prot_P-wetherbeei_contig16849.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16849.1.1
Unique Nameprot_P-wetherbeei_contig16849.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length493
Homology
BLAST of mRNA_P-wetherbeei_contig16849.1.1 vs. uniprot
Match: UPI00143DE761 (GAF domain-containing protein n=1 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI00143DE761)

HSP 1 Score: 631 bits (1627), Expect = 8.670e-211
Identity = 330/496 (66.53%), Postives = 390/496 (78.63%), Query Frame = 0
Query:    1 NRLLGGFSTAAFRFVDGNVHLAAFTPVNPAADTALRADFPRPVHAFEAFQLAQQGKPFPISDTEAVVHAPIREIARLQGFRSILFVPLMNGDVPVGIIGVTRHEPGVFSSNHIQLLQTFADQAVIAIENARLFNEVQQRTEDLSETLQQQTATADVLKIISRSAFDLPSVLDTLVSSAALLCGDPQASIYLLRDGLLHLEAAHNISPEWIAQRRSHPLAPSRDTPSGRAALIGQLDHVPDLLADPDFSRPDLVELGDHRATLNVPMTREGVTIGVLSLARPTPGPFTQRQVELVQTFADQAVIAIENVRLFDEVQTRTRELTEALTYQTGSANILKVIASSPTDVEPVLNAIVENAADLCDAYDAVLLLKDGDDLRFSAHRGSIPIGLEKWPINRHWSAGRAVLDKAPVHLHDLLAEENADFSDGRELSRRM---GHRSILSVPLLRDNESIGAIVLRRTEVHPFSDKQISLLQTFADQAVIAIGNVRLFEQVQQR 493
            +RLL GFS A FRF+DG VHLAAFTPVNPAAD ALRADFP+    FE FQLAQQ KPFPI DTE + +APIR+IAR+ GFRS+LFVPLMNGD P+GII VTR EPG F+++H+ LLQTFADQAVIAIEN RLF+EVQ +T DLSE+LQQQTATADVLK+ISRSAFDL +VLDTLV SAA LC    A+I      + +   ++    E+    R+ P+ P R T +GR  L G + HV D+LADPD+        G+ R+ L VP+ REG+ IG L+L R    PFT +Q+EL+ TFADQAVIAIENVRLFDEVQ +TR+LTEALTYQTGS  IL VIASSPT+V PVLNAIVE+A +LCDAYDAV+LLKDG+DLRFSAH G I I +E WPI+R W+AGRA LD  PVH+ D+L++E ADF D  ELSRR    G R++LSVPLLR+NESIG+I+LRRTEV+PFSDKQISLLQTFADQAVIAIGNVRLF++VQ R
Sbjct:  436 HRLLDGFSAAVFRFLDGTVHLAAFTPVNPAADAALRADFPKSADEFEPFQLAQQAKPFPIPDTEQIPYAPIRQIARVHGFRSMLFVPLMNGDDPIGIISVTRKEPGAFATHHVHLLQTFADQAVIAIENVRLFDEVQAKTRDLSESLQQQTATADVLKVISRSAFDLQTVLDTLVESAARLCDADMAAITRRIGDVFYRAGSYGFPEEFKDYVRATPVTPDRRTITGRTLLEGHIVHVEDVLADPDYDFEGQQLSGNPRSFLGVPLLREGIPIGALTLTRLVVKPFTDKQIELISTFADQAVIAIENVRLFDEVQAKTRDLTEALTYQTGSGKILSVIASSPTEVGPVLNAIVESACELCDAYDAVVLLKDGNDLRFSAHHGPIGINIESWPISRDWTAGRAFLDGRPVHVRDMLSDEGADFPDSHELSRRTASSGMRTVLSVPLLRENESIGSILLRRTEVNPFSDKQISLLQTFADQAVIAIGNVRLFDEVQAR 931          
BLAST of mRNA_P-wetherbeei_contig16849.1.1 vs. uniprot
Match: A0A170PYR9_BRASZ (Histidine kinase n=1 Tax=Bradyrhizobium sp. TaxID=376 RepID=A0A170PYR9_BRASZ)

HSP 1 Score: 597 bits (1540), Expect = 4.650e-196
Identity = 344/671 (51.27%), Postives = 412/671 (61.40%), Query Frame = 0
Query:    1 NRLLGGFSTAAFRFVDGNVHLAAFTPVNPAADTALRADFPRPVHAFEAFQLAQQGKPFPISDTEAVVHAPIREIARLQGFRSILFVPLMNGDVPVGIIGVTRHEPGVFSSNHIQLLQTFADQAVIAIENARLFNEVQQRT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDLSETLQQQTATADVLKIISRSAFDLPSVLDTLVSSAALLCGDPQASIYLLRDGLLHLEAAHNISPEWIAQRRSHPLAPSRDTPSGRAALIGQLDHVPDLLADPDFSRPDLVELGDHRATLNVPMTREGVTIGVLSLARPTPGPFTQRQVELVQTFADQAVIAIENVRLFDEVQTRTRELTEALTYQTGSANILKVIASSPTDVEPVLNAIVENAADLCDAYDAVLLLKDGDDLRFSAHRGSIPIGLEKWPINRHWSAGRAVLDKAPVHLHDLLAEENADFSDGRELSRRMGHRSILSVPLLRDNESIGAIVLRRTEVHPFSDKQISLLQTFADQAVIAIGNVRLFEQVQQR 493
