mRNA_P-wetherbeei_contig167.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig167.3.1
Unique NamemRNA_P-wetherbeei_contig167.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig167.3.1 vs. uniprot
Match: A0A7S2W4P3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4P3_9STRA)

HSP 1 Score: 145 bits (365), Expect = 1.850e-39
Identity = 73/115 (63.48%), Postives = 96/115 (83.48%), Query Frame = 1
Query:   34 SSLESLIGTAPGEVRAAWSECQQIRSAIAKNNDVKRKIGKRLRSNERQAERFRAELASRVTGEDRKELMELQYRIGRLELENMELEQSRIVHASILRGKDLTIQKLRLQVAVRDK 378
            S  E L+  APG+VRAAW EC+Q+R AI +N+ VKR I KRLR NER AE F+  L +RVTGEDR++L++LQY+IGRLELENM+LEQ++ +H SI++GKDLTIQKL+LQ+A++DK
Sbjct:  116 SMAEELLADAPGDVRAAWGECEQLRHAIDRNSSVKRSIAKRLRENERAAEEFKTTLNTRVTGEDRQQLIQLQYKIGRLELENMQLEQAQFIHNSIMKGKDLTIQKLQLQLAMKDK 230          
BLAST of mRNA_P-wetherbeei_contig167.3.1 vs. uniprot
Match: D8LJ11_ECTSI (Kinesin motor domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ11_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 4.090e-39
Identity = 76/111 (68.47%), Postives = 95/111 (85.59%), Query Frame = 1
Query:   46 SLIGTAPGEVRAAWSECQQIRSAIAKNNDVKRKIGKRLRSNERQAERFRAELASRVTGEDRKELMELQYRIGRLELENMELEQSRIVHASILRGKDLTIQKLRLQVAVRDK 378
            S+I   P EVR AW EC+Q+ SAI+KNN+ KRKI +RLR+N RQAERF+A+L  ++TGEDR +LM LQYRIG+LEL+NMELEQSRIVH S +RGKDLTI+KL+LQ+AVRD+
Sbjct:  583 SIISPPPPEVRVAWRECEQLCSAISKNNETKRKISRRLRNNGRQAERFKADLDGKITGEDRNQLMRLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIEKLQLQLAVRDR 693          
BLAST of mRNA_P-wetherbeei_contig167.3.1 vs. uniprot
Match: A0A7S3YF43_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YF43_HETAK)

HSP 1 Score: 139 bits (350), Expect = 7.930e-39
Identity = 76/118 (64.41%), Postives = 92/118 (77.97%), Query Frame = 1
Query:   25 DGSSSLESLIGTAPGEVRAAWSECQQIRSAIAKNNDVKRKIGKRLRSNERQAERFRAELASRVTGEDRKELMELQYRIGRLELENMELEQSRIVHASILRGKDLTIQKLRLQVAVRDK 378
            DG+   E L G AP +VR AW +   +R A+ KNN  KR I KRLR NERQAE  R +LA+++TGEDR +LMELQYRIG+LELENMELEQS+IVH S+++GKDLTI KLRLQ+ VRDK
Sbjct:   62 DGAGMAELLAG-APSDVRRAWRDVGALRRAVEKNNSTKRSIAKRLRHNERQAESMRQDLATKITGEDRIQLMELQYRIGKLELENMELEQSKIVHDSVMKGKDLTIMKLRLQLQVRDK 178          
BLAST of mRNA_P-wetherbeei_contig167.3.1 vs. uniprot
Match: A0A7S3HBS1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBS1_9STRA)

HSP 1 Score: 142 bits (359), Expect = 3.140e-38
Identity = 73/110 (66.36%), Postives = 89/110 (80.91%), Query Frame = 1
Query:   49 LIGTAPGEVRAAWSECQQIRSAIAKNNDVKRKIGKRLRSNERQAERFRAELASRVTGEDRKELMELQYRIGRLELENMELEQSRIVHASILRGKDLTIQKLRLQVAVRDK 378
            +I     E+  AW EC+Q+R AI KNN +K+ I KRLR NE++AE FR EL  ++TGEDR+ELMELQY++GRLELENMELEQ RIVH SIL+GKDL IQKL+LQ+AVRDK
Sbjct:   52 IIANGDPEIVEAWQECEQLRKAIMKNNGMKKNIAKRLRHNEKEAENFRDELGDKITGEDRRELMELQYQVGRLELENMELEQHRIVHESILKGKDLEIQKLKLQLAVRDK 161          
BLAST of mRNA_P-wetherbeei_contig167.3.1 vs. uniprot
Match: A0A6H5L427_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L427_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 1.740e-37
Identity = 73/109 (66.97%), Postives = 91/109 (83.49%), Query Frame = 1
Query:   49 LIGTAPGEVRAAWSECQQIRSAIAKNNDVKRKIGKRLRSNERQAERFRAELASRVTGEDRKELMELQYRIGRLELENMELEQSRIVHASILRGKDLTIQKLRLQVAVRD 375
            +I   P EVR AW EC+Q+ SAI+KNN+ KRKI +RLR+N RQAERF+A+L  ++TGEDR +LM LQYRIG+LEL+NMELEQSRIVH S +RGKDLTI+KL+LQV + D
Sbjct:  932 IISPPPPEVRVAWRECEQLCSAISKNNETKRKISRRLRNNGRQAERFKADLDGKITGEDRNQLMRLQYRIGKLELDNMELEQSRIVHESAMRGKDLTIEKLQLQVGITD 1040          
BLAST of mRNA_P-wetherbeei_contig167.3.1 vs. uniprot
Match: A0A7S2CYK5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CYK5_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.320e-36
Identity = 67/110 (60.91%), Postives = 94/110 (85.45%), Query Frame = 1
Query:   49 LIGTAPGEVRAAWSECQQIRSAIAKNNDVKRKIGKRLRSNERQAERFRAELASRVTGEDRKELMELQYRIGRLELENMELEQSRIVHASILRGKDLTIQKLRLQVAVRDK 378
            L+  AP  V++AWSEC+Q+++AI KN+ +KR I KRLR NERQAE FR    +R+TG DR++L++LQY+IG+LELENM+LEQ++I+H S+++GKDLTIQKL+LQ+A+RDK
Sbjct:  141 LLKVAPDSVKSAWSECEQLKNAIDKNSSMKRSIAKRLRDNERQAEEFRQTTTTRITGYDRQQLLQLQYKIGKLELENMQLEQAQIIHNSMMKGKDLTIQKLQLQLAMRDK 250          
BLAST of mRNA_P-wetherbeei_contig167.3.1 vs. uniprot
Match: A0A2R5GMM0_9STRA (Kinesin-like protein KIF19 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMM0_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 5.830e-20
Identity = 54/108 (50.00%), Postives = 76/108 (70.37%), Query Frame = 1
Query:   52 IGTAPGEVRAAWSECQQIRSAIAKNNDVKRKIGKRLRSNERQAERFRAELASRVTGEDRKELMELQYRIGRLELENMELEQSRIVHASILRGKDLTIQKLRLQVAVRD 375
            I T P  VRAA  E QQ++ A  KN+ +K  I +RL  NE+ +   R ++ +R+T E+R+ELMEL+YRIG LELENMELE+SR++H   ++ KD+ IQ+L  Q+ VRD
Sbjct: 1073 IVTEPPNVRAARIETQQLQRANQKNSQLKADIERRLAENEKASAALRTQMETRITSEERRELMELEYRIGMLELENMELERSRMLHRCSVQYKDMLIQRLLDQLQVRD 1180          
BLAST of mRNA_P-wetherbeei_contig167.3.1 vs. uniprot
Match: A0A5A8CQL8_CAFRO (Kinesin motor domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CQL8_CAFRO)

HSP 1 Score: 92.4 bits (228), Expect = 2.610e-19
Identity = 45/100 (45.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query:   79 AAWSECQQIRSAIAKNNDVKRKIGKRLRSNERQAERFRAELASRVTGEDRKELMELQYRIGRLELENMELEQSRIVHASILRGKDLTIQKLRLQVAVRDK 378
            AA S  +++R+ +A N++ KR + +RL+ NE +A+  R ++ +  +  +R++L++LQYR+G LELENMELE SR++HA++LR KDL +++LRLQ+  RD+
Sbjct:  543 AARSTVEKLRATVATNSEAKRDLLRRLKENESEAKELRTDIEAHSSSRERRDLLDLQYRVGVLELENMELEHSRMLHAAVLRRKDLELRRLRLQIRARDR 642          
BLAST of mRNA_P-wetherbeei_contig167.3.1 vs. uniprot
Match: A0A812NTX8_9DINO (Kif19 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812NTX8_9DINO)

HSP 1 Score: 92.4 bits (228), Expect = 2.730e-19
Identity = 45/100 (45.00%), Postives = 76/100 (76.00%), Query Frame = 1
Query:   79 AAWSECQQIRSAIAKNNDVKRKIGKRLRSNERQAERFRAELASRVTGEDRKELMELQYRIGRLELENMELEQSRIVHASILRGKDLTIQKLRLQVAVRDK 378
            AA S  +++R+ +A N++ KR + +RL+ NE +A+  R ++ +  +  +R++L++LQYR+G LELENMELE SR++HA++LR KDL +++LRLQ+  RD+
Sbjct:  597 AARSTVEKLRATVATNSEAKRDLLRRLKENESEAKELRTDIEAHSSSRERRDLLDLQYRVGVLELENMELEHSRMLHAAVLRRKDLELRRLRLQIRARDR 696          
BLAST of mRNA_P-wetherbeei_contig167.3.1 vs. uniprot
Match: A0A485KW97_9STRA (Kinesin-like protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW97_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.310e-18
Identity = 47/103 (45.63%), Postives = 74/103 (71.84%), Query Frame = 1
Query:   70 EVRAAWSECQQIRSAIAKNNDVKRKIGKRLRSNERQAERFRAELASRVTGEDRKELMELQYRIGRLELENMELEQSRIVHASILRGKDLTIQKLRLQVAVRDK 378
            ++  A  E  +++  I   +  K ++ ++LR  ER AE FRA L   +T ++++EL+ ++YRIG+LELENMELEQ+R VH ++ RGKDLT++KL+LQ+ +RDK
Sbjct:  577 DIAVAKLEIARLQDEIKDLSTEKSELTRKLRQTERAAEEFRAALEHTITSDEKRELLLMEYRIGKLELENMELEQTRTVHETLSRGKDLTLEKLKLQLRLRDK 679          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig167.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A7S2W4P3_9STRA1.850e-3963.48Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
D8LJ11_ECTSI4.090e-3968.47Kinesin motor domain-containing protein, putative ... [more]
A0A7S3YF43_HETAK7.930e-3964.41Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3HBS1_9STRA3.140e-3866.36Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A6H5L427_9PHAE1.740e-3766.97Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A7S2CYK5_9STRA1.320e-3660.91Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A2R5GMM0_9STRA5.830e-2050.00Kinesin-like protein KIF19 n=1 Tax=Hondaea ferment... [more]
A0A5A8CQL8_CAFRO2.610e-1945.00Kinesin motor domain-containing protein n=4 Tax=Ca... [more]
A0A812NTX8_9DINO2.730e-1945.00Kif19 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A485KW97_9STRA2.310e-1845.63Kinesin-like protein n=1 Tax=Aphanomyces stellatus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig167contigP-wetherbeei_contig167:9623..10419 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LJ11
PFAMsKinesin
Model size382
Max annot lvl2759|Eukaryota
KEGG koko:K10401
Hectar predicted targeting categoryother localisation
Exons3
Evalue6.71e-40
EggNOG OGsCOG5059@1|root,KOG0242@2759|Eukaryota
Descriptionmicrotubule motor activity
Cds size378
COG categoryZ
BRITEko00000,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186094.8872957-CDS-P-wetherbeei_contig167:9622..97861683186094.8872957-CDS-P-wetherbeei_contig167:9622..9786Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig167 9623..9786 +
1683186094.895896-CDS-P-wetherbeei_contig167:10014..100991683186094.895896-CDS-P-wetherbeei_contig167:10014..10099Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig167 10015..10099 +
1683186094.9034412-CDS-P-wetherbeei_contig167:10288..104171683186094.9034412-CDS-P-wetherbeei_contig167:10288..10417Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig167 10289..10417 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig167.3.1prot_P-wetherbeei_contig167.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig167 9623..10417 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig167.3.1

