mRNA_P-wetherbeei_contig16830.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16830.1.1
Unique NamemRNA_P-wetherbeei_contig16830.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16830.1.1 vs. uniprot
Match: A0A3R9ZMC4_9HYPH (ABC transporter substrate-binding protein n=3 Tax=Aquibium TaxID=2911176 RepID=A0A3R9ZMC4_9HYPH)

HSP 1 Score: 433 bits (1113), Expect = 1.980e-149
Identity = 212/270 (78.52%), Postives = 245/270 (90.74%), Query Frame = 1
Query:   67 TAGAQGTIKVGNIVVTSGPLKGPGEPALSAVDIAIEEINATGGVNGRKIELIRFDTGSDPRQASVGTRKLAQDDGVVAIVGPFSSGESSVAFNDAERLKILMMPTSATAPGLTEGRKYAWRLAEDERVQFSRLLQSLKSKGIKSDTAEIVYVSDEVIANVAGTKSYPPLLEAAGIKFGTPISVQYKSFDMSAQAAQILKSNPDLVAIAALPESASKVIKELRRQGYKGRIIGSQIFADPNIVELFGPEGEGTFVVAGFWKGKTAASQRFN 876
            TA AQ TIK+GNIVVT+GPLKGPGEP L+A+DIA+EEINA GG+NG+ IE++RFDTGSDP+QASVGTRKLAQDDGV+AI GPFSSGES+VA NDAERLK+LMMPTSA+APGLT+GR Y WRL EDE  QF RLL+S+K+ GIK+DTAEIVY+S+EV++N AGTK YP LL  AGIK G PI+VQYKSFDMSAQAAQI+++NPDLVAIAALPESASKVIKELRRQG++GRIIGSQIFADPN+ ELFGPEG+GT +VAGFWKG+T ASQ FN
Sbjct:   23 TAYAQETIKIGNIVVTAGPLKGPGEPTLTAIDIAVEEINAAGGINGKPIEIVRFDTGSDPKQASVGTRKLAQDDGVLAIAGPFSSGESAVALNDAERLKVLMMPTSASAPGLTDGRTYGWRLTEDETKQFGRLLKSIKANGIKADTAEIVYISEEVVSNAAGTKLYPALLAEAGIKHGNPIAVQYKSFDMSAQAAQIMQANPDLVAIAALPESASKVIKELRRQGFQGRIIGSQIFADPNVAELFGPEGDGTLLVAGFWKGRTEASQSFN 292          
BLAST of mRNA_P-wetherbeei_contig16830.1.1 vs. uniprot
Match: A0A2G2CYF4_9HYPH (Peripla_BP_6 domain-containing protein n=1 Tax=Hoeflea sp. TaxID=1940281 RepID=A0A2G2CYF4_9HYPH)

HSP 1 Score: 422 bits (1084), Expect = 4.240e-145
Identity = 215/283 (75.97%), Postives = 250/283 (88.34%), Query Frame = 1
Query:   28 ILATALLSCVCCTTAGAQGTIKVGNIVVTSGPLKGPGEPALSAVDIAIEEINATGGVNGRKIELIRFDTGSDPRQASVGTRKLAQDDGVVAIVGPFSSGESSVAFNDAERLKILMMPTSATAPGLTEGRKYAWRLAEDERVQFSRLLQSLKSKGIKSDTAEIVYVSDEVIANVAGTKSYPPLLEAAGIKFGTPISVQYKSFDMSAQAAQILKSNPDLVAIAALPESASKVIKELRRQGYKGRIIGSQIFADPNIVELFGPEGEGTFVVAGFWKGKTAASQRFN 876
            ILA A LS +  +TA A+ TIK+GNIVVT+G LK  GEP L+AVDIA++EINA+GG+NG+++E+IRFDTGSDP+QASVGTRKLAQDDGV+AIVGPFSSGES+VAFNDAERLK+LMMPTSA+APGLTEGRKY WRL EDE  QF RLL+SLK+ GIKSDTAEIVY+S+EV++N AGTK YP LL+ AGI  G PI VQYKSFDMSAQAAQI+ SNPDLVAIAALP+SASKVI ELRRQGY+GRIIGSQIF+DPN+VELFGPEG GT ++AGFWKG +  +Q FN
Sbjct:    6 ILAAAALSLLA-STAWAEDTIKIGNIVVTAGFLKSAGEPTLTAVDIAVDEINASGGINGKQVEVIRFDTGSDPKQASVGTRKLAQDDGVLAIVGPFSSGESAVAFNDAERLKVLMMPTSASAPGLTEGRKYGWRLTEDEHKQFGRLLKSLKANGIKSDTAEIVYISEEVVSNAAGTKLYPALLKEAGITHGDPIPVQYKSFDMSAQAAQIMASNPDLVAIAALPDSASKVIGELRRQGYEGRIIGSQIFSDPNVVELFGPEGNGTMLMAGFWKGFSPEAQAFN 287          
BLAST of mRNA_P-wetherbeei_contig16830.1.1 vs. uniprot
Match: A0A7W4VQV6_9HYPH (Branched-chain amino acid transport system substrate-binding protein n=1 Tax=Microvirga lupini TaxID=420324 RepID=A0A7W4VQV6_9HYPH)

HSP 1 Score: 409 bits (1052), Expect = 3.290e-140
Identity = 202/267 (75.66%), Postives = 236/267 (88.39%), Query Frame = 1
Query:   76 AQGTIKVGNIVVTSGPLKGPGEPALSAVDIAIEEINATGGVNGRKIELIRFDTGSDPRQASVGTRKLAQDDGVVAIVGPFSSGESSVAFNDAERLKILMMPTSATAPGLTEGRKYAWRLAEDERVQFSRLLQSLKSKGIKSDTAEIVYVSDEVIANVAGTKSYPPLLEAAGIKFGTPISVQYKSFDMSAQAAQILKSNPDLVAIAALPESASKVIKELRRQGYKGRIIGSQIFADPNIVELFGPEGEGTFVVAGFWKGKTAASQRFN 876
            AQ TIKVGNIV T+GPLK     A+ A D+A+E+INA GG+NG+KIELIRFDTGSDP+QASVG RKLAQDD V+AI+GPFSSGESSVAFNDAERLKIL +PTSA+ PGLT+GRKY WRL+EDE  QFSRLL+++K KG+K++TAEIVY+S+EV++N AGTK YP LL  AGIK G P+++QYKSFDMSAQAA+IL+SNPD VA+AALPESASKV KELRRQGYKGRIIGSQIFADPN+VELFGPEGEGT VVAGFW+G+T  +Q FN
Sbjct:   23 AQETIKVGNIVATAGPLKSVASQAVVAFDLAVEKINAAGGINGKKIELIRFDTGSDPKQASVGVRKLAQDDKVLAILGPFSSGESSVAFNDAERLKILTIPTSASTPGLTDGRKYGWRLSEDETKQFSRLLKAMKEKGLKTETAEIVYISEEVVSNTAGTKLYPALLAQAGIKHGEPMAIQYKSFDMSAQAAKILQSNPDFVAVAALPESASKVTKELRRQGYKGRIIGSQIFADPNVVELFGPEGEGTMVVAGFWRGRTPEAQEFN 289          
BLAST of mRNA_P-wetherbeei_contig16830.1.1 vs. uniprot
Match: UPI001AE99CAC (ABC transporter substrate-binding protein n=1 Tax=Neorhizobium galegae TaxID=399 RepID=UPI001AE99CAC)

HSP 1 Score: 404 bits (1037), Expect = 6.240e-138
Identity = 197/267 (73.78%), Postives = 234/267 (87.64%), Query Frame = 1
Query:   76 AQGTIKVGNIVVTSGPLKGPGEPALSAVDIAIEEINATGGVNGRKIELIRFDTGSDPRQASVGTRKLAQDDGVVAIVGPFSSGESSVAFNDAERLKILMMPTSATAPGLTEGRKYAWRLAEDERVQFSRLLQSLKSKGIKSDTAEIVYVSDEVIANVAGTKSYPPLLEAAGIKFGTPISVQYKSFDMSAQAAQILKSNPDLVAIAALPESASKVIKELRRQGYKGRIIGSQIFADPNIVELFGPEGEGTFVVAGFWKGKTAASQRFN 876
            A+ TIK+GN+V T+G LKG  EPA+ A D+A+ EINA GG+NG+K+E +RFDT SDP+QASVG RKLAQDDGV+AI+GPFSSGES+VAFNDAERLK+LMMP SA+ PGLT+G+ Y WRL+EDE  QF RLL+S+K++GIK+DTAEIVY+S+EV++N AGTK YP LL   GIK G PI+VQYKSFDMSAQAA+IL+SNPD+VA+AA P+SASKVIKELRRQGYKGRIIGSQIFADPN+VELFGPEGEGT +VAGFWKG  A SQ FN
Sbjct:   23 AEDTIKIGNLVATAGFLKGVAEPAVVAADVALAEINAAGGINGKKVEFVRFDTSSDPKQASVGARKLAQDDGVLAILGPFSSGESAVAFNDAERLKVLMMPNSASTPGLTDGKTYGWRLSEDEEKQFRRLLKSIKARGIKADTAEIVYISEEVVSNSAGTKLYPKLLAEMGIKHGDPIAVQYKSFDMSAQAARILQSNPDIVALAATPDSASKVIKELRRQGYKGRIIGSQIFADPNVVELFGPEGEGTMLVAGFWKGFNARSQAFN 289          
BLAST of mRNA_P-wetherbeei_contig16830.1.1 vs. uniprot
Match: UPI0013EB6280 (ABC transporter substrate-binding protein n=1 Tax=Rhizobium pseudoryzae TaxID=379684 RepID=UPI0013EB6280)

HSP 1 Score: 403 bits (1036), Expect = 8.860e-138
Identity = 203/289 (70.24%), Postives = 245/289 (84.78%), Query Frame = 1
Query:   10 MKTKVQILATALLSCVCCTTAGAQGTIKVGNIVVTSGPLKGPGEPALSAVDIAIEEINATGGVNGRKIELIRFDTGSDPRQASVGTRKLAQDDGVVAIVGPFSSGESSVAFNDAERLKILMMPTSATAPGLTEGRKYAWRLAEDERVQFSRLLQSLKSKGIKSDTAEIVYVSDEVIANVAGTKSYPPLLEAAGIKFGTPISVQYKSFDMSAQAAQILKSNPDLVAIAALPESASKVIKELRRQGYKGRIIGSQIFADPNIVELFGPEGEGTFVVAGFWKGKTAASQRFN 876
            MK+  + LA+  L+      A A+ TIK+GNIV T+G LK   EPA+ A DIA++EINA GG+NG+K+EL+RF+  SDP+QASVG RKLAQDDGV+AI+GPFSS E SVA NDAERLK+LMMP SA+ PGLT+G+ Y++RL+EDE  QFSRLL+S+K+KG+K+DTAEIVY+SDEV++N AGTK YP LLEAAGIK G+PI+VQYKSFDMSAQAAQI++SNPD+VAIA  P SASKVIKELRRQGYKGRIIGSQIFADPN++ELFGPEG+GT +VAGFWKG  A SQ FN
Sbjct:    1 MKSGFRFLASVALTVFVSGPALAEDTIKIGNIVTTAGVLKSIAEPAVVAADIAVDEINAAGGINGKKVELVRFEASSDPKQASVGARKLAQDDGVLAILGPFSSAEFSVALNDAERLKVLMMPNSASTPGLTDGKTYSYRLSEDESKQFSRLLKSIKAKGVKADTAEIVYISDEVVSNAAGTKLYPALLEAAGIKHGSPIAVQYKSFDMSAQAAQIMQSNPDIVAIAGTPPSASKVIKELRRQGYKGRIIGSQIFADPNVLELFGPEGDGTLLVAGFWKGFNARSQAFN 289          
BLAST of mRNA_P-wetherbeei_contig16830.1.1 vs. uniprot
Match: A0A1W2DMM4_9HYPH (Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Rhizobium sp. RU36D TaxID=1907415 RepID=A0A1W2DMM4_9HYPH)

HSP 1 Score: 400 bits (1028), Expect = 1.450e-136
Identity = 201/289 (69.55%), Postives = 239/289 (82.70%), Query Frame = 1
Query:   10 MKTKVQILATALLSCVCCTTAGAQGTIKVGNIVVTSGPLKGPGEPALSAVDIAIEEINATGGVNGRKIELIRFDTGSDPRQASVGTRKLAQDDGVVAIVGPFSSGESSVAFNDAERLKILMMPTSATAPGLTEGRKYAWRLAEDERVQFSRLLQSLKSKGIKSDTAEIVYVSDEVIANVAGTKSYPPLLEAAGIKFGTPISVQYKSFDMSAQAAQILKSNPDLVAIAALPESASKVIKELRRQGYKGRIIGSQIFADPNIVELFGPEGEGTFVVAGFWKGKTAASQRFN 876
            MK   ++LAT  L         A+ TIK+GNIV T+GPLK  GEPA+ A DIA+ EINA GG+NG+K+ELIRFDTGSDP+QA+VGTRKL QDDGV+AI+GPFSSGES+VAFNDA+RLK+LM+P +A+APGLT+ R YAWRL EDE  QF+RLL S+K+ GIK DTAEIVY+S+E ++N +GTK YP +    GIK G PI+VQYKSFDMSAQAA+IL+SNPD+VAIA L ESASKVIKELRRQGYKGRIIGSQIFADP +VELFGPEGEGT +VAGFWKG+T  S  F+
Sbjct:    1 MKRTARLLATLALPMFLAGPLHAENTIKIGNIVATAGPLKSVGEPAVVAADIAVAEINAAGGINGKKVELIRFDTGSDPKQAAVGTRKLVQDDGVLAILGPFSSGESAVAFNDADRLKVLMIPNAASAPGLTDNRAYAWRLTEDEPKQFTRLLTSMKAHGIKMDTAEIVYISEEAVSNASGTKLYPAIFAKFGIKHGEPIAVQYKSFDMSAQAAKILQSNPDMVAIAGLQESASKVIKELRRQGYKGRIIGSQIFADPTVVELFGPEGEGTMMVAGFWKGRTDKSMAFD 289          
BLAST of mRNA_P-wetherbeei_contig16830.1.1 vs. uniprot
Match: A0A1R3TNK5_9HYPH (ABC transporter substrate-binding protein n=2 Tax=Agrobacterium TaxID=357 RepID=A0A1R3TNK5_9HYPH)

HSP 1 Score: 399 bits (1025), Expect = 4.140e-136
Identity = 190/267 (71.16%), Postives = 231/267 (86.52%), Query Frame = 1
Query:   76 AQGTIKVGNIVVTSGPLKGPGEPALSAVDIAIEEINATGGVNGRKIELIRFDTGSDPRQASVGTRKLAQDDGVVAIVGPFSSGESSVAFNDAERLKILMMPTSATAPGLTEGRKYAWRLAEDERVQFSRLLQSLKSKGIKSDTAEIVYVSDEVIANVAGTKSYPPLLEAAGIKFGTPISVQYKSFDMSAQAAQILKSNPDLVAIAALPESASKVIKELRRQGYKGRIIGSQIFADPNIVELFGPEGEGTFVVAGFWKGKTAASQRFN 876
            A  TIK+GNIV TSGPLKGPGEP + A DIA++EINA GG+NG+++EL+RF+TGSDP+QASVG RKL QDDGV+AIVGP SSGE++VAFNDA+RLK+LMMP +A+ PGLT  RKY WRL EDE  QF+R+L SLK+KG+K DTA+I+Y+S+EV++N +GTK YP + +  GIK+G P++VQYKSFDMSAQAAQI++ NPD+VAIAALP+SASKVIKELRRQGYKGRIIGSQIFADPN+VELFGPEG GT + AGFWKG +  S  FN
Sbjct:   23 AADTIKIGNIVATSGPLKGPGEPTVVAADIALQEINAAGGINGKQVELVRFETGSDPKQASVGARKLIQDDGVLAIVGPLSSGEAAVAFNDADRLKVLMMPNAASTPGLTNNRKYGWRLTEDESKQFTRMLTSLKNKGVKLDTAQIIYISEEVVSNASGTKLYPAIFDKMGIKYGPPLAVQYKSFDMSAQAAQIMQVNPDVVAIAALPDSASKVIKELRRQGYKGRIIGSQIFADPNVVELFGPEGNGTVMAAGFWKGFSERSSAFN 289          
BLAST of mRNA_P-wetherbeei_contig16830.1.1 vs. uniprot
Match: A0A549TF72_9HYPH (ABC transporter substrate-binding protein n=2 Tax=Rhizobium TaxID=379 RepID=A0A549TF72_9HYPH)