            N LLGGFSTA FRF+DG  HLAAFTP +PAAD  L+  FPRP+  F+ F +AQ GK    +D E++ +  I+ IAR +GF S++FVPL+     +G+I VTR E G F+ +H+QLLQTFADQAVIAIENARLFN+VQQRT                                                                                                                                                                                  +DLSE+LQQQTATADVLK+ISRS FDLP+VL+TLVSSAALLCGDP+A+IYL+RDGLLHLEAAHN   EW+  RRS PLAPSRDTPSGRAAL GQ+DHVPDLL DPDF R DL  LGD+RATLNVP+ REG+TIGVLSLARP PGPFTQRQ+++VQ+FADQAVIAIENVRLF+++Q RTR+LTEALTYQTGSANIL+VIASSPTDV PVL AIVE+A  LC+A DAV+LL+  D++ F A  GSIP+  ++ PI+R   +GRA+LD  PVH+HDLL  E  ++  G EL+RR   R+ILSVPLLR+ ESIGAIVLRRTEV+PF++KQI+LL+TFADQAVIAIGNVRLFE+VQ+R
Sbjct:  266 NALLGGFSTAVFRFIDGIGHLAAFTPTDPAADEILKKSFPRPIADFDTFAMAQAGKVVQTADIESLTN-DIKHIARARGFSSMMFVPLVCSGAVIGMISVTRKETGHFTDHHVQLLQTFADQAVIAIENARLFNQVQQRTRDLTEALQQQTAIGEVLKTISRSTFDLQPVLDTLVRTVARLCDTEMAFIMRREGRVYRAGAAVGYTKDYIEFLKSHTIAPDRGTITGRAVLEGRPIQILDVSADPEYTLRESTTLAGQHTALCVPLLREGEPIGTIVLARQRVEPFTEKQIELVSTFADQAVIAIENVRLFDELRQRTDDLSESLQQQTATADVLKVISRSTFDLPNVLNTLVSSAALLCGDPRAAIYLIRDGLLHLEAAHNNPFEWVDLRRSQPLAPSRDTPSGRAALSGQIDHVPDLLKDPDFKRHDLASLGDYRATLNVPLVREGITIGVLSLARPEPGPFTQRQIDIVQSFADQAVIAIENVRLFEQLQARTRDLTEALTYQTGSANILRVIASSPTDVGPVLKAIVESACGLCEAADAVVLLRGEDEVVFGAQHGSIPMSWQRLPIDRQLPSGRAILDCKPVHVHDLLGPEGNEYPVGLELARRSNVRTILSVPLLREGESIGAIVLRRTEVNPFNEKQIALLRTFADQAVIAIGNVRLFEEVQER 935          
BLAST of mRNA_P-wetherbeei_contig16849.1.1 vs. uniprot
Match: UPI001EDB6517 (GAF domain-containing protein n=1 Tax=Bradyrhizobium sp. WYCCWR 13023 TaxID=2911009 RepID=UPI001EDB6517)

HSP 1 Score: 586 bits (1510), Expect = 1.480e-190
Identity = 335/671 (49.93%), Postives = 407/671 (60.66%), Query Frame = 0
Query:    1 NRLLGGFSTAAFRFVDGNVHLAAFTPVNPAADTALRADFPRPVHAFEAFQLAQQGKPFPISDTEAVVHAPIREIARLQGFRSILFVPLMNGDVPVGIIGVTRHEPGVFSSNHIQLLQTFADQAVIAIENARLFNEVQQRT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EDLSETLQQQTATADVLKIISRSAFDLPSVLDTLVSSAALLCGDPQASIYLLRDGLLHLEAAHNISPEWIAQRRSHPLAPSRDTPSGRAALIGQLDHVPDLLADPDFSRPDLVELGDHRATLNVPMTREGVTIGVLSLARPTPGPFTQRQVELVQTFADQAVIAIENVRLFDEVQTRTRELTEALTYQTGSANILKVIASSPTDVEPVLNAIVENAADLCDAYDAVLLLKDGDDLRFSAHRGSIPIGLEKWPINRHWSAGRAVLDKAPVHLHDLLAEENADFSDGRELSRRMGHRSILSVPLLRDNESIGAIVLRRTEVHPFSDKQISLLQTFADQAVIAIGNVRLFEQVQQR 493
            N LLGGFSTA FRF+DG  HLAAFTP +PAAD  L+  FPRP+  FE F LAQ GK     D E + +  I+ IAR +GFRS++FVPL++    +G+I VTR E G F  +H+QLLQTFADQAVIAIENARLFN+VQQRT                                                                                                                                                                                  +DLSE+LQQQTATADVLK+ISRS FDLP+VL TLVSSAA LCG+P+A+IYL+RDGLLHLEAAHN S +WIA RR+ PL  S DTPSGRAAL GQ+DHVPDLL DP+F R DL  LGD+RATLNVP+ REG+T GVLSLARP PGPFT+RQ+E+VQTFADQAVIAIENVRLF++++ + R+L EALTYQTGSANILKVIASSPTDV PV+ AIVE+A +LCDA DAV+LL+DGD+L F A  G++P+   + PI+R   +GRA++D  PVH+HDLL  E  +F  GREL++R    +IL+VP+LR+++SIGAI LRRTE++PF++KQI+LLQTFADQAVIAIGNVRLFE+VQ+R
