mRNA_P-wetherbeei_contig16781.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16781.2.1 vs. uniprot
Match: A0A7Y3M6V5_9DELT (Regulator (Fragment) n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3M6V5_9DELT) HSP 1 Score: 190 bits (482), Expect = 5.320e-60 Identity = 86/103 (83.50%), Postives = 96/103 (93.20%), Query Frame = 1
Query: 28 FNLYDHAITWLPFAGIENLELTLCDIDEERRVVDLLVRFAPNKTVTMHNHLAQTNMFIVQGELRIYEPDGSIREVRAAGHYFRGRTNDAHSEGGGPAGAVVLY 336
F++YDH I W PFAGIENLEL+LCDIDEER+VVDL+VRFAPNKTVT+HNHLAQTNMFI+QGELR+YEPDGS+REVR AG Y+RGRTNDAHSEGGGP GAVV Y
Sbjct: 12 FDMYDHEIRWQPFAGIENLELSLCDIDEERKVVDLIVRFAPNKTVTLHNHLAQTNMFIIQGELRMYEPDGSVREVRPAGRYYRGRTNDAHSEGGGPQGAVVFY 114
BLAST of mRNA_P-wetherbeei_contig16781.2.1 vs. uniprot
Match: A0A1Z9U9I5_9GAMM (Uncharacterized protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9U9I5_9GAMM) HSP 1 Score: 155 bits (392), Expect = 8.680e-46 Identity = 73/146 (50.00%), Postives = 103/146 (70.55%), Query Frame = 1
Query: 1 IAMNAAQPSFNLYDHA-ITWLPFAGIENLELTLCDIDEERRVVDLLVRFAPNKTVTMHNHLAQTNMFIVQGELRIYEPDGSIREVRAAGHYFRGRTNDAHSEGGGPAGAVVLYSMRCDDAYNVLEIMDEQQRVLATLNMDDIRAAW 435
+A N S L+D + I W F +EN E +L D DE R+++DL+ +F +K +T+H H+AQTNMFIV GELRIYE DGSI+E+R AG Y G+ +D HSEGGGP GAVV YS+R D +L +++E++ ++AT+ +DD+RA W
Sbjct: 2 VASNLKSASNFLFDDSRIDWGAFPYVENAEFSLYDFDEXRQIIDLIFKFEADKKITIHTHIAQTNMFIVSGELRIYETDGSIKEIRQAGQYXXGKKDDTHSEGGGPDGAVVFYSLRGDGRQELLNVIEEEE-IIATIKLDDVRAMW 146
BLAST of mRNA_P-wetherbeei_contig16781.2.1 vs. uniprot
Match: A0A520XRQ3_9ACTN (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A520XRQ3_9ACTN) HSP 1 Score: 139 bits (350), Expect = 1.560e-39 Identity = 65/130 (50.00%), Postives = 91/130 (70.00%), Query Frame = 1
Query: 61 PFAGIENLELTLCDIDEERRVVDLLVRFAPNKTVTMHNHLAQTNMFIVQGELRIYEPDGSIREVRAAGHYFRGRTNDAHSEGGGPAGAVVLYSMRCDDAYNVLEIMDEQQRVLATLNMDDIRAAWAAQQA 450
P IE LE+ + D+D +R++ D + RF PN+ V MH H++QTNM I+ GEL+I+E DGSIR+ R AG Y+RG +DAH+EGGGP GA+VLYS+R ++EI+D++ VL L +D+ A AAQ A
Sbjct: 14 PMPAIEGLEVRVLDVDLDRQIADAVFRFPPNQLVAMHRHVSQTNMMILDGELQIFEEDGSIRDRRTAGKYYRGTRDDAHTEGGGPDGAIVLYSVRGHGVAEIIEILDDKGDVLGALTFNDVAAIEAAQSA 143
BLAST of mRNA_P-wetherbeei_contig16781.2.1 vs. uniprot
Match: A0A848V0U6_9PROT (Uncharacterized protein n=1 Tax=Hellea sp. TaxID=2715692 RepID=A0A848V0U6_9PROT) HSP 1 Score: 130 bits (326), Expect = 6.020e-36 Identity = 59/130 (45.38%), Postives = 87/130 (66.92%), Query Frame = 1
Query: 40 DHAITWLPFAGIENLELTLCDIDEERRVVDLLVRFAPNKTVTMHNHLAQTNMFIVQGELRIYEPDGSIREVRAAGHYFRGRTNDAHSEGGGPAGAVVLYSMRCDDAYNVLEIMDEQQRVLATLNMDDIRA 429
D ++P G+E LE+ + D+D R++ D + RFAP+K + H H++QTNM I+ GEL IYE DGS+R+ R AG+Y+RG+ +D+H EGGGP GA+V YS+R ++EI+ E VL L D++A
