mRNA_P-wetherbeei_contig1685.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1685.5.1
Unique NamemRNA_P-wetherbeei_contig1685.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1685.5.1 vs. uniprot
Match: A0A352KE89_9PROT (Molybdopterin synthase catalytic subunit n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KE89_9PROT)

HSP 1 Score: 233 bits (593), Expect = 2.120e-76
Identity = 113/149 (75.84%), Postives = 126/149 (84.56%), Query Frame = 1
Query:    1 MIKVQSEDFDLATEIAALTKGKTDIGGVVSFTGLVRAVSDGAKVATMTLEHYPGMTEKQLAAIEQDACARWPLSASLIIHRYGRLMPGEQIMAVVTASSHRQAAFEAAEFLVDWLKTKAPFWKLESDGGSETWVAARDSDDTAAGRWGK 447
            MI+VQ EDFDLA EIAALT G+T IGGVVSFTGLVR +S G +V+ MTLEHYPGMTEK+LA IE +ACARWPL A L+IHRYG L PGEQIMAVVTAS+HRQAAFEAAEFLVDWLKTKAPFWKLE+    ++WV A+ SDD AA RW K
Sbjct:    1 MIRVQREDFDLAAEIAALTAGRTGIGGVVSFTGLVRDISTGKQVSAMTLEHYPGMTEKELARIEAEACARWPLEACLLIHRYGTLQPGEQIMAVVTASAHRQAAFEAAEFLVDWLKTKAPFWKLEAGAEGDSWVEAQASDDAAAARWEK 149          
BLAST of mRNA_P-wetherbeei_contig1685.5.1 vs. uniprot
Match: A0A6B1HGI7_9PROT (Molybdopterin synthase catalytic subunit n=3 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6B1HGI7_9PROT)

HSP 1 Score: 209 bits (531), Expect = 6.300e-67
Identity = 103/151 (68.21%), Postives = 118/151 (78.15%), Query Frame = 1
Query:    1 MIKVQSEDFDLATEIAALTKGKTDIGGVVSFTGLVRAVSDG----AKVATMTLEHYPGMTEKQLAAIEQDACARWPLSASLIIHRYGRLMPGEQIMAVVTASSHRQAAFEAAEFLVDWLKTKAPFWKLESDGGSETWVAARDSDDTAAGRW 441
            MI+VQ EDFD   E AALT G+TDIGG+V+FTGLVR V D     A ++ MTLEHYPGMTEK LA IE +A ARWPL+ASLI+HRYGRL PG++I+ V TAS+HR AAFEA  FL+DWLKT+APFWKLE   G   WVAARDSDD AA RW
Sbjct:    1 MIRVQQEDFDPQAEAAALTAGRTDIGGIVTFTGLVREVIDNEGRPAAISAMTLEHYPGMTEKMLAEIEAEANARWPLAASLIVHRYGRLEPGDRIVFVATASAHRHAAFEANMFLIDWLKTRAPFWKLEDGKGGPAWVAARDSDDEAAERW 151          
BLAST of mRNA_P-wetherbeei_contig1685.5.1 vs. uniprot
Match: A0A7X2FUV2_9PROT (Molybdopterin synthase catalytic subunit n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2FUV2_9PROT)

HSP 1 Score: 207 bits (527), Expect = 3.330e-66
Identity = 99/149 (66.44%), Postives = 116/149 (77.85%), Query Frame = 1
Query:    1 MIKVQSEDFDLATEIAALTKGKTDIGGVVSFTGLVRAVSDGAKVATMTLEHYPGMTEKQLAAIEQDACARWPLSASLIIHRYGRLMPGEQIMAVVTASSHRQAAFEAAEFLVDWLKTKAPFWKLESDGGSETWVAARDSDDTAAGRWGK 447
            MI+VQSEDFD+  E+ ALT+GKT IGGV SFTGLVR ++ G  +  MTLEHYPGMTEKQL  IEQ+A  RWPL ASLIIHRYGRL PG++I+ V TAS+HRQAAF++  FL+DWLKTKAPFWKLE       WV A+ SDD AA RW +
Sbjct:    1 MIRVQSEDFDIGAELEALTRGKTSIGGVCSFTGLVRDIAGGEAIQGMTLEHYPGMTEKQLQEIEQEAHRRWPLDASLIIHRYGRLEPGDRIVMVATASAHRQAAFQSCNFLMDWLKTKAPFWKLEETPQGPQWVDAKASDDVAADRWAR 149          
BLAST of mRNA_P-wetherbeei_contig1685.5.1 vs. uniprot
Match: A0A2E6Q9G2_9PROT (Molybdopterin synthase catalytic subunit n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6Q9G2_9PROT)

