mRNA_P-wetherbeei_contig1685.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1685.3.1 vs. uniprot
Match: A0A351T2K5_9PROT (MarR family transcriptional regulator n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T2K5_9PROT) HSP 1 Score: 204 bits (520), Expect = 1.270e-64 Identity = 105/169 (62.13%), Postives = 134/169 (79.29%), Query Frame = 1
Query: 1 MADINNLYTVH-PPIETGDSAELRKAIELLFFAYRDSTSDADAILARTGYGRAHHRILYFVGAYPGINVAQLLSILRITKQSLGRVLKQLVKQEFVEQRAGKNDRRQRLLFLTPKGQAFEKQLSIPQQARVRRAFAASGPDAVAGYLSVLEHLIDEAERKAILDAIRHG 504
MADINN+ + + +S LR+AIELLFFAYRD T D D IL ++G+GRAHHR+L+F+GAYPGI+VAQLL IL+ITKQSL RVL+QLV++ FVEQR GK DRR+RLL+LTPKG+ FE+QL++PQ+ R R AFAA+G DAVAGY V+EHLI+ +R+ IL + G
Sbjct: 1 MADINNVKDSEGQTLHSSESERLRRAIELLFFAYRDFTGDPDEILQQSGFGRAHHRVLHFIGAYPGISVAQLLEILKITKQSLARVLRQLVQEGFVEQRMGKRDRRKRLLYLTPKGRQFERQLAMPQRERFRAAFAAAGDDAVAGYFKVIEHLINAQDRQIILQNFKRG 169
BLAST of mRNA_P-wetherbeei_contig1685.3.1 vs. uniprot
Match: A0A2A4VTC9_9PROT (MarR family transcriptional regulator n=1 Tax=Kordiimonadales bacterium TaxID=2030814 RepID=A0A2A4VTC9_9PROT) HSP 1 Score: 168 bits (426), Expect = 1.600e-50 Identity = 89/145 (61.38%), Postives = 110/145 (75.86%), Query Frame = 1
Query: 61 ELRKAIELLFFAYRDSTSDADAILARTGYGRAHHRILYFVGAYPGINVAQLLSILRITKQSLGRVLKQLVKQEFVEQRAGKNDRRQRLLFLTPKGQAFEKQLSIPQQARVRRAFAASGPDAVAGYLSVLEHLIDEAERKAILDAI 495
ELR+ IELL+FAYRD T D D ILA TG GRAHHR+LYFVG PG V+ LL +LRITKQSL RVL QLV ++EQ+AG DRRQRLL+LT KG AFEKQL Q+ RV +A+ +GP+AVAG+ VL ++++E ER+ +L AI
Sbjct: 16 ELRRGIELLYFAYRDFTQDPDKILADTGLGRAHHRVLYFVGRSPGTTVSGLLKLLRITKQSLSRVLGQLVDDGYIEQQAGMTDRRQRLLYLTEKGDAFEKQLFSTQRERVAQAYKTAGPEAVAGFWEVLLNIVNETERETVLRAI 160
BLAST of mRNA_P-wetherbeei_contig1685.3.1 vs. uniprot
Match: A0A6L4AYD5_9BACT (MarR family transcriptional regulator n=1 Tax=Thermoanaerobaculia bacterium TaxID=2651171 RepID=A0A6L4AYD5_9BACT) HSP 1 Score: 168 bits (426), Expect = 1.990e-50 Identity = 93/145 (64.14%), Postives = 109/145 (75.17%), Query Frame = 1
Query: 61 ELRKAIELLFFAYRDSTSDADAILARTGYGRAHHRILYFVGAYPGINVAQLLSILRITKQSLGRVLKQLVKQEFVEQRAGKNDRRQRLLFLTPKGQAFEKQLSIPQQARVRRAFAASGPDAVAGYLSVLEHLIDEAERKAILDAI 495
ELR+ IELLF+AYRD T+D DAIL R G+GRAHHR+L+FVG PGI +AQLL+ILRITKQSL RVL L+ +VEQR G DRRQR LFLT KGQA E++L QQARV RA+ +G +AVAGY VL LIDE +R IL I
Sbjct: 17 ELRQGIELLFYAYRDFTADPDAILERYGFGRAHHRVLHFVGRNPGITIAQLLAILRITKQSLSRVLGVLLTDAYVEQRQGLRDRRQRQLFLTEKGQALEEELRQVQQARVARAYREAGAEAVAGYRQVLAGLIDEEDRDRILKTI 161
BLAST of mRNA_P-wetherbeei_contig1685.3.1 vs. uniprot
Match: A0A8J7MAB0_9RHOB (MarR family transcriptional regulator n=1 Tax=Thermohalobaculum xanthum TaxID=2753746 RepID=A0A8J7MAB0_9RHOB) HSP 1 Score: 168 bits (425), Expect = 4.370e-50 Identity = 87/145 (60.00%), Postives = 109/145 (75.17%), Query Frame = 1
Query: 61 ELRKAIELLFFAYRDSTSDADAILARTGYGRAHHRILYFVGAYPGINVAQLLSILRITKQSLGRVLKQLVKQEFVEQRAGKNDRRQRLLFLTPKGQAFEKQLSIPQQARVRRAFAASGPDAVAGYLSVLEHLIDEAERKAILDAI 495
+LR+ IELLFFAYRD TSD DA+LA GYGRAHHR ++F+ PGI VA LL IL +TKQSL RVL+QL++ + V Q G+ DRRQR L LTPKG+ E+ LS PQ+ R+RRAF+ +GPDAVAG+ VLE +IDE R A+L +
Sbjct: 34 QLRQGIELLFFAYRDFTSDPDAVLAERGYGRAHHRAIHFIKRRPGITVAGLLDILGVTKQSLNRVLRQLIEDDLVVQTTGQADRRQRHLNLTPKGEELERSLSAPQRERLRRAFSEAGPDAVAGFRKVLERMIDEGGRDAVLSLV 178
BLAST of mRNA_P-wetherbeei_contig1685.3.1 vs. uniprot
Match: UPI001883C450 (MarR family transcriptional regulator n=1 Tax=Kordiimonas pumila TaxID=2161677 RepID=UPI001883C450) HSP 1 Score: 164 bits (416), Expect = 5.270e-49 Identity = 85/145 (58.62%), Postives = 108/145 (74.48%), Query Frame = 1
Query: 61 ELRKAIELLFFAYRDSTSDADAILARTGYGRAHHRILYFVGAYPGINVAQLLSILRITKQSLGRVLKQLVKQEFVEQRAGKNDRRQRLLFLTPKGQAFEKQLSIPQQARVRRAFAASGPDAVAGYLSVLEHLIDEAERKAILDAI 495
ELR+ IELL+FAYRD T D D IL + G+GRAHHR+LYFVG PG V+ LLS+LRITKQSL RVL QLV +++Q+ G DRRQRLL LTPKG+ FEK+L Q+ RV A+ +GP+AVAG+ VL +++DE ER+ +L I
Sbjct: 16 ELRRGIELLYFAYRDFTRDPDEILQKAGFGRAHHRVLYFVGRNPGTTVSGLLSLLRITKQSLSRVLGQLVDDGYIDQKTGATDRRQRLLHLTPKGEKFEKELFSTQRQRVAEAYKTAGPEAVAGFWEVLLNIVDEKEREQVLRQI 160
BLAST of mRNA_P-wetherbeei_contig1685.3.1 vs. uniprot
Match: A0A2D6T3V6_9PROT (MarR family transcriptional regulator n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6T3V6_9PROT) HSP 1 Score: 163 bits (413), Expect = 1.930e-48 Identity = 84/149 (56.38%), Postives = 112/149 (75.17%), Query Frame = 1
Query: 52 DSAELRKAIELLFFAYRDSTSDADAILARTGYGRAHHRILYFVGAYPGINVAQLLSILRITKQSLGRVLKQLVKQEFVEQRAGKNDRRQRLLFLTPKGQAFEKQLSIPQQARVRRAFAASGPDAVAGYLSVLEHLIDEAERKAILDAIR 498