Sbjct:  405 NALLGGFSTAVFRFIDGIGHLAAFTPTSPAADDILKKSFPRPIADFETFALAQAGKVVQTPDVETLTNE-IKYIARARGFRSMMFVPLVSSGAVIGMISVTRRETGNFVEHHVQLLQTFADQAVIAIENARLFNQVQQRTRDLAESLQQQTAIGEVLKTISRSTFDLQPVLDTLVRTVARLCDTEMAFIMRRQGNVYRAGAAVGYTKEYIEFLKGHPITPDRGTITGRAVLERRPIQIDDVSNDPEYTLRESTTLAGQHTALCVPLLREGEPIGTIVLARQRVEPFTEKQIELVTTFADQAVIAMENVRLFDELRQRTDDLSESLQQQTATADVLKVISRSTFDLPNVLKTLVSSAARLCGNPRAAIYLIRDGLLHLEAAHNNSAQWIALRRNQPLVLSHDTPSGRAALSGQIDHVPDLLHDPEFKRRDLARLGDYRATLNVPLVREGITTGVLSLARPEPGPFTERQIEIVQTFADQAVIAIENVRLFEQLEAKRRDLAEALTYQTGSANILKVIASSPTDVGPVMKAIVESACELCDAADAVVLLRDGDELVFGAQHGTVPMAWRRQPIDRRLPSGRAIVDCKPVHVHDLLGPEGDEFPIGRELAQRSHVHTILTVPMLREDKSIGAIALRRTEINPFNEKQIALLQTFADQAVIAIGNVRLFEEVQER 1074          
BLAST of mRNA_P-wetherbeei_contig16849.1.1 vs. uniprot
Match: A0A537Q0U3_9PROT (Histidine kinase n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537Q0U3_9PROT)

HSP 1 Score: 569 bits (1467), Expect = 1.800e-187
Identity = 306/494 (61.94%), Postives = 369/494 (74.70%), Query Frame = 0
Query:    1 NRLLGGFSTAAFRFVDGNVHLAAFTPVNPAADTALRADFPRPVHAFEAFQLAQQGKPFPISDTEAVVHAPIREIARLQGFRSILFVPLMNGDVPVGIIGVTRHEPGVFSSNHIQLLQTFADQAVIAIENARLFNEVQQRTEDLSETLQQQTATADVLKIISRSAFDLPSVLDTLVSSAALLCGDPQASIYLLRDGLLHLEAAHNISPEWIAQRRSHPLAPSRDTPSGRAALIGQLDHVPDLLADPDFSRPDLVEL-GDHRATLNVPMTREGVTIGVLSLARPTPGPFTQRQVELVQTFADQAVIAIENVRLFDEVQTRTRELTEALTYQTGSANILKVIASSPTDVEPVLNAIVENAADLCDAYDAVLLLKDGDDLRFSAHRGSIPIGLEKWPINRHWSAGRAVLDKAPVHLHDLLAEENADFSDGRELSRRMGHRSILSVPLLRDNESIGAIVLRRTEVHPFSDKQISLLQTFADQAVIAIGNVRLFEQVQQR 493
            NRL+GGFS+  FRF+DG  +L AFTP  P AD  L++ FP PV  F  F++AQ G+   I DTE +  A I  I+R +GFRS+LF PLMN    +GIIGVTR  PG F+ +H+QLLQTFADQAVIAIEN RLF EVQ RT DL+E+LQQQTATADVLK+ISRSAFDL +VLDTLV SAA LC    A+I   +        A+  SPE++   +  P+   R T  GR  L G++ HVPD+ +DPD+S  +   L GD R  L VP+ REG  +G L+L R    PFT RQ+ELV+TFADQAVIAIENVRLFDEVQ +TR+LTEALTYQTGS+NIL VIASSPTD  PVL AIVE+A  LC+A DA++ LKDGDDLRF A  GSIP+  E+ PINR W +GRAV+D+ PVH+ DLL+ E  +F +G+E +RR   R++LSVPLLR+NESIG+I LRRTEVHPFSDKQI+LLQTFADQAVIAIGNVRLFEQVQ+R
Sbjct:  577 NRLIGGFSSTVFRFIDGIAYLKAFTPTTPEADEVLKSTFPLPVAEFPPFRVAQAGEVTQIPDTETLPDA-ILNISRARGFRSMLFAPLMNEGASIGIIGVTRLLPGNFADHHVQLLQTFADQAVIAIENVRLFEEVQARTSDLTESLQQQTATADVLKVISRSAFDLQTVLDTLVESAARLCEADMAAITRQKGNEYFRAGAYGFSPEFMNYVKDIPVKAERATIIGRTLLEGKVTHVPDVHSDPDYSFSEGQRLSGDPRTILGVPLLREGHPVGALALLRRAVRPFTDRQIELVKTFADQAVIAIENVRLFDEVQAKTRDLTEALTYQTGSSNILSVIASSPTDDRPVLKAIVESACQLCEADDALVTLKDGDDLRFQAQHGSIPVVWERTPINRQWPSGRAVVDRTPVHVRDLLSTEGEEFPEGQEYARRTNVRTVLSVPLLRENESIGSIALRRTEVHPFSDKQIALLQTFADQAVIAIGNVRLFEQVQER 1069          
BLAST of mRNA_P-wetherbeei_contig16849.1.1 vs. uniprot
Match: UPI00190AB02D (GAF domain-containing protein n=1 Tax=Bradyrhizobium diazoefficiens TaxID=1355477 RepID=UPI00190AB02D)

HSP 1 Score: 553 bits (1425), Expect = 8.880e-185
