mRNA_P-wetherbeei_contig16798.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16798.1.1 vs. uniprot
Match: UPI001E38B012 (hypothetical protein n=1 Tax=Leptospira sp. severe_002 TaxID=2838237 RepID=UPI001E38B012) HSP 1 Score: 170 bits (431), Expect = 1.210e-52 Identity = 94/120 (78.33%), Postives = 105/120 (87.50%), Query Frame = 1
Query: 10 ITTDD--EDLDPRSEIALLEQRIEQLSDKLEGCRKFILAARIAMGVGGALLIALLFGAIRFDPLPMSAGIVGLIGGFVVSGSNRSTAQEAEAELAASEARRAELIGSIGLRVVSEQRTLH 363
+T DD EDLDP EI LLEQRIEQLSD+LEGCRKFILAARIAM +GGA+L+AL+ G +RFDPL MSA +VGLIGGFVVSGSNRSTAQEAEAE+AASEARR ELI +GLRVVSE+ TLH
Sbjct: 1 MTDDDREEDLDPHREIGLLEQRIEQLSDRLEGCRKFILAARIAMALGGAILVALILGLVRFDPLAMSAAVVGLIGGFVVSGSNRSTAQEAEAEIAASEARRTELISGMGLRVVSERPTLH 120
BLAST of mRNA_P-wetherbeei_contig16798.1.1 vs. uniprot
Match: A0A127ERK9_9HYPH (Uncharacterized protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127ERK9_9HYPH) HSP 1 Score: 103 bits (256), Expect = 4.780e-26 Identity = 64/121 (52.89%), Postives = 81/121 (66.94%), Query Frame = 1
Query: 1 MDAITTDDEDLDPRSEIALLEQRIEQLSDKLEGCRKFILAARIAMGVGGALLIALLFGAIRFDPLPMSAGIVGLIGGFVVSGSNRSTAQEAEAELAASEARRAELIGSIGLRVVSEQRTLH 363
MD DD + P SEIA LEQ IE+L+ KLE CRK+ AA AMG+G LL A +FG I DP+ + A L+GG V++GSNRSTA+E +A+LA +E R LIG I LRVV+E+ LH
Sbjct: 1 MDQFAPDDSE--PHSEIARLEQLIEELTLKLETCRKYSGAALAAMGLGAVLLAAGIFGVIALDPVTLLAAAAALMGGIVLAGSNRSTAREIQAQLAEAEEERRGLIGRIQLRVVTERPVLH 119
BLAST of mRNA_P-wetherbeei_contig16798.1.1 vs. uniprot
Match: A0A537NIE2_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NIE2_9PROT) HSP 1 Score: 87.8 bits (216), Expect = 4.730e-20 Identity = 49/105 (46.67%), Postives = 71/105 (67.62%), Query Frame = 1
Query: 34 DPRSEIALLEQRIEQLSDKLEGCRKFILAARIAMGVGGALLIALLFGAIRFDPLPMSAGIVGLIGGFVVSGSNRSTAQEAEAELAASEARRAELIGSIGLRVVSE 348
D +IA LE IE+L++ ++ CRK IL +++AM +GG L++A L AI FDP+ ++ I +IGG VV GSN ST ++ EA ++EA RAELI I LRV+ +
Sbjct: 5 DLHEQIARLEVHIEELAEAIDRCRKIILVSKLAMAIGGILILATLVRAIGFDPVAVTVAIASMIGGTVVFGSNTSTRKQMEAAKQSAEAARAELISQIDLRVIGD 109
BLAST of mRNA_P-wetherbeei_contig16798.1.1 vs. uniprot
Match: A0A150U773_9BRAD (Uncharacterized protein n=82 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A150U773_9BRAD) HSP 1 Score: 84.0 bits (206), Expect = 1.570e-18 Identity = 49/105 (46.67%), Postives = 70/105 (66.67%), Query Frame = 1
Query: 34 DPRSEIALLEQRIEQLSDKLEGCRKFILAARIAMGVGGALLIALLFGAIRFDPLPMSAGIVGLIGGFVVSGSNRSTAQEAEAELAASEARRAELIGSIGLRVVSE 348
DP EI+ +E RIE+L++ E CRK+ILA++IA+G G ALL+ + G F I ++GG V GSN ST ++ + ++A+EARRA LIGSI LRVV++
