mRNA_P-wetherbeei_contig16751.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16751.1.1
Unique NamemRNA_P-wetherbeei_contig16751.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16751.1.1 vs. uniprot
Match: A0A6L9KQR8_9BURK (Acyl--CoA ligase n=1 Tax=Rhodoferax sp. TaxID=50421 RepID=A0A6L9KQR8_9BURK)

HSP 1 Score: 719 bits (1856), Expect = 1.160e-257
Identity = 352/444 (79.28%), Postives = 387/444 (87.16%), Query Frame = 1
Query:    1 MDRTACALQRDGVRPGDAIAICAGTSIDYTALFLGALRAGVTVAPLAPGSGTGSLLRMMQDAQVKLVFADAHGGESLGPAGTDAVARIALDNTAIGRPLGHWLADAGQQPAPVAVRPDWPFNIIYSSGTTGEPKGIVQSHGMRWSHVRRAATYHYDTQTVTLLSTPLYSNTTLVVLFPTLSFGGTVVLMPKFDASGYLALAQAQRVTHTMLVPVQYQRLMAHPDFDRFDLSSFLVKFSTSAPFNAAIKADVLRRWPGELVEFYGMTEGGGTCILEAHAHPEKLHTVGRPAEGHDIRLIDDNGAEVGPGESGEVVGHSGGMMTGYHGQPDKTREAEWFDPQGKRFIRTGDIGRFDADGFLTLFDRKKDMLISGGFNVYPSDLEAVLRKHSCVLEAAVVGVPSEKWGETPAAFVVLQPGQRMSADELLDWTNGQVGKTSAWVTCNF 1332
            +DRTACALQRDG  PG AIAICA  SI+Y A+FLGALRAGV VAPLAPGSG+ SL RM++DA  +L+F D  GG  LG A    VARIALDN    R L +WLA+ GQQP  VAV  DWPFNIIYSSGTTGEPKGIVQSHGMRW+HVRR A YHYDT+TVTLLSTPLYSNTTLVV FPTLSFGGTV+LMPKFDA GYL LA+  R+THTMLVPVQYQRLMAHP+FDRFDLSS+ VKFSTSAPF+AA+KADVL+RWPG LVEFYGMTEGGGTCIL+AHAHPEKLHTVGR AEGHDIRLIDD+G EVG GE+GEVVGHSGGMM GYHGQP+KTREAEWFDP GKRFIRTGDIGRFDADGFLTLFDRKKDMLISGGFNVYPSDLE VLR+HS VLEAAVVGVPS++WGETPAAFVVL+PGQ ++ +ELL+W+N Q+GKT    +  F
Sbjct:   45 VDRTACALQRDGFLPGHAIAICADMSIEYAAVFLGALRAGVVVAPLAPGSGSTSLRRMVKDADARLIFVDGPGGVVLGQAHVHGVARIALDNQTSERSLENWLAEPGQQPVSVAVEADWPFNIIYSSGTTGEPKGIVQSHGMRWTHVRRGAAYHYDTKTVTLLSTPLYSNTTLVVFFPTLSFGGTVILMPKFDALGYLVLAKIHRITHTMLVPVQYQRLMAHPEFDRFDLSSYQVKFSTSAPFDAAVKADVLKRWPGGLVEFYGMTEGGGTCILDAHAHPEKLHTVGRAAEGHDIRLIDDDGMEVGVGEAGEVVGHSGGMMIGYHGQPEKTREAEWFDPHGKRFIRTGDIGRFDADGFLTLFDRKKDMLISGGFNVYPSDLEDVLRRHSSVLEAAVVGVPSKQWGETPAAFVVLKPGQAVTTEELLEWSNCQLGKTQRICSLQF 488          
BLAST of mRNA_P-wetherbeei_contig16751.1.1 vs. uniprot
Match: A0A0Q7CMN6_9BURK (4-coumarate--CoA ligase n=23 Tax=Bacteria TaxID=2 RepID=A0A0Q7CMN6_9BURK)

HSP 1 Score: 652 bits (1682), Expect = 4.160e-231
Identity = 318/447 (71.14%), Postives = 364/447 (81.43%), Query Frame = 1
Query:    1 MDRTACALQRDGVRPGDAIAICAGTSIDYTALFLGALRAGVTVAPLAPGSGTGSLLRMMQDAQVKLVFADAHGGESLGPAGTDAVARIALDNTAIGRPLGHWLADAGQQPAPVAVRPDWPFNIIYSSGTTGEPKGIVQSHGMRWSHVRRAATYHYDTQTVTLLSTPLYSNTTLVVLFPTLSFGGTVVLMPKFDASGYLALAQAQRVTHTMLVPVQYQRLMAHPDFDRFDLSSFLVKFSTSAPFNAAIKADVLRRWPGELVEFYGMTEGGGTCILEAHAHPEKLHTVGRPAEGHDIRLIDDNGAEVGPGES---GEVVGHSGGMMTGYHGQPDKTREAEWFDPQGKRFIRTGDIGRFDADGFLTLFDRKKDMLISGGFNVYPSDLEAVLRKHSCVLEAAVVGVPSEKWGETPAAFVVLQPGQRMSADELLDWTNGQVGKTSAWVTCNF 1332
            MDR A  LQRDG++PGDAIAICA +S++Y A+FLGALRAGV VAPLAPGS   SL RM++DA  +++F+DA   E +GPA   ++ARIALD + +GR +  WLA AG QP  V  +P WPFNIIYSSGTTGEPKGIVQ HGMRW+HV+R A Y Y   TVTLLSTPLYSNTTLVV FPT++FGG VVLMPKFDA GYL LA+ +RVTHTMLVPVQYQRLMAHP FD  DLSSF  KFSTSAPFNAA+KADVL+RWPG L+EFYGMTEGGGTCILEAH +P KLHTVG+PAEG DIRLID+ G E+  G +   GEVVGHSGGMMTGYH QP+KTREAEWFD  GKRFIRTGD+GRFDA+GFLTLFDRKKDM+ISGGFN+YPSDLEAVLR H+ V + AV+GVPSE+WGETP AFVV + G   + D LL WTN Q+GKT      +F
