mRNA_P-wetherbeei_contig16725.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16725.2.1 vs. uniprot
Match: A0A835YSN6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSN6_9STRA) HSP 1 Score: 196 bits (498), Expect = 8.740e-60 Identity = 97/144 (67.36%), Postives = 112/144 (77.78%), Query Frame = 1
Query: 73 KVAVSTEPKCYIDTGICAVTFQKDKVRQASLYVFPSGIVFGLFWLGALYEIIEPFINLNPIFILALAAPPTYVTSKWFTENVFLRDDPLVTSGPCPSCGFKNRVFFGTIVGVEGFTEEATVKCSNCKEEIVIRRRDLRARTLPK 504
KVAVSTEPKCYIDTGIC VTFQ+DK R+A+LYV P GI LF LGALYE++EP ++NP+ L LA PTY +K+FT+NVF +DP + GPCPSCG N VFFG ++GVEG EEA KCSNCKEEI IRRRDLRART PK
Sbjct: 142 KVAVSTEPKCYIDTGICTVTFQEDKFREATLYV-PVGIPTLLFSLGALYELLEPLRSVNPLVTLVLATLPTYFFTKFFTDNVFATNDPKIAYGPCPSCGASNHVFFGNVLGVEGPGEEANFKCSNCKEEITIRRRDLRARTSPK 284
BLAST of mRNA_P-wetherbeei_contig16725.2.1 vs. uniprot
Match: A0A835Z693_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z693_9STRA) HSP 1 Score: 189 bits (480), Expect = 1.330e-56 Identity = 96/169 (56.80%), Postives = 117/169 (69.23%), Query Frame = 1
Query: 1 LQGAPIMTDAEFDVLKQSLRETGSKVAVSTEPKCYIDTGICAVTFQKDKVRQASLYVFPSGIVFGLFWLGALYEIIEPFINLNPIFILALAAPPTYVTSKWFTENVFLRDDPLVTSGPCPSCGFKNRVFFGTIVGVEGFTEEATVKCSNCKEEIVIRRRDLRARTLPKV 507
L+G P +T LR+ GSKVAVSTEPKCYIDTGIC VTFQ+DK R+A+LY P GI LF LGALYE+ EP ++NP+ L LA PT+ +K FT++VF+ ++ V GPCPSCG N VFFG ++GV G + A KCS CKE+I IRRRDLRART P V
Sbjct: 156 LKGEPFLTXXXXXXXXXXLRDAGSKVAVSTEPKCYIDTGICTVTFQEDKFRRATLYT-PVGIPTLLFTLGALYEVFEPLRSVNPLVTLILATIPTWAFTKAFTDSVFITNEAKVAYGPCPSCGATNHVFFGNVLGVVGPGDTAEFKCSKCKEQITIRRRDLRARTAPSV 323
BLAST of mRNA_P-wetherbeei_contig16725.2.1 vs. uniprot
Match: A0A7S3QAK1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QAK1_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.830e-50 Identity = 84/166 (50.60%), Postives = 113/166 (68.07%), Query Frame = 1
Query: 7 GAPIMTDAEFDVLKQSLRETGSKVAVSTEPKCYIDTGICAVTFQKDKVRQASLYVFPSGIVFGLFWLGALYEIIEPFINLNPIFILALAAPPTYVTSKWFTENVFLRDDPLVTSGPCPSCGFKNRVFFGTIVGVEGFTEEATVKCSNCKEEIVIRRRDLRARTLPK 504
G P+M+D EFD LK L+E SK AV+TEPKCYID+GIC VT +DK R LY+ P+G+ + WLG +EIIEPFI +NPI ++AL P + SK TE+ + +V GPCPSC +NR++FG I+ VEGF + AT+KC +CK + ++R LRA T+PK
Sbjct: 158 GTPMMSDVEFDALKTELKEEKSKFAVTTEPKCYIDSGICTVTMDEDKFRNNLLYL-PAGVALFIGWLGIGFEIIEPFIRVNPILLIALGTPGIFAGSKIITEDYLFPKNKIVY-GPCPSCEAENRIYFGDILTVEGFDDVATIKCPSCKVQFSVQRESLRASTVPK 321
BLAST of mRNA_P-wetherbeei_contig16725.2.1 vs. uniprot
Match: A0A7S0SSR4_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SSR4_9STRA) HSP 1 Score: 168 bits (425), Expect = 3.040e-48 Identity = 78/166 (46.99%), Postives = 117/166 (70.48%), Query Frame = 1
Query: 4 QGAPIMTDAEFDVLKQSLRETGSKVAVSTEPKCYIDTGICAVTFQKDKVRQASLYVFPSGIVFGLFWLGALYEIIEPF-INLNPIFILALAAPPTYVTSKWFTENVFLRDDPLVTSGPCPSCGFKNRVFFGTIVGVEGFTEEATVKCSNCKEEIVIRRRDLRARTL 498
+G P++TD++FD LK L+ET SK+AVS EPKCY+DTG+C VT++KD +R SL FP+ + L +LG YE++ ++ NP+ +L + P Y++S T+ +F +D PLV +G CP+CG +N+VFFG ++G+EG EE++VKC+NCK + I+R LR TL
Sbjct: 153 KGTPVLTDSQFDELKSYLKETNSKLAVSNEPKCYVDTGVCKVTWEKDVIRTLSLS-FPAVAIVTLLYLGIFYELLALIDVSANPLLLLLAGSYPIYLSSDKITKEIFFKD-PLVAAGKCPNCGVENKVFFGGVLGIEGDVEESSVKCTNCKTNLTIKRSSLRVSTL 316
BLAST of mRNA_P-wetherbeei_contig16725.2.1 vs. uniprot
Match: D7FM52_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM52_ECTSI) HSP 1 Score: 164 bits (416), Expect = 9.740e-47 Identity = 82/144 (56.94%), Postives = 104/144 (72.22%), Query Frame = 1
Query: 76 VAVSTEPKCYIDTGICAVTFQKDKVRQASLYVFPSGIVFGLFWLGALYEIIEPFINLNPIFILALAAPPTYVTSKWFTENVFLRDDPLVTSGPCPSCGFKNRVFFGTIVGVEGFTEEATVKCSNCKEEIVIRRRDLRARTLPKV 507
VAVSTEPKCYIDTGIC VTFQ+D R+ + Y+ P+ +FGL +LGA ++IIEP LNP+ L L PT SK FT+ +D+ V SGPCPSCG +NRVFFG+++GV+G +++ KC NC E I IRR DLRARTLPK+
Sbjct: 205 VAVSTEPKCYIDTGICTVTFQEDLFRRFATYL-PANFIFGLAFLGASWQIIEPIRYLNPLATLLLLTAPTIAASKKFTDLCLYQDNGTVASGPCPSCGAQNRVFFGSMLGVKGNIDDSEFKCDNCGEIIKIRRADLRARTLPKL 347
BLAST of mRNA_P-wetherbeei_contig16725.2.1 vs. uniprot
Match: A0A448Z6R2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6R2_9STRA) HSP 1 Score: 158 bits (399), Expect = 2.130e-44 Identity = 75/144 (52.08%), Postives = 98/144 (68.06%), Query Frame = 1
Query: 73 KVAVSTEPKCYIDTGICAVTFQKDKVRQASLYVFPSGIVFGLFWLGALYEIIEPFINLNPIFILALAAPPTYVTSKWFTENVFLRDDPLVTSGPCPSCGFKNRVFFGTIVGVEGFTEEATVKCSNCKEEIVIRRRDLRARTLPK 504
K AV TEPKCYID+G+C VT Q+DK R LY+ P+G+ + WLG +E+IEPFI +NPI + AL P SK TE + D L+ GPCPSC ++NR++FG I+GVEGF +E +VKC NCK ++R+ LRA TLPK
Sbjct: 187 KFAVDTEPKCYIDSGVCKVTLQEDKFRSNLLYL-PAGLTLSVVWLGLAFELIEPFIRVNPIILFALGLPLIVDGSKKITEELIFTDK-LIAYGPCPSCEYENRIYFGDILGVEGFGDEGSVKCPNCKTVFTVQRKTLRASTLPK 328
BLAST of mRNA_P-wetherbeei_contig16725.2.1 vs. uniprot
Match: A0A8J9WZ54_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9WZ54_PHATR) HSP 1 Score: 149 bits (377), Expect = 2.090e-42 Identity = 71/144 (49.31%), Postives = 97/144 (67.36%), Query Frame = 1
Query: 73 KVAVSTEPKCYIDTGICAVTFQKDKVRQASLYVFPSGIVFGLFWLGALYEIIEPFINLNPIFILALAAPPTYVTSKWFTENVFLRDDPLVTSGPCPSCGFKNRVFFGTIVGVEGFTEEATVKCSNCKEEIVIRRRDLRARTLPK 504
K AV TEPKCYIDTGIC VT Q+DK R LY+ P+ I+ + W+G +E++EPFI +NP+ + + P Y+ ++ TE F+ ++ + GPCPSC +NRV+FG I+GVEGFT+ A KC NCK ++R LRA TLPK
Sbjct: 71 KFAVQTEPKCYIDTGICKVTLQEDKFRSNLLYL-PATIIGVVAWIGFGFEVLEPFIRINPVVLTLMGTPLIYLGARTLTEE-FIFENKFLAYGPCPSCQAENRVYFGNILGVEGFTDVANAKCPNCKTTFTVQRNTLRASTLPK 212
BLAST of mRNA_P-wetherbeei_contig16725.2.1 vs. uniprot
Match: A0A7S4N636_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N636_9STRA) HSP 1 Score: 152 bits (385), Expect = 3.390e-42 Identity = 76/143 (53.15%), Postives = 98/143 (68.53%), Query Frame = 1
Query: 76 VAVSTEPKCYIDTGICAVTFQKDKVRQASLYVFPSGIVFGLFWLGALYEIIEPFINLNPIFILALAAPPTYVTSKWFTENVFLRDDPLVTSGPCPSCGFKNRVFFGTIVGVEGFTEEATVKCSNCKEEIVIRRRDLRARTLPK 504
+AVST+PKCYID+GIC VTFQKD R LY+ P G +F + WLG +E IEP I LNPI +L L A P Y S FT+ F+ + + GPCPSC +NRV+FG I+GVEG+ E A +KC NCK I ++++ LRA +LPK
Sbjct: 198 IAVSTDPKCYIDSGICRVTFQKDNFRNNLLYL-PLGAIFTVVWLGLGFEFIEPLIRLNPIVLLGLGAYPIYKYSIEFTDK-FIFPNNSIAYGPCPSCEAENRVYFGDILGVEGYNEVAEIKCKNCKAVIEVQQKTLRASSLPK 338
BLAST of mRNA_P-wetherbeei_contig16725.2.1 vs. uniprot
Match: A0A1E7FKP9_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKP9_9STRA) HSP 1 Score: 148 bits (374), Expect = 3.930e-41 Identity = 74/144 (51.39%), Postives = 94/144 (65.28%), Query Frame = 1
Query: 73 KVAVSTEPKCYIDTGICAVTFQKDKVRQASLYVFPSGIVFGLFWLGALYEIIEPFINLNPIFILALAAPPTYVTSKWFTENVFLRDDPLVTSGPCPSCGFKNRVFFGTIVGVEGFTEEATVKCSNCKEEIVIRRRDLRARTLPK 504
K AV T+PKCYIDTG+C VT QKDK R LY+ P+G + + WL +EIIEP I LNPI + AL P + TE+ +L + LV GPCPSC ++NR++FG ++GVEGF E VKC NCK ++R LRA TLPK
Sbjct: 143 KFAVDTDPKCYIDTGVCKVTLQKDKFRSNLLYL-PAGAILSIVWLALGFEIIEPIIRLNPIILFALGTPLITKGATVITED-YLFVNNLVAYGPCPSCEYENRLYFGDMLGVEGFGAEGNVKCPNCKTVFTVQRESLRASTLPK 284
BLAST of mRNA_P-wetherbeei_contig16725.2.1 vs. uniprot
Match: B7FRN6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRN6_PHATC) HSP 1 Score: 149 bits (376), Expect = 5.490e-41 Identity = 70/144 (48.61%), Postives = 97/144 (67.36%), Query Frame = 1
Query: 73 KVAVSTEPKCYIDTGICAVTFQKDKVRQASLYVFPSGIVFGLFWLGALYEIIEPFINLNPIFILALAAPPTYVTSKWFTENVFLRDDPLVTSGPCPSCGFKNRVFFGTIVGVEGFTEEATVKCSNCKEEIVIRRRDLRARTLPK 504
K AV TEPKCYIDTGIC VT Q+DK R LY+ P+ ++ + W+G +E++EPFI +NP+ + + P Y+ ++ TE F+ ++ + GPCPSC +NRV+FG I+GVEGFT+ A KC NCK ++R LRA TLPK
Sbjct: 183 KFAVQTEPKCYIDTGICKVTLQEDKFRSNLLYL-PATVIGVVAWIGFGFEVLEPFIRINPVVLTLMGTPLIYLGARTLTEE-FIFENKFLAYGPCPSCQAENRVYFGNILGVEGFTDVANAKCPNCKTTFTVQRNTLRASTLPK 324 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16725.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16725.2.1 >prot_P-wetherbeei_contig16725.2.1 ID=prot_P-wetherbeei_contig16725.2.1|Name=mRNA_P-wetherbeei_contig16725.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=164bp MTDAEFDVLKQSLRETGSKVAVSTEPKCYIDTGICAVTFQKDKVRQASLYback to top mRNA from alignment at P-wetherbeei_contig16725:337..1124- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16725.2.1 ID=mRNA_P-wetherbeei_contig16725.2.1|Name=mRNA_P-wetherbeei_contig16725.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=788bp|location=Sequence derived from alignment at P-wetherbeei_contig16725:337..1124- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16725:337..1124- >mRNA_P-wetherbeei_contig16725.2.1 ID=mRNA_P-wetherbeei_contig16725.2.1|Name=mRNA_P-wetherbeei_contig16725.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig16725:337..1124- (Phaeothamnion wetherbeei SAG_119_79)back to top |