Identity = 293/492 (59.55%), Postives = 366/492 (74.39%), Query Frame = 0
Query:    2 RLLGGFSTAAFRFVDGNVHLAAFTPVNPAADTALRADFPRPVHAFEAFQLAQQGKPFPISDTEAVVHAPIREIARLQGFRSILFVPLMNGDVPVGIIGVTRHEPGVFSSNHIQLLQTFADQAVIAIENARLFNEVQQRTEDLSETLQQQTATADVLKIISRSAFDLPSVLDTLVSSAALLCGDPQASIYLLRDGLLHLEAAHNISPEWIAQRRSHPLAPSRDTPSGRAALIGQLDHVPDLLADPDFSRPDLVELGDHRATLNVPMTREGVTIGVLSLARPTPGPFTQRQVELVQTFADQAVIAIENVRLFDEVQTRTRELTEALTYQTGSANILKVIASSPTDVEPVLNAIVENAADLCDAYDAVLLLKDGDDLRFSAHRGSIPIGLEKWPINRHWSAGRAVLDKAPVHLHDLLAEENADFSDGRELSRRMGHRSILSVPLLRDNESIGAIVLRRTEVHPFSDKQISLLQTFADQAVIAIGNVRLFEQVQQR 493
            RL+GGFSTA FRFVD   HLAAFTP + AAD  L+A FP PV  FE F+LAQ GKP  I D E +  + I++IAR +GFRS+L  PLMN +VP+G+I VTR E G F  +H+QLLQTFADQAVIAIENARLF +V+ +T +LSE LQ+QTATADVLK+ISRSAFDL +VLD L+SSA  LC     +I    +G   L AA+   PEWI   +++     R +  GR  L G+   VPDLLADPDF+RP   +L   RA L VP+ REG   GV++L R T G F  +QVELV TFADQAVIAIENV+LF++VQ +TR+L+EALTYQTGSANILKVIASSPTDVEPVL  IVE+A +LC AYD+V++LKDG +L   AH G I +G + W  +R   +G A+ ++ P+HLHD+L++E  +F   + +SR+ G R+IL+VP+LR+ ESIGAIVLRRTEV PFSDKQ++LLQTF DQAVIA+GNVRLF++VQ R
Sbjct:  248 RLIGGFSTAVFRFVDDIAHLAAFTPTSSAADEVLKAGFPTPVGRFEPFRLAQAGKPIQIGDIETLPDSQIKQIARARGFRSMLLAPLMNANVPIGLISVTRLEAGSFVDHHVQLLQTFADQAVIAIENARLFEQVRFKTHELSEALQRQTATADVLKVISRSAFDLRTVLDALLSSACRLCDAEIGTIRYEHEGNYRLAAAYGCKPEWIEHFQTYTTKADRGSIFGRTILDGRPVRVPDLLADPDFNRPQAQKLIGMRAALGVPLVREGHAFGVINLFRFTVGSFEDKQVELVATFADQAVIAIENVKLFEQVQAKTRDLSEALTYQTGSANILKVIASSPTDVEPVLRTIVESACELCAAYDSVVVLKDGQNLVVRAHHGPIGMGTQTWIDDRTSVSGLAIAERVPIHLHDVLSDEGRNFPVAQAMSRQDGCRTILAVPMLREGESIGAIVLRRTEVQPFSDKQVTLLQTFGDQAVIALGNVRLFDEVQAR 739          
BLAST of mRNA_P-wetherbeei_contig16849.1.1 vs. uniprot
Match: UPI001BAB14EC (GAF domain-containing protein n=9 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001BAB14EC)

HSP 1 Score: 558 bits (1438), Expect = 8.730e-183
Identity = 329/664 (49.55%), Postives = 390/664 (58.73%), Query Frame = 0
Query:    1 NRLLGGFSTAAFRFVDGNVHLAAFTPVNPAADTALRADFPRPVHAFEAFQLAQQGKPFPISDTEAVVHAPIREIARLQGFRSILFVPLMNGDVPVGIIGVTRHEPGVFSSNHIQLLQTFADQAVIAIENARLFNE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------VQQRTEDLSETLQQQTATADVLKIISRSAFDLPSVLDTLVSSAALLCGDPQASIYLLRDGLLHLEAAHNISPEWIAQRRSHPLAPSRDTPSGRAALIGQLDHVPDLLADPDFSRPDLVELGDHRATLNVPMTREGVTIGVLSLARPTPGPFTQRQVELVQTFADQAVIAIENVRLFDEVQTRTRELTEALTYQTGSANILKVIASSPTDVEPVLNAIVENAADLCDAYDAVLLLKDGDDLRFSAHRGSIPIGLEKWPINRHWSAGRAVLDKAPVHLHDLLAEENADFSDGRELSRRMGHRSILSVPLLRDNESIGAIVLRRTEVHPFSDKQISLLQTFADQAVIAIGNVRLFEQVQQR 493
            NRLLGGFSTA FRF+D  VHLAAFTPV+PAAD AL+ADFPRPV AFEAF+LAQQGKPFPI DTE + HAPI+EIARL GFRS+LFVPLM+  VP+G++ +TR   G F+ +H+QL+QTFADQAVIAIEN RLFNE                                                                                                                                                                           VQ +T DLSE+LQQQTATADVLK+ISRSAFDL +VL+TLV SAA LC   + +I+  RD    L A+  +SP       +        +  GR  L G+  H+ D   D ++   D     + R  L VP+ REG  IGV  LAR    PF+ +Q+ELVQTFADQAVIAIENVRLFDEVQT+TR+LTEALTYQT S+NIL+VIASSPTDV PVLNAIVE+A  LCDAYDA ++L+DG+ LR SAH G IPIG+EKWPINR W+AGRA +D+ PVH+ DL  E++ADF+DGRELS RMGHR+ILSVPLLR+ ESIGAIVLRRTEVHPFS+KQI+LLQTFADQAVIAIGNVRLF++VQ +