Sbjct:   53 MDRVAAGLQRDGLQPGDAIAICASSSVNYAAVFLGALRAGVAVAPLAPGSTPASLARMIEDADARILFSDASAAEVIGPAKQGSIARIALDGSNVGRDIESWLAPAGAQPKAVETQPSWPFNIIYSSGTTGEPKGIVQGHGMRWAHVQRGAKYEYSPDTVTLLSTPLYSNTTLVVFFPTIAFGGCVVLMPKFDALGYLQLAEQRRVTHTMLVPVQYQRLMAHPRFDAHDLSSFRFKFSTSAPFNAALKADVLKRWPGGLIEFYGMTEGGGTCILEAHLNPTKLHTVGQPAEGSDIRLIDEEGNELPRGNTEVAGEVVGHSGGMMTGYHRQPEKTREAEWFDATGKRFIRTGDVGRFDAEGFLTLFDRKKDMIISGGFNIYPSDLEAVLRGHAAVADVAVIGVPSEQWGETPVAFVVRREGDSTTEDVLLQWTNAQLGKTQRLARLSF 499          
BLAST of mRNA_P-wetherbeei_contig16751.1.1 vs. uniprot
Match: A0A2N2RQT8_9PROT (4-coumarate--CoA ligase n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-3 TaxID=2013715 RepID=A0A2N2RQT8_9PROT)

HSP 1 Score: 651 bits (1680), Expect = 6.060e-231
Identity = 322/436 (73.85%), Postives = 357/436 (81.88%), Query Frame = 1
Query:    1 MDRTACALQRDGVRPGDAIAICAGTSIDYTALFLGALRAGVTVAPLAPGSGTGSLLRMMQDAQVKLVFADAHGGESLGPAGTDAVARIALDNTAIGRPLGHWLADAGQQPAPVAVRPDWPFNIIYSSGTTGEPKGIVQSHGMRWSHVRRAATYHYDTQTVTLLSTPLYSNTTLVVLFPTLSFGGTVVLMPKFDASGYLALAQAQRVTHTMLVPVQYQRLMAHPDFDRFDLSSFLVKFSTSAPFNAAIKADVLRRWPGELVEFYGMTEGGGTCILEAHAHPEKLHTVGRPAEGHDIRLIDDNGAEVGPGESGEVVGHSGGMMTGYHGQPDKTREAEWFDPQGKRFIRTGDIGRFDADGFLTLFDRKKDMLISGGFNVYPSDLEAVLRKHSCVLEAAVVGVPSEKWGETPAAFVVLQPGQRMSADELLDWTNGQVGKT 1308
            MDR A ALQRDG+RPGDA+A+CA +S  Y A+FLGALRAGV VAPLAPG+   SL RM  DAQ +L+F DA   ++LG   T  + R+ LD +A GR L  WLA      APVAV P  PFNIIYSSGTTGEPKGIVQSHGMRW+HVRR A Y Y + TVTLLSTPLYSNTTLVV FPTL+FGGTV LMPKFDA  YL LAQ  RVTHTMLVPVQYQRLMA P+FDRFDLSSF +KFSTSAPF A +KADVL RWPG LVEFYGMTEGGGTCIL+AH HP+KLHTVGRPAEGHDIRLID+ G E+ PGE+GEVVGHSGGMMTGY G+P++TREAEWFDP GKRFIRTGD+GRFDADGFLTL DR+KDM+ISGGFN+YPSDLEAVLR+H  VLEAAVVGVPSE WGETP AFVV +       DEL+ W N +VGKT
Sbjct:   45 MDRVASALQRDGLRPGDAVALCASSSTIYAAVFLGALRAGVVVAPLAPGATPQSLARMAADAQARLLFTDAGTSQTLGITATPGIPRVTLDGSAAGRALADWLAPKPAGVAPVAVGPAAPFNIIYSSGTTGEPKGIVQSHGMRWTHVRRGAAYGYGSDTVTLLSTPLYSNTTLVVFFPTLAFGGTVRLMPKFDALAYLTLAQLHRVTHTMLVPVQYQRLMAQPEFDRFDLSSFHMKFSTSAPFGAPLKADVLARWPGGLVEFYGMTEGGGTCILDAHVHPDKLHTVGRPAEGHDIRLIDEAGQELPPGETGEVVGHSGGMMTGYFGRPEQTREAEWFDPAGKRFIRTGDVGRFDADGFLTLLDRRKDMIISGGFNIYPSDLEAVLREHPAVLEAAVVGVPSEAWGETPLAFVVRRASHAAEPDELMAWVNARVGKT 480          
BLAST of mRNA_P-wetherbeei_contig16751.1.1 vs. uniprot
Match: A0A1V6F4P4_9PROT (Long-chain-fatty-acid--CoA ligase n=1 Tax=Alphaproteobacteria bacterium ADurb.Bin100 TaxID=1852791 RepID=A0A1V6F4P4_9PROT)

HSP 1 Score: 649 bits (1675), Expect = 5.180e-230
Identity = 321/436 (73.62%), Postives = 360/436 (82.57%), Query Frame = 1
Query:    1 MDRTACALQRDGVRPGDAIAICAGTSIDYTALFLGALRAGVTVAPLAPGSGTGSLLRMMQDAQVKLVFADAHGGESLGPAGTDAVARIALDNTAIGRPLGHWLADAGQQPAPVAVRPDWPFNIIYSSGTTGEPKGIVQSHGMRWSHVRRAATYHYDTQTVTLLSTPLYSNTTLVVLFPTLSFGGTVVLMPKFDASGYLALAQAQRVTHTMLVPVQYQRLMAHPDFDRFDLSSFLVKFSTSAPFNAAIKADVLRRWPGELVEFYGMTEGGGTCILEAHAHPEKLHTVGRPAEGHDIRLIDDNGAEVGPGESGEVVGHSGGMMTGYHGQPDKTREAEWFDPQGKRFIRTGDIGRFDADGFLTLFDRKKDMLISGGFNVYPSDLEAVLRKHSCVLEAAVVGVPSEKWGETPAAFVVLQPGQRMSADELLDWTNGQVGKT 1308