HSP 1 Score: 396 bits (1017), Expect = 4.830e-134
Identity = 198/289 (68.51%), Postives = 235/289 (81.31%), Query Frame = 1
Query:   10 MKTKVQILATALLSCVCCTTAGAQGTIKVGNIVVTSGPLKGPGEPALSAVDIAIEEINATGGVNGRKIELIRFDTGSDPRQASVGTRKLAQDDGVVAIVGPFSSGESSVAFNDAERLKILMMPTSATAPGLTEGRKYAWRLAEDERVQFSRLLQSLKSKGIKSDTAEIVYVSDEVIANVAGTKSYPPLLEAAGIKFGTPISVQYKSFDMSAQAAQILKSNPDLVAIAALPESASKVIKELRRQGYKGRIIGSQIFADPNIVELFGPEGEGTFVVAGFWKGKTAASQRFN 876
            MK   + LAT  L  +   +A A  TIK+GNIV TSG LKG  EPA+ + DIA+ EINA GG+NG+K+EL+RFDTGSDP+QASVG RKL QDDGV+AI+GPFSSGE+SVAFND ERLK+LMMP SA+ PGLT+ R YAWRL EDE  QF+R+L SLK+ G+K D A IVY+S+EV++N +GTK YP + +  GIK+  PI VQYKSFDMSAQAAQIL++NPD+VAIAALPESASKVIKELRRQGYKGRIIGSQIFADPN+VELFGPEGEG  + A FWKG +  +Q FN
Sbjct:   60 MKVGFRFLATVALPALLAGSALADNTIKIGNIVATSGTLKGVAEPAVVSADIAVAEINAAGGINGKKVELVRFDTGSDPKQASVGARKLIQDDGVLAILGPFSSGEASVAFNDGERLKVLMMPNSASTPGLTDNRNYAWRLTEDESKQFTRMLNSLKAHGVKMDKAAIVYISEEVVSNASGTKLYPMIFDKLGIKYDPPIPVQYKSFDMSAQAAQILQANPDIVAIAALPESASKVIKELRRQGYKGRIIGSQIFADPNVVELFGPEGEGVIMAASFWKGFSPRAQAFN 348          
BLAST of mRNA_P-wetherbeei_contig16830.1.1 vs. uniprot
Match: A0A4Y8RVY6_9HYPH (ABC transporter substrate-binding protein n=1 Tax=Jiella endophytica TaxID=2558362 RepID=A0A4Y8RVY6_9HYPH)

HSP 1 Score: 391 bits (1005), Expect = 5.500e-133
Identity = 191/267 (71.54%), Postives = 234/267 (87.64%), Query Frame = 1
Query:   76 AQGTIKVGNIVVTSGPLKGPGEPALSAVDIAIEEINATGGVNGRKIELIRFDTGSDPRQASVGTRKLAQDDGVVAIVGPFSSGESSVAFNDAERLKILMMPTSATAPGLTEGRKYAWRLAEDERVQFSRLLQSLKSKGIKSDTAEIVYVSDEVIANVAGTKSYPPLLEAAGIKFGTPISVQYKSFDMSAQAAQILKSNPDLVAIAALPESASKVIKELRRQGYKGRIIGSQIFADPNIVELFGPEGEGTFVVAGFWKGKTAASQRFN 876
            A+GTIK+GNIV  SGPLKGPGEP + AVDIA++EINA GG++G+KIELIR+DTGSDP+QASV  RKL QDDGV+AIVGPFSSGE+ +A NDAERLK LMMPTS++APGLTEG+KY++RL EDE+ QFSRLL ++K+KGI++ +A+IVY+SD+V++NV GTK YP LLE AGI+    I+VQ KSFDMSAQAA+IL++ PD VAIAALP+ ASKVIKELRRQG++G++IGSQIFADPN+VELFGP GEGT VVA FWKG+T  S+ FN
Sbjct:   29 AEGTIKIGNIVAASGPLKGPGEPTVVAVDIAVDEINAEGGIDGKKIELIRYDTGSDPKQASVAARKLIQDDGVLAIVGPFSSGEARIALNDAERLKTLMMPTSSSAPGLTEGKKYSYRLTEDEQKQFSRLLDTIKAKGIEAKSADIVYISDDVVSNVTGTKVYPALLEKAGIEVKDSIAVQLKSFDMSAQAAKILQNKPDFVAIAALPDQASKVIKELRRQGFEGQVIGSQIFADPNVVELFGPAGEGTLVVASFWKGRTRQSEAFN 295          