Sbjct:   98 NRLLGGFSTAVFRFLDDTVHLAAFTPVSPAADAALQADFPRPVDAFEAFRLAQQGKPFPIPDTEEIPHAPIKEIARLHGFRSMLFVPLMSNGVPIGVVSITRATTGSFAEHHVQLMQTFADQAVIAIENVRLFNETQEALKHQTATSEVLQVIGRSMTDTQPVFERILDSTERLFDCRQVSIFLAPGDGLLHVAARRGTGYEAIDKVYPLPIEQTSAPRVLGERRQVYLPDVMYGADVPSSIRRVVQVFGNFSVVMTPMIWEGQGIGLISVLREPNAAFTPKELSLLRTFADQAVIAIENVRLFKEVQAKTADLSESLQQQTATADVLKVISRSAFDLQTVLETLVVSAARLCEADEGTIFQPRDDAYRLTASCGLSPPRKVFLENCSFQLGTGSTIGRVLLEGKTVHIEDSQTDQNYRFQD----PEVRTRLGVPLLREGAPIGVFVLARRDVRPFSDKQIELVQTFADQAVIAIENVRLFDEVQTKTRDLTEALTYQTESSNILRVIASSPTDVGPVLNAIVESACQLCDAYDAAVVLQDGEYLRISAHHGPIPIGIEKWPINRRWTAGRAFVDQTPVHIEDLSDEKHADFTDGRELSLRMGHRTILSVPLLREGESIGAIVLRRTEVHPFSEKQITLLQTFADQAVIAIGNVRLFQEVQAK 757          
BLAST of mRNA_P-wetherbeei_contig16849.1.1 vs. uniprot
Match: A0A1I3VYC6_9BRAD (Histidine kinase n=4 Tax=Bradyrhizobium TaxID=374 RepID=A0A1I3VYC6_9BRAD)

HSP 1 Score: 543 bits (1400), Expect = 3.950e-181
Identity = 289/492 (58.74%), Postives = 362/492 (73.58%), Query Frame = 0
Query:    2 RLLGGFSTAAFRFVDGNVHLAAFTPVNPAADTALRADFPRPVHAFEAFQLAQQGKPFPISDTEAVVHAPIREIARLQGFRSILFVPLMNGDVPVGIIGVTRHEPGVFSSNHIQLLQTFADQAVIAIENARLFNEVQQRTEDLSETLQQQTATADVLKIISRSAFDLPSVLDTLVSSAALLCGDPQASIYLLRDGLLHLEAAHNISPEWIAQRRSHPLAPSRDTPSGRAALIGQLDHVPDLLADPDFSRPDLVELGDHRATLNVPMTREGVTIGVLSLARPTPGPFTQRQVELVQTFADQAVIAIENVRLFDEVQTRTRELTEALTYQTGSANILKVIASSPTDVEPVLNAIVENAADLCDAYDAVLLLKDGDDLRFSAHRGSIPIGLEKWPINRHWSAGRAVLDKAPVHLHDLLAEENADFSDGRELSRRMGHRSILSVPLLRDNESIGAIVLRRTEVHPFSDKQISLLQTFADQAVIAIGNVRLFEQVQQR 493
            RL+GGFSTA FRFVD   HLAAFTP + AAD  L+A FP PV  FE F+LAQ GKP  I D E +  +  ++IAR +GFRS+L  PLM+  VP+G+I VTR E G F  +H+QLLQT ADQAVIAIENARLF +V+ RT +LSE LQ+QTATADVLK+ISRSAFDL +VLD L+SSA  LC     +I     G   L A +   PEWI   +++     R +  GR  L G+  HVPDLLADPDF+RP   +L   RA L VP+ REG   GV++L R   G F  +Q+ELV TFADQAVIAIENV+LF++VQ +TR+++EALTY TGSANILKVIASSPTDVEPVL  IVE+A +LC+AYD+V++LK+G+DL   AH G I +G + W  +R   +G A+ D+ PVHLHD+L++E  DF   + +SR+ G R++L+VP+L + ESIGAIVLRR EV+PFS+KQI+LLQTFADQAVIA+GNVRLFE+VQ R
Sbjct:  248 RLIGGFSTAVFRFVDDIAHLAAFTPTSSAADKVLKAGFPTPVARFEPFRLAQAGKPVQIGDIETLPDSQKKQIARARGFRSMLLAPLMSDHVPIGLISVTRLEAGSFVDHHVQLLQTSADQAVIAIENARLFAQVRFRTHELSEALQRQTATADVLKVISRSAFDLRTVLDALLSSACRLCDAEIGTIRYEHKGNYRLAATYGCKPEWIEHFQTYTTKADRGSIFGRTILDGRPVHVPDLLADPDFNRPQAQKLIGMRAALGVPLVREGHAFGVINLFRFAVGSFEDKQIELVTTFADQAVIAIENVKLFEQVQAKTRDVSEALTYLTGSANILKVIASSPTDVEPVLRTIVESACELCEAYDSVVILKEGEDLVVRAHHGPIGMGTQTWTDDRTSVSGLAIADRVPVHLHDVLSDEGGDFPIAQAMSRQDGCRTLLAVPMLSEGESIGAIVLRRAEVNPFSEKQIALLQTFADQAVIALGNVRLFEEVQAR 739          
BLAST of mRNA_P-wetherbeei_contig16849.1.1 vs. uniprot
Match: A0A840HHR0_9BRAD (Histidine kinase n=5 Tax=Bradyrhizobium TaxID=374 RepID=A0A840HHR0_9BRAD)

HSP 1 Score: 549 bits (1414), Expect = 1.740e-179
Identity = 281/437 (64.30%), Postives = 347/437 (79.41%), Query Frame = 0
Query:   56 KPFPISDTEAVVHAPIREIARLQGFRSILFVPLMNGDVPVGIIGVTRHEPGVFSSNHIQLLQTFADQAVIAIENARLFNEVQQRTEDLSETLQQQTATADVLKIISRSAFDLPSVLDTLVSSAALLCGDPQASIYLLRDGLLHLEAAHNISPEWIAQRRSHPLAPSRDTPSGRAALIGQLDHVPDLLADPDFSRPDLVELGDHRATLNVPMTREGVTIGVLSLARPTPGPFTQRQVELVQTFADQAVIAIENVRLFDEVQTRTRELTEALTYQTGSANILKVIASSPTDVEPVLNAIVENAADLCDAYDAVLLLKDGDDLRFSAHRGSIPIGLEKWPINRHWSAGRAVLDKAPVHLHDLLAEENADFSDGRELSRRMGHRSILSVPLLRDNESIGAIVLRRTEVHPFSDKQISLLQTFADQAVIAIGNVRLFEQVQQ 492
            +P  I D  A     +RE   + G R+ L VPLM  + P+G + + R     F+   I+L+ TFADQAVIAIENARL  E++QR+EDLSE+L+QQTATADVLK+ISRSAFDLP+VL+TLVSSAA LCGDP+A+IYL+RDGLLHLEAAHN  PEW+A R+S PLAPSRDTPSGRAAL G++DHV DL+ DPDFSR DL  +G +RATLN+P+ REG  IGVLSLARP PGPFT RQ+E+VQTFADQAVIAIENVRLF+++QTRTR+L+EALTYQTGSANIL+VIASSPT+V PVL AIVE+A  LC+AYDA+++L+DGDD+   AH G +P+   +  I+     GRA++D+  V + DLL  +  ++  GRE + R   R++LSVPLLR+ ES+GAIVLRR EV PF DKQI+LLQTFADQAVIAIGNVRLFEQ+ +
Sbjct:  469 RPVQILDVAADPEYRLRESTTMAGQRTALGVPLMRENEPIGALVIARKRVQPFTEKQIELVATFADQAVIAIENARLLKELRQRSEDLSESLRQQTATADVLKVISRSAFDLPNVLETLVSSAARLCGDPRAAIYLIRDGLLHLEAAHNNPPEWVALRKSQPLAPSRDTPSGRAALTGRVDHVADLMKDPDFSRHDLARIGGYRATLNIPLVREGAAIGVLSLARPEPGPFTSRQIEIVQTFADQAVIAIENVRLFEQLQTRTRDLSEALTYQTGSANILRVIASSPTEVGPVLKAIVESACGLCEAYDALVVLRDGDDIVIQAHHGQVPVVWSRRAISVKSPTGRAIIDRRTVQVRDLLGPDGEEYPIGREYAVRSNVRTVLSVPLLREGESMGAIVLRRMEVRPFDDKQITLLQTFADQAVIAIGNVRLFEQLNE 905          
BLAST of mRNA_P-wetherbeei_contig16849.1.1 vs. uniprot
Match: A0A1I3SSV8_9BRAD (Histidine kinase n=1 Tax=Bradyrhizobium sp. Gha TaxID=1855318 RepID=A0A1I3SSV8_9BRAD)

HSP 1 Score: 529 bits (1363), Expect = 1.970e-175
Identity = 282/492 (57.32%), Postives = 356/492 (72.36%), Query Frame = 0
Query:    2 RLLGGFSTAAFRFVDGNVHLAAFTPVNPAADTALRADFPRPVHAFEAFQLAQQGKPFPISDTEAVVHAPIREIARLQGFRSILFVPLMNGDVPVGIIGVTRHEPGVFSSNHIQLLQTFADQAVIAIENARLFNEVQQRTEDLSETLQQQTATADVLKIISRSAFDLPSVLDTLVSSAALLCGDPQASIYLLRDGLLHLEAAHNISPEWIAQRRSHPLAPSRDTPSGRAALIGQLDHVPDLLADPDFSRPDLVELGDHRATLNVPMTREGVTIGVLSLARPTPGPFTQRQVELVQTFADQAVIAIENVRLFDEVQTRTRELTEALTYQTGSANILKVIASSPTDVEPVLNAIVENAADLCDAYDAVLLLKDGDDLRFSAHRGSIPIGLEKWPINRHWSAGRAVLDKAPVHLHDLLAEENADFSDGRELSRRMGHRSILSVPLLRDNESIGAIVLRRTEVHPFSDKQISLLQTFADQAVIAIGNVRLFEQVQQR 493
            RL+GGFS A FRFVD   HLAAFTP + AAD  L+A FP PV  FE F LAQ GKP  I D E +  + I++IAR +GFRS+L  PLM  +VP+G+I VTR E G F  +H+QLLQTFADQAVIAIENARLF +V+ +T +LS  LQ+QTATADVLK+ISRSAFDL +VLD L+SSA  LC     +I   ++G   L AA+   PEWI   +++     R +  GR  L G+   VPDLLADPDF+RP   +L   RA L VP+ R G   GV++L R   G F  +Q+ELV TFADQAVIAIENV+LF++VQ +TR+L+EALTYQTGS+NILKVIASSPTDVEPVL  IVE+A +LC+AYD+V++LK+G DL   AH G I +G   W  +R   +G ++ ++ P+HL D+L+ E + F   + +SR+ G R+IL+VP+L + ESIGA+VLRR EV PFS KQI+LLQTFADQAVIA+GN RLFE+VQ R
