mRNA_P-wetherbeei_contig16847.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16847.1.1
Unique NamemRNA_P-wetherbeei_contig16847.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16847.1.1 vs. uniprot
Match: A0A355TTG2_9BACT (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TTG2_9BACT)

HSP 1 Score: 368 bits (944), Expect = 1.540e-120
Identity = 182/296 (61.49%), Postives = 234/296 (79.05%), Query Frame = 1
Query:   13 KTYSAKDITVLSGLEPVRVRPAMYIGDVSIAGLHHLVWEILDNCIDEVMNGHASLIEVELDKDAGGIRLKDNGRGIPTDIHDEFGKSALELILTTLHAGGKFGDSNYQFSGGLHGVGASVVNALSETLEVTVKRDGYKFFQSYSQGIPKAPVERVSES-RGHGTEIYFKPDPTIFPETTFDPKIILERLEAKSYLHRVNITFTDRSSNTVTKLDH-GQGIDGYLTRLVGTENRHPSYDQ-VFYTQKEQDPRLEMSLQWVDDEGEWVKSYVNGIPTIQGGTHDSGLRAGVSRAMRNF 891
            ++Y+A+DI VL+GLEPVR RP +YIG V  AGLHHL+WEILDN IDEVMNG+A+ +E+ELD+D   IR+ DNGRGIP DIH E+GKSALELI+TTLHAGGKF  +NY +SGGLHGVGASVVNALSE LEVTVKRDG ++FQSY+ G+P APV +V ++ RG GT I+F+PD  IF ET FDPKIIL+ LE++++LH+V I F DR +    KLDH   G+DGYL +LVG E R  ++++ +F  Q+E+D R+E ++ W    GE V+S+VNGI T QGGTHD GL+AG+ +A+RN+
Sbjct:    2 ESYTAQDIQVLTGLEPVRKRPGLYIGSVDSAGLHHLIWEILDNSIDEVMNGYATWVELELDRDGRSIRVTDNGRGIPVDIHQEYGKSALELIMTTLHAGGKFAHANYTYSGGLHGVGASVVNALSERLEVTVKRDGGEWFQSYNFGVPTAPVAQVGDNVRGSGTSIWFRPDEEIFEETIFDPKIILDTLESRAWLHKVKIIFKDRVNGVTHKLDHCDSGLDGYLAQLVGEEPRASAWEENIFSYQREEDIRMEAAVLWSQAGGEHVRSFVNGINTPQGGTHDLGLKAGLVKAVRNY 297          
BLAST of mRNA_P-wetherbeei_contig16847.1.1 vs. uniprot
Match: A0A7X8XN28_9BURK (DNA gyrase subunit B n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XN28_9BURK)

HSP 1 Score: 366 bits (939), Expect = 3.940e-119
Identity = 174/296 (58.78%), Postives = 228/296 (77.03%), Query Frame = 1
Query:    7 PSKTYSAKDITVLSGLEPVRVRPAMYIGDVSIAGLHHLVWEILDNCIDEVMNGHASLIEVELDKDAGGIRLKDNGRGIPTDIHDEFGKSALELILTTLHAGGKFGDSNYQFSGGLHGVGASVVNALSETLEVTVKRDGYKFFQSYSQGIPKAPVERVSESRGHGTEIYFKPDPTIFPETTFDPKIILERLEAKSYLHRVNITFTDRSSNTVTKLDH-GQGIDGYLTRLVGTENRHPSYDQVFYTQKEQDPRLEMSLQWVDDEGEWVKSYVNGIPTIQGGTHDSGLRAGVSRAMRNF 891
            P+  Y A+DI VL+GLEPVR RP +Y+G V  AGLHHLVWEI+DN IDEVMNG+A+ +E+ELD D  GIR+ DNGRGIP D+H+++ K ALELILTTLHAGGKF  SNYQ+SGGLHGVGASVVNALS TLE T++RDG ++FQ++ +G P  P++ +  +RG GT I+F+PDP IF  T FD K+ILE +EA+++LHR+ + F DR+S    +LDH  +G+DGYL +LVG E R   ++ VF   ++ DP+LE++L W    GE V+S+VNG+ T QGGTHD GL+AGV RA+RN+