Sbjct: 5 DPTDEISDIEDRIERLAEVAERCRKYILASKIAIGGGAALLLVTILGVFGFGQTAALGSIALVLGGIVSLGSNVSTLRQTDEAISAAEARRAALIGSIDLRVVAD 109
BLAST of mRNA_P-wetherbeei_contig16798.1.1 vs. uniprot
Match: A0A1Y6KEQ0_9BRAD (Uncharacterized protein n=2 Tax=Bradyrhizobium sp. ORS 285 TaxID=115808 RepID=A0A1Y6KEQ0_9BRAD) HSP 1 Score: 83.6 bits (205), Expect = 2.170e-18 Identity = 52/113 (46.02%), Postives = 72/113 (63.72%), Query Frame = 1
Query: 22 DEDLDPRSEIALLEQRIEQLSDKLEGCRKFILAARIAMGVGGALLIALLFGAIRFDPLPMSAGIVGLIGGFVVSGSNRSTAQEAEAELAASEARRAELIGSIGLRVVSEQRTL 360
DED DP +IAL+E RIEQL+D+ E CRK ILA++I + G ALL+ + G + + I ++GG V GSN ST ++ A +AA+E R+ELIG I LR+V E R +
Sbjct: 3 DED-DPGGQIALIETRIEQLADRAERCRKIILASKIVISGGAALLVGAVLGLFGSNATGLLGAIAAVLGGIVSLGSNVSTLRQTLAAIAAAETLRSELIGRIDLRLVGEGRAV 114
BLAST of mRNA_P-wetherbeei_contig16798.1.1 vs. uniprot
Match: UPI001BA48C80 (hypothetical protein n=1 Tax=Bradyrhizobium liaoningense TaxID=43992 RepID=UPI001BA48C80) HSP 1 Score: 82.8 bits (203), Expect = 4.470e-18 Identity = 49/101 (48.51%), Postives = 69/101 (68.32%), Query Frame = 1
Query: 46 EIALLEQRIEQLSDKLEGCRKFILAARIAMGVGGALLIALLFGAIRFDPLPMSAGIVGLIGGFVVSGSNRSTAQEAEAELAASEARRAELIGSIGLRVVSE 348
EI+ +E RIE L++ E CRKFILA+++A+G GGALL+ ++FG + I ++GG V GSN ST Q+ EA + A+EARRA+LIG I LR+V +
Sbjct: 9 EISDIEARIEALAEIAERCRKFILASKVAIGGGGALLLLMVFGLFGAGQVAALGSIAMVLGGIVSLGSNVSTLQQTEAAIDAAEARRADLIGRIDLRLVDD 109
BLAST of mRNA_P-wetherbeei_contig16798.1.1 vs. uniprot
Match: A0A0R3BZM7_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobium yuanmingense TaxID=108015 RepID=A0A0R3BZM7_9BRAD) HSP 1 Score: 82.4 bits (202), Expect = 6.320e-18 Identity = 48/105 (45.71%), Postives = 71/105 (67.62%), Query Frame = 1
Query: 34 DPRSEIALLEQRIEQLSDKLEGCRKFILAARIAMGVGGALLIALLFGAIRFDPLPMSAGIVGLIGGFVVSGSNRSTAQEAEAELAASEARRAELIGSIGLRVVSE 348
DP EI+ +E+RIE+L++ E CRK+ILA++IA+ G ALL+ + G F + I ++GG V GSN ST ++ + ++A+EARRA LIGSI LRVV++
Sbjct: 5 DPVEEISDIEERIERLTEIAERCRKYILASKIAISGGAALLLVTILGVFGFGQIAALGSIALVLGGIVSLGSNISTLRQTDEAISAAEARRAALIGSIDLRVVAD 109
BLAST of mRNA_P-wetherbeei_contig16798.1.1 vs. uniprot
Match: UPI001BAD1B2A (hypothetical protein n=1 Tax=Bradyrhizobium manausense TaxID=989370 RepID=UPI001BAD1B2A) HSP 1 Score: 81.3 bits (199), Expect = 2.100e-17 Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = 1
Query: 19 DDEDLDPRSEIALLEQRIEQLSDKLEGCRKFILAARIAMGVGGALLIALLFGAIRFDPLPMSAGIVGLIGGFVVSGSNRSTAQEAEAELAASEARRAELIGSIGLRVVSE 348
