mRNA_P-wetherbeei_contig16762.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16762.3.1 vs. uniprot
Match: A0A077ZLA3_TRITR (Uncharacterized protein n=1 Tax=Trichuris trichiura TaxID=36087 RepID=A0A077ZLA3_TRITR) HSP 1 Score: 152 bits (383), Expect = 1.110e-42 Identity = 97/197 (49.24%), Postives = 116/197 (58.88%), Query Frame = 1
Query: 1 LISDQLEPTIARLRYSLGGDRPSQTTRHAGSPPQVHAARLDIRERKGGISPVPPSQLTPELHRLPPILHIHSLIPLQSCSKGARGL--SNSISLSRCWRQWGSXXXX----------------VIVTAAVYWGFDSSLAALLLTFQHRAGVSPYTSSYEFAEACVFSKQSPPPGLCHLTTLARRKVPLLPKLRGQFA 537
+IS EP+ RLRY LGGDRPSQT R SP Q+H RL+ ++ KGGI V P +LTP LPPIL+++ I L+ G+ +IS R RQ + VIVTAAV+WGFDS LA LLLTFQHRAGVS YTSS++ A+ CVF KQ P LC + A PLLPKLRGQFA
Sbjct: 1 MISIHAEPSFERLRYFLGGDRPSQTARLTVSPDQIHGRRLETQQSKGGIPRVTPQKLTPLFLSLPPILYMNYRISLR-----VTGIFTGTTISPGRLLRQCPNRYAIRAGQNLPDKEFRYLRTVIVTAAVHWGFDSMLAHLLLTFQHRAGVSSYTSSFDLAQTCVFGKQLLGPILCGSISGA----PLLPKLRGQFA 188
BLAST of mRNA_P-wetherbeei_contig16762.3.1 vs. uniprot
Match: Q3BKH9_9PROT (Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense TaxID=55518 RepID=Q3BKH9_9PROT) HSP 1 Score: 135 bits (341), Expect = 1.210e-37 Identity = 67/87 (77.01%), Postives = 73/87 (83.91%), Query Frame = 1
Query: 1 LISDQLEPTIARLRYSLGGDRPSQTTRHAGSPPQVHAARLDIRERKGGISPVPPSQLTPELHRLPPILHIHSLIPLQSCSKGARGLS 261
LISDQLE TIARLRYSLGGDRPSQTT HAGS + H +RLD R++KGGIS + P QL P H LPPILHIHSL+PLQSCSKGARGLS
Sbjct: 62 LISDQLELTIARLRYSLGGDRPSQTTHHAGSRARFHGSRLDTRKQKGGISRMAPHQLAPMFHSLPPILHIHSLVPLQSCSKGARGLS 148
BLAST of mRNA_P-wetherbeei_contig16762.3.1 vs. uniprot
Match: C7H9G6_FAEPA (Uncharacterized protein (Fragment) n=10 Tax=Eubacteriales TaxID=186802 RepID=C7H9G6_FAEPA) HSP 1 Score: 138 bits (348), Expect = 4.760e-37 Identity = 95/206 (46.12%), Postives = 110/206 (53.40%), Query Frame = 1
Query: 1 LISDQLEPTIARLRYSLGGDRPSQTTRHAGSPPQVHAARLDIRERKGGISPVPPSQLTPELHRLPPILHIHSLIPLQSCSKGARGLS-----------NSISLSRCWRQWGSXXXX----------------VIVTAAVYWGFDSSLAALLLTFQHRAGVSPYTSSYEFAEACVFSKQSPPPGLCHLTTLARRKVPLLPKLRGQFA 537
LIS Q E T RLRYSLGGDRPSQT SP + + RL+ + RK GI P + P R+P IL + P+ SK GLS +IS RQ + VIVTAAV+WGFDS LA LLLTFQHRAGVS YTSS++ A+ CVF KQ P LC + A PLLPKLRGQFA
Sbjct: 22 LISVQAERTSERLRYSLGGDRPSQTAHLTMSPDSIQSRRLEFQYRKDGIPTASPPKPKPWFPRVPSILCMQHRNPILGYSKAPWGLSVLSRVTGIFTGTTISPGGLLRQCPNHYAFHAGQNLPDKEFRYLRTVIVTAAVHWGFDSMLAHLLLTFQHRAGVSSYTSSFDLAQTCVFGKQLLGPILCGSISGA----PLLPKLRGQFA 223
BLAST of mRNA_P-wetherbeei_contig16762.3.1 vs. uniprot
Match: A0A6A5KV19_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5KV19_LUPAL) HSP 1 Score: 137 bits (346), Expect = 8.240e-36 Identity = 92/185 (49.73%), Postives = 101/185 (54.59%), Query Frame = 1