            MDR A  LQRDG++ GDAIAIC+ +SIDY A+FLGALRAG+ VAPLAPGS   SL RM+ DA  +L+F DA   E++G AG   V  IALD +A G+PL  WLA  G QP PVA++P   FNIIYSSGTTG PKGIVQSHGMRW+HV R ATY Y   TVTLLSTPLYSNTTLVV FPTL+FGGTV+LMPKFDA+ YL LA+  RVTHTMLVPVQYQRLMA PDFD  DLS F +KFSTSAPFNAA+KADVL+RWPG LVEFYG+TEGGGT ILEAH HP+KLHTVGRPAEGHD+RLID+ G EV  GE+GEVVGHSGGMMTGYHGQP+KTREAEWF P GKRFIRTGD+GRFDADGFLTLFDRKKD++ISGGFN+YPSDLEA L +H  V EAAVVGVPS +WGETP AFVV + G  +SA+ L DW N +VGKT
Sbjct:   56 MDRVAATLQRDGLQSGDAIAICSTSSIDYAAVFLGALRAGIVVAPLAPGSTPDSLARMLADAGARLLFTDAAAAETVGEAGAGKVPHIALDGSAAGQPLESWLAAPGAQPTPVALQPAQAFNIIYSSGTTGAPKGIVQSHGMRWAHVTRGATYGYGPDTVTLLSTPLYSNTTLVVFFPTLAFGGTVLLMPKFDAAAYLRLAEIHRVTHTMLVPVQYQRLMARPDFDVHDLSGFRMKFSTSAPFNAALKADVLKRWPGGLVEFYGLTEGGGTFILEAHNHPDKLHTVGRPAEGHDLRLIDEAGVEVPSGEAGEVVGHSGGMMTGYHGQPEKTREAEWFAPDGKRFIRTGDVGRFDADGFLTLFDRKKDLIISGGFNIYPSDLEAQLVEHPAVGEAAVVGVPSPEWGETPVAFVVARDGHPVSAEALKDWLNARVGKT 491          
BLAST of mRNA_P-wetherbeei_contig16751.1.1 vs. uniprot
Match: A0A126ZG54_9BURK (4-coumarate--CoA ligase n=2 Tax=Variovorax sp. PAMC 28711 TaxID=1795631 RepID=A0A126ZG54_9BURK)

HSP 1 Score: 649 bits (1674), Expect = 5.320e-230
Identity = 317/444 (71.40%), Postives = 355/444 (79.95%), Query Frame = 1
Query:    1 MDRTACALQRDGVRPGDAIAICAGTSIDYTALFLGALRAGVTVAPLAPGSGTGSLLRMMQDAQVKLVFADAHGGESLGPAGTDAVARIALDNTAIGRPLGHWLADAGQQPAPVAVRPDWPFNIIYSSGTTGEPKGIVQSHGMRWSHVRRAATYHYDTQTVTLLSTPLYSNTTLVVLFPTLSFGGTVVLMPKFDASGYLALAQAQRVTHTMLVPVQYQRLMAHPDFDRFDLSSFLVKFSTSAPFNAAIKADVLRRWPGELVEFYGMTEGGGTCILEAHAHPEKLHTVGRPAEGHDIRLIDDNGAEVGPGESGEVVGHSGGMMTGYHGQPDKTREAEWFDPQGKRFIRTGDIGRFDADGFLTLFDRKKDMLISGGFNVYPSDLEAVLRKHSCVLEAAVVGVPSEKWGETPAAFVVLQPGQRMSADELLDWTNGQVGKTSAWVTCNF 1332
            MDR A +LQRDG++ GDAIAICA  S+ Y A+FLGALRAGV VAPLAPGS   SLLRMM+DA+ +L+F D    E+LGP       RIA+D +A GR L  WLA  G +PA V+  P WPFNIIYSSGTTG+PKGIVQ HGMRW+HV+R   Y Y  +TVTLLSTPLYSNTTLVV FPT++FGG V+LMPKFDA+GYL LAQ  RVTHTMLVPVQYQRLMAHP FD  DLS++  KFSTSAPFNAA+KADVL RWPG L+EFYGMTEGGGTCILEAH HP KLHTVG+PAEG DIRLID+ G EV PG  GEVVG S GMMTGYH QP+KTREAEWFD  GKRFIRTGD+GRFDADGFLTLFDRKKDM+ISGGFN+YPSDLEAV+R H  V + AVVGVPS +WGETP AFVV +PG    AD LL WTN Q+GKT    +  F
Sbjct:   48 MDRIAASLQRDGLKAGDAIAICAAASVSYAAVFLGALRAGVAVAPLAPGSTPASLLRMMEDAEARLLFTDMAAVETLGPTQDGTPLRIAIDGSAAGRGLDDWLAAPGARPAEVSPAPGWPFNIIYSSGTTGDPKGIVQGHGMRWAHVQRGGKYEYSPETVTLLSTPLYSNTTLVVFFPTIAFGGRVILMPKFDAAGYLQLAQQHRVTHTMLVPVQYQRLMAHPAFDAHDLSAYRFKFSTSAPFNAALKADVLARWPGGLIEFYGMTEGGGTCILEAHLHPTKLHTVGQPAEGSDIRLIDEEGCEVAPGADGEVVGSSAGMMTGYHRQPEKTREAEWFDATGKRFIRTGDVGRFDADGFLTLFDRKKDMVISGGFNIYPSDLEAVVRAHPAVADVAVVGVPSVQWGETPVAFVVRRPGDDTPADALLQWTNDQLGKTQRLASLEF 491          
BLAST of mRNA_P-wetherbeei_contig16751.1.1 vs. uniprot
Match: A0A257CW13_9BURK (4-coumarate--CoA ligase n=2 Tax=unclassified Burkholderiales TaxID=80841 RepID=A0A257CW13_9BURK)

HSP 1 Score: 649 bits (1674), Expect = 6.140e-230
Identity = 329/446 (73.77%), Postives = 360/446 (80.72%), Query Frame = 1
Query:    1 MDRTACALQRDGVRPGDAIAICAGTSIDYTALFLGALRAGVTVAPLAPGSGTGSLLRMMQDAQVKLVFADAHGGESLGPAGTD-AVARIALDNTAI-GRPLGHWLADAGQQPAPVAVRPDWPFNIIYSSGTTGEPKGIVQSHGMRWSHVRRAATYHYDTQTVTLLSTPLYSNTTLVVLFPTLSFGGTVVLMPKFDASGYLALAQAQRVTHTMLVPVQYQRLMAHPDFDRFDLSSFLVKFSTSAPFNAAIKADVLRRWPGELVEFYGMTEGGGTCILEAHAHPEKLHTVGRPAEGHDIRLIDDNGAEVGPGESGEVVGHSGGMMTGYHGQPDKTREAEWFDPQGKRFIRTGDIGRFDADGFLTLFDRKKDMLISGGFNVYPSDLEAVLRKHSCVLEAAVVGVPSEKWGETPAAFVVLQPGQRMSADELLDWTNGQVGKTSAWVTCNF 1332
            MDR A  LQ+ G+ PGDAIAICA  SI+Y A+FLGALRAGV VAPLAPGS   SL RM+ DA  +LVF DA   + +G A +  AV RIALD +A  G+ L  WL   G++P PVAV   WPFNIIYSSGTTGEPKGIVQSHGMRW+HV R   Y Y  QTVT+LSTPLYSNTTLVV FPTL+FGGTVVLMPKFDA+GYL LAQ  R THTMLVPVQYQRLMA PDFD  DLSSF++KFSTSAPFNAAIKADVL+RWPG L+EFYGMTEGGGTCILEAH HP KLHTVGR AEGHDIRLID++G E+  GE GEVVGHSGGMM GYH QPDKTREAEWFD  GKRFIRTGD+GRFDADGFLTL DRKKDM+ISGGFNVYPSDLEAVLR+H  VLE  VVGVPSE+WGETP AFVV QPG   SA+EL+ + N QVGKT       F
Sbjct:   45 MDRVASTLQQAGIGPGDAIAICATMSIEYAAVFLGALRAGVVVAPLAPGSAPSSLARMVADASARLVFTDAACIDVVGSADSSGAVPRIALDGSATAGQALHAWLLPPGKRPKPVAVEAAWPFNIIYSSGTTGEPKGIVQSHGMRWAHVCRVGVYQYGPQTVTVLSTPLYSNTTLVVFFPTLAFGGTVVLMPKFDAAGYLQLAQTHRATHTMLVPVQYQRLMARPDFDAHDLSSFVLKFSTSAPFNAAIKADVLKRWPGGLIEFYGMTEGGGTCILEAHLHPTKLHTVGRAAEGHDIRLIDEDGHELPEGEVGEVVGHSGGMMIGYHRQPDKTREAEWFDAAGKRFIRTGDVGRFDADGFLTLMDRKKDMVISGGFNVYPSDLEAVLREHPAVLEVTVVGVPSEQWGETPVAFVVTQPGASASAEELMQFVNRQVGKTQRVTALRF 490          
BLAST of mRNA_P-wetherbeei_contig16751.1.1 vs. uniprot
Match: A0A0H2LXG1_VARPD (Long-chain-fatty-acid--CoA ligase n=8 Tax=Variovorax TaxID=34072 RepID=A0A0H2LXG1_VARPD)

HSP 1 Score: 649 bits (1673), Expect = 6.310e-230
Identity = 318/447 (71.14%), Postives = 360/447 (80.54%), Query Frame = 1
Query:    1 MDRTACALQRDGVRPGDAIAICAGTSIDYTALFLGALRAGVTVAPLAPGSGTGSLLRMMQDAQVKLVFADAHGGESLGPAGTDAVARIALDNTAIGRPLGHWLADAGQQPAPVAVRPDWPFNIIYSSGTTGEPKGIVQSHGMRWSHVRRAATYHYDTQTVTLLSTPLYSNTTLVVLFPTLSFGGTVVLMPKFDASGYLALAQAQRVTHTMLVPVQYQRLMAHPDFDRFDLSSFLVKFSTSAPFNAAIKADVLRRWPGELVEFYGMTEGGGTCILEAHAHPEKLHTVGRPAEGHDIRLIDDNGAEVGPGE---SGEVVGHSGGMMTGYHGQPDKTREAEWFDPQGKRFIRTGDIGRFDADGFLTLFDRKKDMLISGGFNVYPSDLEAVLRKHSCVLEAAVVGVPSEKWGETPAAFVVLQPGQRMSADELLDWTNGQVGKTSAWVTCNF 1332
            MDR A +LQRDG++PGDAIA+CA +S++Y A+FLGALRAGV VAPLAPGS   SL RM++DA  +++F DA   E +GP     + R+ALD +A G+ L  WLA AG QP  V  +P WPFNIIYSSGTTGEPKGIVQ HGMRW+HV+R A Y Y   TVTLLSTPLYSNTTLVV FPTL+FGG VVLMPKFDA GYL LAQ +RVTHTMLVPVQYQRLMAHP FD  DLSSF  KFSTSAPF+AA+KADVL+RWPG L+EFYGMTEGGGTCILEAH HP KLHTVG PAEG DIRLID++G E+  G    +GEVVGHS GMMTGYH QPDKTREAEWFD  GKRFIRTGD+GRFDADGFLTLFDRKKDM+ISGGFN+YPSDLEAVLR H+ V + AV+GVPSE+WGETP AFVV + G   +AD LL W N Q+GKT      +F
