mRNA_P-wetherbeei_contig1676.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1676.6.1 vs. uniprot
Match: A0A3C0TRA7_9PROT (Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TRA7_9PROT) HSP 1 Score: 444 bits (1142), Expect = 3.090e-154 Identity = 208/276 (75.36%), Postives = 247/276 (89.49%), Query Frame = 1
Query: 1 GARIPVKDLLRGIIVQSGNDACVVVAEGLGGDEKNFARMMTERAREIGMTHSTFRNASGWPDPEHMMTARDLAVLAAYLVNTHKQYYSIFSEMDFTWHGIRQGNRNPLLYSYPGADGLKTGHTEEAGYGLTGSAERNGRRLIVVVTGLESDKRRGIEAERLLTLGFNDFETYTLLSAGQKLEDADVWLGEADKIPLVAGKDIRVTLPRAARKSMQAKLVYQAPLAAPVVKGAQVGAVTFTATGMQPVTVPVVAGEAVERLGFFGKIPAAFNYLLWG 828
GA+IPV DLLRGIIVQSGNDACVVVAEG+GGDE+ FARMMTERAR+IG+THS FRN+SGWPDPEH+MTARDLA+L+ Y++ HKQYYS+F+E+DFTWHGI+QGNRNPLLYS+PGADGLKTGHTEEAGYGL GSA R+GRRLIVVVTG+ESD++RGIEA RLLTLGF +F+ YTL+ AGQK+EDADVWLG K+PLVA +++++TLPRAARK ++AKLVYQAPL AP+ KGA+ G + FTA GM PV+VPVV G+ VE+L F KIPAAFNYL+WG
Sbjct: 104 GAQIPVADLLRGIIVQSGNDACVVVAEGIGGDEQTFARMMTERARQIGLTHSVFRNSSGWPDPEHVMTARDLAILSDYIITRHKQYYSMFAEIDFTWHGIKQGNRNPLLYSFPGADGLKTGHTEEAGYGLVGSAVRDGRRLIVVVTGMESDRKRGIEAARLLTLGFGEFDNYTLVKAGQKVEDADVWLGSVKKVPLVAAREVKLTLPRAARKELKAKLVYQAPLPAPLEKGAEAGVINFTAPGMAPVSVPVVTGDEVEKLSFLSKIPAAFNYLMWG 379
BLAST of mRNA_P-wetherbeei_contig1676.6.1 vs. uniprot
Match: A0A3C1FSK7_9PROT (D-alanyl-D-alanine carboxypeptidase (Fragment) n=5 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C1FSK7_9PROT) HSP 1 Score: 333 bits (853), Expect = 2.450e-112 Identity = 159/247 (64.37%), Postives = 195/247 (78.95%), Query Frame = 1
Query: 100 KNFARMMTERAREIGMTHSTFRNASGWPDPEHMMTARDLAVLAAYLVNTHKQYYSIFSEMDFTWHGIRQGNRNPLLYSYPGADGLKTGHTEEAGYGLTGSAERNGRRLIVVVTGLESDKRRGIEAERLLTLGFNDFETYTLLSAGQKLEDADVWLGEADKIPLVAGKDIRVTLPRAARKSMQAKLVYQAPLAAPVVKGAQVGAVTFTATGMQPVTVPVVAGEAVERLGFFGKIPAAFNYLLWGASSG 840
+ FA MMT+R REIG+T+STFRNA+GWPDPEH MTARDLA LA ++V + YY++F+E +FTW GIRQ NRNPLL SY GADGLKTGHTE AGYGL SAER+GRRLI VV GL SD+ R E+ RLL +GF +F+ YTLLSAGQ +++ADVWLG+ D IPLV +R+TLPR R+ ++AKL YQ P+ APV KGAQ+G + TA M P+ +PV+AGE+ +LGFFG+I AAFNYLLWGASSG