Query: 4 ISDQLEPTIARLRYSLGGDRPSQTTRHAGSPPQVHAARLDIRERKGGISPVPPSQLTPELH-------RLPPILHIHSLIPLQSCSKGARGLSNSISLSRCWRQWGSXXXXVIVTAAVYWGFDSSLAALLLTFQHRAGVSPYTSSYEFAEACVFSKQSPPPGLCHLTTLARRKVPLLPKLRGQFA 537
ISD+ EPTIARLRYS GGDRPSQTT H S R+ + +R S PS L + I+ +H + G R VIVTAAVYWGFDS LA LLLTFQHRAGV PYTSS +FAE CVF KQS PPGLCH LA V LLPKLR QFA
Sbjct: 56 ISDRSEPTIARLRYSFGGDRPSQTTHHTLS-------RIRMTDRGWLHSNWRPSFKAYHLSYTCRHECQCKAIVKVHGRGSRYAIRAGRNLPDKEFRYLRT----------VIVTAAVYWGFDSKLAPLLLTFQHRAGVRPYTSSCDFAEPCVFDKQSLPPGLCHPKILAYIGVTLLPKLRVQFA 223
BLAST of mRNA_P-wetherbeei_contig16762.3.1 vs. uniprot
Match: A0A8D8MY37_CULPI (Uncharacterized protein ORF91 n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8MY37_CULPI) HSP 1 Score: 126 bits (317), Expect = 2.010e-33 Identity = 79/156 (50.64%), Postives = 92/156 (58.97%), Query Frame = 1
Query: 106 HAARLDIRERKGGISPVPPSQLTPELHRLPPILHIHSLIPLQSCSKGARGLS-----------NSISLSRCWRQWGSXXXX----------------VIVTAAVYWGFDSSLAALLLTFQHRAGVSPYTSSYEFAEACVFSKQSPPPGLCHLTTLA 492
+ + L+ + KGGIS P +L L LPPILHI + + S SKG+RGLS +SISLS WRQ G VIVTAAVYWGF+S LA LLLTFQHRAGV PYTS+Y FAE+CVFSKQS P LCHL +A
Sbjct: 42 YGSTLEHQTLKGGISRSAPCRLASTLQSLPPILHIKAQCSVSSYSKGSRGLSVLPRVHCIFTASSISLSLGWRQPGHHYAIRAGRNLPDKEFRYLRTVIVTAAVYWGFNSELAPLLLTFQHRAGVRPYTSTYVFAESCVFSKQSLLPILCHLLIVA 197
BLAST of mRNA_P-wetherbeei_contig16762.3.1 vs. uniprot
Match: A0A6A5L965_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L965_LUPAL) HSP 1 Score: 132 bits (333), Expect = 1.280e-32 Identity = 84/174 (48.28%), Postives = 89/174 (51.15%), Query Frame = 1
Query: 4 ISDQLEPTIARLRYSLGGDRPSQTTRHAGSPPQVHAARLDIRERKGGISPVPPSQLTPELHRLPPILHIHSLIPLQSCSKGARGLSNSISLSRCWRQWGSXXXX----------------VIVTAAVYWGFDSSLAALLLTFQHRAGVSPYTSSYEFAEACVFSKQSPPPGLCH 477
ISD+ EPTIARLRYS GGDRPSQTT H S ++ + R G NSISLS CWRQ GS VIVTAAVYWGFDS LA LLLTFQHRAGV PYTSS +FAE CVF KQS PPGLCH
Sbjct: 377 ISDRSEPTIARLRYSFGGDRPSQTTHHTLS--RIRMTTAEPRIFTG----------------------------------------NSISLSLCWRQRGSRYAIRAGRNLPDKEFRYLRTVIVTAAVYWGFDSKLAPLLLTFQHRAGVRPYTSSCDFAEPCVFDKQSLPPGLCH 508
BLAST of mRNA_P-wetherbeei_contig16762.3.1 vs. uniprot
Match: A0A6A5L776_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L776_LUPAL) HSP 1 Score: 112 bits (281), Expect = 3.310e-28 Identity = 58/74 (78.38%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 316 VIVTAAVYWGFDSSLAALLLTFQHRAGVSPYTSSYEFAEACVFSKQSPPPGLCHLTTLARRKVPLLPKLRGQFA 537
VIVTAAVYWGFDS LA LLLTFQHRAGV PYTSS +FAE CVF KQS PPGLCH LA V LLPKLR QFA
Sbjct: 66 VIVTAAVYWGFDSKLAPLLLTFQHRAGVRPYTSSCDFAEPCVFDKQSLPPGLCHPKILAYIGVTLLPKLRVQFA 139
BLAST of mRNA_P-wetherbeei_contig16762.3.1 vs. uniprot
Match: B0P655_9FIRM (Uncharacterized protein n=2 Tax=Anaerotruncus colihominis DSM 17241 TaxID=445972 RepID=B0P655_9FIRM) HSP 1 Score: 111 bits (277), Expect = 9.800e-28 Identity = 73/170 (42.94%), Postives = 90/170 (52.94%), Query Frame = 1