HSP 1 Score: 206 bits (524), Expect = 7.580e-66
Identity = 97/149 (65.10%), Postives = 116/149 (77.85%), Query Frame = 1
Query:    4 IKVQSEDFDLATEIAALTKGKTDIGGVVSFTGLVRAVSDGAKVATMTLEHYPGMTEKQLAAIEQDACARWPLSASLIIHRYGRLMPGEQIMAVVTASSHRQAAFEAAEFLVDWLKTKAPFWKLESDGGSETWVAARDSDDTAAGRWGKK 450
            ++VQ+EDFD+  E+AALT G+ DIGG+VSFTGLVR +     V  MTLEHYPGMTEK L+ IE +AC RWP++AS+I+HRYGRL PG++I+ V TAS+HR+AAFEA EFLVDWLKTKAPFWKLE       WVAAR  DD AA RW  K
Sbjct:    3 VRVQTEDFDVGAELAALTDGRHDIGGLVSFTGLVRDLGGEQAVQAMTLEHYPGMTEKMLSEIEAEACNRWPITASVIVHRYGRLTPGDRIVLVATASAHRRAAFEACEFLVDWLKTKAPFWKLEEGDEGAEWVAARAEDDAAAERWSAK 151          
BLAST of mRNA_P-wetherbeei_contig1685.5.1 vs. uniprot
Match: A0A2D8RWF5_9HYPH (Molybdopterin synthase catalytic subunit n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2D8RWF5_9HYPH)

HSP 1 Score: 206 bits (523), Expect = 9.130e-66
Identity = 100/147 (68.03%), Postives = 120/147 (81.63%), Query Frame = 1
Query:    1 MIKVQSEDFDLATEIAALTKGKTDIGGVVSFTGLVRAVSDGAKVATMTLEHYPGMTEKQLAAIEQDACARWPLSASLIIHRYGRLMPGEQIMAVVTASSHRQAAFEAAEFLVDWLKTKAPFWKLESDGGSETWVAARDSDDTAAGRW 441
            MI+VQ+EDFD+ TE+AALTKG+TDIG +V+F+GLVR  +DG  VA+M LEHYPGMTEK+LA IEQ+A  RWPL ASLIIHR G+LMPG+ I+ VVTAS HRQAAFEAA FL+D+LKT+APFWK E   G   WV AR+SD  AA +W
Sbjct:    1 MIRVQAEDFDIGTEVAALTKGRTDIGALVTFSGLVRDANDGT-VASMELEHYPGMTEKELARIEQEANERWPLQASLIIHRVGKLMPGDNIVLVVTASPHRQAAFEAASFLMDYLKTRAPFWKREDKNGEAHWVDARESDGDAAAKW 146          
BLAST of mRNA_P-wetherbeei_contig1685.5.1 vs. uniprot
Match: A0A839SUE0_9HYPH (Molybdopterin synthase catalytic subunit n=1 Tax=Limibacillus halophilus TaxID=1579333 RepID=A0A839SUE0_9HYPH)