Sbjct:   56 PTGGYRARDIQVLTGLEPVRKRPGLYVGSVDEAGLHHLVWEIVDNSIDEVMNGYATFVELELDADGQGIRVTDNGRGIPVDLHEKYKKPALELILTTLHAGGKFASSNYQYSGGLHGVGASVVNALSHTLEATIRRDGREWFQAFRRGKPVGPLQDMGTARGTGTSIWFRPDPEIFQTTVFDGKVILETMEARAWLHRMKVVFKDRTSGETHRLDHTSEGLDGYLVQLVGKEPRAEGWETVFTYGRDDDPKLELALLWSASGGEQVRSFVNGVRTPQGGTHDLGLKAGVVRAVRNY 351          
BLAST of mRNA_P-wetherbeei_contig16847.1.1 vs. uniprot
Match: A0A3D1EU14_9BACT (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A3D1EU14_9BACT)

HSP 1 Score: 336 bits (862), Expect = 1.450e-112
Identity = 162/295 (54.92%), Postives = 212/295 (71.86%), Query Frame = 1
Query:   10 SKTYSAKDITVLSGLEPVRVRPAMYIGDVSIAGLHHLVWEILDNCIDEVMNGHASLIEVELDKDAGGIRLKDNGRGIPTDIHDEFGKSALELILTTLHAGGKFGDSNYQFSGGLHGVGASVVNALSETLEVTVKRDGYKFFQSYSQGIPKAPVERVSESRGHGTEIYFKPDPTIFPETTFDPKIILERLEAKSYLHR-VNITFTDRSSNTVTKLDHGQGIDGYLTRLVGTENRHPSYDQVFYTQKEQDPRLEMSLQWVDDEGEWVKSYVNGIPTIQGGTHDSGLRAGVSRAMRNF 891
            + TY+AKDI+VL GL+PVR RP MYIG V  AGLHHLVWEILDN +DE MNGHA+ I V L  D   + + DNGRGIP DIH +  KSALE+ILTTLHAGGKF   NY+ SGGLHGVGASVVNALS+ L  TVK+DG  + QS+  G P AP++++  +RG GT IYF PDPTIFP+T F+P  I +RLE  SY+H+ V + + D+ +       H +GI  YLT+++   N HP +DQ F  +KE    +++ LQW +   E ++SYVNGIPT  GG+H++G+RAG+++A+RN+
Sbjct:    2 TSTYTAKDISVLEGLDPVRKRPGMYIGGVGSAGLHHLVWEILDNSVDEAMNGHATEINVILHDDGTSMTISDNGRGIPVDIHPKLKKSALEIILTTLHAGGKFEGQNYKTSGGLHGVGASVVNALSKKLVATVKKDGKLYEQSFKLGKPIAPIKKMGAARGSGTTIYFHPDPTIFPKTEFNPDTIRDRLEIVSYIHKGVKVVWDDQVNKKKEVFQHNEGIVNYLTKILAQRNAHPVHDQAFVLEKENGIGVQIILQWTESTDEHIRSYVNGIPTASGGSHENGMRAGMTKALRNY 296          
BLAST of mRNA_P-wetherbeei_contig16847.1.1 vs. uniprot
Match: A0A356FFE9_9BACT (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356FFE9_9BACT)

HSP 1 Score: 337 bits (863), Expect = 1.520e-109
Identity = 166/292 (56.85%), Postives = 210/292 (71.92%), Query Frame = 1
Query:   19 YSAKDITVLSGLEPVRVRPAMYIGDVSIAGLHHLVWEILDNCIDEVMNGHASLIEVELDKDAGGIRLKDNGRGIPTDIHDEFGKSALELILTTLHAGGKFGDSNYQFSGGLHGVGASVVNALSETLEVTVKRDGYKFFQSYSQGIPKAPVERVSESRGHGTEIYFKPDPTIFPETTFDPKIILERLEAKSYLHR-VNITFTDRSSNTVTKLDHGQGIDGYLTRLVGTENRHPSYDQVFYTQKEQDPRLEMSLQWVDDEGEWVKSYVNGIPTIQGGTHDSGLRAGVSRAMRNF 891
