prot_P-wetherbeei_contig1686.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1686.1.1
Unique Nameprot_P-wetherbeei_contig1686.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length195
Homology
BLAST of mRNA_P-wetherbeei_contig1686.1.1 vs. uniprot
Match: A0A6H5KLM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLM8_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 9.790e-88
Identity = 143/199 (71.86%), Postives = 163/199 (81.91%), Query Frame = 0
Query:    1 LAALDAVAVAELRAELGVTVEG------SDVPRPIRGFVQAGFDDTMLAEIARLGLEAPTPIQAQALPVALSGRDMIGVAKTGSGKTFAFVLPMLVHVMDQRVIAAG-DGPIAVVLAPTRELAGQIYAEARKFAKKYDAKVCAVFGGAGKWEMQKALKEGPEVVVATPGRMIEMIKTKATNLRRCTMVVLDEADRMFDM 192
            +A L+A  V +LR EL V+VE       + VP P++ F  AGFDD +L+E+ R G EAPTPIQAQALPV +SGRDMIGVA+TGSGKT AFV P LVH+MDQR I  G +GPI V+LAPTRELAGQIY EA KFAK+Y  KVCAV+GGAGKWEMQKALKEGPE+VVATPGRMIEMIK KATN+RRCTM+VLDEADRMFDM
Sbjct:  232 MAKLNAWEVKQLRNELQVSVEAGKQRNDTGVPAPVQSFKHAGFDDLLLSEVVRQGFEAPTPIQAQALPVVMSGRDMIGVAQTGSGKTLAFVWPSLVHLMDQREIVKGKEGPIVVILAPTRELAGQIYTEANKFAKRYGCKVCAVYGGAGKWEMQKALKEGPEIVVATPGRMIEMIKLKATNMRRCTMMVLDEADRMFDM 430          
BLAST of mRNA_P-wetherbeei_contig1686.1.1 vs. uniprot
Match: D7G1S4_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S4_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 5.340e-85
Identity = 141/199 (70.85%), Postives = 164/199 (82.41%), Query Frame = 0
Query:    1 LAALDAVAVAELRAELGVTVEG------SDVPRPIRGFVQAGFDDTMLAEIARLGLEAPTPIQAQALPVALSGRDMIGVAKTGSGKTFAFVLPMLVHVMDQRVIAAG-DGPIAVVLAPTRELAGQIYAEARKFAKKYDAKVCAVFGGAGKWEMQKALKEGPEVVVATPGRMIEMIKTKATNLRRCTMVVLDEADRMFDM 192
            +A L+A  V +LR EL V+VE       + VP P++ F  AGFDD +L+E+ R G EAPTPIQAQALPV +SGRDMIGVA+TGSGKT AFV P LVH+MDQR I  G +GPI V+LAPTRELAGQIY+EA KFAK+Y  KVCAV+GGAGKWEMQKALKEGPE+VVATPGRMIEMIK K+TN+RRCTM++LDEADRMFDM
Sbjct:  150 MARLNAWEVKQLRNELQVSVEAGKQRNDTGVPAPVQSFKHAGFDDLLLSEVVRQGFEAPTPIQAQALPVVMSGRDMIGVAQTGSGKTLAFVWPSLVHLMDQREIVRGQEGPIVVILAPTRELAGQIYSEANKFAKRYGCKVCAVYGGAGKWEMQKALKEGPEIVVATPGRMIEMIKLKSTNMRRCTMMILDEADRMFDM 348          
BLAST of mRNA_P-wetherbeei_contig1686.1.1 vs. uniprot
Match: A0A7S3UTY6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTY6_HETAK)

HSP 1 Score: 250 bits (638), Expect = 7.690e-79
Identity = 129/186 (69.35%), Postives = 149/186 (80.11%), Query Frame = 0
Query:    8 AVAELRAELGVTVEGSD-VPRPIRGFVQAGFDDTMLAEIARLGLEAPTPIQAQALPVALSGRDMIGVAKTGSGKTFAFVLPMLVHVMDQRVIAAGDGPIAVVLAPTRELAGQIYAEARKFAKKYDAKVCAVFGGAGKWEMQKALKEGPEVVVATPGRMIEMIKTKATNLRRCTMVVLDEADRMFDM 192
            AV  LR+ L   VEG+  +PRP+  F  AG D  +   IARLGLE PTPIQAQALPVAL GRD+IG+AKTGSGKT+AF  P+L H +DQR I  G+GPIAV+L+PTRELA QIYAE +KFAK   AKVCA+ GGAGK+EMQK LK GPEVVVATPGR+IEMIK KATN+RRCT+ VLDEADRMF+M
Sbjct:    3 AVRALRSRLECQVEGAGPLPRPLPSFRHAGLDPKLAQTIARLGLENPTPIQAQALPVALGGRDLIGIAKTGSGKTYAFAWPVLTHALDQRYIEKGEGPIAVILSPTRELASQIYAEVKKFAKPLGAKVCALIGGAGKYEMQKELKTGPEVVVATPGRLIEMIKCKATNMRRCTICVLDEADRMFEM 188          
BLAST of mRNA_P-wetherbeei_contig1686.1.1 vs. uniprot
Match: A0A3R7JAY7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JAY7_9STRA)

