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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 3732 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 1773 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186098.503017-UTR-P-wetherbeei_contig1681:1753..2617 | 1683186098.503017-UTR-P-wetherbeei_contig1681:1753..2617 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig1681 1754..2617 - |
| 1683186098.5423694-UTR-P-wetherbeei_contig1681:4956..6051 | 1683186098.5423694-UTR-P-wetherbeei_contig1681:4956..6051 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig1681 4957..6051 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683186098.5134208-CDS-P-wetherbeei_contig1681:2617..2905 | 1683186098.5134208-CDS-P-wetherbeei_contig1681:2617..2905 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1681 2618..2905 - |
| 1683186098.5228662-CDS-P-wetherbeei_contig1681:3196..3298 | 1683186098.5228662-CDS-P-wetherbeei_contig1681:3196..3298 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1681 3197..3298 - |
| 1683186098.5326407-CDS-P-wetherbeei_contig1681:3573..4956 | 1683186098.5326407-CDS-P-wetherbeei_contig1681:3573..4956 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig1681 3574..4956 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1681.1.2 >prot_P-wetherbeei_contig1681.1.2 ID=prot_P-wetherbeei_contig1681.1.2|Name=mRNA_P-wetherbeei_contig1681.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=591bp
MRRYQPTGGELSPSRRPSRPASESPLTGDAGEIGFVAGSRSISDSGSEGD
YGSQAGVLPLPGAQPPRRGLISSLPATGGSGRRLSGGSQGSMTGSETLRL
LAADRPAMDRLPSRSIARGRPTDLVIHTGTAVGAAVAAAEEKEIPAEGKD
RYMLPAGHPLAQALSLIPMAVGWCLFLFLVGGVAAALRHAGVPAAHLPYA
VLLFPVWLGDAAALFFLMLLSLHTISWRFRQGQGLKKWQVSGPGSFCGSN
DAIYGTTGPGGGVGGSEVPKDDPPMSRWLPRGLFAEVVLDSALMPFVWRM
HASLTVAVAVLAIVFAWQVLLCLRLETGSPGALATSSPLVLIEAGGLAAA
VLLNVGWQTVGFWILVLALTLSVGLRQDDIPPFAGAPWFTVLTPLWGLNL
LFLLSALYITANVLVRRYFCTTRQNFCLACYLLGLVLAWLGELMLSFPPV
AEITPRAKIFRVHLPLIFLMAGATMACVAVYLSVVGGINRFIKEQNFPGV
TAVLSVTRWGWERSGGGYTTWPLLGDIAKAGGRGGLTALVVEARGGGRSY
GRSINSSTSSPERSGGVGGVERGGGGFQRTDSGSYDNPDW* back to topmRNA from alignment at P-wetherbeei_contig1681:1754..6051- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig1681.1.2 ID=mRNA_P-wetherbeei_contig1681.1.2|Name=mRNA_P-wetherbeei_contig1681.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4298bp|location=Sequence derived from alignment at P-wetherbeei_contig1681:1754..6051- (Phaeothamnion wetherbeei SAG_119_79)
ATGACGATGGCGGCAGCGGTAGCGGCGAGGTAGAGCAGCGCAATTGGCTG
AGATTCGGTCATTCCCTGTGCAGGACGTCGATCGCGGGGCAAGCCATGCT
GGCCGCCAAACCAGAGCGCGAGAGAGCGCGCGCTGGGCAGCGTTTAGCTC
TTCTCATTATCAGAAACATGGCGCTGTCTGTGGACAACGAAAGGCGCGAG
GAAGGGGAATGGACGGTTGTGGTATTGGCATGGCGACTTGTCGGTGCCGC
TAGAGAGAGTACCAAACCGGAGCAGGCTCGCAGAACATATATGCGTAGGC
ACCTGTACGTCGATGGCAATTGCGCCTTCCCTGGACTCATCTAGCCCATG
GAGGCGGCACCGGGATGCCGCGTCCTTGCAACAGAAAGGTACCAGAACGT
TGGAAGTACTCGCCGGTCTTTGAAGCAGGCCGCTGGCGTCGGATAGCGTT
TGAGGGACGCCATCCGGATGTTTGGGCTTTGTGCGGATGCATCATGGTTC
CACAGTGCGGCAGGTGCTTGCGCATTCTGGGGAGCTAGAGAAAGGTGAGA
TGGAAGATCCGCAAGCTATTTCTTGACATCTGCCGTGTGGTAGCGCCGGA
ACCCTTCCAACTTTCTCCAATTGCAGTTTCCATGATCTTTTCCATGGTTT
CGATTTTGGGTTCAGGACTAGCGACGGTTCCGGCCTATTACCTCTTCGCA
CAATCTCTAGTCAATGCCATGTCGCCGGTGGACAGAATGCCGGAGACCCT
TTTCTAGTGCTTTCCGCGTTCAAAGTTGGAGGAGAGACGGGCCCCCCGCC
TCTCCTTGTATCTGAGGGCAACTCTCTCTAGGTTGACACGTGGTCGTCGG
GACAGCAGCAAGCTAACGAAAATTGGACCTTCCTGGTGCGGAAGGCCCCA
AAACGACCACTGAGCCCTCTCGAGTCCCTGCCAGCTGGCTCTGCCGTTCT
CTGTTTAACCATCTAGCGAGCCCTTTTTCCGTACCGGCTACTGCCGTGTG
ATGCGTTTTCTTTGCAGCAGGTCACCGCCTCTTTGTTTAACACACTTTGC
TCTGCAGGCTCCTTTCTCGGCACTTTAAGCCGTCAGCAGAAAATCATGCG
GAGATACCAGCCGACAGGAGGGGAACTTTCGCCGTCGCGGCGGCCATCGC
GGCCAGCATCCGAATCGCCGCTGACGGGAGACGCCGGCGAGATCGGCTTC
GTCGCCGGCAGCCGCAGCATCAGCGACAGCGGCAGCGAAGGCGACTACGG
TAGCCAGGCGGGCGTCCTGCCGCTGCCAGGGGCGCAGCCGCCCCGCCGAG
GGCTCATATCCTCGCTTCCGGCGACGGGGGGCAGCGGCCGCCGTCTGAGC
GGGGGCTCGCAGGGGTCCATGACGGGGTCAGAGACGCTGAGGCTGCTCGC
GGCAGACCGCCCTGCTATGGACCGCCTTCCGTCGCGTTCCATCGCGAGGG
GTCGCCCCACGGATCTCGTCATCCACACTGGAACGGCTGTCGGCGCCGCC
GTTGCCGCTGCGGAAGAGAAGGAGATCCCGGCGGAAGGGAAGGATCGGTA
CATGCTGCCGGCGGGGCACCCGCTCGCTCAGGCGTTGTCCCTTATCCCCA
TGGCAGTGGGATGGTGCCTGTTTCTCTTTCTGGTTGGCGGCGTCGCCGCC
GCACTCCGCCACGCTGGCGTTCCTGCCGCCCATCTGCCCTACGCCGTTCT
GCTGTTCCCGGTCTGGCTCGGCGACGCTGCGGCGCTCTTCTTCCTGATGC
TGCTCAGCCTGCACACAATCTCGTGGCGATTCCGGCAGGGGCAGGGGCTG
AAAAAGTGGCAAGTTTCCGGACCCGGATCCTTCTGCGGCAGCAACGATGC
GATTTACGGCACCACGGGCCCCGGCGGCGGCGTCGGCGGGTCGGAAGTGC
CCAAGGACGATCCGCCGATGTCACGCTGGCTGCCGCGCGGCCTCTTTGCG
GAAGTGGTGTTGGATTCGGCGCTGATGCCGTTCGTCTGGCGGATGCATGC
ATCTCTGACGGTGGCCGTTGCCGTTTTGGCGATCGTTTTCGCCTGGCAGG
