVTTDYASGEVLMHAYMNAEALAKTIELGEAVYWSRSRQTLWHKGATSGLTQIVREMRIDDDQDTVWLRVDVQGGASCHVGYRSCFYRAVPVGEAAQRGMALTFTESEKVFDPKKVYGDAPNPTKL 158          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1687.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D3UHF9_9PROT3.380e-9182.39Phosphoribosyl-AMP cyclohydrolase n=4 Tax=Alphapro... [more]
A0A848W7S7_9PROT1.990e-8074.68Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Alphapro... [more]
A0A2D9WGE3_9PROT4.810e-8074.51Phosphoribosyl-AMP cyclohydrolase n=2 Tax=Rhodospi... [more]
A0A4V5LVZ1_9GAMM1.770e-7974.19Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Sinimari... [more]
A0A3C1R1W8_9PLAN3.940e-7974.84Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Planctom... [more]
A0A2S6QL11_9PROT5.600e-7972.67Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Alphapro... [more]
A0A6C1SRC2_9PROT6.500e-7976.62Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Rhodospi... [more]
A0A1I2IH78_9GAMM1.170e-7875.48Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Fontimon... [more]
A0A2E9XZK8_9PROT1.930e-7875.64Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Rhodospi... [more]
A0A1V5G3T5_9BACT8.380e-7877.12Phosphoribosyl-AMP cyclohydrolase n=1 Tax=candidat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1687contigP-wetherbeei_contig1687:349..828 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog935848.JAEN01000008_gene571
Preferred namehisI
PFAMsPRA-CH,PRA-PH
Model size480
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00002,RC01055
KEGG koko:K01496,ko:K11755
KEGG ReactionR04035,R04037
KEGG Pathwayko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230
KEGG ModuleM00026
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.46e-79
EggNOG OGsCOG0139@1|root,COG0139@2|Bacteria,1MW67@1224|Proteobacteria,2UCKH@28211|Alphaproteobacteria,2PYKC@265|Paracoccus
EC3.5.4.19,3.6.1.31
DescriptionPhosphoribosyl-AMP cyclohydrolase
Cds size480
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186100.2957525-CDS-P-wetherbeei_contig1687:348..8281683186100.2957525-CDS-P-wetherbeei_contig1687:348..828Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1687 349..828 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1687.1.1prot_P-wetherbeei_contig1687.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1687 349..828 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1687.1.1

>prot_P-wetherbeei_contig1687.1.1 ID=prot_P-wetherbeei_contig1687.1.1|Name=mRNA_P-wetherbeei_contig1687.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=160bp
MENRNELRFAPRLSVEQVEESTELAPKFDERGLIPVVTTDAASGEVLMHG
YMNAQAFRETVARGEAVYWSRSRQALWHKGATSGLVQKVVEIRIDDDQDA
VWLRVNLIGGASCHVGYRSCFYRSVPVGGAGDVKLQFEESEKVFDPKAVY
GDAPNPTQL*
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mRNA from alignment at P-wetherbeei_contig1687:349..828+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1687.1.1 ID=mRNA_P-wetherbeei_contig1687.1.1|Name=mRNA_P-wetherbeei_contig1687.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=480bp|location=Sequence derived from alignment at P-wetherbeei_contig1687:349..828+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAAAACCGTAACGAGCTTCGCTTTGCGCCCCGCCTCTCGGTAGAGCA GGTCGAAGAAAGCACTGAGCTGGCCCCGAAATTTGACGAACGGGGGCTGA TCCCGGTTGTAACAACCGATGCCGCAAGCGGCGAAGTTCTGATGCATGGT TATATGAACGCGCAGGCCTTTCGCGAAACAGTGGCGCGCGGCGAAGCCGT TTACTGGAGCCGCAGCCGTCAGGCGTTGTGGCATAAGGGCGCGACCAGCG GCCTGGTCCAGAAAGTTGTCGAAATCCGCATTGATGATGACCAGGACGCG GTGTGGCTGCGGGTCAATCTGATTGGCGGTGCAAGCTGCCATGTCGGCTA TCGTTCCTGTTTTTACCGTTCTGTTCCGGTTGGCGGCGCGGGCGATGTGA AGCTGCAATTTGAAGAAAGCGAAAAAGTTTTTGACCCGAAAGCCGTGTAT GGGGATGCACCTAATCCAACCCAGTTGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1687:349..828+

>mRNA_P-wetherbeei_contig1687.1.1 ID=mRNA_P-wetherbeei_contig1687.1.1|Name=mRNA_P-wetherbeei_contig1687.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=480bp|location=Sequence derived from alignment at P-wetherbeei_contig1687:349..828+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAAAACCGTAACGAGCTTCGCTTTGCGCCCCGCCTCTCGGTAGAGCA
GGTCGAAGAAAGCACTGAGCTGGCCCCGAAATTTGACGAACGGGGGCTGA
TCCCGGTTGTAACAACCGATGCCGCAAGCGGCGAAGTTCTGATGCATGGT
TATATGAACGCGCAGGCCTTTCGCGAAACAGTGGCGCGCGGCGAAGCCGT
TTACTGGAGCCGCAGCCGTCAGGCGTTGTGGCATAAGGGCGCGACCAGCG
GCCTGGTCCAGAAAGTTGTCGAAATCCGCATTGATGATGACCAGGACGCG
GTGTGGCTGCGGGTCAATCTGATTGGCGGTGCAAGCTGCCATGTCGGCTA
TCGTTCCTGTTTTTACCGTTCTGTTCCGGTTGGCGGCGCGGGCGATGTGA
AGCTGCAATTTGAAGAAAGCGAAAAAGTTTTTGACCCGAAAGCCGTGTAT
GGGGATGCACCTAATCCAACCCAGTTGTGA
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