            YSAKDI+VL GLEPVR+RPAMYIG V   GLHHLVWE++DN IDEV+NGHA+ +EVELDKD+ GI + DNGRGIP D H E  + ALE ILTTLHAGGKF   +Y  SGGLHGVGASVVNALS+ +   VKRDG ++ Q Y +G PK  ++ V + +G GT IYFKPDP IF  T FD K I E LEA++YLHR + I + DR            GI  YL +LV      P++D +FY + +++P++E++LQW D+ GE+++SYVNG+ T  GGTH+ GLR GV RA+RN+
Sbjct:   46 YSAKDISVLKGLEPVRMRPAMYIGGVDKNGLHHLVWEVVDNAIDEVINGHATTVEVELDKDSSGIEVSDNGRGIPVDKHPETNRPALETILTTLHAGGKFDSGSYIHSGGLHGVGASVVNALSKEMIARVKRDGKEYEQRYRRGKPKGDMKLVRKVKGRGTTIYFKPDPEIFRSTKFDTKRIRETLEARAYLHRGLKIIYRDRVKGVTDTFQFDAGIKAYLEKLVKERGFKPTHDFMFYQECKKEPQMEVALQWTDEPGEYIRSYVNGVYTRDGGTHEQGLRTGVVRAVRNY 337          
BLAST of mRNA_P-wetherbeei_contig16847.1.1 vs. uniprot
Match: A0A2E2B8E2_9BACT (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Phycisphaerales TaxID=666506 RepID=A0A2E2B8E2_9BACT)

HSP 1 Score: 335 bits (859), Expect = 9.270e-108
Identity = 162/295 (54.92%), Postives = 213/295 (72.20%), Query Frame = 1
Query:   10 SKTYSAKDITVLSGLEPVRVRPAMYIGDVSIAGLHHLVWEILDNCIDEVMNGHASLIEVELDKDAGGIRLKDNGRGIPTDIHDEFGKSALELILTTLHAGGKFGDSNYQFSGGLHGVGASVVNALSETLEVTVKRDGYKFFQSYSQGIPKAPVERVSESRGHGTEIYFKPDPTIFPETTFDPKIILERLEAKSYLHR-VNITFTDRSSNTVTKLDHGQGIDGYLTRLVGTENRHPSYDQVFYTQKEQDPRLEMSLQWVDDEGEWVKSYVNGIPTIQGGTHDSGLRAGVSRAMRNF 891
            + TY+AKDI+VL GLEPVR RP MYIG VS AGLHHLVWE+LDN +DE MNGHA+ I V L  D   + + DNGRGIP DIH +  KSALE+ILTTLHAGGKF   NY+ SGGLHGVGASVVNALS+ L  TVK+DG+ + Q++  G P  P++++  +RG GT IYF PDPTIFP+T F+P  I +RLE  SY+H+ V + + D+ S       H +GI  YLT+++   +  P +DQ F  +KE   R+++ LQW +   E ++SYVNGIPT  GG+H++GLRAG+++A+RN+
Sbjct:    2 TSTYTAKDISVLEGLEPVRKRPGMYIGGVSSAGLHHLVWEVLDNSVDEAMNGHATEITVTLHDDGTSMTIADNGRGIPVDIHPKLKKSALEIILTTLHAGGKFEGQNYKTSGGLHGVGASVVNALSKKLVATVKKDGHTYEQTFKLGKPTGPIKKIGTARGSGTTIYFHPDPTIFPKTEFNPDTIRDRLEIVSYIHKGVKVIWDDQLSKKKEVFQHEEGIVNYLTKIMAQRSARPVHDQPFVLEKENGIRVQIILQWTESTDEHLRSYVNGIPTGSGGSHENGLRAGMTKALRNY 296          
BLAST of mRNA_P-wetherbeei_contig16847.1.1 vs. uniprot
Match: A0A3N5YRY9_9BACT (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3N5YRY9_9BACT)

HSP 1 Score: 326 bits (836), Expect = 7.640e-107
Identity = 159/293 (54.27%), Postives = 205/293 (69.97%), Query Frame = 1