Sbjct:  261 RLIGGFSAAVFRFVDDIAHLAAFTPTSSAADEVLKAGFPTPVDRFEPFMLAQAGKPIQIGDIETLPDSQIKQIARARGFRSMLLAPLMGDNVPIGLIRVTRFEAGSFVDHHVQLLQTFADQAVIAIENARLFEQVRFKTNELSAALQRQTATADVLKVISRSAFDLRTVLDALLSSACRLCDAEIGTIRYEQEGNYRLAAAYGCKPEWIEHFQTYTTKADRGSIFGRTILDGRPVCVPDLLADPDFNRPQAQKLIGMRAALGVPLVRAGHAFGVINLFRFAVGSFEDKQIELVATFADQAVIAIENVKLFEQVQAKTRDLSEALTYQTGSSNILKVIASSPTDVEPVLRTIVESACELCEAYDSVVVLKEGQDLVVRAHHGPIGMGTRTWTDDRTSVSGLSIAERVPIHLQDVLSYEGSKFPVAQAMSRQDGCRTILAVPMLSEGESIGAVVLRRAEVQPFSAKQIALLQTFADQAVIALGNARLFEKVQAR 752          
BLAST of mRNA_P-wetherbeei_contig16849.1.1 vs. uniprot
Match: UPI001FCE9BC3 (GAF domain-containing protein n=1 Tax=Bradyrhizobium algeriense TaxID=634784 RepID=UPI001FCE9BC3)

HSP 1 Score: 529 bits (1362), Expect = 4.250e-173
Identity = 288/494 (58.30%), Postives = 356/494 (72.06%), Query Frame = 0
Query:    1 NRLLGGFSTAAFRFVDGNVHLAAFTPVNPAADTALRADFPRPVHAFEAFQLAQQGKPFPISDTEAVVHAPIREIARLQGFRSILFVPLMNGDVPVGIIGVTRHEPGVFSSNHIQLLQTFADQAVIAIENARLFNEVQQRTEDLSETLQQQTATADVLKIISRSAFDLPSVLDTLVSSAALLCGDPQASIYLLRDGLLHLEAAHNISPEWIAQRRSHPLAPSRDTPSGRAALIGQLDHVPDLLADPDFSRPDLVELGDHRATLNVPMTREGVTIGVLSLARPTPGPFTQRQVELVQTFADQAVIAIENVRLFDEVQTRTRELTEALTYQTGSANILKVIASSPTDVEPVLNAIVENAADLCDAYDAVLLLKDGDDLRFSAHRGSIPIGL-EKWPINRHWSAGRAVLDKAPVHLHDLLAEENADFSDGRELSRRMGHRSILSVPLLRDNESIGAIVLRRTEVHPFSDKQISLLQTFADQAVIAIGNVRLFEQVQQR 493
            NRL+GGFS A FR+ DG +HLAAFTP +   D  L++ FP P+  F  +QL ++G P  + DT+  +    R+IAR +G+RS+LF PLMN   PVGII VTR  PG F   H++LLQ FADQAVIAI+N  LFNEVQ RT DLSE+L+QQTA  DVLK ISRS FDL  VLDTLV+SAA LC    A I           AA   +  +I    +HPL   R T +GRA L  +   + D++ADP+++  +   L   R TL VP+ RE   IGV+ LAR    PFTQ+Q++LV TFADQAVIAIENVRLF+EV+ RTR+L+EALTYQTGSANIL+VIASSPTDV PVL+AIVE+A +LCDA DA++ LK+ D L + AH G IP+   EK  INR + AGR+V+DK P+H+ D+ +E+ ++F + RELSR  G RSILS PLLR+NESIGAI+LRRTEVHPF+DKQISLLQTFADQAVIAIGNV LFE+VQ R
Sbjct:  276 NRLIGGFSAAVFRYSDGRIHLAAFTPTDAQGDAVLQSSFPVPLAEFPPYQLTREGAPAELPDTD--LEPAARDIARARGYRSMLFAPLMNDGEPVGIITVTRVAPGPFGEQHVRLLQMFADQAVIAIKNVGLFNEVQARTNDLSESLRQQTAVGDVLKTISRSTFDLQPVLDTLVNSAAQLCDADMAFIMRRVGDEYRAGAAVGYTEAYIDFLTNHPLPVDRGTVTGRAVLESRPVQIADVVADPEYTLHETTTLAGQRTTLGVPLLRESEPIGVIVLARKRVEPFTQQQIDLVATFADQAVIAIENVRLFNEVRQRTRDLSEALTYQTGSANILRVIASSPTDVGPVLDAIVESACELCDANDAIVYLKEDDHLSYKAHHGPIPVIFGEKRAINRDYVAGRSVVDKMPIHVGDVFSEDGSEFPEARELSRSEGIRSILSAPLLRENESIGAILLRRTEVHPFTDKQISLLQTFADQAVIAIGNVHLFEEVQAR 767          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16849.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00143DE7618.670e-21166.53GAF domain-containing protein n=1 Tax=unclassified... [more]
A0A170PYR9_BRASZ4.650e-19651.27Histidine kinase n=1 Tax=Bradyrhizobium sp. TaxID=... [more]
UPI001EDB65171.480e-19049.93GAF domain-containing protein n=1 Tax=Bradyrhizobi... [more]
A0A537Q0U3_9PROT1.800e-18761.94Histidine kinase n=2 Tax=Alphaproteobacteria bacte... [more]
UPI00190AB02D8.880e-18559.55GAF domain-containing protein n=1 Tax=Bradyrhizobi... [more]