HSP 1 Score: 204 bits (519), Expect = 4.820e-65
Identity = 99/150 (66.00%), Postives = 113/150 (75.33%), Query Frame = 1
Query:    1 MIKVQSEDFDLATEIAALTKGKTDIGGVVSFTGLVRAVSDGAKVATMTLEHYPGMTEKQLAAIEQDACARWPLSASLIIHRYGRLMPGEQIMAVVTASSHRQAAFEAAEFLVDWLKTKAPFWKLESDGGSETWVAARDSDDTAAGRWGKK 450
            MI+VQ+EDFDL  E+AALT G   IGG+  F GLVR ++ G  +A MTLEHYPGMTEK LA IE +A  RWPL ASLIIHRYGRL PG+QI+ V TAS HR+AAFEA  FL+DWLKT+APFWKLE  G    WV ARDSDD A  RW K+
Sbjct:    1 MIRVQAEDFDLGREMAALTAGNHRIGGLCVFVGLVRDMASGEGIAAMTLEHYPGMTEKMLAKIEAEAKDRWPLEASLIIHRYGRLEPGDQIVLVATASPHREAAFEACHFLIDWLKTQAPFWKLEDKGSGAAWVEARDSDDAAVQRWRKE 150          
BLAST of mRNA_P-wetherbeei_contig1685.5.1 vs. uniprot
Match: A0A418W1G7_9PROT (Molybdopterin synthase catalytic subunit n=2 Tax=Azospirillum TaxID=191 RepID=A0A418W1G7_9PROT)

HSP 1 Score: 204 bits (518), Expect = 5.630e-65
Identity = 96/146 (65.75%), Postives = 116/146 (79.45%), Query Frame = 1
Query:    4 IKVQSEDFDLATEIAALTKGKTDIGGVVSFTGLVRAVSDGAKVATMTLEHYPGMTEKQLAAIEQDACARWPLSASLIIHRYGRLMPGEQIMAVVTASSHRQAAFEAAEFLVDWLKTKAPFWKLESDGGSETWVAARDSDDTAAGRW 441
            I+VQ+EDFD+  E AALT+G++ IGGV  F+GLVR ++ GA V+ MTLEHYPGMTEKQL AIE +A  RWPL   LIIHRYGRL PG+QI+ V TAS+HR AAF++  FL+DWLKTKAPFWKLE+    E WV A+DSDD+AA RW
Sbjct:    3 IRVQAEDFDVGAEYAALTRGRSSIGGVTLFSGLVRDMAGGAAVSAMTLEHYPGMTEKQLEAIEAEARRRWPLDDVLIIHRYGRLEPGDQIVLVATASAHRDAAFDSCRFLIDWLKTKAPFWKLEATPDGERWVEAKDSDDSAAARW 148          
BLAST of mRNA_P-wetherbeei_contig1685.5.1 vs. uniprot
Match: A0A0P0EXV5_AZOBR (Molybdopterin synthase catalytic subunit n=25 Tax=Azospirillaceae TaxID=2829815 RepID=A0A0P0EXV5_AZOBR)

HSP 1 Score: 204 bits (518), Expect = 6.010e-65
Identity = 95/148 (64.19%), Postives = 116/148 (78.38%), Query Frame = 1
Query:    4 IKVQSEDFDLATEIAALTKGKTDIGGVVSFTGLVRAVSDGAKVATMTLEHYPGMTEKQLAAIEQDACARWPLSASLIIHRYGRLMPGEQIMAVVTASSHRQAAFEAAEFLVDWLKTKAPFWKLESDGGSETWVAARDSDDTAAGRWGK 447
            +KVQ EDFD+  E+AA+T GKT IGGV  F GLVR ++ G  V+ MTLEHYPGMTE+QL AIE +A ARWPL  +LIIHRYGRL PG++I+ V TAS+HR+AAFE+  FL+DWLKT+APFWK+E+    E WV A+DSDD AA RW K
Sbjct:    3 VKVQGEDFDVGAELAAMTGGKTGIGGVTLFVGLVRDMAGGESVSAMTLEHYPGMTERQLEAIEAEARARWPLDDALIIHRYGRLEPGDRIVLVATASAHREAAFESCHFLIDWLKTRAPFWKMEATPEGERWVEAKDSDDAAAARWTK 150          
BLAST of mRNA_P-wetherbeei_contig1685.5.1 vs. uniprot
Match: A0A154W853_9PROT (Molybdopterin synthase catalytic subunit n=1 Tax=Oceanibaculum pacificum TaxID=580166 RepID=A0A154W853_9PROT)

HSP 1 Score: 203 bits (517), Expect = 8.530e-65
Identity = 99/149 (66.44%), Postives = 118/149 (79.19%), Query Frame = 1
Query:    1 MIKVQSEDFDLATEIAALTKGKTDIGGVVSFTGLVRAVSDGAKVATMTLEHYPGMTEKQLAAIEQDACARWPLSASLIIHRYGRLMPGEQIMAVVTASSHRQAAFEAAEFLVDWLKTKAPFWKLESDGGSETWVAARDSDDTAAGRWGK 447
            MI+VQ EDFD+  EI+ALT G   IGGV  F GLVR ++ G  ++ MTLEHYPGMTEK+LA IE +A ARWPL ASLI+HRYGRL PGE+I+ VVTAS+HRQAAF+AA FL+D+LKTKAPFWKLE  GG   WV AR+SD++A  RW K
Sbjct:    1 MIRVQREDFDIGAEISALTAGNHAIGGVACFAGLVRDMAGGDDISAMTLEHYPGMTEKELARIEAEAQARWPLEASLIVHRYGRLGPGERIVLVVTASAHRQAAFDAAMFLMDFLKTKAPFWKLEDTGGDARWVDARESDESALERWRK 149          
BLAST of mRNA_P-wetherbeei_contig1685.5.1 vs. uniprot
Match: UPI001872261F (molybdenum cofactor biosynthesis protein MoaE n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI001872261F)

HSP 1 Score: 203 bits (517), Expect = 1.000e-64
Identity = 97/149 (65.10%), Postives = 115/149 (77.18%), Query Frame = 1
Query:    4 IKVQSEDFDLATEIAALTKGKTDIGGVVSFTGLVRAVSDGAKVATMTLEHYPGMTEKQLAAIEQDACARWPLSASLIIHRYGRLMPGEQIMAVVTASSHRQAAFEAAEFLVDWLKTKAPFWKLESDGGSETWVAARDSDDTAAGRWGKK 450
            ++VQ+EDFD+  E+A LT G   IGGV  F GLVR ++ G++++ MTLEHYP MTEK LA IE +A  RWPL ASLIIHR+GRL PG+QI+ V TAS+HRQAAFE+ EFL+DWLKTKAPFWKLE       WV ARDSDDTAA RW KK
Sbjct:    3 VRVQAEDFDVGKELAQLTNGNHAIGGVAVFVGLVRDLAGGSEISAMTLEHYPAMTEKMLAEIEAEATERWPLEASLIIHRFGRLEPGDQIVMVATASAHRQAAFESCEFLMDWLKTKAPFWKLEETDQGAQWVDARDSDDTAAARWVKK 151          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1685.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A352KE89_9PROT2.120e-7675.84Molybdopterin synthase catalytic subunit n=4 Tax=A... [more]
A0A6B1HGI7_9PROT6.300e-6768.21Molybdopterin synthase catalytic subunit n=3 Tax=R... [more]
A0A7X2FUV2_9PROT3.330e-6666.44Molybdopterin synthase catalytic subunit n=1 Tax=A... [more]
A0A2E6Q9G2_9PROT7.580e-6665.10Molybdopterin synthase catalytic subunit n=1 Tax=R... [more]
A0A2D8RWF5_9HYPH9.130e-6668.03Molybdopterin synthase catalytic subunit n=2 Tax=H... [more]
A0A839SUE0_9HYPH4.820e-6566.00Molybdopterin synthase catalytic subunit n=1 Tax=L... [more]
A0A418W1G7_9PROT5.630e-6565.75Molybdopterin synthase catalytic subunit n=2 Tax=A... [more]
A0A0P0EXV5_AZOBR6.010e-6564.19Molybdopterin synthase catalytic subunit n=25 Tax=... [more]
A0A154W853_9PROT8.530e-6566.44Molybdopterin synthase catalytic subunit n=1 Tax=O... [more]
UPI001872261F1.000e-6465.10molybdenum cofactor biosynthesis protein MoaE n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1685contigP-wetherbeei_contig1685:6245..6697 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1207063.P24_04290
Preferred namemoaE
PFAMsMoaE
Model size453
Max annot lvl204441|Rhodospirillales
KEGG rclassRC02507
KEGG koko:K03635
KEGG ReactionR09395
KEGG Pathwayko00790,ko01100,ko04122,map00790,map01100,map04122
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.99e-64
EggNOG OGsCOG0314@1|root,COG0314@2|Bacteria,1RGUX@1224|Proteobacteria,2U73K@28211|Alphaproteobacteria,2JS7M@204441|Rhodospirillales
EC2.8.1.12
DescriptionCOG0314 Molybdopterin converting factor, large subunit
Cds size453
COG categoryH
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186099.6247373-CDS-P-wetherbeei_contig1685:6244..66971683186099.6247373-CDS-P-wetherbeei_contig1685:6244..6697Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1685 6245..6697 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1685.5.1prot_P-wetherbeei_contig1685.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1685 6245..6697 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1685.5.1

