prot_P-wetherbeei_contig16801.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16801.1.1
Unique Nameprot_P-wetherbeei_contig16801.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length243
Homology
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BLAST of mRNA_P-wetherbeei_contig16801.1.1 vs. uniprot
Match: A0A835YWB7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWB7_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 3.130e-7
Identity = 31/61 (50.82%), Postives = 38/61 (62.30%), Query Frame = 0 
Query:  184 TLCPLGCGDELRVRD--VKAHEAKECEMRVISCPTGGCAAMFQARELPAHLAMECAAARRR 242
            T CP GCG ++  R   ++ H   EC  RV++CP  GC A+ QAR LP H A ECAAA RR
Sbjct:  171 TQCPQGCGCDVPARGPALRRHLGAECASRVVTCPELGCGALVQARSLPLHAAAECAAAARR 231
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16801.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YWB7_9STRA3.130e-750.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 181..239
e-value: 9.4E-10
score: 40.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..155
NoneNo IPR availableSUPERFAMILY49599TRAF domain-likecoord: 187..238
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 201..240
score: 8.637538

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16801contigP-wetherbeei_contig16801:301..1029 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16801.1.1mRNA_P-wetherbeei_contig16801.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16801 301..1029 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16801.1.1 ID=prot_P-wetherbeei_contig16801.1.1|Name=mRNA_P-wetherbeei_contig16801.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=243bp
FPLRSDGTRVLDQRQRPRTFVEESDDLSRSGKISLWPYNLRREAKDTTTI
GAAKHQQELLRPQGPVYLPAKIRDISLSQHDASVGLSDDGQELGDSIAKL
QCFTRRDSPLRQNVAVTATTASPQQREDRPLAEAKEARQSPSRSPSHSHA
WETKEEMLARVAQSKAARKSSNSTATLLVQGDRTLCPLGCGDELRVRDVK
AHEAKECEMRVISCPTGGCAAMFQARELPAHLAMECAAARRRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001293Znf_TRAF