HSP 1 Score: 238 bits (607), Expect = 1.090e-74
Identity = 122/191 (63.87%), Postives = 146/191 (76.44%), Query Frame = 0
Query:    2 AALDAVAVAELRAELGVTVEGSDVPRPIRGFVQAGFDDTMLAEIARLGLEAPTPIQAQALPVALSGRDMIGVAKTGSGKTFAFVLPMLVHVMDQRVIAAGDGPIAVVLAPTRELAGQIYAEARKFAKKYDAKVCAVFGGAGKWEMQKALKEGPEVVVATPGRMIEMIKTKATNLRRCTMVVLDEADRMFDM 192
            A L    V  LR EL V V+G+DVP P+R F+  GFD  ML+ I +LGLEAPT IQAQA PVAL+GRD+IG+AKTGSGKT AF LPM+ HVMDQR +  G+GPIAVVLAPTRELA Q Y +A+KF   Y A   A++GGAGKW+  +AL++G EVVVATPGR+IEMI+ KA  + R T VVLDEADRMF+M
Sbjct:   71 ATLSEQGVKRLRGELSVRVDGADVPAPVRSFMHLGFDKKMLSMIMKLGLEAPTAIQAQAFPVALTGRDLIGIAKTGSGKTLAFTLPMVRHVMDQRELQRGEGPIAVVLAPTRELAHQTYVQAKKFLGVYGASCAAIYGGAGKWDQVQALRKGVEVVVATPGRLIEMIRKKAAPMSRVTFVVLDEADRMFEM 261          
BLAST of mRNA_P-wetherbeei_contig1686.1.1 vs. uniprot
Match: D0NN87_PHYIT (DEAD/DEAH box RNA helicase, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NN87_PHYIT)

HSP 1 Score: 238 bits (607), Expect = 1.010e-73
Identity = 123/190 (64.74%), Postives = 145/190 (76.32%), Query Frame = 0
Query:    3 ALDAVAVAELRAELGVTVEGSDVPRPIRGFVQAGFDDTMLAEIARLGLEAPTPIQAQALPVALSGRDMIGVAKTGSGKTFAFVLPMLVHVMDQRVIAAGDGPIAVVLAPTRELAGQIYAEARKFAKKYDAKVCAVFGGAGKWEMQKALKEGPEVVVATPGRMIEMIKTKATNLRRCTMVVLDEADRMFDM 192
            AL A  VA LR+EL V V+G DVP P+R F+  G D  ML  + +LGLEAPT IQ QA PVALSGRD+IG+AKTGSGKT AF LPM+ HVMDQR +  G+GPIA+VLAPTRELA Q Y +A+KF   Y A   A++GGAGKWE  +ALK+G EVVVATPGR+IEMI+ KA  + R T VVLDEADRMF+M
Sbjct:   35 ALKAQEVANLRSELDVRVDGVDVPAPVRSFMHLGLDRKMLQTLMKLGLEAPTAIQTQAFPVALSGRDLIGIAKTGSGKTLAFTLPMVRHVMDQRELQRGEGPIALVLAPTRELAHQTYVQAKKFLAVYGASCAAIYGGAGKWEQVQALKKGVEVVVATPGRLIEMIRKKAAPMNRVTFVVLDEADRMFEM 224          
BLAST of mRNA_P-wetherbeei_contig1686.1.1 vs. uniprot
Match: A0A662X9K7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9K7_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.850e-73
Identity = 122/192 (63.54%), Postives = 146/192 (76.04%), Query Frame = 0
Query:    1 LAALDAVAVAELRAELGVTVEGSDVPRPIRGFVQAGFDDTMLAEIARLGLEAPTPIQAQALPVALSGRDMIGVAKTGSGKTFAFVLPMLVHVMDQRVIAAGDGPIAVVLAPTRELAGQIYAEARKFAKKYDAKVCAVFGGAGKWEMQKALKEGPEVVVATPGRMIEMIKTKATNLRRCTMVVLDEADRMFDM 192
            +AAL    +A LR EL V VEGS VP P+R F+  GFD  MLA + +LGLEAPT IQAQA PVAL+GRD+IG+AKTGSGKT AF LPM+ HVMDQR +  G+GPIAVVLAPTRELA Q + +A+KF   Y A   A++GG GKWE  +AL++G EVVVATPGR+IEMI+ K   + R T VVLDEADRMF+M
Sbjct:  183 IAALSNQEIAALRKELSVRVEGSAVPAPVRSFMHLGFDRKMLAMLMKLGLEAPTAIQAQAFPVALAGRDLIGIAKTGSGKTLAFTLPMVRHVMDQRELQRGEGPIAVVLAPTRELAHQTFVQAKKFLGIYGASCAAIYGGTGKWEQVQALRKGAEVVVATPGRLIEMIRKKTAPMSRVTFVVLDEADRMFEM 374          
BLAST of mRNA_P-wetherbeei_contig1686.1.1 vs. uniprot
Match: A0A835ZDT0_9STRA (Putative DEAD/DEAH box RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT0_9STRA)