Sbjct:   41 MDRVAASLQRDGLQPGDAIAVCAASSVNYAAVFLGALRAGVAVAPLAPGSTPASLARMIEDADARILFTDASAAEVVGPVKEGGIPRVALDGSAAGQGLERWLAPAGTQPRAVEAQPSWPFNIIYSSGTTGEPKGIVQGHGMRWAHVQRGAKYGYGPDTVTLLSTPLYSNTTLVVFFPTLAFGGCVVLMPKFDALGYLQLAQQRRVTHTMLVPVQYQRLMAHPRFDAHDLSSFRFKFSTSAPFSAALKADVLKRWPGGLIEFYGMTEGGGTCILEAHLHPNKLHTVGCPAEGSDIRLIDEDGNEIPRGNIELAGEVVGHSAGMMTGYHRQPDKTREAEWFDATGKRFIRTGDVGRFDADGFLTLFDRKKDMIISGGFNIYPSDLEAVLRGHAAVADVAVIGVPSEQWGETPVAFVVRREGDGTAADALLRWANAQLGKTQRLARLSF 487          
BLAST of mRNA_P-wetherbeei_contig16751.1.1 vs. uniprot
Match: A0A4Q3MUN4_9BURK (4-coumarate--CoA ligase n=2 Tax=Comamonadaceae TaxID=80864 RepID=A0A4Q3MUN4_9BURK)

HSP 1 Score: 647 bits (1669), Expect = 2.300e-229
Identity = 318/436 (72.94%), Postives = 356/436 (81.65%), Query Frame = 1
Query:    1 MDRTACALQRDGVRPGDAIAICAGTSIDYTALFLGALRAGVTVAPLAPGSGTGSLLRMMQDAQVKLVFADAHGGESLGPAGTDAVARIALDNTAIGRPLGHWLADAGQQPAPVAVRPDWPFNIIYSSGTTGEPKGIVQSHGMRWSHVRRAATYHYDTQTVTLLSTPLYSNTTLVVLFPTLSFGGTVVLMPKFDASGYLALAQAQRVTHTMLVPVQYQRLMAHPDFDRFDLSSFLVKFSTSAPFNAAIKADVLRRWPGELVEFYGMTEGGGTCILEAHAHPEKLHTVGRPAEGHDIRLIDDNGAEVGPGESGEVVGHSGGMMTGYHGQPDKTREAEWFDPQGKRFIRTGDIGRFDADGFLTLFDRKKDMLISGGFNVYPSDLEAVLRKHSCVLEAAVVGVPSEKWGETPAAFVVLQPGQRMSADELLDWTNGQVGKT 1308
            MDR A +LQRDG++PGDAIAICA  S+ Y A+FLGALRAGV VAPLAPGS   SL RMM+DA+ +L+F D  G E++GPA      RIALD + +GR L  WLA AG +   V V+P WPFNIIYSSGTTGEPKGIVQ HGMRW+HV R A Y Y   TVTLLSTPLYSNTTLVV FPTL+FGG VVLMP+FDA+GYLALA+  RVTHTMLVPVQYQRLMAHP FD  DLSS+  KFSTSAPFNAA+KADVL+RWPG L+EFYGMTEGGGT ILEAH HP KLHTVG+PAEG DIRLID++G E+  GESGEVVG S GMMTGYH QP+KTREAEWFD  GKRFIRTGD+GRFD DGFLTLFDRKKD++ISGGFN+YPSDLEAVLR H  V + AVVGVPSE+WGETP AFVV + G   +AD LL W N Q+GKT
Sbjct:   41 MDRIAASLQRDGLQPGDAIAICAAASVPYAAVFLGALRAGVAVAPLAPGSTAASLARMMEDAEARLLFTDPLGAEAIGPARQGTPPRIALDGSDVGRALDDWLAPAGTRTQAVEVQPAWPFNIIYSSGTTGEPKGIVQGHGMRWAHVTRGAKYQYSADTVTLLSTPLYSNTTLVVFFPTLAFGGCVVLMPRFDAAGYLALAEQHRVTHTMLVPVQYQRLMAHPAFDAHDLSSYQFKFSTSAPFNAALKADVLKRWPGGLIEFYGMTEGGGTVILEAHLHPAKLHTVGQPAEGSDIRLIDEDGKELPRGESGEVVGSSAGMMTGYHRQPEKTREAEWFDATGKRFIRTGDVGRFDDDGFLTLFDRKKDLVISGGFNIYPSDLEAVLRPHPAVADVAVVGVPSEQWGETPVAFVVRRAGDDTTADTLLQWANEQLGKT 476          
BLAST of mRNA_P-wetherbeei_contig16751.1.1 vs. uniprot
Match: A0A6P2E1U8_9BURK (Long-chain-fatty-acid--CoA ligase n=2 Tax=unclassified Variovorax TaxID=663243 RepID=A0A6P2E1U8_9BURK)

HSP 1 Score: 647 bits (1669), Expect = 2.950e-229
Identity = 319/436 (73.17%), Postives = 355/436 (81.42%), Query Frame = 1
Query:    1 MDRTACALQRDGVRPGDAIAICAGTSIDYTALFLGALRAGVTVAPLAPGSGTGSLLRMMQDAQVKLVFADAHGGESLGPAGTDAVARIALDNTAIGRPLGHWLADAGQQPAPVAVRPDWPFNIIYSSGTTGEPKGIVQSHGMRWSHVRRAATYHYDTQTVTLLSTPLYSNTTLVVLFPTLSFGGTVVLMPKFDASGYLALAQAQRVTHTMLVPVQYQRLMAHPDFDRFDLSSFLVKFSTSAPFNAAIKADVLRRWPGELVEFYGMTEGGGTCILEAHAHPEKLHTVGRPAEGHDIRLIDDNGAEVGPGESGEVVGHSGGMMTGYHGQPDKTREAEWFDPQGKRFIRTGDIGRFDADGFLTLFDRKKDMLISGGFNVYPSDLEAVLRKHSCVLEAAVVGVPSEKWGETPAAFVVLQPGQRMSADELLDWTNGQVGKT 1308
            MDR A +LQRDG++ GDAIAICA +S+ Y ALFLGALRAGV VAPLAPGS   SL RM+ DA+ +++F DA   E +  AG  A+ RIALD +A G     WLA A  +PA VA++   PFNIIYSSGTTGEPKGIVQ HGMRW+HVRR A Y Y   TVTLLSTPLY+NTTLVV FPT+++GG VVLMPKFDA+GYL LAQ  RVTHTMLVPVQYQRLMAHPDFD FDLSSF  KFSTSAPFNAA+KADVL+RWPG L+EFYGMTEGGGTCILEAH HP KLHTVGRPAEG DIRLIDD G EV  GE+GEVVGHS GMM GYH QP++TREAEWFDP GKRFIRTGD+GRFD DGFL LFDRKKDM+ISGGFN+YPSDLEAVLR H+ V + AVVGVPS +WGETP AFVV   G   SA+ LL WT+ QVGKT
Sbjct:   48 MDRIATSLQRDGLQAGDAIAICAASSVTYAALFLGALRAGVAVAPLAPGSTAASLARMIDDAEARILFVDAAAAELIAAAGDGAIPRIALDGSAAGADFDAWLAPAEARPAAVALQSTSPFNIIYSSGTTGEPKGIVQGHGMRWAHVRRGAKYGYGPDTVTLLSTPLYANTTLVVFFPTIAYGGCVVLMPKFDAAGYLKLAQHHRVTHTMLVPVQYQRLMAHPDFDTFDLSSFHAKFSTSAPFNAALKADVLKRWPGGLIEFYGMTEGGGTCILEAHLHPTKLHTVGRPAEGSDIRLIDDAGREVARGEAGEVVGHSAGMMVGYHRQPERTREAEWFDPDGKRFIRTGDVGRFDEDGFLVLFDRKKDMIISGGFNIYPSDLEAVLRGHAAVADVAVVGVPSVQWGETPVAFVVRHAGDDTSAEALLQWTHAQVGKT 483          
BLAST of mRNA_P-wetherbeei_contig16751.1.1 vs. uniprot
Match: A0A679JC26_VARPD (Long-chain-fatty-acid--CoA ligase n=4 Tax=Variovorax TaxID=34072 RepID=A0A679JC26_VARPD)

HSP 1 Score: 647 bits (1669), Expect = 3.410e-229
Identity = 314/447 (70.25%), Postives = 362/447 (80.98%), Query Frame = 1
Query:    1 MDRTACALQRDGVRPGDAIAICAGTSIDYTALFLGALRAGVTVAPLAPGSGTGSLLRMMQDAQVKLVFADAHGGESLGPAGTDAVARIALDNTAIGRPLGHWLADAGQQPAPVAVRPDWPFNIIYSSGTTGEPKGIVQSHGMRWSHVRRAATYHYDTQTVTLLSTPLYSNTTLVVLFPTLSFGGTVVLMPKFDASGYLALAQAQRVTHTMLVPVQYQRLMAHPDFDRFDLSSFLVKFSTSAPFNAAIKADVLRRWPGELVEFYGMTEGGGTCILEAHAHPEKLHTVGRPAEGHDIRLIDDNGAEVG---PGESGEVVGHSGGMMTGYHGQPDKTREAEWFDPQGKRFIRTGDIGRFDADGFLTLFDRKKDMLISGGFNVYPSDLEAVLRKHSCVLEAAVVGVPSEKWGETPAAFVVLQPGQRMSADELLDWTNGQVGKTSAWVTCNF 1332
            MDR A +LQRDG++PGDAIA+CA +S++Y A+FLGALRAGV VAPLAPGS   SL RM+ DA  +++F+DA   E +GPA    +AR+ALD + +G     WLA AG QP PVA +P WPFNIIYSSGTTGEPKGIVQ HGMRW+HV+R A Y YD++TVTLLSTPLYSNTTLVV FPT++FGG VVLMPKFDA GYL LA+  RVTHTMLVPVQYQRLMAHP FD  DLSS+  KFSTSAPFNAA+KADVL+RWPG L+EFYGMTEGGGTCILEAH +P KLHTVG+PA+G DIRLID+ G E+    P  +GEVVGHS GMMTGYH QP+KTREAEWFD  GKRFIRTGD+GRFDADGFLTLFDRKKDM+ISGGFN+YPSDLE V+R H+ V + AVVGVPSE+WGETP AFVV + G   +   LL WTN Q+GKT      +F
Sbjct:   49 MDRIAASLQRDGLQPGDAIAVCATSSVNYAAVFLGALRAGVAVAPLAPGSTPASLARMISDADARILFSDASAAEVIGPAQPGGIARVALDGSQVGGAFDAWLAPAGAQPRPVAAQPSWPFNIIYSSGTTGEPKGIVQGHGMRWAHVQRGARYEYDSRTVTLLSTPLYSNTTLVVFFPTIAFGGCVVLMPKFDALGYLQLAEKHRVTHTMLVPVQYQRLMAHPRFDAHDLSSYKFKFSTSAPFNAALKADVLKRWPGGLIEFYGMTEGGGTCILEAHLNPTKLHTVGQPAQGSDIRLIDEEGNELSRDDPDAAGEVVGHSAGMMTGYHRQPEKTREAEWFDAAGKRFIRTGDVGRFDADGFLTLFDRKKDMIISGGFNIYPSDLEGVVRGHAAVADVAVVGVPSEQWGETPVAFVVRREGDTTTEAALLQWTNDQLGKTQRLARLSF 495          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16751.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6L9KQR8_9BURK1.160e-25779.28Acyl--CoA ligase n=1 Tax=Rhodoferax sp. TaxID=5042... [more]
A0A0Q7CMN6_9BURK4.160e-23171.144-coumarate--CoA ligase n=23 Tax=Bacteria TaxID=2 ... [more]
A0A2N2RQT8_9PROT6.060e-23173.854-coumarate--CoA ligase n=1 Tax=Betaproteobacteria... [more]
A0A1V6F4P4_9PROT5.180e-23073.62Long-chain-fatty-acid--CoA ligase n=1 Tax=Alphapro... [more]
A0A126ZG54_9BURK5.320e-23071.404-coumarate--CoA ligase n=2 Tax=Variovorax sp. PAM... [more]
A0A257CW13_9BURK6.140e-23073.774-coumarate--CoA ligase n=2 Tax=unclassified Burkh... [more]
A0A0H2LXG1_VARPD6.310e-23071.14Long-chain-fatty-acid--CoA ligase n=8 Tax=Variovor... [more]
A0A4Q3MUN4_9BURK2.300e-22972.944-coumarate--CoA ligase n=2 Tax=Comamonadaceae Tax... [more]
A0A6P2E1U8_9BURK2.950e-22973.17Long-chain-fatty-acid--CoA ligase n=2 Tax=unclassi... [more]
A0A679JC26_VARPD3.410e-22970.25Long-chain-fatty-acid--CoA ligase n=4 Tax=Variovor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16751contigP-wetherbeei_contig16751:1..1386 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1157708.KB907463_gene819
PFAMsAMP-binding,AMP-binding_C
Model size1388
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.55e-231
EggNOG OGsCOG0318@1|root,COG0318@2|Bacteria,1MU6G@1224|Proteobacteria,2VHEI@28216|Betaproteobacteria,4AC9Q@80864|Comamonadaceae
DescriptionPFAM AMP-dependent synthetase and ligase
Cds size1386
COG categoryIQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186096.3967867-CDS-P-wetherbeei_contig16751:0..13861683186096.3967867-CDS-P-wetherbeei_contig16751:0..1386Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16751 1..1386 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16751.1.1prot_P-wetherbeei_contig16751.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16751 1..1386 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16751.1.1

>prot_P-wetherbeei_contig16751.1.1 ID=prot_P-wetherbeei_contig16751.1.1|Name=mRNA_P-wetherbeei_contig16751.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=462bp
MDRTACALQRDGVRPGDAIAICAGTSIDYTALFLGALRAGVTVAPLAPGS
GTGSLLRMMQDAQVKLVFADAHGGESLGPAGTDAVARIALDNTAIGRPLG
HWLADAGQQPAPVAVRPDWPFNIIYSSGTTGEPKGIVQSHGMRWSHVRRA
ATYHYDTQTVTLLSTPLYSNTTLVVLFPTLSFGGTVVLMPKFDASGYLAL
AQAQRVTHTMLVPVQYQRLMAHPDFDRFDLSSFLVKFSTSAPFNAAIKAD
VLRRWPGELVEFYGMTEGGGTCILEAHAHPEKLHTVGRPAEGHDIRLIDD
NGAEVGPGESGEVVGHSGGMMTGYHGQPDKTREAEWFDPQGKRFIRTGDI
GRFDADGFLTLFDRKKDMLISGGFNVYPSDLEAVLRKHSCVLEAAVVGVP
SEKWGETPAAFVVLQPGQRMSADELLDWTNGQVGKTSAWVTCNFSMSCPG
ARSARYSSGSLE
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mRNA from alignment at P-wetherbeei_contig16751:1..1386+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16751.1.1 ID=mRNA_P-wetherbeei_contig16751.1.1|Name=mRNA_P-wetherbeei_contig16751.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1386bp|location=Sequence derived from alignment at P-wetherbeei_contig16751:1..1386+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACCGCACCGCCTGTGCGCTGCAGCGCGACGGCGTTCGTCCGGGCGA TGCCATCGCCATCTGTGCGGGCACGTCCATCGATTACACCGCGCTATTCC TCGGCGCCTTGCGCGCCGGGGTCACGGTGGCGCCGCTGGCGCCGGGCTCC GGCACGGGCAGCTTGCTGCGCATGATGCAGGACGCGCAGGTCAAGCTGGT GTTCGCTGACGCACACGGCGGCGAGTCGCTCGGGCCGGCCGGCACGGATG CGGTGGCGCGCATCGCGCTGGACAACACGGCCATCGGGCGCCCGCTCGGC CACTGGCTGGCCGACGCCGGGCAACAACCCGCGCCAGTGGCGGTTCGCCC