mRNA_P-wetherbeei_contig1676.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1676.2.1
Unique NamemRNA_P-wetherbeei_contig1676.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: A0A3C0TRK3_9PROT (LuxR family transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TRK3_9PROT)

HSP 1 Score: 448 bits (1152), Expect = 7.410e-158
Identity = 216/256 (84.38%), Postives = 234/256 (91.41%), Query Frame = 1
Query:    4 MLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTKA 771
            MLVDSHCHLDFPDF+G+  +V+RRA +A IGMMLTICTRIS FERI  +A +FDHIYCSVGIHPHEADNEPA D +RI +LT HPKVIGIGETGLDY+YEHGSR AQK+SF AHIAA+RETGLPLIVHARDAD D I IL+DEAGKGAFPGVIHCFTAG ELARAALDLG+YISLSGIVTFKNAKDLRETA+MIP DRLLIETDAPFLAP+PHRGKRNEPAFVADTARYLAEFFGETRE FA+RTT+NFF LF KA
Sbjct:    1 MLVDSHCHLDFPDFNGDRKDVLRRAAMADIGMMLTICTRISVFERIRAIAEEFDHIYCSVGIHPHEADNEPAVDASRIAALTDHPKVIGIGETGLDYYYEHGSREAQKSSFGAHIAASRETGLPLIVHARDADEDMIAILRDEAGKGAFPGVIHCFTAGAELARAALDLGMYISLSGIVTFKNAKDLRETARMIPPDRLLIETDAPFLAPVPHRGKRNEPAFVADTARYLAEFFGETREEFASRTTENFFRLFRKA 256          
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: A0A3B9BMT5_9PROT (LuxR family transcriptional regulator n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3B9BMT5_9PROT)

HSP 1 Score: 371 bits (952), Expect = 2.180e-127
Identity = 174/258 (67.44%), Postives = 214/258 (82.95%), Query Frame = 1
Query:    4 MLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTKADR 777
            MLVDSHCHLDFP+F+ ++D VV RA  AG+G M+TICT +++F ++  VA +F +I+C+VGIHPHEA++EP  D A +++L G  KV+GIGETGLDY+Y++  RAAQ+ +FRAHIAAAR TGLPLIVH+RDAD DTI IL++EA KGAFPG+IHCFTAGPELARAA+DLGLYISLSGIVTFK+A DLRETA+ IP +RLL+ETDAPFLAP+P RGK NEPA+VA TA Y+AE  G    A A  TTDNFF LF++A R
Sbjct:    1 MLVDSHCHLDFPEFADDLDGVVARAEAAGVGTMVTICTHVTKFAQVQAVARRFPNIFCTVGIHPHEAESEPDTDAATLITLAGSDKVVGIGETGLDYYYDNAPRAAQRRAFRAHIAAARATGLPLIVHSRDADEDTIAILREEADKGAFPGLIHCFTAGPELARAAIDLGLYISLSGIVTFKSAADLRETARQIPHERLLVETDAPFLAPVPRRGKTNEPAYVAHTAAYVAEMLGMEPAALADLTTDNFFRLFSRAHR 258          
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: A0A3D4F3W2_9HYPH (LuxR family transcriptional regulator n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A3D4F3W2_9HYPH)

HSP 1 Score: 362 bits (929), Expect = 7.370e-124
Identity = 173/256 (67.58%), Postives = 205/256 (80.08%), Query Frame = 1
Query:    4 MLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTKA 771
            MLVDSHCHLDF DF  + ++VV RA  AGIG+M+TI T+I+E E+I  +A ++D + CSVGIHPHEA NEP      IV L+ HPKV+G+GETGLDYFYEH  R AQ+ +FRAHIAAARETGLPLIVHARDAD DT +IL+DE  KGAFPG+IHCFTAGPELA+ ALD+G YIS+SGI TFKNA+ LR+T +M+P DRLL+ETDAPFLAP+PHRGKRNEP+FVADTA  LA  F       A +TT NFF LF+KA
Sbjct:    1 MLVDSHCHLDFDDFDEDRNDVVARARAAGIGLMVTISTKITEAEKIIALAERYDDVVCSVGIHPHEAGNEPPTSADDIVRLSRHPKVVGVGETGLDYFYEHSPRDAQQRNFRAHIAAARETGLPLIVHARDADIDTADILEDEMAKGAFPGLIHCFTAGPELAQRALDIGFYISISGIATFKNAETLRQTIRMVPEDRLLVETDAPFLAPVPHRGKRNEPSFVADTATALATLFETDYATLANQTTQNFFRLFSKA 256          
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: K2K067_9PROT (TatD family hydrolase n=3 Tax=Oceanibaculum TaxID=659693 RepID=K2K067_9PROT)

HSP 1 Score: 359 bits (921), Expect = 1.090e-122
Identity = 167/255 (65.49%), Postives = 203/255 (79.61%), Query Frame = 1
Query:    4 MLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTK 768
            MLVDSHCHLDFPDF  E+D VV RA  AG+G M+TICT+I+EFER+  +A ++D IYC+VGIHPHEAD++P  D AR+V    HPKV+GIGETGLDYFYEH +R AQ+ SFRAHI A+RETGLPL+VH RDAD DT+ IL+DE G+G +PG+IHCF++   LA   L LGLYISLSGIVTFK A++LRET K +P DR+L+ETD+P+LAP+PHRGKRNEPAFVA TA+ +AE  G       ARTT+NF  LF K
Sbjct:    1 MLVDSHCHLDFPDFGEELDAVVARARAAGVGRMVTICTKITEFERVRAIAERYDDIYCTVGIHPHEADSQPEIDTARLVEAARHPKVVGIGETGLDYFYEHSARQAQQRSFRAHIQASRETGLPLVVHTRDADEDTVAILKDEIGQGDYPGLIHCFSSSAWLAEECLKLGLYISLSGIVTFKKAEELRETVKALPLDRILVETDSPYLAPVPHRGKRNEPAFVAHTAKVVAELKGVGMAEIEARTTENFLHLFNK 255          
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: A0A1G7Y824_9PROT (TatD DNase family protein n=1 Tax=Roseospirillum parvum TaxID=83401 RepID=A0A1G7Y824_9PROT)

HSP 1 Score: 358 bits (920), Expect = 1.670e-122
Identity = 166/259 (64.09%), Postives = 204/259 (78.76%), Query Frame = 1
Query:    1 PMLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTKADR 777
            P LVDSHCHLDFPDF+ E+D VV RAG AGIG MLTICT ++ F+++  +A +FD ++CSVGIHPHEA  EPA D AR++ L   PKV+G GETGL+YFYEH  RA Q+ +FRAHI AARETGLPLI+H+RDAD+D   IL++EAG+GAFPG++HCF++GPELA  AL+LGLY+S SGIVTF  A+ LRE AK +P +R+L+ETDAP+LAP+P RGKRNEPAF   TA  LAE  G      AA+TT+NFFTLF K  R
Sbjct:    5 PFLVDSHCHLDFPDFAEELDEVVARAGRAGIGTMLTICTHVTRFQQVRALAHRFDAVWCSVGIHPHEAGREPATDAARLIELADDPKVVGFGETGLEYFYEHSPRADQQRAFRAHIQAARETGLPLIIHSRDADADMAAILREEAGQGAFPGLVHCFSSGPELAETALELGLYLSFSGIVTFPKAEALREVAKTVPPERILVETDAPYLAPVPKRGKRNEPAFTVHTATRLAEVLGMEVADLAAQTTENFFTLFGKVQR 263          
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: A0A3B8XQ37_9HYPH (LuxR family transcriptional regulator n=5 Tax=Hyphomicrobiales TaxID=356 RepID=A0A3B8XQ37_9HYPH)

HSP 1 Score: 356 bits (914), Expect = 1.460e-121
Identity = 166/256 (64.84%), Postives = 205/256 (80.08%), Query Frame = 1
Query:    1 PMLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTK 768
            P+LVDSHCHLDFPDF  E+D VV RA  AG+G+M+TI T++SEF+++  VA +F H++CSVGIHPHEA++EP  D A++V L  HPKV+GIGETGLDY+YEH  R AQ+ +FRAHIAAARETGLPLIVH RDAD DT  IL +E GKGAFPG++HCF++ P+LA  A++LGLYISLSGI+TFKNA +LRETA  +P +RLL+ETDAP+LAP+P RGKRNEP+FV  TA  LAE  G   E  A  TT NF  LF++
Sbjct:    4 PVLVDSHCHLDFPDFGPEVDEVVARAHGAGVGLMVTISTKVSEFDKVRAVAERFPHVFCSVGIHPHEAESEPEIDTAKLVELAKHPKVVGIGETGLDYYYEHAPREAQQRNFRAHIAAARETGLPLIVHTRDADEDTARILDEEMGKGAFPGLLHCFSSSPQLAEKAVELGLYISLSGILTFKNAVELRETAAKVPMERLLVETDAPYLAPVPKRGKRNEPSFVVHTAAKLAEVKGVPVEQLAETTTANFLRLFSR 259          
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: A0A2N3EGM8_9PROT (LuxR family transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-11 TaxID=2013657 RepID=A0A2N3EGM8_9PROT)

HSP 1 Score: 355 bits (911), Expect = 3.630e-121
Identity = 164/255 (64.31%), Postives = 203/255 (79.61%), Query Frame = 1
Query:    4 MLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTK 768
            ML+DSHCHLDFPDF  E++ VV RA  AG+G+M+TI T++SEF+R+  VA +F H++C+VGIHPHEA +EP  D A +V +  HPKV+GIGETGLDY+YEH  RAAQ+ +FRAHIAAARETGLPL+VH RDAD DT +IL +E GKGAFPG++HCF++GP+LA  AL+LGLYISLSGI+TFK A +LR TA  +P DRLL+ETDAP+LAP+P RGKRNEPAFV  TA  LAE  G +    A  TT NF  LF++
Sbjct:    1 MLIDSHCHLDFPDFGPEVEEVVTRAHAAGVGLMVTISTKVSEFDRVRAVAERFPHVFCTVGIHPHEAASEPETDTATLVEMAKHPKVVGIGETGLDYYYEHSPRAAQQRNFRAHIAAARETGLPLVVHTRDADDDTAQILDEETGKGAFPGLLHCFSSGPQLAEKALELGLYISLSGILTFKTADELRATAAKVPLDRLLVETDAPYLAPVPKRGKRNEPAFVVHTAEKLAEVKGVSAAQLAEATTANFLRLFSR 255          
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: A0A2D4VN46_9HYPH (LuxR family transcriptional regulator n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VN46_9HYPH)

HSP 1 Score: 354 bits (908), Expect = 1.190e-120
Identity = 164/259 (63.32%), Postives = 205/259 (79.15%), Query Frame = 1
Query:    1 PMLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTKADR 777
            P+LVDSHCHLDFPDF+ E+D +V RA  AG+G+M+TI T+ISEFER+  VA +F H+YC+VGIHPHEA++EP    AR++ L  HPKV+GIGETGLD+FYEH  R AQ+T+FRAHIAA+RETGLPLIVH RDAD DT  IL +E  KGAFPG++HCF++  +LA  A+D G YISLSGI+TFK A++LRETA+ +P DRLL+ETDAP+LAP+P RGKRNEP+FV  TA  LAE  G +    A  TT+NF  LF++  R
Sbjct:    4 PVLVDSHCHLDFPDFAEEVDEIVNRAHEAGVGLMVTISTKISEFERVRAVAERFPHVYCTVGIHPHEAEDEPETSAARLIELAQHPKVVGIGETGLDFFYEHSPREAQETAFRAHIAASRETGLPLIVHTRDADEDTARILAEEMEKGAFPGLLHCFSSSRQLAEKAVDFGFYISLSGILTFKKAEELRETAEALPLDRLLVETDAPYLAPVPKRGKRNEPSFVVHTAAKLAEVKGVSGAELAEATTENFLKLFSRVPR 262          
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: A0A154W8C9_9PROT (LuxR family transcriptional regulator n=1 Tax=Oceanibaculum pacificum TaxID=580166 RepID=A0A154W8C9_9PROT)

HSP 1 Score: 353 bits (907), Expect = 1.470e-120
Identity = 162/262 (61.83%), Postives = 208/262 (79.39%), Query Frame = 1
Query:    4 MLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTKADRANAR 789
            MLVDSHCHLDFPDF+ E+D VV RA  AG+  M+TICT+I+EFER+  +A ++D IYC+VGIHPHEAD++P  D AR+V+   HPKV+GIGE+GLDYFYEH  R AQ+ SFRAHI AAR+TGLPL+VH RDAD+DT+ IL++E  +G FPG+IHCF++  ELA  +++LGLYISLSGIVTFK A +L+ET + +P DRLL+ETD+P+LAP+PHRGKRNEPAFVA TA+ +AE  G +       TT+NF  LF K +  +A+
Sbjct:    1 MLVDSHCHLDFPDFAEELDEVVERARKAGVARMVTICTKITEFERVRGIAERYDDIYCTVGIHPHEADSQPETDAARLVAAAQHPKVVGIGESGLDYFYEHSGRLAQQRSFRAHIKAARQTGLPLVVHTRDADADTVAILREEHAEGVFPGLIHCFSSSRELAEKSIELGLYISLSGIVTFKKAVELQETVRALPLDRLLVETDSPYLAPIPHRGKRNEPAFVAHTAKMVAELKGISMAEVEKATTENFARLFKKVEMPSAQ 262          
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Match: A7HXT8_PARL1 (Hydrolase, TatD family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) TaxID=402881 RepID=A7HXT8_PARL1)

HSP 1 Score: 351 bits (901), Expect = 1.390e-119
Identity = 163/256 (63.67%), Postives = 202/256 (78.91%), Query Frame = 1
Query:    1 PMLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVAGKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYEHGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFPGVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLLIETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFFTLFTK 768
            P+L+DSHCHLDFPDF  E++ VV RA  AG+G+M+TI T++SEF+R+  VA +F H+YC+VGIHPHEA +EP  D A ++ +  HPKV+GIGETGLDY+YEH  R AQK +FR+HIAAARETGLPLIVH RDAD D  +IL +E GKGAFPG++HCF++ P+LA  AL LGLYISLSGIVTFK+A++LR TA  +P DRLL+ETDAP+LAP+P RGKRNEPAFV  TA  +AE      E  AA TT NF  LF++
Sbjct:    4 PVLIDSHCHLDFPDFGAEVEEVVARAHEAGVGLMVTISTKVSEFDRVRAVAERFPHVYCTVGIHPHEAASEPETDKATLIEMAKHPKVVGIGETGLDYYYEHSPREAQKRNFRSHIAAARETGLPLIVHTRDADEDMAQILDEETGKGAFPGLLHCFSSSPQLAEKALALGLYISLSGIVTFKSAEELRATAATVPMDRLLVETDAPYLAPVPKRGKRNEPAFVVHTAAKVAEIKAVPVEELAAATTANFLRLFSR 259          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1676.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TRK3_9PROT7.410e-15884.38LuxR family transcriptional regulator n=1 Tax=Alph... [more]
A0A3B9BMT5_9PROT2.180e-12767.44LuxR family transcriptional regulator n=3 Tax=Alph... [more]
A0A3D4F3W2_9HYPH7.370e-12467.58LuxR family transcriptional regulator n=1 Tax=Rhod... [more]
K2K067_9PROT1.090e-12265.49TatD family hydrolase n=3 Tax=Oceanibaculum TaxID=... [more]
A0A1G7Y824_9PROT1.670e-12264.09TatD DNase family protein n=1 Tax=Roseospirillum p... [more]
A0A3B8XQ37_9HYPH1.460e-12164.84LuxR family transcriptional regulator n=5 Tax=Hyph... [more]
A0A2N3EGM8_9PROT3.630e-12164.31LuxR family transcriptional regulator n=1 Tax=Alph... [more]
A0A2D4VN46_9HYPH1.190e-12063.32LuxR family transcriptional regulator n=2 Tax=Parv... [more]
A0A154W8C9_9PROT1.470e-12061.83LuxR family transcriptional regulator n=1 Tax=Ocea... [more]
A7HXT8_PARL11.390e-11963.67Hydrolase, TatD family n=1 Tax=Parvibaculum lavame... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1676contigP-wetherbeei_contig1676:1776..2570 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1207063.P24_15319
PFAMsTatD_DNase
Model size795
Max annot lvl204441|Rhodospirillales
KEGG koko:K03424
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.73e-123
EggNOG OGsCOG0084@1|root,COG0084@2|Bacteria,1MUC0@1224|Proteobacteria,2TS88@28211|Alphaproteobacteria,2JR2C@204441|Rhodospirillales
DescriptionTatD related DNase
Cds size792
COG categoryL
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186096.608334-CDS-P-wetherbeei_contig1676:1775..25671683186096.608334-CDS-P-wetherbeei_contig1676:1775..2567Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1676 1776..2567 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186096.6174028-UTR-P-wetherbeei_contig1676:2567..25701683186096.6174028-UTR-P-wetherbeei_contig1676:2567..2570Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1676 2568..2570 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1676.2.1prot_P-wetherbeei_contig1676.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1676 1776..2567 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1676.2.1

>prot_P-wetherbeei_contig1676.2.1 ID=prot_P-wetherbeei_contig1676.2.1|Name=mRNA_P-wetherbeei_contig1676.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=264bp
MLVDSHCHLDFPDFSGEMDNVVRRAGLAGIGMMLTICTRISEFERISDVA
GKFDHIYCSVGIHPHEADNEPAADCARIVSLTGHPKVIGIGETGLDYFYE
HGSRAAQKTSFRAHIAAARETGLPLIVHARDADSDTIEILQDEAGKGAFP
GVIHCFTAGPELARAALDLGLYISLSGIVTFKNAKDLRETAKMIPSDRLL
IETDAPFLAPMPHRGKRNEPAFVADTARYLAEFFGETREAFAARTTDNFF
TLFTKADRANART*
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mRNA from alignment at P-wetherbeei_contig1676:1776..2570-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1676.2.1 ID=mRNA_P-wetherbeei_contig1676.2.1|Name=mRNA_P-wetherbeei_contig1676.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=795bp|location=Sequence derived from alignment at P-wetherbeei_contig1676:1776..2570- (Phaeothamnion wetherbeei SAG_119_79)
CCGATGCTGGTCGATAGCCATTGTCATCTTGATTTTCCTGATTTTTCCGG GGAAATGGACAATGTGGTACGCCGCGCGGGCCTGGCGGGCATTGGCATGA TGCTGACCATCTGTACACGGATCAGTGAATTTGAGCGCATCAGCGACGTC GCTGGTAAATTCGATCATATTTATTGTTCCGTCGGCATTCATCCGCATGA GGCGGATAATGAACCCGCCGCCGATTGCGCGCGGATCGTTTCATTGACCG GGCATCCCAAGGTGATCGGAATTGGTGAAACCGGGCTGGATTATTTTTAT GAACATGGTTCGCGCGCGGCGCAGAAAACATCCTTCCGCGCACATATTGC AGCGGCGCGTGAAACAGGCCTGCCGCTGATTGTCCATGCCCGCGACGCAG ATAGCGACACTATTGAAATTCTGCAGGATGAAGCGGGGAAGGGGGCCTTT CCCGGCGTCATTCACTGTTTTACGGCGGGGCCGGAACTGGCGCGCGCGGC CCTTGATCTGGGCCTGTATATTTCATTGTCTGGTATTGTGACTTTCAAAA ACGCCAAAGATTTGCGTGAAACCGCAAAGATGATTCCGTCTGACCGTCTG CTGATCGAAACCGATGCACCATTTCTGGCGCCCATGCCGCATCGGGGTAA GCGCAATGAACCGGCCTTTGTGGCGGACACGGCACGCTATCTGGCGGAGT TTTTTGGCGAGACGCGCGAGGCTTTCGCCGCCCGCACCACGGATAATTTT TTCACACTGTTCACCAAAGCGGACCGCGCCAATGCCCGGACATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1676:1776..2570-

>mRNA_P-wetherbeei_contig1676.2.1 ID=mRNA_P-wetherbeei_contig1676.2.1|Name=mRNA_P-wetherbeei_contig1676.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=792bp|location=Sequence derived from alignment at P-wetherbeei_contig1676:1776..2570- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGGTCGATAGCCATTGTCATCTTGATTTTCCTGATTTTTCCGGGGA
AATGGACAATGTGGTACGCCGCGCGGGCCTGGCGGGCATTGGCATGATGC
TGACCATCTGTACACGGATCAGTGAATTTGAGCGCATCAGCGACGTCGCT
GGTAAATTCGATCATATTTATTGTTCCGTCGGCATTCATCCGCATGAGGC
GGATAATGAACCCGCCGCCGATTGCGCGCGGATCGTTTCATTGACCGGGC
ATCCCAAGGTGATCGGAATTGGTGAAACCGGGCTGGATTATTTTTATGAA
CATGGTTCGCGCGCGGCGCAGAAAACATCCTTCCGCGCACATATTGCAGC
GGCGCGTGAAACAGGCCTGCCGCTGATTGTCCATGCCCGCGACGCAGATA
GCGACACTATTGAAATTCTGCAGGATGAAGCGGGGAAGGGGGCCTTTCCC
GGCGTCATTCACTGTTTTACGGCGGGGCCGGAACTGGCGCGCGCGGCCCT
TGATCTGGGCCTGTATATTTCATTGTCTGGTATTGTGACTTTCAAAAACG
CCAAAGATTTGCGTGAAACCGCAAAGATGATTCCGTCTGACCGTCTGCTG
ATCGAAACCGATGCACCATTTCTGGCGCCCATGCCGCATCGGGGTAAGCG
CAATGAACCGGCCTTTGTGGCGGACACGGCACGCTATCTGGCGGAGTTTT
TTGGCGAGACGCGCGAGGCTTTCGCCGCCCGCACCACGGATAATTTTTTC
ACACTGTTCACCAAAGCGGACCGCGCCAATGCCCGGACATAA
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