HSP 1 Score: 235 bits (600), Expect = 1.950e-73
Identity = 118/144 (81.94%), Postives = 131/144 (90.97%), Query Frame = 0
Query:   49 GLEAPTPIQAQALPVALSGRDMIGVAKTGSGKTFAFVLPMLVHVMDQRVIAAGDGPIAVVLAPTRELAGQIYAEARKFAKKYDAKVCAVFGGAGKWEMQKALKEGPEVVVATPGRMIEMIKTKATNLRRCTMVVLDEADRMFDM 192
            GLEAPTPIQAQALPVALSGRD+IGVAKTGSGKTFAFV P+LVHVM QR I  G+GPIAV+L+PTRELA QI+ +A+KFAK+  A VCAVFGGAGKWEMQKAL+EGPE+VVATPGR+IEMIK KATNL RCT VVLDEADRMFD+
Sbjct:   34 GLEAPTPIQAQALPVALSGRDLIGVAKTGSGKTFAFVWPVLVHVMAQREIEDGEGPIAVILSPTRELATQIHGQAKKFAKQLGANVCAVFGGAGKWEMQKALREGPEIVVATPGRLIEMIKIKATNLARCTCVVLDEADRMFDL 177          
BLAST of mRNA_P-wetherbeei_contig1686.1.1 vs. uniprot
Match: W2R890_PHYPN (Uncharacterized protein n=17 Tax=Phytophthora TaxID=4783 RepID=W2R890_PHYPN)

HSP 1 Score: 245 bits (626), Expect = 3.110e-73
Identity = 124/190 (65.26%), Postives = 149/190 (78.42%), Query Frame = 0
Query:    3 ALDAVAVAELRAELGVTVEGSDVPRPIRGFVQAGFDDTMLAEIARLGLEAPTPIQAQALPVALSGRDMIGVAKTGSGKTFAFVLPMLVHVMDQRVIAAGDGPIAVVLAPTRELAGQIYAEARKFAKKYDAKVCAVFGGAGKWEMQKALKEGPEVVVATPGRMIEMIKTKATNLRRCTMVVLDEADRMFDM 192
            AL+A  VA +R+EL + VEG+DVP P+R F+  GFD  ML  + +LGLEAPT IQAQA PVALSGRD+IG+AKTGSGKT AF LPM+ HVMDQR +  G+GPIA+VLAPTRELA Q Y +A+KF   Y A   A++GGAGKWE  +ALK+G EVVVATPGR+IEMI+ KA  + R T VVLDEADRMF+M
Sbjct:  164 ALNAQEVASIRSELNIRVEGADVPAPVRSFMHLGFDKKMLQTLMKLGLEAPTAIQAQAFPVALSGRDLIGIAKTGSGKTLAFTLPMVRHVMDQRELQRGEGPIAIVLAPTRELAHQTYVQAKKFLAVYGASCAAIYGGAGKWEQVQALKKGVEVVVATPGRLIEMIRKKAAPMNRVTFVVLDEADRMFEM 353          
BLAST of mRNA_P-wetherbeei_contig1686.1.1 vs. uniprot
Match: A0A6A3JW76_9STRA (DEAD-box ATP-dependent RNA helicase 24 n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3JW76_9STRA)