Sbjct: 1 ETFAAMMTDRGREIGLTNSTFRNATGWPDPEHQMTARDLATLARFMVRNYPDYYALFAETEFTWQGIRQPNRNPLLGSYRGADGLKTGHTESAGYGLVASAERDGRRLISVVNGLGSDRERAAESRRLLNIGFQEFDNYTLLSAGQTVDEADVWLGDRDHIPLVVADQLRLTLPRDVRQGLEAKLHYQNPVPAPVEKGAQIGTLRLTAPEMAPIEIPVLAGESAGKLGFFGRISAAFNYLLWGASSG 247
BLAST of mRNA_P-wetherbeei_contig1676.6.1 vs. uniprot
Match: UPI0019D27DFA (D-alanyl-D-alanine carboxypeptidase n=1 Tax=Sneathiella limimaris TaxID=1964213 RepID=UPI0019D27DFA) HSP 1 Score: 332 bits (850), Expect = 6.130e-110 Identity = 162/277 (58.48%), Postives = 207/277 (74.73%), Query Frame = 1
Query: 7 RIPVKDLLRGIIVQSGNDACVVVAEGLGGDEKNFARMMTERAREIGMTHSTFRNASGWPDPEHMMTARDLAVLAAYLVNTHKQYYSIFSEMDFTWHGIRQGNRNPLLYSYPGADGLKTGHTEEAGYGLTGSAERNGRRLIVVVTGLESDKRRGIEAERLLTLGFNDFETYTLLSAGQKLEDADVWLGEADKIPLVAGKDIRVTLPRAARKSMQAKLVYQAPLAAPVVKGAQVGAVTFTATGMQPVTVPVVAGEAVERLGFFGKIPAAFNYLLWGASS 837
R+ V DLLRGIIVQSGNDAC+VVAE LGG E+ FA+ MT+RAREIG+THSTFRNA+GWP PEH+MTARDLA LA Y++ +YY IF+E FT+ GI+QGNRNPLLYS GADGLKTGHTE++GYGL SA+R RRLI+V GL S K RG EAERL+ GF +F+ Y L AGQ++ A VWLG D +PL KD++VT+ R R+SMQ KLVY P+ AP++KG+ V + TA M+ + VP++A E +ER G ++ AA Y+++GA++
Sbjct: 103 RVKVTDLLRGIIVQSGNDACIVVAEALGGSEEAFAQSMTDRAREIGLTHSTFRNATGWPHPEHLMTARDLATLADYIIRNFPEYYGIFNEKSFTYSGIKQGNRNPLLYSNSGADGLKTGHTEDSGYGLVASAKRGDRRLILVFNGLGSAKERGREAERLMEWGFREFDNYALYKAGQEVAKARVWLGAKDLVPLYIEKDLKVTMSRKDRRSMQVKLVYNEPIPAPIIKGSPVARLVITAPEMETIEVPLLASENIERPGVVKRVMAAIKYVIFGATA 379
BLAST of mRNA_P-wetherbeei_contig1676.6.1 vs. uniprot
Match: UPI00187B6D4D (D-alanyl-D-alanine carboxypeptidase n=1 Tax=Sneathiella sp. P13V-1 TaxID=2697366 RepID=UPI00187B6D4D) HSP 1 Score: 330 bits (847), Expect = 2.260e-109 Identity = 163/277 (58.84%), Postives = 207/277 (74.73%), Query Frame = 1
Query: 7 RIPVKDLLRGIIVQSGNDACVVVAEGLGGDEKNFARMMTERAREIGMTHSTFRNASGWPDPEHMMTARDLAVLAAYLVNTHKQYYSIFSEMDFTWHGIRQGNRNPLLYSYPGADGLKTGHTEEAGYGLTGSAERNGRRLIVVVTGLESDKRRGIEAERLLTLGFNDFETYTLLSAGQKLEDADVWLGEADKIPLVAGKDIRVTLPRAARKSMQAKLVYQAPLAAPVVKGAQVGAVTFTATGMQPVTVPVVAGEAVERLGFFGKIPAAFNYLLWGASS 837
R+ V+DLLRGIIVQSGNDAC+VVAE LGG E+ FA+ MT+RAREIG+ STFRNA+GWPDP H MTARDLA LA Y++ +YY IFSE FT+ I+QGNRNPLLYS GADGLKTGHTEE+GYGLTGSA+R+ RRLI+VV GL S K+RG E+ER+L GF +F+ Y L Q++ A VWLG D +PL+ +D+ VT+ R R+SMQ KLVY P+ AP++KG V + TA M+ + VP++A E VER G F ++ +A Y+L+GAS+