Query: 1 LISDQLEPTIARLRYSLGGDRPSQTTRHAGSPPQVHAARLDIRERKGGISPVPPSQLTPELHRLPPILHIHSLIPLQSCSKGARGLS-----------NSISLSRCWRQWGSXXXX----------------VIVTAAVYWGFDSSLAALLLTFQHRAGVSPYTSSYEFA 429
++S EPT RLRY GGDRPSQT R SP ++H RL+ + K GI P+ L L LPPIL++ P+ SCSK GLS +IS RQ VIVTAAVY GF+S L+ LLLTF+HRAGV+PYTSS++ A
Sbjct: 1 MVSVHAEPTFERLRYLFGGDRPSQTARLTLSPDRIHGRRLEFQHLKSGIPTPAPATLACCLLCLPPILYMKYRNPILSCSKAPWGLSVLSRVTGIFTGTTISPGGLLRQCPDRYTIRAGQNLPDKEFRYLRTVIVTAAVYRGFNSELSLLLLTFRHRAGVTPYTSSFDLA 170
BLAST of mRNA_P-wetherbeei_contig16762.3.1 vs. uniprot
Match: A0A7S3IBR0_9CILI (Hypothetical protein (Fragment) n=1 Tax=Anophryoides haemophila TaxID=46462 RepID=A0A7S3IBR0_9CILI) HSP 1 Score: 103 bits (258), Expect = 1.750e-25 Identity = 56/80 (70.00%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 316 VIVTAAVYWGFDSSLAALLLTFQHRAGVSPYTSSYEFAEACVFSKQSPPPGLCHLTTLARRK------VPLLPKLRGQFA 537
VIVTAAVYWGF+S LA LLLTFQHRAGV PYTSS +FAE CVFSKQS P LC T RK P LPKLRGQFA
Sbjct: 33 VIVTAAVYWGFNSELAPLLLTFQHRAGVRPYTSSCDFAEPCVFSKQSLSPSLCDHPTPTNRKSRRPKVAPHLPKLRGQFA 112
BLAST of mRNA_P-wetherbeei_contig16762.3.1 vs. uniprot
Match: A0A2S2NGY3_SCHGA (Uncharacterized protein (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2NGY3_SCHGA) HSP 1 Score: 99.0 bits (245), Expect = 1.090e-23 Identity = 52/74 (70.27%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 316 VIVTAAVYWGFDSSLAALLLTFQHRAGVSPYTSSYEFAEACVFSKQSPPPGLCHLTTLARRKVPLLPKLRGQFA 537
VIVTAAVY GF+S LA LLLTF+HRAGV PYTSS +FAE CVFSKQSPPPGLC LA++ LL LR FA
Sbjct: 11 VIVTAAVYRGFNSELAPLLLTFRHRAGVRPYTSSCDFAEPCVFSKQSPPPGLCPRPLLAQKPGLLLANLRRYFA 84 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16762.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16762.3.1 >prot_P-wetherbeei_contig16762.3.1 ID=prot_P-wetherbeei_contig16762.3.1|Name=mRNA_P-wetherbeei_contig16762.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp LISDQLEPTIARLRYSLGGDRPSQTTRHAGSPPQVHAARLDIRERKGGISback to top mRNA from alignment at P-wetherbeei_contig16762:905..1477- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16762.3.1 ID=mRNA_P-wetherbeei_contig16762.3.1|Name=mRNA_P-wetherbeei_contig16762.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=573bp|location=Sequence derived from alignment at P-wetherbeei_contig16762:905..1477- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16762:905..1477- >mRNA_P-wetherbeei_contig16762.3.1 ID=mRNA_P-wetherbeei_contig16762.3.1|Name=mRNA_P-wetherbeei_contig16762.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig16762:905..1477- (Phaeothamnion wetherbeei SAG_119_79)back to top |