Sbjct: 5 DLTFQFIPMPGVEGLEICVLDVDLARQIADAVFRFAPDKMIANHRHVSQTNMLILSGELIIYEDDGSVRDRRTAGNYYRGKRDDSHLEGGGPDGAIVFYSVRGHGDDTIIEILGEGDIVLGKLTFADVKA 134
BLAST of mRNA_P-wetherbeei_contig16781.2.1 vs. uniprot
Match: A0A7Y3GWD1_9DELT (Regulator n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3GWD1_9DELT) HSP 1 Score: 119 bits (299), Expect = 1.320e-31 Identity = 60/137 (43.80%), Postives = 80/137 (58.39%), Query Frame = 1
Query: 40 DHAITWLPFAGIENLELTLCDIDEERRVVDLLVRFAPNKTVTMHNHLAQTNMFIVQGELRIYEPDGSIREVRAAGHYFRGRTNDAHSEGGGPAGAVVLYSMRCDDAYNVL-EIMDEQQRVLATLNMDDIRAAWAAQQ 447
D I W E+ + + D DE+RRV DL +F PNK + +H H TN F++QGE R+YEP+G+++EVR G Y + H EGGG GAVV YS+R VL E+MD+ V ATL + D A+A QQ
Sbjct: 15 DRNIHWFELGEFEHFKAAIFDFDEDRRVFDLAAKFEPNKQIFLHRHATLTNTFVLQGEHRLYEPNGALKEVRPCGTYTSSLPGEPHREGGGDDGAVVFYSIRAGAGDEVLFEVMDDALNVTATLTVSDFLEAFAEQQ 151
BLAST of mRNA_P-wetherbeei_contig16781.2.1 vs. uniprot
Match: A0A545TB78_9PROT (Regulator n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545TB78_9PROT) HSP 1 Score: 119 bits (298), Expect = 1.570e-31 Identity = 54/138 (39.13%), Postives = 88/138 (63.77%), Query Frame = 1
Query: 40 DHAITWLPFAGIENLELTLCDIDEERRVVDLLVRFAPNKTVTMHNHLAQTNMFIVQGELRIYEPDGSIREVRAAGHYFRGRTN-DAHSEGGGPAGAVVLYSMRCDDAYNVLEIMDEQQRVLATLNMDDIRAAWAAQQA 450
D I W P ++ + D+D +RR+VD ++++ P++ + MH H+ QTN ++QGE R+YEPDG++++VR G Y + D H+EGGG GA+VLYS+R D + EI+D++ V+ TL M D+ A+ Q++
Sbjct: 16 DSNIKWFPLGDFKHFVFAVLDVDNDRRIVDAVLKYEPSQKIFMHRHIQQTNTLVLQGEHRLYEPDGTLKDVRPVGRYTATPADPDPHTEGGGAEGAIVLYSIRADGDL-LFEILDDKLEVVGTLTMQDLNGAFEMQRS 152
BLAST of mRNA_P-wetherbeei_contig16781.2.1 vs. uniprot
Match: UPI0003B79A98 (hypothetical protein n=1 Tax=Nevskia ramosa TaxID=64002 RepID=UPI0003B79A98) HSP 1 Score: 116 bits (290), Expect = 2.080e-30 Identity = 58/136 (42.65%), Postives = 83/136 (61.03%), Query Frame = 1
Query: 40 DHAITWLPFAGIENLELTLCDIDEERRVVDLLVRFAPNKTVTMHNHLAQTNMFIVQGELRIYEPDGSIREVRAAGHYFRGRTN-DAHSEGGGPAGAVVLYSMRCDDAYNVLEIMDEQQRVLATLNMDDIRAAWAAQ 444
D I W GI +LE T+ ID R+ D+L RFA N+ + +H HLA + F+VQGE R+YEPDG I+E+R G Y N + H EGGG +VL+S+R D + E++D+ + ++ TL M D+ A +AAQ
Sbjct: 8 DRQIQWSRLDGIAHLEYTVLSIDPPRQTADVLFRFAANEQIVLHRHLALNHTFVVQGEHRLYEPDGRIKEIRPTGSYTISPPNPEPHREGGGAEDVIVLFSIRGSDGL-LYELLDDARNIIGTLTMQDLTALYAAQ 142
BLAST of mRNA_P-wetherbeei_contig16781.2.1 vs. uniprot
Match: UPI00142B1AEF (regulator n=1 Tax=Candidatus Methylobacter favarea TaxID=2707345 RepID=UPI00142B1AEF) HSP 1 Score: 115 bits (288), Expect = 4.290e-30 Identity = 58/142 (40.85%), Postives = 85/142 (59.86%), Query Frame = 1
Query: 25 SFNLYDHAITWLPFAGIENLELTLCDIDEERRVVDLLVRFAPNKTVTMHNHLAQTNMFIVQGELRIYEPDGSIREVRAAGHYFRGR-TNDAHSEGGGPAGAVVLYSMRCDDAYNVLEIMDEQQRVLATLNMDDIRAAWAAQQ 447