Sbjct: 111 RVAVQDLLRGIIVQSGNDACIVVAEALGGSEEAFAQTMTDRAREIGLEQSTFRNATGWPDPNHRMTARDLATLAKYIIKNFPEYYGIFSEKSFTFSKIKQGNRNPLLYSNSGADGLKTGHTEESGYGLTGSAKRDDRRLILVVNGLNSAKQRGRESERILEWGFREFDNYALFKKDQEVAKARVWLGAKDLVPLMVDEDLTVTMSRKNRRSMQVKLVYNEPVPAPIIKGTPVARLVITAPEMENIEVPLLAAENVERPGLFKRVASAIKYVLFGASA 387
BLAST of mRNA_P-wetherbeei_contig1676.6.1 vs. uniprot
Match: UPI001900709B (D-alanyl-D-alanine carboxypeptidase n=1 Tax=Sneathiella glossodoripedis TaxID=418853 RepID=UPI001900709B) HSP 1 Score: 329 bits (844), Expect = 3.960e-109 Identity = 160/279 (57.35%), Postives = 206/279 (73.84%), Query Frame = 1
Query: 1 GARIPVKDLLRGIIVQSGNDACVVVAEGLGGDEKNFARMMTERAREIGMTHSTFRNASGWPDPEHMMTARDLAVLAAYLVNTHKQYYSIFSEMDFTWHGIRQGNRNPLLYSYPGADGLKTGHTEEAGYGLTGSAERNGRRLIVVVTGLESDKRRGIEAERLLTLGFNDFETYTLLSAGQKLEDADVWLGEADKIPLVAGKDIRVTLPRAARKSMQAKLVYQAPLAAPVVKGAQVGAVTFTATGMQPVTVPVVAGEAVERLGFFGKIPAAFNYLLWGASS 837
G R+ V DLLRGII+QSGNDAC+VVAE LGG E+ FA+ MTERAREIG+ HSTF+NA+GWP PEH MTARDLA+LA Y++ +YY +F+E FT+ I+QGNRNPLLY+ GADGLKTGHTEE+GYGLTGSA+R RRLI+V+ GL S + RG EAER++ GF +F+ Y L G ++ A VWLG D +PL +D+ VT+ R R+SMQ KLVY P+ AP++KG+ V + TA M P+ VP++A E VER G ++ AA Y+L+GAS+
Sbjct: 94 GKRVKVSDLLRGIIIQSGNDACIVVAEALGGSEEGFAQAMTERAREIGLMHSTFKNATGWPHPEHRMTARDLAILAKYIIKNFPEYYGLFAEKSFTFSKIKQGNRNPLLYTNSGADGLKTGHTEESGYGLTGSAKRGDRRLILVLNGLGSARERGREAERIMEWGFREFDNYALFKKGDEVAKARVWLGAKDLVPLQVDEDLTVTMSRKDRRSMQVKLVYNEPIPAPIIKGSPVARLLITAPEMDPIEVPLLAAENVERPGVVKRVMAAVKYVLFGASA 372
BLAST of mRNA_P-wetherbeei_contig1676.6.1 vs. uniprot
Match: A0A1Y5E892_9PROT (Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Alphaproteobacteria bacterium 46_93_T64 TaxID=1856292 RepID=A0A1Y5E892_9PROT) HSP 1 Score: 326 bits (836), Expect = 1.120e-107 Identity = 162/277 (58.48%), Postives = 204/277 (73.65%), Query Frame = 1
Query: 7 RIPVKDLLRGIIVQSGNDACVVVAEGLGGDEKNFARMMTERAREIGMTHSTFRNASGWPDPEHMMTARDLAVLAAYLVNTHKQYYSIFSEMDFTWHGIRQGNRNPLLYSYPGADGLKTGHTEEAGYGLTGSAERNGRRLIVVVTGLESDKRRGIEAERLLTLGFNDFETYTLLSAGQKLEDADVWLGEADKIPLVAGKDIRVTLPRAARKSMQAKLVYQAPLAAPVVKGAQVGAVTFTATGMQPVTVPVVAGEAVERLGFFGKIPAAFNYLLWGASS 837