TGACTGGCCGTTCAACATCATCTACTCGTCGGGAACAACCGGTGAGCCCA AAGGCATCGTGCAATCGCACGGCATGCGCTGGTCGCATGTGCGCCGCGCT GCCACCTACCACTACGACACCCAGACTGTCACGCTGCTGTCCACGCCGCT GTATTCGAACACCACGCTGGTCGTTTTATTCCCGACGCTCAGTTTCGGTG GCACGGTCGTGCTGATGCCAAAATTCGATGCATCCGGTTATCTGGCGCTG GCGCAAGCCCAGCGTGTCACCCACACCATGCTGGTGCCGGTGCAATACCA GCGGCTGATGGCGCACCCGGACTTCGACCGTTTCGACCTGTCCAGTTTCC TCGTGAAGTTTTCGACCAGCGCACCTTTCAATGCGGCCATCAAAGCCGAC GTCCTCCGGCGCTGGCCAGGCGAACTGGTGGAGTTTTACGGCATGACGGA AGGCGGCGGCACCTGCATCCTGGAGGCCCATGCCCATCCCGAAAAACTGC ACACCGTGGGACGACCGGCCGAGGGCCACGACATCCGCCTGATTGATGAC AACGGCGCCGAGGTGGGCCCGGGCGAGTCCGGCGAAGTGGTGGGCCACTC GGGCGGCATGATGACGGGCTACCACGGCCAACCGGACAAAACCCGCGAAG CCGAGTGGTTCGACCCGCAGGGCAAAAGATTCATCCGCACCGGTGACATT GGCCGTTTCGACGCCGACGGTTTCCTGACGCTGTTTGATCGCAAAAAAGA CATGCTGATCTCGGGCGGTTTCAATGTGTACCCCAGTGATCTGGAAGCCG TCCTGCGCAAGCACTCTTGCGTGCTGGAAGCTGCGGTCGTGGGGGTACCC TCCGAGAAATGGGGCGAGACCCCGGCTGCGTTCGTGGTACTCCAGCCGGG ACAGCGGATGTCGGCGGACGAACTGCTGGACTGGACCAATGGCCAGGTAG GCAAAACCAGCGCCTGGGTCACCTGCAATTTCTCGATGAGCTGCCCCGGA GCGCGATCGGCAAGGTACTCAAGCGGGAGCTTAGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16751:1..1386+

>mRNA_P-wetherbeei_contig16751.1.1 ID=mRNA_P-wetherbeei_contig16751.1.1|Name=mRNA_P-wetherbeei_contig16751.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1386bp|location=Sequence derived from alignment at P-wetherbeei_contig16751:1..1386+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACCGCACCGCCTGTGCGCTGCAGCGCGACGGCGTTCGTCCGGGCGA
TGCCATCGCCATCTGTGCGGGCACGTCCATCGATTACACCGCGCTATTCC
TCGGCGCCTTGCGCGCCGGGGTCACGGTGGCGCCGCTGGCGCCGGGCTCC
GGCACGGGCAGCTTGCTGCGCATGATGCAGGACGCGCAGGTCAAGCTGGT
GTTCGCTGACGCACACGGCGGCGAGTCGCTCGGGCCGGCCGGCACGGATG
CGGTGGCGCGCATCGCGCTGGACAACACGGCCATCGGGCGCCCGCTCGGC
CACTGGCTGGCCGACGCCGGGCAACAACCCGCGCCAGTGGCGGTTCGCCC
TGACTGGCCGTTCAACATCATCTACTCGTCGGGAACAACCGGTGAGCCCA
AAGGCATCGTGCAATCGCACGGCATGCGCTGGTCGCATGTGCGCCGCGCT
GCCACCTACCACTACGACACCCAGACTGTCACGCTGCTGTCCACGCCGCT
GTATTCGAACACCACGCTGGTCGTTTTATTCCCGACGCTCAGTTTCGGTG
GCACGGTCGTGCTGATGCCAAAATTCGATGCATCCGGTTATCTGGCGCTG
GCGCAAGCCCAGCGTGTCACCCACACCATGCTGGTGCCGGTGCAATACCA
GCGGCTGATGGCGCACCCGGACTTCGACCGTTTCGACCTGTCCAGTTTCC
TCGTGAAGTTTTCGACCAGCGCACCTTTCAATGCGGCCATCAAAGCCGAC
GTCCTCCGGCGCTGGCCAGGCGAACTGGTGGAGTTTTACGGCATGACGGA
AGGCGGCGGCACCTGCATCCTGGAGGCCCATGCCCATCCCGAAAAACTGC
ACACCGTGGGACGACCGGCCGAGGGCCACGACATCCGCCTGATTGATGAC
AACGGCGCCGAGGTGGGCCCGGGCGAGTCCGGCGAAGTGGTGGGCCACTC
GGGCGGCATGATGACGGGCTACCACGGCCAACCGGACAAAACCCGCGAAG
CCGAGTGGTTCGACCCGCAGGGCAAAAGATTCATCCGCACCGGTGACATT
GGCCGTTTCGACGCCGACGGTTTCCTGACGCTGTTTGATCGCAAAAAAGA
CATGCTGATCTCGGGCGGTTTCAATGTGTACCCCAGTGATCTGGAAGCCG
TCCTGCGCAAGCACTCTTGCGTGCTGGAAGCTGCGGTCGTGGGGGTACCC
TCCGAGAAATGGGGCGAGACCCCGGCTGCGTTCGTGGTACTCCAGCCGGG
ACAGCGGATGTCGGCGGACGAACTGCTGGACTGGACCAATGGCCAGGTAG
GCAAAACCAGCGCCTGGGTCACCTGCAATTTCTCGATGAGCTGCCCCGGA
GCGCGATCGGCAAGGTACTCAAGCGGGAGCTTAGAG
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