D+ + DP I+ LE RIE LS+ E CRKFILA++IA+G G ALL+ ++ G + I ++GG V GSN ST Q+ +A + A+EARRA+LIG I LRVV +
Sbjct: 6 DESEDDPADAISDLEARIEVLSEIAERCRKFILASKIAIGGGVALLLLMVLGLFGAGQVAALGSIALVLGGIVSLGSNVSTLQQTDAAIDAAEARRADLIGRIDLRVVDD 115
BLAST of mRNA_P-wetherbeei_contig16798.1.1 vs. uniprot
Match: A0A4Q0RD25_9BRAD (Uncharacterized protein n=3 Tax=Bradyrhizobium TaxID=374 RepID=A0A4Q0RD25_9BRAD) HSP 1 Score: 80.9 bits (198), Expect = 2.540e-17 Identity = 49/107 (45.79%), Postives = 69/107 (64.49%), Query Frame = 1
Query: 28 DLDPRSEIALLEQRIEQLSDKLEGCRKFILAARIAMGVGGALLIALLFGAIRFDPLPMSAGIVGLIGGFVVSGSNRSTAQEAEAELAASEARRAELIGSIGLRVVSE 348
D DP EI+ +E RIE+L++ E CRK ILA++IA+G G ALL+ + G F I ++GG V GSN ST ++ + +A +EARR+ LIGSI LRVV++
Sbjct: 3 DNDPTDEISDIEDRIERLAEIAERCRKIILASKIAIGGGAALLLVTILGLFGFGQTAALGAIALVLGGIVSLGSNISTLRQTDDAIAGAEARRSALIGSIDLRVVAD 109
BLAST of mRNA_P-wetherbeei_contig16798.1.1 vs. uniprot
Match: A0A0X8CJX5_9BRAD (Uncharacterized protein n=5 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=A0A0X8CJX5_9BRAD) HSP 1 Score: 80.1 bits (196), Expect = 5.080e-17 Identity = 48/105 (45.71%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 34 DPRSEIALLEQRIEQLSDKLEGCRKFILAARIAMGVGGALLIALLFGAIRFDPLPMSAGIVGLIGGFVVSGSNRSTAQEAEAELAASEARRAELIGSIGLRVVSE 348
DP EI+ +E RIE L++ E CRK+ILA++IA+G G ALL+ + G + I ++GG V GSN ST ++ E + A+EARR+ LIGSI LRVV++
Sbjct: 5 DPTDEISDIEDRIEALAEIAERCRKYILASKIAIGGGAALLVVTILGLLGTGQTAALGSIALVLGGIVSLGSNVSTLRQTEEAIGAAEARRSALIGSIDLRVVAD 109 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16798.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16798.1.1 >prot_P-wetherbeei_contig16798.1.1 ID=prot_P-wetherbeei_contig16798.1.1|Name=mRNA_P-wetherbeei_contig16798.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=122bp MDAITTDDEDLDPRSEIALLEQRIEQLSDKLEGCRKFILAARIAMGVGGAback to top mRNA from alignment at P-wetherbeei_contig16798:344..709+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16798.1.1 ID=mRNA_P-wetherbeei_contig16798.1.1|Name=mRNA_P-wetherbeei_contig16798.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=366bp|location=Sequence derived from alignment at P-wetherbeei_contig16798:344..709+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16798:344..709+ >mRNA_P-wetherbeei_contig16798.1.1 ID=mRNA_P-wetherbeei_contig16798.1.1|Name=mRNA_P-wetherbeei_contig16798.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=366bp|location=Sequence derived from alignment at P-wetherbeei_contig16798:344..709+ (Phaeothamnion wetherbeei SAG_119_79)back to top |