Query:   16 TYSAKDITVLSGLEPVRVRPAMYIGDVSIAGLHHLVWEILDNCIDEVMNGHASLIEVELDKDAGGIRLKDNGRGIPTDIHDEFGKSALELILTTLHAGGKFGDSNYQFSGGLHGVGASVVNALSETLEVTVKRDGYKFFQSYSQGIPKAPVERVSESRGHGTEIYFKPDPTIFPETTFDPKIILERLEAKSYLHR-VNITFTDRSSNTVTKLDHGQGIDGYLTRLVGTENRHPSYDQVFYTQKEQDPRLEMSLQWVDDEGEWVKSYVNGIPTIQGGTHDSGLRAGVSRAMRNF 891
            +Y+AKDITVL GLEPVR RP MYIG V  AGLHHL WEILDN IDE MNGHAS I+V L  D   + + D+GRGIP D H +  KSALE+I T LHAGGKFG  +Y+ +GGLHGVGASVVNALS+ L  TV+RDG  + Q + QG P  P++++  +RG GT +YF PDPTIFP+  F+P +I ERLE  SYLH+ + + F D+S+ +    +H +GI  +L  +V T    P ++  F   +E   R E+ LQW +   E +KSYVNGIPT  GGTH++GLRAG+ +A+RN+
Sbjct:    4 SYTAKDITVLEGLEPVRKRPGMYIGGVGSAGLHHLAWEILDNSIDEAMNGHASTIQVTLHADGASLTVSDDGRGIPVDKHPQTKKSALEVIFTVLHAGGKFGHDSYKTAGGLHGVGASVVNALSKELVATVRRDGASWEQRFKQGNPLGPIKKLGAARGTGTTVYFHPDPTIFPKIEFEPSVIRERLETASYLHKGLKVVFDDQSNGSKEVFEHQEGIVDFLRNVVATRGAKPVHEAPFTLSRENGLRAEVVLQWTEATDEHLKSYVNGIPTASGGTHENGLRAGLGKAVRNY 296          
BLAST of mRNA_P-wetherbeei_contig16847.1.1 vs. uniprot
Match: A0A2E6NSE6_9BACT (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E6NSE6_9BACT)

HSP 1 Score: 332 bits (851), Expect = 4.570e-106
Identity = 165/292 (56.51%), Postives = 208/292 (71.23%), Query Frame = 1
Query:   19 YSAKDITVLSGLEPVRVRPAMYIGDVSIAGLHHLVWEILDNCIDEVMNGHASLIEVELDKDAGGIRLKDNGRGIPTDIHDEFGKSALELILTTLHAGGKFGDSNYQFSGGLHGVGASVVNALSETLEVTVKRDGYKFFQSYSQGIPKAPVERVSESRGHGTEIYFKPDPTIFPETTFDPKIILERLEAKSYLHR-VNITFTDRSSNTVTKLDHGQGIDGYLTRLVGTENRHPSYDQVFYTQKEQDPRLEMSLQWVDDEGEWVKSYVNGIPTIQGGTHDSGLRAGVSRAMRNF 891
            Y+AKDI+VL GLEPVR+RPAMYIG +   GLHHLVWEI+DN IDEV+NGHA+ +EV LDKD+ GI + DNGRGIP D H E  + ALE ILTTLHAGGKF   NY  SGGLHGVG+SVVNALS+ L   VKR G ++ Q Y +G P++ ++ V + +G GT I+FKPDP IF  T FD K I E LEA++YLH  + I + DRS  T        GI  YL +LV      P+ D +FY   E++PR+E++LQW D+ GE+++SYVNG+ T  GGTH+ GLR GV RA+RN+
Sbjct:   49 YNAKDISVLKGLEPVRMRPAMYIGGIDKNGLHHLVWEIVDNAIDEVINGHATTVEVALDKDSCGIEISDNGRGIPIDKHPETKRPALETILTTLHAGGKFDSGNYIHSGGLHGVGSSVVNALSKELVARVKRSGKEYEQRYVRGKPRSDMKLVRKVKGRGTTIHFKPDPEIFRSTKFDTKKIRETLEARAYLHSGLKIVYRDRSKRTTETFQFDDGIQAYLEKLVKDRGFKPTCDFMFYLAAEKEPRMEVALQWTDEPGEYIRSYVNGVYTRDGGTHEQGLRTGVVRAVRNY 340          
BLAST of mRNA_P-wetherbeei_contig16847.1.1 vs. uniprot
Match: A0A6N9DXX7_9BACT (DNA topoisomerase (ATP-hydrolyzing) n=7 Tax=unclassified Nitrospira TaxID=2652172 RepID=A0A6N9DXX7_9BACT)