R+ V DLLRGII+QSGNDAC+VVAE LGG E+ FA MTERAREIG+T STFRN++GWPDP H MTARDLA+LA Y++ ++YSIFSE FT+ I+QGNRNPLLYS GADGLKTGHTEE+GYGLTGSA+R RRLIVV GL S K RG E++R+L GF +F+ Y L Q++ A VWLG D +PL D+ VT+ R R+SMQ KLVY P+ AP++KG+ V + TA M+ + VP++A E VER G ++ AA +Y+L+GAS+
Sbjct: 113 RVKVSDLLRGIIIQSGNDACIVVAEALGGSEEGFALTMTERAREIGLTQSTFRNSTGWPDPNHRMTARDLAILAKYIIKNFPEHYSIFSEKSFTFSKIKQGNRNPLLYSNSGADGLKTGHTEESGYGLTGSAKRGDRRLIVVTNGLTSAKERGRESDRILEWGFREFDNYALFKKDQEVAKARVWLGAKDLVPLHVENDLLVTMSRKNRRSMQVKLVYNEPIPAPIIKGSAVARLVITAPDMEKIEVPLLASENVERPGVAKRVMAAISYVLFGASA 389
BLAST of mRNA_P-wetherbeei_contig1676.6.1 vs. uniprot
Match: A0A2G1Z288_9PROT (Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Sneathiella sp. TaxID=1964365 RepID=A0A2G1Z288_9PROT) HSP 1 Score: 325 bits (832), Expect = 3.590e-107 Identity = 163/277 (58.84%), Postives = 203/277 (73.29%), Query Frame = 1
Query: 7 RIPVKDLLRGIIVQSGNDACVVVAEGLGGDEKNFARMMTERAREIGMTHSTFRNASGWPDPEHMMTARDLAVLAAYLVNTHKQYYSIFSEMDFTWHGIRQGNRNPLLYSYPGADGLKTGHTEEAGYGLTGSAERNGRRLIVVVTGLESDKRRGIEAERLLTLGFNDFETYTLLSAGQKLEDADVWLGEADKIPLVAGKDIRVTLPRAARKSMQAKLVYQAPLAAPVVKGAQVGAVTFTATGMQPVTVPVVAGEAVERLGFFGKIPAAFNYLLWGASS 837
R+ V DLLRGIIVQSGNDAC+VVAEGL G E+ FA MT+RARE+G+ STF+NA+GWPDPEH MTAR+LA LA Y++ T +YYSIF+E +FT+ I+QGNRNPLLY G+DGLKTGHTEE+GYGL GSAERNGRRLIVVV GL S K RG EAERLL GF +F Y L + G +++A VWLG D +PL +D+ +TL R ARKSM K+VY AP+ AP++KG V + VTVP+VA + + R G G++ +A YL++G SS
Sbjct: 106 RVAVGDLLRGIIVQSGNDACIVVAEGLSGSEEAFAVAMTDRARELGLEQSTFKNATGWPDPEHRMTARELAQLARYIIETFPEYYSIFNEREFTYSDIKQGNRNPLLYKKNGSDGLKTGHTEESGYGLVGSAERNGRRLIVVVNGLTSVKERGREAERLLEWGFREFGNYALFNPGDVVDNARVWLGSEDTVPLTVEEDVVITLSRQARKSMIVKVVYDAPIPAPILKGTPVAQLVVETPDAAAVTVPLVATKDIARPGMVGRLTSAVEYLIFGPSS 382
BLAST of mRNA_P-wetherbeei_contig1676.6.1 vs. uniprot
Match: UPI001469B263 (D-alanyl-D-alanine carboxypeptidase n=1 Tax=Sneathiella chinensis TaxID=349750 RepID=UPI001469B263) HSP 1 Score: 318 bits (814), Expect = 2.380e-104 Identity = 158/278 (56.83%), Postives = 199/278 (71.58%), Query Frame = 1