UPI001BAB14EC8.730e-18349.55GAF domain-containing protein n=9 Tax=unclassified... [more]
A0A1I3VYC6_9BRAD3.950e-18158.74Histidine kinase n=4 Tax=Bradyrhizobium TaxID=374 ... [more]
A0A840HHR0_9BRAD1.740e-17964.30Histidine kinase n=5 Tax=Bradyrhizobium TaxID=374 ... [more]
A0A1I3SSV8_9BRAD1.970e-17557.32Histidine kinase n=1 Tax=Bradyrhizobium sp. Gha Ta... [more]
UPI001FCE9BC34.250e-17358.30GAF domain-containing protein n=1 Tax=Bradyrhizobi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003018GAF domainSMARTSM00065gaf_1coord: 344..491
e-value: 1.4E-14
score: 64.4
coord: 3..137
e-value: 0.0033
score: 23.9
coord: 166..315
e-value: 7.4E-15
score: 65.4
IPR003018GAF domainPFAMPF01590GAFcoord: 166..305
e-value: 2.3E-14
score: 54.2
IPR003018GAF domainPFAMPF13185GAF_2coord: 4..128
e-value: 3.4E-12
score: 46.8
coord: 343..481
e-value: 1.4E-15
score: 57.7
IPR029016GAF-like domain superfamilyGENE3D3.30.450.40coord: 158..313
e-value: 3.3E-33
score: 117.2
IPR029016GAF-like domain superfamilyGENE3D3.30.450.40coord: 319..493
e-value: 1.6E-31
score: 111.4
coord: 2..144
e-value: 4.9E-22
score: 80.5
NoneNo IPR availablePANTHERPTHR43156:SF2STAGE II SPORULATION PROTEIN Ecoord: 174..328
NoneNo IPR availablePANTHERPTHR43156:SF2STAGE II SPORULATION PROTEIN Ecoord: 419..492
NoneNo IPR availablePANTHERPTHR43156STAGE II SPORULATION PROTEIN E-RELATEDcoord: 419..492
NoneNo IPR availablePANTHERPTHR43156STAGE II SPORULATION PROTEIN E-RELATEDcoord: 71..150
NoneNo IPR availablePANTHERPTHR43156:SF2STAGE II SPORULATION PROTEIN Ecoord: 71..150
NoneNo IPR availablePANTHERPTHR43156STAGE II SPORULATION PROTEIN E-RELATEDcoord: 174..328
NoneNo IPR availableSUPERFAMILY55781GAF domain-likecoord: 7..139
NoneNo IPR availableSUPERFAMILY55781GAF domain-likecoord: 150..325
NoneNo IPR availableSUPERFAMILY55781GAF domain-likecoord: 344..492

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16849contigP-wetherbeei_contig16849:3..1481 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16849.1.1mRNA_P-wetherbeei_contig16849.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16849 3..1481 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16849.1.1 ID=prot_P-wetherbeei_contig16849.1.1|Name=mRNA_P-wetherbeei_contig16849.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=493bp
NRLLGGFSTAAFRFVDGNVHLAAFTPVNPAADTALRADFPRPVHAFEAFQ
LAQQGKPFPISDTEAVVHAPIREIARLQGFRSILFVPLMNGDVPVGIIGV
TRHEPGVFSSNHIQLLQTFADQAVIAIENARLFNEVQQRTEDLSETLQQQ
TATADVLKIISRSAFDLPSVLDTLVSSAALLCGDPQASIYLLRDGLLHLE
AAHNISPEWIAQRRSHPLAPSRDTPSGRAALIGQLDHVPDLLADPDFSRP
DLVELGDHRATLNVPMTREGVTIGVLSLARPTPGPFTQRQVELVQTFADQ
AVIAIENVRLFDEVQTRTRELTEALTYQTGSANILKVIASSPTDVEPVLN
AIVENAADLCDAYDAVLLLKDGDDLRFSAHRGSIPIGLEKWPINRHWSAG
RAVLDKAPVHLHDLLAEENADFSDGRELSRRMGHRSILSVPLLRDNESIG
AIVLRRTEVHPFSDKQISLLQTFADQAVIAIGNVRLFEQVQQR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003018GAF
IPR029016GAF-like_dom_sf