HSP 1 Score: 329 bits (844), Expect = 2.180e-105
Identity = 170/307 (55.37%), Postives = 212/307 (69.06%), Query Frame = 1
Query:   10 SKTYSAKDITVLSGLEPVRVRPAMYIGDVSIAGLHHLVWEILDNCIDEVMNGHASLIEVELDKDAGGIRLKDNGRGIPTDIHDEFGKSALELILTTLHAGGKFGDSNYQFSGGLHGVGASVVNALSETLEVTVKRDGYKFFQSYSQGIPKAPVERVSESRGHGTEIYFKPDPTIF-PETTFDPKIILERLEAKSYLHR-VNITFTDRSSNTVTKLDHGQGIDGYLTRLVGTENRHPSYDQVFYTQKEQDPR-----------LEMSLQWVDDEGEWVKSYVNGIPTIQGGTHDSGLRAGVSRAMRNF 891
            +K Y A +I VL G++PVR RPAMYIG     GLHHLVWEILDN IDEVMNG+A+ I VELDK+ GGIR+ DNGRGIP D H +  KSALE+I+TTLHAGGKF   +Y  SGGLHGVGASVVNALS+ LEVTVKR GY++ Q Y  G P  PV + +  RG GT +YF+PDP IF  +TTFD  ++   LEAKSYLH+ + ITF D  S       H QGI+ YLT+LV   N  P+ D VFY ++  D             +E++LQW D+  E+V+SYVNG+ T  GG H+SGLR+G+ +A+R +
Sbjct:    2 TKKYDASEILVLEGIDPVRRRPAMYIGGTDKTGLHHLVWEILDNAIDEVMNGYATTITVELDKNGGGIRVTDNGRGIPVDRHKQHKKSALEIIMTTLHAGGKFETGSYIHSGGLHGVGASVVNALSDHLEVTVKRHGYEWQQQYRAGKPLEPVTKGNAVRGTGTSVYFRPDPAIFGKQTTFDSTLLRHTLEAKSYLHKGLKITFKDGPSQHTHDFVHEQGIEEYLTKLVKDRNHKPTADFVFYLERRLDDNGKPTTADDGFAMEVALQWTDEPAEFVRSYVNGVATPNGGAHESGLRSGIVKAVRQY 308          
BLAST of mRNA_P-wetherbeei_contig16847.1.1 vs. uniprot
Match: A0A3M2AYE4_9BACT (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A3M2AYE4_9BACT)

HSP 1 Score: 329 bits (844), Expect = 2.180e-105
Identity = 170/307 (55.37%), Postives = 217/307 (70.68%), Query Frame = 1
Query:   10 SKTYSAKDITVLSGLEPVRVRPAMYIGDVSIAGLHHLVWEILDNCIDEVMNGHASLIEVELDKDAGGIRLKDNGRGIPTDIHDEFGKSALELILTTLHAGGKFGDSNYQFSGGLHGVGASVVNALSETLEVTVKRDGYKFFQSYSQGIPKAPVERVSESRGHGTEIYFKPDPTIFPE-TTFDPKIILERLEAKSYLHR-VNITFTDRSSNTVTKLDHGQGIDGYLTRLVGTENRHPSYDQVFYTQK----EQDP-------RLEMSLQWVDDEGEWVKSYVNGIPTIQGGTHDSGLRAGVSRAMRNF 891
            SKTY+A+DI VL G+EPVR RPAMYIG     GLHHLV EI+DN +DEVMNG+AS I VELD+   GIR+ DNGRGIP D H  + KSALE+I+TTLHAGGKF   +Y  SGGLHGVGASVVNALS+ LEVTVKRDGY++ Q+Y  G P+ PV R   +R  GT +YF+PDP IF + TTFDP ++ E LEA++YLH+ + I F D ++N   +  H QGI  YL +LV    R P+ D +FY ++    +QD        RLE++LQW D+  E+++SYVNG+ T  GGTH+SGLR  + +A R +
Sbjct:    2 SKTYNARDIVVLEGIEPVRRRPAMYIGGTDKTGLHHLVGEIVDNAVDEVMNGYASRITVELDRHGDGIRITDNGRGIPVDRHPLYRKSALEIIMTTLHAGGKFETGSYLHSGGLHGVGASVVNALSQYLEVTVKRDGYEWQQTYRAGKPQGPVTRKKATRETGTSVYFQPDPAIFGKRTTFDPTLLKETLEARAYLHKGLTIVFHDGTTNETHEFVHKQGIQEYLRKLVSERGRKPTADFLFYLERSSRTDQDSQTSDQRFRLEVALQWTDEPAEFIRSYVNGVATPSGGTHESGLRTAIVKAARQY 308          