BLAST of mRNA_P-wetherbeei_contig16830.1.1 vs. uniprot
Match: UPI0004044D80 (ABC transporter substrate-binding protein n=1 Tax=Gemmobacter nectariphilus TaxID=220343 RepID=UPI0004044D80)

HSP 1 Score: 390 bits (1001), Expect = 1.590e-132
Identity = 188/267 (70.41%), Postives = 225/267 (84.27%), Query Frame = 1
Query:   76 AQGTIKVGNIVVTSGPLKGPGEPALSAVDIAIEEINATGGVNGRKIELIRFDTGSDPRQASVGTRKLAQDDGVVAIVGPFSSGESSVAFNDAERLKILMMPTSATAPGLTEGRKYAWRLAEDERVQFSRLLQSLKSKGIKSDTAEIVYVSDEVIANVAGTKSYPPLLEAAGIKFGTPISVQYKSFDMSAQAAQILKSNPDLVAIAALPESASKVIKELRRQGYKGRIIGSQIFADPNIVELFGPEGEGTFVVAGFWKGKTAASQRFN 876
            AQ + K+GNI   SGPLKGPGEPA  A+D+A+ EINA GG+NG+ IELIRFDTGSDP+QASV  R++A DD V+A++GPFSSGES+VA NDAERLK+L +PTSA+APGLT+G+KY WRL+EDE  QF RLL +LK+  IK D  +I+YVSDE I+N AGTK YP LL+ AG+K+G PI VQYKSFDMSAQ AQILK+NPD VA+AA P+SASK++KELRRQGY GR+IGSQIFADPNIVELFG  GEGTFVVAGFWKG  A +++FN
Sbjct:   20 AQDSYKIGNIAAMSGPLKGPGEPATVAIDLAVREINAAGGINGKPIELIRFDTGSDPKQASVAMRRMALDDKVIAVLGPFSSGESNVALNDAERLKVLTIPTSASAPGLTDGKKYGWRLSEDEVKQFGRLLTTLKANNIKLDYVDIIYVSDETISNTAGTKVYPALLDRAGVKYGDPIPVQYKSFDMSAQVAQILKNNPDAVAVAATPDSASKIVKELRRQGYAGRVIGSQIFADPNIVELFGAAGEGTFVVAGFWKGNNAQAEKFN 286          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16830.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3R9ZMC4_9HYPH1.980e-14978.52ABC transporter substrate-binding protein n=3 Tax=... [more]
A0A2G2CYF4_9HYPH4.240e-14575.97Peripla_BP_6 domain-containing protein n=1 Tax=Hoe... [more]
A0A7W4VQV6_9HYPH3.290e-14075.66Branched-chain amino acid transport system substra... [more]
UPI001AE99CAC6.240e-13873.78ABC transporter substrate-binding protein n=1 Tax=... [more]
UPI0013EB62808.860e-13870.24ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A1W2DMM4_9HYPH1.450e-13669.55Amino acid/amide ABC transporter substrate-binding... [more]
A0A1R3TNK5_9HYPH4.140e-13671.16ABC transporter substrate-binding protein n=2 Tax=... [more]
A0A549TF72_9HYPH4.830e-13468.51ABC transporter substrate-binding protein n=2 Tax=... [more]
A0A4Y8RVY6_9HYPH5.500e-13371.54ABC transporter substrate-binding protein n=1 Tax=... [more]