TGCTGCTGTGCCTCCGCCTGGAGACCGGATCGCCCGGCGCGCTGGCGACG
TCATCCCCGCTAGTTCTGATCGAGGCCGGCGGGCTCGCGGCGGCTGTCTT
GCTGAACGTCGGCTGGCAGACGGTTGGCTTCTGGATCCTGGTGCTGGCGC
TGACGCTGTCCGTCGGGCTCCGGCAGGACGACATCCCGCCTTTCGCCGGC
GCTCCGTGGTTCACTGTCCTGACGCCGCTCTGGGGCCTCAATCTGCTCTT
CCTGCTGTCGGCACTCTACATCACCGCCAACGTGCTGGTGCGGCGCTACT
TCTGCACAACGCGGCAGAACTTTTGCCTTGCCTGCTACCTGCTGGGGCTG
GTGCTGGCGTGGCTTGGGGAGCTCATGCTGAGCTTCCCACCTGTCGCCGA
AATCACACCGCGAGCCAAAATATTCAGGGTGAGTACAGAAATATTTCGAG
GAAGGATACGGAAGGGGATGAAGGAACGGAGGCTTGGAAAGGAACAAAGG
AAGAGACACTCAGTGCACTTGGTATTAGGTGTATATCTTTTTGTGGTGGA
ATGGGTGCTGTCGGCGAAAACCAGCACCGCTGCACCCGGCCTCGGCGTCA
CCATCGCCGCCGCCATTCTGTTTTATGAATGCTTGCAAGTTGGTGCTTTC
GCGGCTGATCAAGCTCTTTCGTCGGTTCTCCCTCCGCGCTGCCATACCTG
CAGGTGCACCTGCCCCTGATCTTTTTGATGGCGGGAGCAACCATGGCGTG
CGTGGCGGTGTACCTCTCGGTTGTCGGCGGCATCAACCGGTTCATCAAGG
AACAGGTCAGTCAGTCGGCAGGGATGATGACGGGAACAGGGGAATTGGGA
GTGGATCGGAGCCTTTAATGAAGTTGAAGTATGCAGATTTGTTTGGAAGG
ATTTGCTTACAACACGTATTCAACATGTTTCTAACGCCAAGGGTAAGGTT
GCGGTGAGGTTGCGGTGGAAAACAGATCCATCCCTTTCCTGAGGACTCGT
CCACTGAAATGTTCCAATCTCTCCGTGTTTATGGTGTCACTCGTTCCTGC
ACTTTCGGTGTCCGTGCCAAAACGCCCTTGCCCGTGGCGGCGGCAGAACT
TTCCCGGAGTCACCGCCGTCCTGTCGGTGACCCGGTGGGGCTGGGAGCGC
TCCGGCGGCGGGTACACGACGTGGCCGCTGCTTGGCGACATCGCCAAGGC
GGGCGGCCGCGGCGGACTGACCGCGCTGGTGGTGGAGGCGCGCGGTGGCG
GCCGCTCATACGGCCGCAGTATCAACTCGTCCACATCAAGCCCCGAGCGC
AGCGGCGGCGTCGGCGGTGTGGAGCGCGGCGGCGGTGGCTTTCAGCGCAC
CGACTCGGGATCTTACGACAACCCGGACTGGTGATGGATGGAAAAGCAGG
ACCTGGAGGACGGAGGTTAGCGGCGGCGGTGGCGGAGGCGGCGGCGTCAG
CAGCGGCGGTAGAAGCGGCGATGGCGGCGGCGGTAGCGACTGCGGCAGCG
ACGGCGGCGACGGTGTCGGCGGCGATGACGGCGGCGAGGGCGGCGGCGGC
GGCAGGTGCAGGTGGTGGCAATGTGGGGAATGTGCCGGCTGCAGCAGGCG
TGGATGGCAGGTGCGGGCGACTGGCACCGGCGGGGCCTGCGTCAGCGGGA
GGCGACCGTTGCAACGCGGGCAGCAAGCGGCGAGAGCAGCGGCGTCTTCG
GCGGGGAGTGGACTTGGGATGCGGCGGGCTGGTGGTGTCCATGTGCTTGT
TCTGGAGTGGCTCCGACGGCACTTAGGGCCGTGTTGACTGAAGCGGCGCG
TGCGGGCACTAAACTTCCGCAGTTGCGCGGCGGCGACGCAGTGGAAGACG
CTTAAAACTTGGTTGGCGGCATTTTGCGCTCCAGGACGACGGCCGTGGGG
TGCGACCGGAATTGGCATACGGCGACAGTGGAAGTGCGCTTGGCAGTTTG
CCTAAGTGGCGGACAGACGCTCCGCTCAGGCTGTGCTGTCGCTAGTGCAA
AGGCGGGAATGGGAAGGCGGTAACTACTCCTCCGGAAATCTTCACGAGGG
CAGCCTACCAAAATGGCGGCCGAACCTGGCTCCGCTGAAACGTGTTGTAG
TTGTGCAAGAGGTATAGGGTGAGGACTCCGCGGCCGCATACGAGCGAGAA
CCGCATAGTAGCTGGTTGGATGGGTACGATTGAAGGACAGTAGCAGGGAA
GAGGGGGCTGGCAGCGGGCGGGGAGGGAGGCACCACAGCGATACGGCA back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig1681:1754..6051- >mRNA_P-wetherbeei_contig1681.1.2 ID=mRNA_P-wetherbeei_contig1681.1.2|Name=mRNA_P-wetherbeei_contig1681.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1773bp|location=Sequence derived from alignment at P-wetherbeei_contig1681:1754..6051- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGAGATACCAGCCGACAGGAGGGGAACTTTCGCCGTCGCGGCGGCC
ATCGCGGCCAGCATCCGAATCGCCGCTGACGGGAGACGCCGGCGAGATCG
GCTTCGTCGCCGGCAGCCGCAGCATCAGCGACAGCGGCAGCGAAGGCGAC
TACGGTAGCCAGGCGGGCGTCCTGCCGCTGCCAGGGGCGCAGCCGCCCCG
CCGAGGGCTCATATCCTCGCTTCCGGCGACGGGGGGCAGCGGCCGCCGTC
TGAGCGGGGGCTCGCAGGGGTCCATGACGGGGTCAGAGACGCTGAGGCTG
CTCGCGGCAGACCGCCCTGCTATGGACCGCCTTCCGTCGCGTTCCATCGC
GAGGGGTCGCCCCACGGATCTCGTCATCCACACTGGAACGGCTGTCGGCG
CCGCCGTTGCCGCTGCGGAAGAGAAGGAGATCCCGGCGGAAGGGAAGGAT
CGGTACATGCTGCCGGCGGGGCACCCGCTCGCTCAGGCGTTGTCCCTTAT
CCCCATGGCAGTGGGATGGTGCCTGTTTCTCTTTCTGGTTGGCGGCGTCG
CCGCCGCACTCCGCCACGCTGGCGTTCCTGCCGCCCATCTGCCCTACGCC
GTTCTGCTGTTCCCGGTCTGGCTCGGCGACGCTGCGGCGCTCTTCTTCCT
GATGCTGCTCAGCCTGCACACAATCTCGTGGCGATTCCGGCAGGGGCAGG
GGCTGAAAAAGTGGCAAGTTTCCGGACCCGGATCCTTCTGCGGCAGCAAC
GATGCGATTTACGGCACCACGGGCCCCGGCGGCGGCGTCGGCGGGTCGGA
AGTGCCCAAGGACGATCCGCCGATGTCACGCTGGCTGCCGCGCGGCCTCT
TTGCGGAAGTGGTGTTGGATTCGGCGCTGATGCCGTTCGTCTGGCGGATG
CATGCATCTCTGACGGTGGCCGTTGCCGTTTTGGCGATCGTTTTCGCCTG
GCAGGTGCTGCTGTGCCTCCGCCTGGAGACCGGATCGCCCGGCGCGCTGG
CGACGTCATCCCCGCTAGTTCTGATCGAGGCCGGCGGGCTCGCGGCGGCT
GTCTTGCTGAACGTCGGCTGGCAGACGGTTGGCTTCTGGATCCTGGTGCT
GGCGCTGACGCTGTCCGTCGGGCTCCGGCAGGACGACATCCCGCCTTTCG
CCGGCGCTCCGTGGTTCACTGTCCTGACGCCGCTCTGGGGCCTCAATCTG
CTCTTCCTGCTGTCGGCACTCTACATCACCGCCAACGTGCTGGTGCGGCG
CTACTTCTGCACAACGCGGCAGAACTTTTGCCTTGCCTGCTACCTGCTGG
GGCTGGTGCTGGCGTGGCTTGGGGAGCTCATGCTGAGCTTCCCACCTGTC
GCCGAAATCACACCGCGAGCCAAAATATTCAGGGTGCACCTGCCCCTGAT
CTTTTTGATGGCGGGAGCAACCATGGCGTGCGTGGCGGTGTACCTCTCGG
TTGTCGGCGGCATCAACCGGTTCATCAAGGAACAGAACTTTCCCGGAGTC
ACCGCCGTCCTGTCGGTGACCCGGTGGGGCTGGGAGCGCTCCGGCGGCGG
GTACACGACGTGGCCGCTGCTTGGCGACATCGCCAAGGCGGGCGGCCGCG
GCGGACTGACCGCGCTGGTGGTGGAGGCGCGCGGTGGCGGCCGCTCATAC
GGCCGCAGTATCAACTCGTCCACATCAAGCCCCGAGCGCAGCGGCGGCGT
CGGCGGTGTGGAGCGCGGCGGCGGTGGCTTTCAGCGCACCGACTCGGGAT
CTTACGACAACCCGGACTGGTGA back to top
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