BLAST of mRNA_P-wetherbeei_contig16847.1.1 vs. uniprot
Match: A0A3M2DAW1_9BACT (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A3M2DAW1_9BACT)

HSP 1 Score: 327 bits (838), Expect = 1.960e-104
Identity = 165/308 (53.57%), Postives = 212/308 (68.83%), Query Frame = 1
Query:   10 SKTYSAKDITVLSGLEPVRVRPAMYIGDVSIAGLHHLVWEILDNCIDEVMNGHASLIEVELDKDAGGIRLKDNGRGIPTDIHDEFGKSALELILTTLHAGGKFGDSNYQFSGGLHGVGASVVNALSETLEVTVKRDGYKFFQSYSQGIPKAPVERVSESRGHGTEIYFKPDPTIF-PETTFDPKIILERLEAKSYLHR-VNITFTDRSSNTVTKLDHGQGIDGYLTRLVGTENRHPSYDQVFYTQK------------EQDPRLEMSLQWVDDEGEWVKSYVNGIPTIQGGTHDSGLRAGVSRAMRNF 891
            + TY A DI VL G+EPVR RPAMYIG    AGLHHLVWEILDN IDEV+NG+A+ I VELD    GIR+ DNGRGIP + H ++ KSALE+++TTLHAGGKF   +Y  SGGLHGVGASVVNALS  LEV VKR G ++ Q+Y  G+P+ PV+R+  +RG GT +YF+PDP IF  +  FDP ++ E LEAK+YLH+ +N+ F D +S       H QGI  +L +LV    R P+ D VFY  +            E    LE++LQW D+  E+V+S+VNG+ T  GGTH+ GLRAG+ +A+RN+
Sbjct:    6 ANTYDASDILVLEGIEPVRRRPAMYIGGTDKAGLHHLVWEILDNAIDEVINGYATTITVELDATRDGIRITDNGRGIPVEPHPKYNKSALEIVMTTLHAGGKFDSGSYIHSGGLHGVGASVVNALSRFLEVRVKRGGAEWLQTYRAGVPQGPVKRIGTARGTGTSVYFRPDPAIFGKQVAFDPAVLKEALEAKAYLHKGLNLIFRDGTSGQTHHFVHEQGIQEFLVKLVAERGRKPTADFVFYLDRKLTGENGKARPSEAGFGLEVALQWTDEPAEFVRSFVNGVATPSGGTHEIGLRAGIVKAVRNY 313          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16847.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A355TTG2_9BACT1.540e-12061.49DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=bacter... [more]
A0A7X8XN28_9BURK3.940e-11958.78DNA gyrase subunit B n=1 Tax=Burkholderiales bacte... [more]
A0A3D1EU14_9BACT1.450e-11254.92DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1... [more]
A0A356FFE9_9BACT1.520e-10956.85DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1... [more]
A0A2E2B8E2_9BACT9.270e-10854.92DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Phycis... [more]
A0A3N5YRY9_9BACT7.640e-10754.27DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1... [more]
A0A2E6NSE6_9BACT4.570e-10656.51DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Planct... [more]
A0A6N9DXX7_9BACT2.180e-10555.37DNA topoisomerase (ATP-hydrolyzing) n=7 Tax=unclas... [more]
A0A3M2AYE4_9BACT2.180e-10555.37DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Nitros... [more]
A0A3M2DAW1_9BACT1.960e-10453.57DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Nitros... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16847contigP-wetherbeei_contig16847:590..1480 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog344747.PM8797T_08834
PFAMsDNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim
Model size891
Max annot lvl203682|Planctomycetes
KEGG koko:K02470,ko:K02622
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.44e-98
EggNOG OGsCOG0187@1|root,COG0187@2|Bacteria,2IWXP@203682|Planctomycetes
EC5.99.1.3
DescriptionCOG0187 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit
Cds size891
COG categoryL
BRITEko00000,ko01000,ko02048,ko03032,ko03036,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186099.4295182-CDS-P-wetherbeei_contig16847:589..14801683186099.4295182-CDS-P-wetherbeei_contig16847:589..1480Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16847 590..1480 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16847.1.1prot_P-wetherbeei_contig16847.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16847 590..1480 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16847.1.1

>prot_P-wetherbeei_contig16847.1.1 ID=prot_P-wetherbeei_contig16847.1.1|Name=mRNA_P-wetherbeei_contig16847.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=297bp
MPPSKTYSAKDITVLSGLEPVRVRPAMYIGDVSIAGLHHLVWEILDNCID
EVMNGHASLIEVELDKDAGGIRLKDNGRGIPTDIHDEFGKSALELILTTL
HAGGKFGDSNYQFSGGLHGVGASVVNALSETLEVTVKRDGYKFFQSYSQG
IPKAPVERVSESRGHGTEIYFKPDPTIFPETTFDPKIILERLEAKSYLHR
VNITFTDRSSNTVTKLDHGQGIDGYLTRLVGTENRHPSYDQVFYTQKEQD
PRLEMSLQWVDDEGEWVKSYVNGIPTIQGGTHDSGLRAGVSRAMRNF
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mRNA from alignment at P-wetherbeei_contig16847:590..1480+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16847.1.1 ID=mRNA_P-wetherbeei_contig16847.1.1|Name=mRNA_P-wetherbeei_contig16847.