UPI0004044D801.590e-13270.41ABC transporter substrate-binding protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16830contigP-wetherbeei_contig16830:2..877 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1121271.AUCM01000009_gene2244
PFAMsPeripla_BP_6
Model size876
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K01999
KEGG TC3.A.1.4
KEGG Pathwayko02010,ko02024,map02010,map02024
KEGG ModuleM00237
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2.41e-133
EggNOG OGsCOG0683@1|root,COG0683@2|Bacteria,1RBGU@1224|Proteobacteria,2U6VH@28211|Alphaproteobacteria
DescriptionPeriplasmic binding protein
Cds size870
COG categoryE
BRITEko00000,ko00001,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186098.963714-CDS-P-wetherbeei_contig16830:1..8711683186098.963714-CDS-P-wetherbeei_contig16830:1..871Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16830 2..871 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186098.9736679-UTR-P-wetherbeei_contig16830:871..8771683186098.9736679-UTR-P-wetherbeei_contig16830:871..877Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig16830 872..877 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16830.1.1prot_P-wetherbeei_contig16830.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16830 2..871 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16830.1.1

>prot_P-wetherbeei_contig16830.1.1 ID=prot_P-wetherbeei_contig16830.1.1|Name=mRNA_P-wetherbeei_contig16830.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=290bp
MMKTKVQILATALLSCVCCTTAGAQGTIKVGNIVVTSGPLKGPGEPALSA
VDIAIEEINATGGVNGRKIELIRFDTGSDPRQASVGTRKLAQDDGVVAIV
GPFSSGESSVAFNDAERLKILMMPTSATAPGLTEGRKYAWRLAEDERVQF
SRLLQSLKSKGIKSDTAEIVYVSDEVIANVAGTKSYPPLLEAAGIKFGTP
ISVQYKSFDMSAQAAQILKSNPDLVAIAALPESASKVIKELRRQGYKGRI
IGSQIFADPNIVELFGPEGEGTFVVAGFWKGKTAASQRFN
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mRNA from alignment at P-wetherbeei_contig16830:2..877-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16830.1.1 ID=mRNA_P-wetherbeei_contig16830.1.1|Name=mRNA_P-wetherbeei_contig16830.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=876bp|location=Sequence derived from alignment at P-wetherbeei_contig16830:2..877- (Phaeothamnion wetherbeei SAG_119_79)