Query: 4 ARIPVKDLLRGIIVQSGNDACVVVAEGLGGDEKNFARMMTERAREIGMTHSTFRNASGWPDPEHMMTARDLAVLAAYLVNTHKQYYSIFSEMDFTWHGIRQGNRNPLLYSYPGADGLKTGHTEEAGYGLTGSAERNGRRLIVVVTGLESDKRRGIEAERLLTLGFNDFETYTLLSAGQKLEDADVWLGEADKIPLVAGKDIRVTLPRAARKSMQAKLVYQAPLAAPVVKGAQVGAVTFTATGMQPVTVPVVAGEAVERLGFFGKIPAAFNYLLWGASS 837
+R+ V DLLRGIIVQSGNDAC+VVAE L G E+ FAR MTE AR IG+ STF NA+GWPDP H+MT +LA LA Y++ YY IF+E F + I+QGNRNPLLY G DGLKTGHTEE+GYGL GSAER+GRRLI+VV GLE+ K RG EAERLL GF +F Y L +AGQ++ +A VWLG D +PL KD+ VT+ R R+SMQ KLVY P+ AP+++G V + +A M + VP+VA E +ER G F ++ +A Y+L+GAS+
Sbjct: 112 SRVSVSDLLRGIIVQSGNDACIVVAEALAGSEEEFARNMTEHARTIGLEQSTFANATGWPDPNHLMTPHELAELAEYIIRNFPDYYEIFAEKSFKYGKIKQGNRNPLLYDNGGGDGLKTGHTEESGYGLVGSAERDGRRLILVVNGLENAKSRGREAERLLEWGFREFGNYELFTAGQEVAEARVWLGAKDLVPLAVEKDLTVTMSRKDRRSMQVKLVYNEPIPAPILQGTPVARLVISAPDMDSIEVPLVATENIERPGMFRRVTSAIKYVLFGASA 389
BLAST of mRNA_P-wetherbeei_contig1676.6.1 vs. uniprot
Match: UPI00115F421D (D-alanyl-D-alanine carboxypeptidase n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115F421D) HSP 1 Score: 316 bits (810), Expect = 8.190e-104 Identity = 155/276 (56.16%), Postives = 203/276 (73.55%), Query Frame = 1
Query: 1 GARIPVKDLLRGIIVQSGNDACVVVAEGLGGDEKNFARMMTERAREIGMTHSTFRNASGWPDPEHMMTARDLAVLAAYLVNTHKQYYSIFSEMDFTWHGIRQGNRNPLLYSYPGADGLKTGHTEEAGYGLTGSAERNGRRLIVVVTGLESDKRRGIEAERLLTLGFNDFETYTLLSAGQKLEDADVWLGEADKIPLVAGKDIRVTLPRAARKSMQAKLVYQAPLAAPVVKGAQVGAVTFTATGMQPVTVPVVAGEAVERLGFFGKIPAAFNYLLWG 828
G ++ V+DLLRG+IVQSGNDAC+V+AEGL G E+ FA M RAREIG+T STFRNA+GWPD H+MTARDLA LA L+ H +YY ++SE +FT+ GI QGNRNPLLY GADGLKTGHTE AGYGLT S +R+GRRLI+VV GL+S ++R E+ RLL GF +F+ YTL AG+ +A+VWLG+ +PL+A VTLPR AR++M+ K VY+ P+AAP+ KG Q+ + + P+ +P+ AG VERLGF G+I AA ++++G
Sbjct: 108 GDQVSVEDLLRGVIVQSGNDACIVLAEGLAGSEEAFAERMNRRAREIGLTSSTFRNATGWPDEGHLMTARDLATLARRLIMDHPEYYHLYSERNFTYAGITQGNRNPLLYRNMGADGLKTGHTEAAGYGLTASVQRDGRRLILVVNGLKSMQQRADESARLLEWGFREFDNYTLAEAGEAFTEAEVWLGQKATVPLIAADKAVVTLPRRARENMEVKAVYEGPVAAPIRKGDQIAKLVVSVPDQAPIELPLYAGADVERLGFVGRIGAALQHVVFG 383
BLAST of mRNA_P-wetherbeei_contig1676.6.1 vs. uniprot
Match: A0A545TQK1_9PROT (Serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545TQK1_9PROT) HSP 1 Score: 315 bits (808), Expect = 1.490e-103 Identity = 154/277 (55.60%), Postives = 205/277 (74.01%), Query Frame = 1
Query: 1 GARIPVKDLLRGIIVQSGNDACVVVAEGLGGDEKNFARMMTERAREIGMTHSTFRNASGWPDPEHMMTARDLAVLAAYLVNTHKQYYSIFSEMDFTWHGIRQGNRNPLLYSYPGADGLKTGHTEEAGYGLTGSAERNGRRLIVVVTGLESDKRRGIEAERLLTLGFNDFETYTLLSAGQKLEDADVWLGEADKIPLVAGKDIRVTLPRAARKSMQAKLVYQAPLAAPVVKGAQVGAVTFTATGMQPVTVPVVAGEAVERLGFFGKIPAAFNYLLWGA 831
G +I V++LL+G+IVQSGNDAC+V+AEGL G E+ FA +MTE+AREIGMT STF NA+GWPDP H MTARDLA LA Y++ +YY +S+ +FTW I+Q NRNPLLY GADGLKTGHTEEAGYGLT SA ++ RRLI+VV GL S + R E+ RLL GF +F+ Y L SAG+ +E+A VWLGE + +PLV +D+ +TLPR AR SM+ + Y+ P++AP+ +GAQ+ + A ++ + +P+V G AV +LG FGKI A +L++GA
Sbjct: 105 GDQISVENLLQGVIVQSGNDACIVLAEGLAGTEEAFADVMTEKAREIGMTGSTFANATGWPDPNHRMTARDLATLANYVITEFPEYYHYYSQTEFTWSDIKQSNRNPLLYMNIGADGLKTGHTEEAGYGLTSSAVKDDRRLILVVNGLPSVRARSEESARLLQWGFREFDNYKLFSAGETVEEASVWLGEENTVPLVTAEDVLITLPRQARDSMRVTVTYEGPISAPIEEGAQLATLRVEAKDVETIEIPLVTGAAVGQLGGFGKITAGVKHLIFGA 381 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1676.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1676.6.1 >prot_P-wetherbeei_contig1676.6.1 ID=prot_P-wetherbeei_contig1676.6.1|Name=mRNA_P-wetherbeei_contig1676.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=281bp GARIPVKDLLRGIIVQSGNDACVVVAEGLGGDEKNFARMMTERAREIGMTback to top mRNA from alignment at P-wetherbeei_contig1676:5948..6790- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1676.6.1 ID=mRNA_P-wetherbeei_contig1676.6.1|Name=mRNA_P-wetherbeei_contig1676.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=843bp|location=Sequence derived from alignment at P-wetherbeei_contig1676:5948..6790- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1676:5948..6790- >mRNA_P-wetherbeei_contig1676.6.1 ID=mRNA_P-wetherbeei_contig1676.6.1|Name=mRNA_P-wetherbeei_contig1676.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=843bp|location=Sequence derived from alignment at P-wetherbeei_contig1676:5948..6790- (Phaeothamnion wetherbeei SAG_119_79)back to top |