HSP 1 Score: 242 bits (617), Expect = 1.580e-72
Identity = 124/191 (64.92%), Postives = 149/191 (78.01%), Query Frame = 0
Query:    2 AALDAVAVAELRAELGVTVEGSDVPRPIRGFVQAGFDDTMLAEIARLGLEAPTPIQAQALPVALSGRDMIGVAKTGSGKTFAFVLPMLVHVMDQRVIAAGDGPIAVVLAPTRELAGQIYAEARKFAKKYDAKVCAVFGGAGKWEMQKALKEGPEVVVATPGRMIEMIKTKATNLRRCTMVVLDEADRMFDM 192
            A+L +  VA+LR E+ V V+G DVP P+R F+  GFD  ML  + +LGLEAPT IQAQA PVALSGRD+IG+AKTGSGKT AF LPM+ HVMDQR +  G+GPIAVVLAPTRELA Q Y +A+KF   Y A   A++GGAGKWE  +ALK+G EVVVATPGR+IEMI+ KA  + R T+VVLDEADRMF+M
Sbjct:  163 ASLSSQEVAKLRLEMSVKVDGIDVPAPVRSFMHLGFDRKMLQTLMKLGLEAPTSIQAQAFPVALSGRDLIGIAKTGSGKTLAFTLPMVRHVMDQRELQRGEGPIAVVLAPTRELAHQTYVQAKKFLGVYGASCAAIYGGAGKWEQVQALKKGVEVVVATPGRLIEMIRKKAAPMNRVTLVVLDEADRMFEM 353          
BLAST of mRNA_P-wetherbeei_contig1686.1.1 vs. uniprot
Match: A0A6A3N251_9STRA (DEAD-box ATP-dependent RNA helicase 24 n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3N251_9STRA)

HSP 1 Score: 241 bits (614), Expect = 3.970e-72
Identity = 122/184 (66.30%), Postives = 145/184 (78.80%), Query Frame = 0
Query:    9 VAELRAELGVTVEGSDVPRPIRGFVQAGFDDTMLAEIARLGLEAPTPIQAQALPVALSGRDMIGVAKTGSGKTFAFVLPMLVHVMDQRVIAAGDGPIAVVLAPTRELAGQIYAEARKFAKKYDAKVCAVFGGAGKWEMQKALKEGPEVVVATPGRMIEMIKTKATNLRRCTMVVLDEADRMFDM 192
            VA+LR E+ V V+G DVP P+R F+  GFD  ML  + +LGLEAPT IQAQA PVALSGRD+IG+AKTGSGKT AF LPM+ HVMDQR +  G+GPIAVVLAPTRELA Q Y +A+KF   Y A   A++GGAGKWE  +ALK+G EVVVATPGR+IEMI+ KA  + R T+VVLDEADRMF+M
Sbjct:  165 VAKLRLEMSVKVDGVDVPAPVRSFMHLGFDRKMLQTLMKLGLEAPTSIQAQAFPVALSGRDLIGIAKTGSGKTLAFTLPMVRHVMDQRELQRGEGPIAVVLAPTRELAHQTYVQAKKFLGVYGASCAAIYGGAGKWEQVQALKKGVEVVVATPGRLIEMIRKKAAPMNRVTLVVLDEADRMFEM 348          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1686.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLM8_9PHAE9.790e-8871.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1S4_ECTSI5.340e-8570.85DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A7S3UTY6_HETAK7.690e-7969.35Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A3R7JAY7_9STRA1.090e-7463.87Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
D0NN87_PHYIT1.010e-7364.74DEAD/DEAH box RNA helicase, putative n=1 Tax=Phyto... [more]
A0A662X9K7_9STRA1.850e-7363.54Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A835ZDT0_9STRA1.950e-7381.94Putative DEAD/DEAH box RNA helicase n=1 Tax=Tribon... [more]
W2R890_PHYPN3.110e-7365.26Uncharacterized protein n=17 Tax=Phytophthora TaxI... [more]
A0A6A3JW76_9STRA1.580e-7264.92DEAD-box ATP-dependent RNA helicase 24 n=4 Tax=Phy... [more]
A0A6A3N251_9STRA3.970e-7266.30DEAD-box ATP-dependent RNA helicase 24 n=1 Tax=Phy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 49..194
e-value: 1.7E-24
score: 97.3
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 61..194
score: 23.505138
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 54..192
e-value: 7.0E-41
score: 139.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..194
e-value: 4.4E-66
score: 224.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..192
NoneNo IPR availablePANTHERPTHR24031:SF125ATP-DEPENDENT RNA HELICASE DDX42coord: 12..192
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 12..192
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 182..190
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 30..58
score: 9.241713

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1686contigP-wetherbeei_contig1686:218..1372 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1686.1.1mRNA_P-wetherbeei_contig1686.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1686 218..1372 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1686.1.1 ID=prot_P-wetherbeei_contig1686.1.1|Name=mRNA_P-wetherbeei_contig1686.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=195bp
LAALDAVAVAELRAELGVTVEGSDVPRPIRGFVQAGFDDTMLAEIARLGL
EAPTPIQAQALPVALSGRDMIGVAKTGSGKTFAFVLPMLVHVMDQRVIAA
GDGPIAVVLAPTRELAGQIYAEARKFAKKYDAKVCAVFGGAGKWEMQKAL
KEGPEVVVATPGRMIEMIKTKATNLRRCTMVVLDEADRMFDMVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif