mRNA_P-wetherbeei_contig16820.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16820.1.1
Unique NamemRNA_P-wetherbeei_contig16820.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: D8LNK7_ECTSI (BTB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK7_ECTSI)

HSP 1 Score: 380 bits (977), Expect = 9.130e-122
Identity = 193/280 (68.93%), Postives = 230/280 (82.14%), Query Frame = 1
Query:    4 VRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWDSRMRADKRPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGRLHVKLDIPRTSLDDNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYAGRKNNELFIQSLRGDPWHDFQFSVLVNYRHEYRDSA-GLEIVHVDMLRGRGGEDLSGVMCYTSSARLASDLKRACLDGDHADAVLVAADNAYYLAHKAVLCCRSPLLREMLNAATAMSAGGESGKG 840
            V+L+D+ T QVVRDFKD+HEDHINISRFANHSPF+FATSSFD+T K WDSR+RAD  P+++C S  GHVM+ FSPDD FLLTSAVDNEV QY A+DGRLH+ LD+P+T LD+NFTR+YYTSSGRLILSGSSEEQ VRL+CAQTGRLIH AEMY GRK+  L++QSLRGDP HDFQFSVLVNYR    D+A  LEIV+VDML+G  GEDLS +M Y SS+RL++DL+RAC+D   AD  LVA D + +LAHKAV+ CRS +L ++L A  A +A  E GKG
Sbjct:  205 VKLFDLSTGQVVRDFKDVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSFSPDDVFLLTSAVDNEVKQYLALDGRLHMDLDVPKTGLDENFTRSYYTSSGRLILSGSSEEQTVRLYCAQTGRLIHSAEMYPGRKHGSLYVQSLRGDPHHDFQFSVLVNYR----DTAYPLEIVNVDMLQGTDGEDLSSLMAYASSSRLSADLRRACVDKQGADLFLVARDRSRFLAHKAVVACRSAVLGDLL-AKAAAAASSEEGKG 479          
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: A0A6H5K536_9PHAE (BTB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K536_9PHAE)

HSP 1 Score: 373 bits (957), Expect = 6.350e-115
Identity = 185/265 (69.81%), Postives = 221/265 (83.40%), Query Frame = 1
Query:    4 VRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWDSRMRADKRPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGRLHVKLDIPRTSLDDNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYAGRKNNELFIQSLRGDPWHDFQFSVLVNYRHEYRDSA-GLEIVHVDMLRGRGGEDLSGVMCYTSSARLASDLKRACLDGDHADAVLVAADNAYYLAHKAVLCCRSPLLREML 795
            V+L+D+ T QVVRDF+D+HEDHINISRFANHSPF+FATSSFD+T K WDSR+RAD  P+++C S  GHVM+ FSPDD FLLTSAVDNEV QY A+DGRLH+ LD+P+T LD+NFTR+YYTSSGRLILSGSSEEQ VRL+CAQTGRLIH AEMY GRK+  L++QSLRGDP HDFQFSVLVNYR    D+A  LEIV+VDML+G GGEDLS +M Y SS+RL++DL+RAC+D   AD  LVA D + + AHKAV+ CRS +L  +L
Sbjct:  191 VKLFDLGTGQVVRDFEDVHEDHINISRFANHSPFVFATSSFDKTVKAWDSRVRADNAPIYTCHSEMGHVMLSFSPDDVFLLTSAVDNEVKQYLALDGRLHMDLDVPKTGLDENFTRSYYTSSGRLILSGSSEEQTVRLYCAQTGRLIHSAEMYPGRKHGSLYVQSLRGDPHHDFQFSVLVNYR----DTAYPLEIVNVDMLQGTGGEDLSSLMAYASSSRLSADLRRACVDKQGADLFLVARDRSRFPAHKAVVACRSAVLGGLL 451          
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: A0A835ZCY9_9STRA (BTB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCY9_9STRA)

HSP 1 Score: 294 bits (752), Expect = 3.890e-87
Identity = 173/310 (55.81%), Postives = 203/310 (65.48%), Query Frame = 1
Query:    4 VRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWDSRMRADKRPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGRLHVKLDIPRTSLD--DNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYA-------------GRKNNELFIQSLRGDPWHDFQFSVLVNYRHEYRDSAGLEIVHVDMLR----GR--------------------GGEDLSGVMCYTSSARLASDLKRACLDG--DHADAVLVAADNAYYLAHKAVLCCRSPLLREMLNAATA 810
            V +YD+ET  VVR F  IH++HINISRFAN SPFLFATSSFD+T KMWD+R+RA+ RP+++C SSQGHVMVCFSPDD FLLTSAVDNEV+QY AVDGRLH+KLD+P  SL+  +NFTR+YYT+SGR I+SGSSEEQ VRLHCA TGRL   AEMY              GRK+  L++QSLRGDP  D  FSVLVNYR        LEIV +DM      GR                     G+D        +   LA+DL  A  DG  +  DA +VAAD A Y AH AVL CRSP L+E+L  A A
Sbjct:   51 VAMYDLETGAVVRTFLKIHDNHINISRFANQSPFLFATSSFDKTVKMWDARVRAEHRPIYTCTSSQGHVMVCFSPDDVFLLTSAVDNEVSQYLAVDGRLHLKLDVPSASLNAHENFTRSYYTASGRFIISGSSEEQSVRLHCANTGRLARAAEMYVETSTSTVAARAYPGRKHESLYVQSLRGDPQRDGAFSVLVNYRDPAHP---LEIVTIDMGAPCDAGRRAAAPXXXXXXXXXXXXXVHSGQD-------GACGALATDLACAWQDGGDELLDACVVAADGATYSAHVAVLACRSPALKELLQEAKA 350          
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: A0A7S1CMT7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMT7_9STRA)

HSP 1 Score: 260 bits (665), Expect = 1.260e-76
Identity = 140/272 (51.47%), Postives = 187/272 (68.75%), Query Frame = 1
Query:    1 SVRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWDSRMRADKRPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGRLHVKLDIPRTSLDDNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYAGRKNNELFIQSLRGDPWHDFQFSVLVNYRHEYRDSA-GLEIVHVDMLRGRGGEDLSGVMCYTSSARLASDLKRACLDGDHADAVLVAADNAYYL----AHKAVLCCRSPLLREMLNA 801
            SVRLYD+ T ++ R F +IH DHINI+RFA+HSP LFATSSFDRT K+WD RMR D++P ++CRS +G+V++CFSPDD +LLTSAVDNE+ QY   DGRLH+ LD+ +T   DN+TR+YY + G +I+SGSSEE+V+RLHCA TG L+H A++Y GRK+  L+IQSLRG+P  D +F+VL NYR    DSA  LEIV +  +    G DL+ +     + R    L  A  D   AD  LVA +    +    AH+++L  R  + R +L A
Sbjct:   55 SVRLYDLGTGKLARVFSEIHTDHINITRFAHHSPNLFATSSFDRTIKVWDLRMR-DRKPNYTCRSDRGNVILCFSPDDLYLLTSAVDNEIRQYTVQDGRLHLHLDVVKTGRSDNYTRSYYMNGGDVIVSGSSEEKVLRLHCAHTGELLHSADLYPGRKSPLLYIQSLRGNPHRDHEFAVLCNYR----DSAFPLEIVKISQVVDAEGNDLTALTSRPGTQRWYDQLVPAVQDESSADMSLVAREKDGTMVRIPAHRSILAARCDVFRRLLRA 321          
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: A0A835YWL6_9STRA (Quinon protein alcohol dehydrogenase-like superfamily (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWL6_9STRA)

HSP 1 Score: 241 bits (614), Expect = 2.220e-74
Identity = 120/183 (65.57%), Postives = 141/183 (77.05%), Query Frame = 1
Query:    4 VRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWDSRMRADK-----------------RPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGRLHVKLDIPRTSLD--DNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYAGRKNNELFIQ 495
            V +YDVET  V R FKDIH++HINISRFAN SPFLFATSSFD+T KMWD+R+RAD                  RP+++C S+QGHVMVCFSPDD FLLTSAVDNEVTQY  VDGR H+KLD+P T+ +  +NFTRAYYT+SGR ILSGSSEE+ VRLHC+ TGRL H  EMY GRK++ L+IQ
Sbjct:  186 VAMYDVETGAVCRAFKDIHKNHINISRFANQSPFLFATSSFDKTVKMWDARVRADHSYVCPVPPACPPPPPQTRPIYTCTSAQGHVMVCFSPDDAFLLTSAVDNEVTQYLTVDGRHHLKLDVPSTAANRAENFTRAYYTASGRFILSGSSEERAVRLHCSATGRLAHAVEMYPGRKHDSLYIQ 368          
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: A0A4D9D8W8_9STRA (BTB domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8W8_9STRA)

HSP 1 Score: 238 bits (608), Expect = 7.790e-68
Identity = 124/203 (61.08%), Postives = 154/203 (75.86%), Query Frame = 1
Query:    1 SVRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWDSRMRADKRPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGR--LHVKLDIPRTSLDDNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYAGRKNNELFIQSLRGDPWHDFQFSVLVNYRHEYRDSAGLEIVHVDML 603
            +V+LYD +T  +VR F+ IH DHINISRFANHSP LFA+SSFD++ K+WD R  A  RPL++ RS QGHVMVCFSP+D  LL S VDN++ Q  AVDGR  LH+K  +P+T L DN+TRAYYT+SG+ ILSGSSEEQ VR+HCAQTG  +   E Y GR+++ L++QSLRGDP  D +FSVLVNYR     S  LEI+ +DML
Sbjct:  168 TVQLYDTQTGAIVRRFESIHSDHINISRFANHSPHLFASSSFDKSIKLWDLRC-AGTRPLYTARSEQGHVMVCFSPEDVHLLASRVDNDIVQLEAVDGRIALHLK-GLPKTGLADNYTRAYYTASGQAILSGSSEEQDVRVHCAQTGDALASFEAYPGRRHHSLYVQSLRGDPLCDHRFSVLVNYRDA---SFPLEIISIDML 365          
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: A0A7S3YEB9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YEB9_9EUKA)

HSP 1 Score: 215 bits (548), Expect = 2.640e-63
Identity = 124/277 (44.77%), Postives = 168/277 (60.65%), Query Frame = 1
Query:    1 SVRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWDSRMRADKRPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGRLHVKLDIPRTSLDDNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYAGRKNNELFIQSLRGDPWHDFQFSVLVNYRHEYRDSAGLEIVHVDMLRGRGGEDLSGVMCYTSSARLASDLKRACLDGDHADAVLVAADNAYYLAHKAVLCCRSPLLREMLN---AATAMSAG 822
            +V ++DVET Q VR++  IHEDHINI RFAN+ P +  T SFD T K+WD+R  A +RP+    S  G+VMVCFSPDD + L SAVDNEV QY  VDG LH+K DI   +   N+TR+YY + G L++SGSS + VV +  + TG++I    MY GR++  L+IQSLRG+P +  +F VLV YR+     A  E+V VD+ R   G+ +       ++ +L  D  R   +    D  LVA D     AHKA+L  R P  R  L     +T++SAG
Sbjct:  152 NVNIFDVETGQEVREYNGIHEDHINICRFANNLPDILLTCSFDNTIKLWDNRCSA-QRPIHVSNSKGGNVMVCFSPDDMYFLASAVDNEVKQYTTVDGSLHLKYDIEPINSSINYTRSYYANDGDLVVSGSSNDDVVHICSSSTGKIIESIRMYEGRRHPNLYIQSLRGNPINANRFGVLVCYRYS---DAPYEVVDVDLNRDSKGQPVHLPYSIAAAQQLTQDFARQIDNPSFYDVELVADDGRRLRAHKAILSPRWPWFRRRLTNLKPSTSLSAG 424          
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: A0A7S2W5J7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W5J7_9STRA)

HSP 1 Score: 206 bits (523), Expect = 5.950e-62
Identity = 105/196 (53.57%), Postives = 144/196 (73.47%), Query Frame = 1
Query:   67 HINISRFANHSPFLFATSSFDRTAKMWDSRMRADKRPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGRLHVKLDIPRTSLDDNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYAGRKNNELFIQSLRGDPWHDFQFSVLVNYRHEYRDSAGLEIVHVDMLRGRGGEDLSGVMCYTSS 654
            HINI+RFANH P+LFATSSFD+TAK+WD+RMR+  RP+++  S +GHV++CFSPDDT LLTSAVDNEV Q+  ++GR H +  + +T L DNFTRAYY+ SGR +LSGSSEE  VR++ + TG L+    MY  R+   L+IQSLRGDP+ D + SVLVNYR     +  LEI+ +DM++    E+++ ++  + S
Sbjct:    1 HINIARFANHCPYLFATSSFDKTAKLWDTRMRS-VRPIYTRTSKEGHVLLCFSPDDTHLLTSAVDNEVRQFMTLNGRSHQEFRV-QTGLADNFTRAYYSCSGRYVLSGSSEEDAVRIYDSSTGTLLRSTSMYPRRRYAGLYIQSLRGDPFSDTRLSVLVNYRSS---AYPLEIITLDMMQHLDQENIAPILQASES 191          
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: A0A7S0NCM1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NCM1_9CRYP)

HSP 1 Score: 209 bits (533), Expect = 6.800e-62
Identity = 105/194 (54.12%), Postives = 134/194 (69.07%), Query Frame = 1
Query:    4 VRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWDSRMRADKRPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGRLHVKLDIPRTSLDDNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYAGRKNNELFIQSLRGDPWHDFQFSVLVNYRHEYRDSAGLEI 585
            V LYD++  + ++ FK +H  HIN+ +FAN SP LFATSSFD+  KMWD R  A+ RP+F+CRS QG+VMVCFSPDD +LL+SAVDNEV QY AVDGRL +K DI     + N+TR+YY +    I+SGS EE VVR++CA+TGR      +  G     L++QSLRGDP+H F  SVLV Y H    S  LE+
Sbjct:  187 VALYDLKVGKKIQTFKSLHSQHINVLKFANFSPSLFATSSFDKDVKMWDLREGAN-RPIFTCRSDQGNVMVCFSPDDRYLLSSAVDNEVRQYTAVDGRLTMKFDILSLGSEHNYTRSYYMNGSDYIISGSCEESVVRIYCARTGRFFRDFTIDRGSGPASLYVQSLRGDPFHPFHLSVLVAYNHPLAPSEMLEV 379          
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Match: A0A4D8Y5A5_SALSN (Uncharacterized protein n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D8Y5A5_SALSN)

HSP 1 Score: 200 bits (508), Expect = 8.380e-58
Identity = 102/210 (48.57%), Postives = 140/210 (66.67%), Query Frame = 1
Query:    1 SVRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWDSRMRADKRPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGRLHVKLDIPRTSLDDNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHWAEMYAGRKNNELFIQSLRGDPWHDFQFSVLVNYRHEYRDSAGLEIVHVDMLRGRGGEDLS 630
            +V LYD+ + + ++DF D+H++HIN+ +F+NHSP LFATSSFD+  KMWD R + ++ P ++  SS+G+VMVCFSPDD +LL SAVDNEV Q  AVDGRLH+   I  T    N+TR+YY +    ++SGS +E VVR+ CA TGR +    +      + +F+QSLRGDP+ DF  SVL  Y    R S+  EIV V++L   G  D S
Sbjct:  212 NVALYDISSGKRLQDFADMHQEHINVVKFSNHSPSLFATSSFDQNVKMWDIRQKPNQ-PCYTASSSRGNVMVCFSPDDHYLLVSAVDNEVRQLLAVDGRLHLNFGIASTGSSQNYTRSYYMNGRDYVISGSCDEHVVRVCCANTGRRLRDVSLEGKGAGSSMFVQSLRGDPFRDFSMSVLAAY---IRPSSNSEIVKVNLLES-GDSDKS 416          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16820.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNK7_ECTSI9.130e-12268.93BTB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K536_9PHAE6.350e-11569.81BTB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZCY9_9STRA3.890e-8755.81BTB domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S1CMT7_9STRA1.260e-7651.47Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A835YWL6_9STRA2.220e-7465.57Quinon protein alcohol dehydrogenase-like superfam... [more]
A0A4D9D8W8_9STRA7.790e-6861.08BTB domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S3YEB9_9EUKA2.640e-6344.77Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A7S2W5J7_9STRA5.950e-6253.57Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S0NCM1_9CRYP6.800e-6254.12Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A4D8Y5A5_SALSN8.380e-5848.57Uncharacterized protein n=1 Tax=Salvia splendens T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16820contigP-wetherbeei_contig16820:20..1451 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LNK7
Preferred nameLRRIQ1
PFAMsBTB,IQ,LRR_8
Model size858
Max annot lvl2759|Eukaryota
KEGG koko:K14963
KEGG Pathwayko04934,map04934
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.5e-122
EggNOG OGsCOG4886@1|root,KOG0531@2759|Eukaryota
Descriptionaxoneme assembly
Cds size858
COG categoryL
BRITEko00000,ko00001,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186098.810364-CDS-P-wetherbeei_contig16820:19..3701683186098.810364-CDS-P-wetherbeei_contig16820:19..370Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16820 20..370 -
1683186098.8233273-CDS-P-wetherbeei_contig16820:666..9181683186098.8233273-CDS-P-wetherbeei_contig16820:666..918Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16820 667..918 -
1683186098.8330312-CDS-P-wetherbeei_contig16820:1196..14511683186098.8330312-CDS-P-wetherbeei_contig16820:1196..1451Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16820 1197..1451 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16820.1.1prot_P-wetherbeei_contig16820.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16820 20..1451 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16820.1.1

>prot_P-wetherbeei_contig16820.1.1 ID=prot_P-wetherbeei_contig16820.1.1|Name=mRNA_P-wetherbeei_contig16820.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=286bp
SVRLYDVETTQVVRDFKDIHEDHINISRFANHSPFLFATSSFDRTAKMWD
SRMRADKRPLFSCRSSQGHVMVCFSPDDTFLLTSAVDNEVTQYFAVDGRL
HVKLDIPRTSLDDNFTRAYYTSSGRLILSGSSEEQVVRLHCAQTGRLIHW
AEMYAGRKNNELFIQSLRGDPWHDFQFSVLVNYRHEYRDSAGLEIVHVDM
LRGRGGEDLSGVMCYTSSARLASDLKRACLDGDHADAVLVAADNAYYLAH
KAVLCCRSPLLREMLNAATAMSAGGESGKGGNGAGN
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mRNA from alignment at P-wetherbeei_contig16820:20..1451-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16820.1.1 ID=mRNA_P-wetherbeei_contig16820.1.1|Name=mRNA_P-wetherbeei_contig16820.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1432bp|location=Sequence derived from alignment at P-wetherbeei_contig16820:20..1451- (Phaeothamnion wetherbeei SAG_119_79)
AGCGTCCGGCTGTACGACGTGGAGACGACGCAGGTCGTGCGCGACTTCAA GGACATCCACGAGGACCACATCAACATCAGCCGTTTCGCCAACCACTCGC CGTTCCTCTTCGCGACGTCGAGCTTCGACCGCACCGCCAAGATGTGGGAC TCGCGCATGCGGGCCGACAAGCGGCCGCTGTTCTCGTGCCGATCGTCGCA GGGCCACGTCATGGTCTGCTTCAGCCCCGACGACACCTTCCTGCTGACAT CCGCAGTGAGTGGAGCGTAGGGACGGCCATTCAGAGAAGAGACATGCAAT TTCTTCTGTTTTCTTCTTGTTTCGGCGGTTGTTTGTTCTTCTTCTTCTTT TGATGGCTGTTTCAGACTACTTAGAGCAGCAGTCAGAGGCGTCACAATGG CCGCCGCTTACACTTTCCTCAGCGGGTGCCTTACGCATCTTCTTCTTGCG GGGCCACAAGCCTCCTGTCGTAAACTCGAGTCATTGTTTCTCTCCCTTCT GCGTTTCCCCTTTCTCTCTCTCCCTTGCAAAAGGTCGACAACGAGGTGAC GCAGTACTTCGCGGTGGACGGCCGGCTGCACGTCAAGCTGGACATACCGC GGACGTCGCTGGACGACAACTTCACGCGTGCCTACTACACGTCGAGCGGC CGGCTCATCCTGTCGGGCTCCAGCGAGGAGCAGGTGGTCCGTCTGCACTG TGCGCAGACGGGGCGGCTGATCCACTGGGCGGAGATGTACGCGGGGCGGA AAAACAACGAGCTCTTCATCCAGTCGCTGCGCGGGGTGAGTATAGTAAAA GAGTGTTTTCTGCCCTTGTGGCCATAATGTCCGTTCCTCAGGTGACGCGC GATTTCTTCCTGACCTGAATCTGTCTTGTCAACGCTGTTGGACCGGCCCT TCTACCTCACTGGTGTCGTTCGCCGCAATTTCCACCTCAGTCATTCATGC CAGAGCCGTTGGTAGGACAAGGTTCAGATTTCCACTTTTCTTGCGAGTTT GGCGGCCAAGCTCTGCAAACCTGATGGAAGATTCTCCTCTCATTTGCATC CGGCTGCTGCCTGCCCGATTACATAAAACAGGACCCGTGGCACGACTTCC AGTTCTCGGTGTTGGTCAACTACCGCCACGAGTATCGCGACAGCGCGGGC CTCGAGATCGTCCATGTCGACATGCTGCGCGGCCGCGGCGGCGAGGACCT CAGCGGCGTCATGTGCTACACATCGTCGGCGCGGCTGGCGTCGGACCTGA AACGAGCCTGCCTGGACGGCGACCATGCTGACGCCGTCCTGGTGGCTGCT GATAACGCCTACTACCTGGCGCACAAGGCGGTGCTATGCTGCCGCAGCCC GCTTCTGCGGGAAATGCTCAATGCCGCCACTGCAATGTCGGCCGGCGGCG AGAGCGGGAAGGGCGGTAACGGCGCAGGCAAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16820:20..1451-

>mRNA_P-wetherbeei_contig16820.1.1 ID=mRNA_P-wetherbeei_contig16820.1.1|Name=mRNA_P-wetherbeei_contig16820.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=858bp|location=Sequence derived from alignment at P-wetherbeei_contig16820:20..1451- (Phaeothamnion wetherbeei SAG_119_79)
AGCGTCCGGCTGTACGACGTGGAGACGACGCAGGTCGTGCGCGACTTCAA
GGACATCCACGAGGACCACATCAACATCAGCCGTTTCGCCAACCACTCGC
CGTTCCTCTTCGCGACGTCGAGCTTCGACCGCACCGCCAAGATGTGGGAC
TCGCGCATGCGGGCCGACAAGCGGCCGCTGTTCTCGTGCCGATCGTCGCA
GGGCCACGTCATGGTCTGCTTCAGCCCCGACGACACCTTCCTGCTGACAT
CCGCAGTCGACAACGAGGTGACGCAGTACTTCGCGGTGGACGGCCGGCTG
CACGTCAAGCTGGACATACCGCGGACGTCGCTGGACGACAACTTCACGCG
TGCCTACTACACGTCGAGCGGCCGGCTCATCCTGTCGGGCTCCAGCGAGG
AGCAGGTGGTCCGTCTGCACTGTGCGCAGACGGGGCGGCTGATCCACTGG
GCGGAGATGTACGCGGGGCGGAAAAACAACGAGCTCTTCATCCAGTCGCT
GCGCGGGGACCCGTGGCACGACTTCCAGTTCTCGGTGTTGGTCAACTACC
GCCACGAGTATCGCGACAGCGCGGGCCTCGAGATCGTCCATGTCGACATG
CTGCGCGGCCGCGGCGGCGAGGACCTCAGCGGCGTCATGTGCTACACATC
GTCGGCGCGGCTGGCGTCGGACCTGAAACGAGCCTGCCTGGACGGCGACC
ATGCTGACGCCGTCCTGGTGGCTGCTGATAACGCCTACTACCTGGCGCAC
AAGGCGGTGCTATGCTGCCGCAGCCCGCTTCTGCGGGAAATGCTCAATGC
CGCCACTGCAATGTCGGCCGGCGGCGAGAGCGGGAAGGGCGGTAACGGCG
CAGGCAAC
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