D E+R+ IELLF+AYRD TSD DAIL +G+GRAHHR+++FVG PGI VA+LL ILRITKQSL RVL QL+++ ++ QR G DRRQRLL+LT +G E+ L+ PQ RV A+ +GP+AVA Y +L LI+E++R+A+L + R
Sbjct: 20 DEEEIRQGIELLFYAYRDFTSDPDAILXGSGFGRAHHRVVHFVGRRPGITVAELLDILRITKQSLSRVLSQLIERGYIVQRKGTRDRRQRLLYLTDEGTELERSLASPQHKRVGDAYREAGPEAVAAYRKILLGLINESDREAVLKSFR 168
BLAST of mRNA_P-wetherbeei_contig1685.3.1 vs. uniprot
Match: A0A418W9Q3_9PROT (MarR family transcriptional regulator n=1 Tax=Oleomonas cavernae TaxID=2320859 RepID=A0A418W9Q3_9PROT) HSP 1 Score: 163 bits (412), Expect = 2.420e-48 Identity = 89/145 (61.38%), Postives = 111/145 (76.55%), Query Frame = 1
Query: 61 ELRKAIELLFFAYRDSTSDADAILARTGYGRAHHRILYFVGAYPGINVAQLLSILRITKQSLGRVLKQLVKQEFVEQRAGKNDRRQRLLFLTPKGQAFEKQLSIPQQARVRRAFAASGPDAVAGYLSVLEHLIDEAERKAILDAI 495
E+R+ IELLFFAYRD T DAD +LAR G GRAHHR+++FVG PG+ V +LLSILRITKQSL RVL QL++++ V Q G DRRQRLL LT KG E+QLS Q+ARV RA+ +G +AVAG+ VL LIDEA+R++IL A+
Sbjct: 19 EIRQGIELLFFAYRDFTLDADTVLARHGMGRAHHRVIHFVGRRPGMTVNELLSILRITKQSLSRVLSQLIEEDLVVQVQGTRDRRQRLLSLTAKGTELERQLSGLQRARVTRAYREAGAEAVAGFRKVLVGLIDEADRESILAAV 163
BLAST of mRNA_P-wetherbeei_contig1685.3.1 vs. uniprot
Match: UPI001FF5B34B (MarR family winged helix-turn-helix transcriptional regulator n=1 Tax=Kordiimonas sp. A6E486 TaxID=2872312 RepID=UPI001FF5B34B) HSP 1 Score: 162 bits (409), Expect = 6.080e-48 Identity = 85/145 (58.62%), Postives = 110/145 (75.86%), Query Frame = 1
Query: 61 ELRKAIELLFFAYRDSTSDADAILARTGYGRAHHRILYFVGAYPGINVAQLLSILRITKQSLGRVLKQLVKQEFVEQRAGKNDRRQRLLFLTPKGQAFEKQLSIPQQARVRRAFAASGPDAVAGYLSVLEHLIDEAERKAILDAI 495
ELR+ IELL+FAYRD T D D ILA++G+GRAHHR+LYFVG PG V+ LL +LRITKQSL RVL QLV + +VEQ+ G+ DRRQRLL+LT KG+ FEK+L Q+ RV A+ +GP+AVAG+ VL +++DE +R +L I
Sbjct: 16 ELRRGIELLYFAYRDFTKDPDDILAQSGFGRAHHRVLYFVGRNPGTTVSGLLGLLRITKQSLSRVLGQLVDEGYVEQKPGEVDRRQRLLYLTDKGEDFEKKLFATQRNRVAEAYKKAGPEAVAGFWEVLLNIVDEDQRDTVLRQI 160
BLAST of mRNA_P-wetherbeei_contig1685.3.1 vs. uniprot
Match: A0A1Y5TVS2_9PROT (DNA-binding transcriptional repressor MarR n=1 Tax=Oceanibacterium hippocampi TaxID=745714 RepID=A0A1Y5TVS2_9PROT) HSP 1 Score: 162 bits (409), Expect = 6.470e-48 Identity = 90/145 (62.07%), Postives = 107/145 (73.79%), Query Frame = 1
Query: 61 ELRKAIELLFFAYRDSTSDADAILARTGYGRAHHRILYFVGAYPGINVAQLLSILRITKQSLGRVLKQLVKQEFVEQRAGKNDRRQRLLFLTPKGQAFEKQLSIPQQARVRRAFAASGPDAVAGYLSVLEHLIDEAERKAILDAI 495
ELR+ IEL+FFAYR TSD DAIL R +GRAHHR+++FVG PGI VA+LLSIL ITKQSL RVL LV+Q F+EQR G DRRQRLL LT KGQA E +L+ PQ+ RV RA+ +G +AV GY VL LID +R+ IL I
Sbjct: 17 ELRQGIELMFFAYRYFTSDPDAILKRYQFGRAHHRVVHFVGRNPGITVAELLSILSITKQSLSRVLSTLVEQGFIEQRPGTKDRRQRLLSLTEKGQALEDELASPQKGRVARAYREAGAEAVEGYRKVLLGLIDAEDREEILSRI 161
BLAST of mRNA_P-wetherbeei_contig1685.3.1 vs. uniprot
Match: A0A081BD46_9HYPH (MarR family transcriptional regulator n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BD46_9HYPH) HSP 1 Score: 162 bits (411), Expect = 9.120e-48 Identity = 85/157 (54.14%), Postives = 115/157 (73.25%), Query Frame = 1
Query: 34 PPIETGDSAELRKAIELLFFAYRDSTSDADAILARTGYGRAHHRILYFVGAYPGINVAQLLSILRITKQSLGRVLKQLVKQEFVEQRAGKNDRRQRLLFLTPKGQAFEKQLSIPQQARVRRAFAASGPDAVAGYLSVLEHLIDEAERKAILDAIRHG 504
P ++ EL +AIE LFFAYRD TSD D IL G+GRAHHR+++FVG +PGI VA LL+ILRITKQSL RVLK+LV Q ++ Q+ G DRRQRLL+L+ KG E++L+ PQ+ RV +A AA+GP+A + +VL HL++E +R+A+ I +G
Sbjct: 39 PARSPAETRELVEAIEWLFFAYRDFTSDPDEILHEYGFGRAHHRVIHFVGRHPGITVADLLNILRITKQSLSRVLKELVGQGYIVQKTGTKDRRQRLLYLSDKGMEMERRLAGPQRERVAKALAAAGPEAQKAWCAVLAHLVNEDDRRAVEALISNG 195 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1685.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1685.3.1 >prot_P-wetherbeei_contig1685.3.1 ID=prot_P-wetherbeei_contig1685.3.1|Name=mRNA_P-wetherbeei_contig1685.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp MADINNLYTVHPPIETGDSAELRKAIELLFFAYRDSTSDADAILARTGYGback to top mRNA from alignment at P-wetherbeei_contig1685:3991..4497- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1685.3.1 ID=mRNA_P-wetherbeei_contig1685.3.1|Name=mRNA_P-wetherbeei_contig1685.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig1685:3991..4497- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1685:3991..4497- >mRNA_P-wetherbeei_contig1685.3.1 ID=mRNA_P-wetherbeei_contig1685.3.1|Name=mRNA_P-wetherbeei_contig1685.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig1685:3991..4497- (Phaeothamnion wetherbeei SAG_119_79)back to top |