S+ D I W G +NL ++ DIDE +++D+L +FA N+ + +H HLA N F++QGE R+YE DG+++EVR G Y ++D H EGGG A+V +S+R D EI+D+ V+ATL M D+ AQQ
Sbjct: 3 SYLFDDCNIQWQHLEGFDNLAYSILDIDENNKIIDVLFKFAANRRIVLHRHLALNNTFVIQGEHRLYEADGALKEVRPVGRYTSSPPSDDPHREGGGDMDAIVFFSIRGSDGV-CYEILDDDLTVIATLGMQDLIGLCKAQQ 143
BLAST of mRNA_P-wetherbeei_contig16781.2.1 vs. uniprot
Match: A0A4Q0MQQ2_9HYPH (Regulator n=1 Tax=Hansschlegelia zhihuaiae TaxID=405005 RepID=A0A4Q0MQQ2_9HYPH) HSP 1 Score: 114 bits (286), Expect = 7.900e-30 Identity = 55/142 (38.73%), Postives = 83/142 (58.45%), Query Frame = 1
Query: 22 PSFNLYDHAITWLPFAGIENLELTLCDIDEERRVVDLLVRFAPNKTVTMHNHLAQTNMFIVQGELRIYEPDGSIREVRAAGHYFRGRTN-DAHSEGGGPAGAVVLYSMRCDDAYNVLEIMDEQQRVLATLNMDDIRAAWAAQ 444
P F D ITW G +++ + +DEE R+VDLL RFA N+ + +H H+A F+VQGELRIY PDG+++E+R G Y + H EGGG A+V ++ R D + EI+D++ ++AT + + +A AQ
Sbjct: 2 PEFGFDDSDITWRTIEGFDHIAYCILSVDEEARIVDLLFRFAANERIALHRHMADYRTFVVQGELRIYRPDGTLKEIRPVGSYVAAAAGGEPHREGGGDRDAIVYFTNRNVDG-PIYEILDDRHDIIATFGVPEFKALLEAQ 142
BLAST of mRNA_P-wetherbeei_contig16781.2.1 vs. uniprot
Match: A0A0Q7CW99_9BURK (Regulator n=2 Tax=Methylibium sp. Root1272 TaxID=1736441 RepID=A0A0Q7CW99_9BURK) HSP 1 Score: 114 bits (285), Expect = 1.570e-29 Identity = 54/142 (38.03%), Postives = 85/142 (59.86%), Query Frame = 1
Query: 25 SFNLYDHAITWLPFAGIENLELTLCDIDEERRVVDLLVRFAPNKTVTMHNHLAQTNMFIVQGELRIYEPDGSIREVRAAGHYFRGRTNDA-HSEGGGPAGAVVLYSMRCDDAYNVLEIMDEQQRVLATLNMDDIRAAWAAQQ 447
++ D W G ++L ++ +IDE R D+L +FA N+ + +H H+A N F++QGE R+YEPDG ++EVR G Y N A H EGGG V+L+S+R +D + E++D+ Q +AT++M D+ A + QQ
Sbjct: 3 AYQFDDRNTRWNTLGGFQHLAYSILNIDEARLTADVLFKFAANQKIALHRHMALNNTFVIQGEHRLYEPDGRLKEVRPVGSYTSSPANPAPHREGGGDQDVVILFSIRGNDGV-LYEVLDDDQNTIATISMQDLAALYQLQQ 143 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16781.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16781.2.1 >prot_P-wetherbeei_contig16781.2.1 ID=prot_P-wetherbeei_contig16781.2.1|Name=mRNA_P-wetherbeei_contig16781.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=149bp MNAAQPSFNLYDHAITWLPFAGIENLELTLCDIDEERRVVDLLVRFAPNKback to top mRNA from alignment at P-wetherbeei_contig16781:906..1358+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16781.2.1 ID=mRNA_P-wetherbeei_contig16781.2.1|Name=mRNA_P-wetherbeei_contig16781.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=453bp|location=Sequence derived from alignment at P-wetherbeei_contig16781:906..1358+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16781:906..1358+ >mRNA_P-wetherbeei_contig16781.2.1 ID=mRNA_P-wetherbeei_contig16781.2.1|Name=mRNA_P-wetherbeei_contig16781.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig16781:906..1358+ (Phaeothamnion wetherbeei SAG_119_79)back to top |