>prot_P-wetherbeei_contig167.3.1 ID=prot_P-wetherbeei_contig167.3.1|Name=mRNA_P-wetherbeei_contig167.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=126bp
TGNGGDDLDGSSSLESLIGTAPGEVRAAWSECQQIRSAIAKNNDVKRKIG
KRLRSNERQAERFRAELASRVTGEDRKELMELQYRIGRLELENMELEQSR
IVHASILRGKDLTIQKLRLQVAVRDK
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mRNA from alignment at P-wetherbeei_contig167:9623..10419+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig167.3.1 ID=mRNA_P-wetherbeei_contig167.3.1|Name=mRNA_P-wetherbeei_contig167.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=797bp|location=Sequence derived from alignment at P-wetherbeei_contig167:9623..10419+ (Phaeothamnion wetherbeei SAG_119_79)
ACGGGGAACGGGGGCGACGACTTGGACGGCAGCAGCTCGCTCGAGTCGCT CATTGGGACGGCACCAGGAGAGGTCCGGGCGGCGTGGTCCGAGTGCCAGC AGATCCGCAGCGCCATCGCCAAGAACAACGACGTCAAGAGGAAGATCGGG AAGCGCCTGCGCAGGTGTGTAAGCATGGTGGCGGGCGGTTGTCGACAAAG ATGTGCTGGCTGGTGTGGCGGGCCCACGGTCACTCATCCTTTGCCTTTCG CCTTTCATTCGTGCCGCTGTTGCCACATCCTTTATTGCTGCTATCGATGC ACCACAGTCCTTTAAATCTCTGGCTGCACGCTTCCGGCCACGGCTTTTTC ACGCATCTTTCGCTGTCCGGCCTGCCGTATCGCCTGGAACAGCAACGAGC GGCAAGCAGAGCGTTTCCGCGCGGAGCTGGCGAGCCGGGTGACGGGGGAA GACCGCAAGGAGCTGATGGAGCTGCAGGTGAGAACAGCAACGGGAGTTAT CCAATGGCGACTGGCTGCCCCATTCATCGCTGCAGCTGCTGGCGGCGACG CCTGACATTACGATGGCTTTCTTTGGCGTAATCCAACCGCGTTCTGACTA ATCCTCTTGCACATGTGAAATGCGAACGAAGAGTTGAGCGCATTCCCCGC CGGCCGGTCGGCGCAGTACCGCATCGGGCGGCTGGAGCTGGAGAACATGG AGCTGGAGCAGAGCCGCATCGTGCACGCCTCCATTCTGCGCGGCAAGGAC CTGACCATCCAGAAGCTGCGCCTGCAGGTCGCCGTCCGCGATAAGGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig167:9623..10419+

>mRNA_P-wetherbeei_contig167.3.1 ID=mRNA_P-wetherbeei_contig167.3.1|Name=mRNA_P-wetherbeei_contig167.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=378bp|location=Sequence derived from alignment at P-wetherbeei_contig167:9623..10419+ (Phaeothamnion wetherbeei SAG_119_79)
ACGGGGAACGGGGGCGACGACTTGGACGGCAGCAGCTCGCTCGAGTCGCT
CATTGGGACGGCACCAGGAGAGGTCCGGGCGGCGTGGTCCGAGTGCCAGC
AGATCCGCAGCGCCATCGCCAAGAACAACGACGTCAAGAGGAAGATCGGG
AAGCGCCTGCGCAGCAACGAGCGGCAAGCAGAGCGTTTCCGCGCGGAGCT
GGCGAGCCGGGTGACGGGGGAAGACCGCAAGGAGCTGATGGAGCTGCAGT
ACCGCATCGGGCGGCTGGAGCTGGAGAACATGGAGCTGGAGCAGAGCCGC
ATCGTGCACGCCTCCATTCTGCGCGGCAAGGACCTGACCATCCAGAAGCT
GCGCCTGCAGGTCGCCGTCCGCGATAAG
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