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=891bp|location=Sequence derived from alignment at P-wetherbeei_contig16847:590..1480+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCTCCAAGTAAGACATACAGCGCCAAAGACATTACCGTACTCTCTGG CCTTGAACCAGTTCGGGTTCGTCCAGCCATGTACATCGGTGATGTCTCCA TCGCCGGTCTGCATCATCTCGTCTGGGAAATCTTGGACAACTGTATCGAC GAGGTCATGAACGGTCACGCCAGCCTGATCGAGGTCGAACTCGACAAGGA CGCCGGCGGAATCCGACTCAAGGACAATGGACGCGGAATCCCCACTGATA TCCATGACGAATTCGGCAAGTCGGCCCTGGAGTTGATCTTGACGACGCTC CATGCGGGCGGCAAGTTCGGTGATTCGAACTACCAGTTTTCCGGCGGTCT CCACGGTGTAGGTGCGTCCGTCGTGAACGCCCTCTCCGAGACGCTAGAAG TGACCGTCAAGCGCGACGGATACAAGTTTTTTCAGTCTTACAGCCAGGGC ATTCCCAAGGCGCCCGTGGAGCGCGTCAGCGAATCGCGCGGCCACGGCAC GGAAATCTACTTCAAACCCGACCCCACGATTTTTCCAGAAACGACCTTCG ATCCCAAAATCATTCTGGAAAGACTCGAGGCGAAGTCGTATCTGCATCGC GTGAACATTACGTTTACGGACCGCAGCAGCAATACCGTAACCAAGCTCGA CCACGGTCAGGGTATCGACGGCTACCTCACGCGCCTTGTAGGAACCGAGA ACCGTCACCCATCGTATGACCAGGTCTTCTACACGCAAAAAGAGCAGGAC CCTCGCCTTGAGATGTCCCTCCAGTGGGTGGATGACGAAGGCGAATGGGT CAAAAGCTACGTCAATGGTATCCCTACCATCCAGGGTGGGACGCACGATT CCGGCCTGCGCGCTGGCGTTTCCAGAGCCATGCGTAACTTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16847:590..1480+

>mRNA_P-wetherbeei_contig16847.1.1 ID=mRNA_P-wetherbeei_contig16847.1.1|Name=mRNA_P-wetherbeei_contig16847.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=891bp|location=Sequence derived from alignment at P-wetherbeei_contig16847:590..1480+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCTCCAAGTAAGACATACAGCGCCAAAGACATTACCGTACTCTCTGG
CCTTGAACCAGTTCGGGTTCGTCCAGCCATGTACATCGGTGATGTCTCCA
TCGCCGGTCTGCATCATCTCGTCTGGGAAATCTTGGACAACTGTATCGAC
GAGGTCATGAACGGTCACGCCAGCCTGATCGAGGTCGAACTCGACAAGGA
CGCCGGCGGAATCCGACTCAAGGACAATGGACGCGGAATCCCCACTGATA
TCCATGACGAATTCGGCAAGTCGGCCCTGGAGTTGATCTTGACGACGCTC
CATGCGGGCGGCAAGTTCGGTGATTCGAACTACCAGTTTTCCGGCGGTCT
CCACGGTGTAGGTGCGTCCGTCGTGAACGCCCTCTCCGAGACGCTAGAAG
TGACCGTCAAGCGCGACGGATACAAGTTTTTTCAGTCTTACAGCCAGGGC
ATTCCCAAGGCGCCCGTGGAGCGCGTCAGCGAATCGCGCGGCCACGGCAC
GGAAATCTACTTCAAACCCGACCCCACGATTTTTCCAGAAACGACCTTCG
ATCCCAAAATCATTCTGGAAAGACTCGAGGCGAAGTCGTATCTGCATCGC
GTGAACATTACGTTTACGGACCGCAGCAGCAATACCGTAACCAAGCTCGA
CCACGGTCAGGGTATCGACGGCTACCTCACGCGCCTTGTAGGAACCGAGA
ACCGTCACCCATCGTATGACCAGGTCTTCTACACGCAAAAAGAGCAGGAC
CCTCGCCTTGAGATGTCCCTCCAGTGGGTGGATGACGAAGGCGAATGGGT
CAAAAGCTACGTCAATGGTATCCCTACCATCCAGGGTGGGACGCACGATT
CCGGCCTGCGCGCTGGCGTTTCCAGAGCCATGCGTAACTTC
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