>prot_P-wetherbeei_contig1685.5.1 ID=prot_P-wetherbeei_contig1685.5.1|Name=mRNA_P-wetherbeei_contig1685.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=151bp
MIKVQSEDFDLATEIAALTKGKTDIGGVVSFTGLVRAVSDGAKVATMTLE
HYPGMTEKQLAAIEQDACARWPLSASLIIHRYGRLMPGEQIMAVVTASSH
RQAAFEAAEFLVDWLKTKAPFWKLESDGGSETWVAARDSDDTAAGRWGKK
*
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mRNA from alignment at P-wetherbeei_contig1685:6245..6697-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1685.5.1 ID=mRNA_P-wetherbeei_contig1685.5.1|Name=mRNA_P-wetherbeei_contig1685.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig1685:6245..6697- (Phaeothamnion wetherbeei SAG_119_79)
ATGATAAAAGTTCAGTCCGAAGATTTTGATCTGGCAACTGAGATCGCCGC ACTGACCAAAGGCAAAACCGATATTGGCGGCGTTGTCAGTTTTACCGGGC TGGTGCGCGCTGTTTCCGATGGCGCAAAAGTTGCCACCATGACCCTGGAA CATTATCCCGGCATGACCGAAAAACAATTGGCGGCGATTGAACAGGATGC CTGTGCGCGCTGGCCGCTCAGTGCCTCGCTGATCATTCACCGTTACGGGC GGCTGATGCCTGGTGAACAGATCATGGCAGTGGTGACGGCATCGAGCCAC CGGCAGGCCGCGTTCGAGGCGGCGGAATTTCTGGTCGACTGGCTGAAAAC CAAAGCCCCGTTCTGGAAACTGGAAAGCGATGGGGGCAGTGAGACCTGGG TCGCCGCCCGCGACAGTGACGATACAGCAGCAGGGCGGTGGGGGAAGAAA TAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1685:6245..6697-

>mRNA_P-wetherbeei_contig1685.5.1 ID=mRNA_P-wetherbeei_contig1685.5.1|Name=mRNA_P-wetherbeei_contig1685.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig1685:6245..6697- (Phaeothamnion wetherbeei SAG_119_79)
ATGATAAAAGTTCAGTCCGAAGATTTTGATCTGGCAACTGAGATCGCCGC
ACTGACCAAAGGCAAAACCGATATTGGCGGCGTTGTCAGTTTTACCGGGC
TGGTGCGCGCTGTTTCCGATGGCGCAAAAGTTGCCACCATGACCCTGGAA
CATTATCCCGGCATGACCGAAAAACAATTGGCGGCGATTGAACAGGATGC
CTGTGCGCGCTGGCCGCTCAGTGCCTCGCTGATCATTCACCGTTACGGGC
GGCTGATGCCTGGTGAACAGATCATGGCAGTGGTGACGGCATCGAGCCAC
CGGCAGGCCGCGTTCGAGGCGGCGGAATTTCTGGTCGACTGGCTGAAAAC
CAAAGCCCCGTTCTGGAAACTGGAAAGCGATGGGGGCAGTGAGACCTGGG
TCGCCGCCCGCGACAGTGACGATACAGCAGCAGGGCGGTGGGGGAAGAAA
TAA
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