prot_P-wetherbeei_contig1684.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1684.1.1
Unique Nameprot_P-wetherbeei_contig1684.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length595
Homology
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BLAST of mRNA_P-wetherbeei_contig1684.1.1 vs. uniprot
Match: A0A1W4X132_AGRPL (charged multivesicular body protein 7 isoform X1 n=2 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4X132_AGRPL)

HSP 1 Score: 62.8 bits (151), Expect = 9.930e-7
Identity = 41/122 (33.61%), Postives = 59/122 (48.36%), Query Frame = 0 
Query:   29 LQPDWGDEHRMGYLM----SAGLDPSTDADKLAFWSAAVKHYCEQATEISIDLDRLRRTLSRNGNTALGLEGALQAMATRGEMLPRRKVLLSETPS-TWSGWLLNVLVVRPARAAFASVRLS 145
            L P W DE RM  L     S   +P     KLAFW   ++ YC+++      L  L +  +RNG +   LE  +  M    E+    + L  ETPS +W+GW   VLV +P +  F +V+ S
Sbjct:    8 LPPCWNDETRMNVLFAPFRSRNANPQDWDSKLAFWRNMIELYCKESKCYKFTLPDLLKVFNRNGRSPGCLEVVINEMFKLNEIKSVSEYL-EETPSKSWTGWATQVLVKKPIKWTFHTVKNS 128
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1684.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1W4X132_AGRPL9.930e-733.61charged multivesicular body protein 7 isoform X1 n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 308..335
IPR005024Snf7 familyPFAMPF03357Snf7coord: 311..475
e-value: 2.4E-10
score: 40.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1684contigP-wetherbeei_contig1684:1247..4044 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1684.1.1mRNA_P-wetherbeei_contig1684.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1684 654..4078 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1684.1.1 ID=prot_P-wetherbeei_contig1684.1.1|Name=mRNA_P-wetherbeei_contig1684.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=595bp
MSFPPAPPSPPPCCPICKEGPDANASCPLQPDWGDEHRMGYLMSAGLDPS
TDADKLAFWSAAVKHYCEQATEISIDLDRLRRTLSRNGNTALGLEGALQA
MATRGEMLPRRKVLLSETPSTWSGWLLNVLVVRPARAAFASVRLSSEGSA
PPLDGAEPYVFRDVLEDLAACVAEYCSAAEDDSQMLVLTADPSAATAIAR
NGAASSSAASGSRSVRTFLTRVGEAVGSSSTSNAVRAPAAGERHSAAAAH
LRSISEADAGALAAYMVATRRAARAGRVVKFGGRAAGAAATSAAVKAGLQ
ISEADQHMLFLRCTVDKLRTEAERLQAQADAAAADALREKRTGHAAMALL
HMRRRKRANDLLMLRLDCLTNLEHCLEKVEGMRVDKQVLEAQELAARAMR
AFREQHHLTAERVDDAIFDMAEELEAADAFGTALGDAGRAAEERAGIFAG
GGAREVDDALAAELVALEAEVAAERPVAAMGATAAVTVVAAARTATAASV
AEAAAAAETAETAETQTAVAIEWAAVPEQIQTAEVPASAGAPATPAVPGP
FTAGLAAGSGRPLVDLTGQEGLAAPSASRAAARAMGLNRVALPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam