prot_P-wetherbeei_contig16758.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig16758.1.1
Unique Name	prot_P-wetherbeei_contig16758.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	94

Homology

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BLAST of mRNA_P-wetherbeei_contig16758.1.1 vs. uniprot
Match: A0A7C1TI88_9GAMM (Protein Smg homolog n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1TI88_9GAMM)

HSP 1 Score: 116 bits (291), Expect = 2.510e-31
Identity = 51/94 (54.26%), Postives = 76/94 (80.85%), Query Frame = 0

Query:    1 MKQTVIDILIYLFEHFVDDDLELETDRDRLKSELRDAGFDAGQVSKAFDWLQELAISRADSDGLPVAAYTSTRIYTLEEERKLDAECRGFMYFL 94
            MK+ V+D+L+YLFE++++DD+E++TD + L++EL+ AGF AG++SKAFDWL+ LA  ++  DGL ++A  S R+YT +E  KLDAECRGF+ FL
Sbjct:    1 MKENVLDVLMYLFENYMNDDIEIDTDEESLRAELQQAGFQAGEISKAFDWLEALARQQSQPDGLALSAVASMRVYTDDEMEKLDAECRGFLLFL 94

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BLAST of mRNA_P-wetherbeei_contig16758.1.1 vs. uniprot
Match: A0A523NP86_9PROT (Protein Smg homolog n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NP86_9PROT)

HSP 1 Score: 115 bits (287), Expect = 1.010e-30
Identity = 57/94 (60.64%), Postives = 72/94 (76.60%), Query Frame = 0

Query:    1 MKQTVIDILIYLFEHFVDDDLELETDRDRLKSELRDAGFDAGQVSKAFDWLQELAISRADSDGLPVAAYTSTRIYTLEEERKLDAECRGFMYFL 94
            MKQTVIDILIYLFEH+  D++EL+ D+DR+KSEL DAGF   +++KAFDWLQ+LA +   S      + TS RIY+  EE KLDAECRGF++FL
Sbjct:    1 MKQTVIDILIYLFEHYDSDEIELDVDQDRVKSELSDAGFGGTEITKAFDWLQDLATTSELSVDTIAESATSVRIYSYAEEVKLDAECRGFIHFL 94

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BLAST of mRNA_P-wetherbeei_contig16758.1.1 vs. uniprot
Match: A0A661BL32_9GAMM (Protein Smg homolog n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BL32_9GAMM)

HSP 1 Score: 99.4 bits (246), Expect = 1.630e-24
Identity = 48/94 (51.06%), Postives = 64/94 (68.09%), Query Frame = 0

Query:    1 MKQTVIDILIYLFEHFVDDDLELETDRDRLKSELRDAGFDAGQVSKAFDWLQELAISRADSDGLPVAAYTSTRIYTLEEERKLDAECRGFMYFL 94
            MK+TV+D+LIYLFE++ D+D ELE+D+  ++ EL +AGF   ++SKAF WL+ LA     S         STRIY  EE  +LD ECRGF+YFL
Sbjct:    1 MKETVLDVLIYLFENYFDEDSELESDQGTVRRELLEAGFPEAEISKAFGWLEGLAAGNEGSVSDSAKVRASTRIYAAEETGRLDLECRGFLYFL 94

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BLAST of mRNA_P-wetherbeei_contig16758.1.1 vs. uniprot
Match: A0A7C1TMZ0_9GAMM (Protein Smg homolog n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C1TMZ0_9GAMM)

HSP 1 Score: 96.3 bits (238), Expect = 2.630e-23
Identity = 44/94 (46.81%), Postives = 68/94 (72.34%), Query Frame = 0

Query:    1 MKQTVIDILIYLFEHFVDDDLELETDRDRLKSELRDAGFDAGQVSKAFDWLQELAISRADSDGLPVAAYTSTRIYTLEEERKLDAECRGFMYFL 94
            MK+ V+D+L+YLFE++++D++E++TD + L+ EL++AGF A ++SKAFDWL+ LA  +    GL      S R+YT  E+ KLD + RGF+ FL
Sbjct:    1 MKENVLDVLMYLFENYMNDEIEIDTDEESLRVELQEAGFQALEISKAFDWLEGLANLQESQPGLAPVNAASIRLYTAAEQEKLDRQSRGFILFL 94

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BLAST of mRNA_P-wetherbeei_contig16758.1.1 vs. uniprot
Match: A0A6N1DT76_9GAMM (Protein Smg homolog n=1 Tax=Ectothiorhodospiraceae bacterium 2226 TaxID=2740164 RepID=A0A6N1DT76_9GAMM)

HSP 1 Score: 96.3 bits (238), Expect = 2.700e-23
Identity = 45/95 (47.37%), Postives = 69/95 (72.63%), Query Frame = 0

Query:    1 MKQTVIDILIYLFEHFVDDDLELETDRDRLKSELRDAGFDAGQVSKAFDWLQELA-ISRADSDGLPVAAYTSTRIYTLEEERKLDAECRGFMYFL 94
            MK+ V+D+L+YLFE+++ DD+E + D+D L+ EL +AGF  G+++KAF WL+ LA ++    +G   A  T+TR+Y  +E  KLDA+CRGF+ FL
Sbjct:    1 MKENVLDLLMYLFENYMSDDVEFDPDQDALRVELLEAGFHQGEITKAFKWLEGLASLNDGSIEGRAPATTTATRVYARQECEKLDADCRGFLMFL 95

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BLAST of mRNA_P-wetherbeei_contig16758.1.1 vs. uniprot
Match: A0A7K4DZT6_9EURY (DUF494 domain-containing protein n=1 Tax=Halobacteria archaeon TaxID=2670410 RepID=A0A7K4DZT6_9EURY)

HSP 1 Score: 95.5 bits (236), Expect = 5.270e-23
Identity = 44/94 (46.81%), Postives = 67/94 (71.28%), Query Frame = 0

Query:    1 MKQTVIDILIYLFEHFVDDDLELETDRDRLKSELRDAGFDAGQVSKAFDWLQELAISRADSDGLPVAAYTSTRIYTLEEERKLDAECRGFMYFL 94
            MK+ V+D+L+YLFE++++D++E +TD + LK EL++AGF   +++KAFDWL+ LA  +   D       TS R+YT EE+ KLD + RGF+ FL
Sbjct:    1 MKENVLDVLMYLFENYMNDEIEFDTDEESLKVELQEAGFQQIEIAKAFDWLEGLANLQGHPDXXXXXXXTSLRLYTSEEQDKLDLDSRGFLMFL 94

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BLAST of mRNA_P-wetherbeei_contig16758.1.1 vs. uniprot
Match: A0A0F3IJZ8_9GAMM (Protein Smg homolog n=1 Tax=Methylocucumis oryzae TaxID=1632867 RepID=A0A0F3IJZ8_9GAMM)

HSP 1 Score: 95.1 bits (235), Expect = 6.730e-23
Identity = 44/94 (46.81%), Postives = 71/94 (75.53%), Query Frame = 0

Query:    1 MKQTVIDILIYLFEHFVDDDLELETDRDRLKSELRDAGFDAGQVSKAFDWLQELAISRADSDGLPVAAYTSTRIYTLEEERKLDAECRGFMYFL 94
            MK+ + D+L+YLFE++++D++++  D D +KSEL +AGF++G+V+KAFDWL+ L+  RA +  +P     S RI+++EE+ KLD EC GF+ FL
Sbjct:    1 MKENIFDVLMYLFENYMEDEVDMLPDSDVIKSELEEAGFNSGEVNKAFDWLESLSWQRAITTTVP----NSFRIFSVEEKSKLDVECCGFIMFL 90

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BLAST of mRNA_P-wetherbeei_contig16758.1.1 vs. uniprot
Match: A0A661BTZ4_9GAMM (Protein Smg homolog n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BTZ4_9GAMM)

HSP 1 Score: 95.1 bits (235), Expect = 7.470e-23
Identity = 45/94 (47.87%), Postives = 67/94 (71.28%), Query Frame = 0

Query:    1 MKQTVIDILIYLFEHFVDDDLELETDRDRLKSELRDAGFDAGQVSKAFDWLQELAISRADSDGLPVAAYTSTRIYTLEEERKLDAECRGFMYFL 94
            MK+TV+D+L+YLF+++ D+D++L  D+D L+ +L DAGF   +V KAFDWL+ELA  + +    P    +++RIY  +E  KLD ECRGF+ FL
Sbjct:    1 MKETVLDVLMYLFDNYEDEDVKLTPDQDALRDQLLDAGFAEREVGKAFDWLEELATQKDNHYPSPDTGTSASRIYHGKELEKLDTECRGFLLFL 94

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BLAST of mRNA_P-wetherbeei_contig16758.1.1 vs. uniprot
Match: A0A1G0K745_9GAMM (Protein Smg homolog n=2 Tax=unclassified Gammaproteobacteria TaxID=33811 RepID=A0A1G0K745_9GAMM)

HSP 1 Score: 94.7 bits (234), Expect = 1.060e-22
Identity = 49/95 (51.58%), Postives = 70/95 (73.68%), Query Frame = 0

Query:    1 MKQTVIDILIYLFEHFVDDDLELETDRDRLKSELRDAGFDAGQVSKAFDWLQELAISRADSDGLP-VAAYTSTRIYTLEEERKLDAECRGFMYFL 94
            MK++VID+L+YLF+++ ++D E+ TD+D LK EL++AGF  GQV+KAFDWL+ LA  + D  GL  +    + RI+  EE +KLD ECRGF+ FL
Sbjct:    1 MKESVIDVLMYLFDNYFEEDNEISTDQDSLKFELKNAGFGDGQVNKAFDWLEGLARCK-DLIGLDTLRGRKALRIFNTEEMKKLDTECRGFILFL 94

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BLAST of mRNA_P-wetherbeei_contig16758.1.1 vs. uniprot
Match: H1G0C5_9GAMM (Protein Smg homolog n=4 Tax=Ectothiorhodospira TaxID=1051 RepID=H1G0C5_9GAMM)

HSP 1 Score: 94.4 bits (233), Expect = 1.350e-22
Identity = 46/94 (48.94%), Postives = 65/94 (69.15%), Query Frame = 0

Query:    1 MKQTVIDILIYLFEHFVDDDLELETDRDRLKSELRDAGFDAGQVSKAFDWLQELAISRADSDGLPVAAYTSTRIYTLEEERKLDAECRGFMYFL 94
            MK+ V+D+L+YLFE+++DDD ELE DR++L+  L DAGF   ++ KAFDWL+ LA      D   V A ++ R+YT  E  ++DAE RGF+ FL
Sbjct:    1 MKENVLDVLMYLFENYIDDDTELEPDREQLQDLLLDAGFPVAEIHKAFDWLENLAAQ----DSQTVHAGSALRVYTKAEMNRMDAESRGFLLFL 90

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig16758.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig16758.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7C1TI88_9GAMM	2.510e-31	54.26	Protein Smg homolog n=1 Tax=Gammaproteobacteria ba...	[more]
A0A523NP86_9PROT	1.010e-30	60.64	Protein Smg homolog n=2 Tax=Proteobacteria bacteri...	[more]
A0A661BL32_9GAMM	1.630e-24	51.06	Protein Smg homolog n=1 Tax=Gammaproteobacteria ba...	[more]
A0A7C1TMZ0_9GAMM	2.630e-23	46.81	Protein Smg homolog n=1 Tax=Gammaproteobacteria ba...	[more]
A0A6N1DT76_9GAMM	2.700e-23	47.37	Protein Smg homolog n=1 Tax=Ectothiorhodospiraceae...	[more]
A0A7K4DZT6_9EURY	5.270e-23	46.81	DUF494 domain-containing protein n=1 Tax=Halobacte...	[more]
A0A0F3IJZ8_9GAMM	6.730e-23	46.81	Protein Smg homolog n=1 Tax=Methylocucumis oryzae ...	[more]
A0A661BTZ4_9GAMM	7.470e-23	47.87	Protein Smg homolog n=2 Tax=Gammaproteobacteria ba...	[more]
A0A1G0K745_9GAMM	1.060e-22	51.58	Protein Smg homolog n=2 Tax=unclassified Gammaprot...	[more]
H1G0C5_9GAMM	1.350e-22	48.94	Protein Smg homolog n=4 Tax=Ectothiorhodospira Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007456	Smg	PFAM	PF04361	DUF494	coord: 5..94 e-value: 6.2E-25 score: 87.8
IPR007456	Smg	PANTHER	PTHR38692	PROTEIN SMG	coord: 5..94

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig16758	contig	P-wetherbeei_contig16758:2..283 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig16758.1.1	mRNA_P-wetherbeei_contig16758.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig16758 2..283 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig16758.1.1 ID=prot_P-wetherbeei_contig16758.1.1|Name=mRNA_P-wetherbeei_contig16758.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=94bp
MKQTVIDILIYLFEHFVDDDLELETDRDRLKSELRDAGFDAGQVSKAFDW
LQELAISRADSDGLPVAAYTSTRIYTLEEERKLDAECRGFMYFL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007456	Smg