AGATTGATGATGAAAACGAAGGTTCAGATCCTGGCGACAGCGCTGTTGTC GTGCGTCTGTTGCACTACGGCAGGGGCGCAAGGTACGATCAAGGTTGGCA ATATCGTAGTCACCTCGGGGCCGCTCAAGGGACCCGGCGAGCCAGCGTTG TCGGCGGTCGACATCGCGATAGAGGAAATCAATGCGACCGGCGGCGTTAA CGGTCGCAAGATCGAGCTCATCCGCTTTGATACGGGCTCCGACCCCAGGC AAGCATCGGTTGGCACGCGCAAGCTCGCCCAGGACGACGGCGTCGTCGCA ATCGTTGGTCCTTTCTCATCCGGCGAGTCGTCGGTCGCTTTCAACGACGC TGAGCGCCTGAAGATCCTGATGATGCCGACGTCGGCCACGGCACCCGGCC TCACCGAGGGGCGCAAGTATGCCTGGCGTTTAGCTGAGGACGAACGAGTC CAGTTCTCGCGGCTGCTGCAATCGCTGAAGAGCAAGGGCATCAAGTCGGA TACAGCAGAGATCGTGTATGTCTCCGACGAAGTGATCGCGAACGTCGCCG GCACCAAAAGCTATCCGCCTCTGCTGGAGGCGGCCGGAATCAAATTCGGC ACACCAATTTCCGTTCAGTACAAGAGCTTCGACATGTCGGCGCAAGCGGC GCAGATCCTGAAGTCGAACCCCGATTTGGTCGCGATCGCTGCACTGCCAG AGTCGGCCTCGAAAGTTATCAAGGAGTTGCGTCGGCAGGGATACAAGGGC CGCATCATCGGCTCGCAGATCTTTGCCGATCCGAACATCGTCGAGCTTTT CGGCCCGGAAGGTGAGGGTACGTTCGTCGTTGCTGGCTTCTGGAAAGGTA AGACGGCGGCGTCGCAGCGATTCAAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16830:2..877-

>mRNA_P-wetherbeei_contig16830.1.1 ID=mRNA_P-wetherbeei_contig16830.1.1|Name=mRNA_P-wetherbeei_contig16830.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=870bp|location=Sequence derived from alignment at P-wetherbeei_contig16830:2..877- (Phaeothamnion wetherbeei SAG_119_79)
ATGATGAAAACGAAGGTTCAGATCCTGGCGACAGCGCTGTTGTCGTGCGT
CTGTTGCACTACGGCAGGGGCGCAAGGTACGATCAAGGTTGGCAATATCG
TAGTCACCTCGGGGCCGCTCAAGGGACCCGGCGAGCCAGCGTTGTCGGCG
GTCGACATCGCGATAGAGGAAATCAATGCGACCGGCGGCGTTAACGGTCG
CAAGATCGAGCTCATCCGCTTTGATACGGGCTCCGACCCCAGGCAAGCAT
CGGTTGGCACGCGCAAGCTCGCCCAGGACGACGGCGTCGTCGCAATCGTT
GGTCCTTTCTCATCCGGCGAGTCGTCGGTCGCTTTCAACGACGCTGAGCG
CCTGAAGATCCTGATGATGCCGACGTCGGCCACGGCACCCGGCCTCACCG
AGGGGCGCAAGTATGCCTGGCGTTTAGCTGAGGACGAACGAGTCCAGTTC
TCGCGGCTGCTGCAATCGCTGAAGAGCAAGGGCATCAAGTCGGATACAGC
AGAGATCGTGTATGTCTCCGACGAAGTGATCGCGAACGTCGCCGGCACCA
AAAGCTATCCGCCTCTGCTGGAGGCGGCCGGAATCAAATTCGGCACACCA
ATTTCCGTTCAGTACAAGAGCTTCGACATGTCGGCGCAAGCGGCGCAGAT
CCTGAAGTCGAACCCCGATTTGGTCGCGATCGCTGCACTGCCAGAGTCGG
CCTCGAAAGTTATCAAGGAGTTGCGTCGGCAGGGATACAAGGGCCGCATC
ATCGGCTCGCAGATCTTTGCCGATCCGAACATCGTCGAGCTTTTCGGCCC
GGAAGGTGAGGGTACGTTCGTCGTTGCTGGCTTCTGGAAAGGTAAGACGG
CGGCGTCGCAGCGATTCAAT
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