mRNA_P-wetherbeei_contig16695.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16695.2.1
Unique NamemRNA_P-wetherbeei_contig16695.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig16695.2.1 vs. uniprot
Match: A0A4P6B9R9_9THEO (Uncharacterized protein n=2 Tax=Moorella TaxID=44260 RepID=A0A4P6B9R9_9THEO)

HSP 1 Score: 55.5 bits (132), Expect = 1.120e-5
Identity = 55/189 (29.10%), Postives = 87/189 (46.03%), Query Frame = 1 
Query:   16 AGVWLLAGLQIRAVGEVAAATPALLAETLLLATPLPKLRGRGFNILIGLALAASIAQQAARPDLLKVWPENLYPDAALARIARENPQAGVFCSYHWGGYLVFRGLQPYVHGMTTYFPAQR---FTDYLAA---LQSPTAGKDLKSAGYGWVLLAYNSFDDAHMGLAHRLADPASGWGLVYFDDASMLFA 564
            AG+  +  L + AV   AAA PAL A     + P  K+      +L  L L A+++           WP + +P+AA++ + RE     VF  Y WGGYL++RG++P++ G    +         DY  A   L+ P         G   VL+  +S+   ++    R  D    W  VY D+A+++FA
Sbjct:  290 AGLVSMRHLAVFAVLWPAAAAPALAAR---FSGPGMKIAAATALVLTALGLTATVSSPPP------AWPGSGFPEAAVSYMVREGLTGRVFNYYTWGGYLIWRGVEPFIDGRADMYVLSGSGVMDDYDRAEGILRPPEPDAVFAKWGVKTVLMPSDSWMALYLS---RNPD----WREVYRDNAAVVFA 462
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16695.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A4P6B9R9_9THEO1.120e-529.10Uncharacterized protein n=2 Tax=Moorella TaxID=442... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16695contigP-wetherbeei_contig16695:901..1476 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog234267.Acid_2561
Model size576
Max annot lvl57723|Acidobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue6.46e-06
EggNOG OGsCOG1287@1|root,COG1287@2|Bacteria,3Y5FJ@57723|Acidobacteria
Descriptionoligosaccharyl transferase activity
Cds size576
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186094.6306918-CDS-P-wetherbeei_contig16695:900..14761683186094.6306918-CDS-P-wetherbeei_contig16695:900..1476Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16695 901..1476 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16695.2.1prot_P-wetherbeei_contig16695.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16695 901..1476 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16695.2.1

>prot_P-wetherbeei_contig16695.2.1 ID=prot_P-wetherbeei_contig16695.2.1|Name=mRNA_P-wetherbeei_contig16695.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=192bp
FATVSAGVWLLAGLQIRAVGEVAAATPALLAETLLLATPLPKLRGRGFNI
LIGLALAASIAQQAARPDLLKVWPENLYPDAALARIARENPQAGVFCSYH
WGGYLVFRGLQPYVHGMTTYFPAQRFTDYLAALQSPTAGKDLKSAGYGWV
LLAYNSFDDAHMGLAHRLADPASGWGLVYFDDASMLFAPSPT
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mRNA from alignment at P-wetherbeei_contig16695:901..1476-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16695.2.1 ID=mRNA_P-wetherbeei_contig16695.2.1|Name=mRNA_P-wetherbeei_contig16695.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=576bp|location=Sequence derived from alignment at P-wetherbeei_contig16695:901..1476- (Phaeothamnion wetherbeei SAG_119_79)
TTCGCAACCGTCTCCGCAGGAGTCTGGCTCCTGGCCGGCCTGCAAATCCG
GGCCGTCGGCGAGGTCGCAGCCGCCACCCCGGCGCTGCTGGCGGAAACCC
TCCTCCTTGCCACTCCCCTGCCAAAGCTCCGTGGCCGAGGCTTCAACATA
CTCATAGGCCTGGCTCTCGCTGCGAGCATTGCCCAACAGGCCGCGCGGCC
CGATCTGCTCAAGGTTTGGCCGGAGAATCTCTATCCCGACGCCGCCCTGG
CAAGAATCGCCCGAGAAAATCCCCAGGCCGGAGTGTTCTGCTCCTACCAC
TGGGGCGGATACCTGGTGTTCCGCGGCCTGCAGCCCTACGTCCACGGAAT
GACGACTTATTTCCCCGCGCAGCGCTTCACCGACTACCTGGCTGCCCTAC
AATCGCCCACGGCCGGGAAAGACCTCAAGTCCGCGGGCTACGGGTGGGTC
CTGCTGGCCTATAATTCTTTTGACGACGCTCATATGGGGCTGGCCCATCG
CCTCGCGGATCCGGCCAGCGGATGGGGTCTGGTCTACTTTGACGACGCTT
CCATGCTTTTTGCGCCCTCGCCAACG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16695:901..1476-

>mRNA_P-wetherbeei_contig16695.2.1 ID=mRNA_P-wetherbeei_contig16695.2.1|Name=mRNA_P-wetherbeei_contig16695.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=576bp|location=Sequence derived from alignment at P-wetherbeei_contig16695:901..1476- (Phaeothamnion wetherbeei SAG_119_79)
TTCGCAACCGTCTCCGCAGGAGTCTGGCTCCTGGCCGGCCTGCAAATCCG
GGCCGTCGGCGAGGTCGCAGCCGCCACCCCGGCGCTGCTGGCGGAAACCC
TCCTCCTTGCCACTCCCCTGCCAAAGCTCCGTGGCCGAGGCTTCAACATA
CTCATAGGCCTGGCTCTCGCTGCGAGCATTGCCCAACAGGCCGCGCGGCC
CGATCTGCTCAAGGTTTGGCCGGAGAATCTCTATCCCGACGCCGCCCTGG
CAAGAATCGCCCGAGAAAATCCCCAGGCCGGAGTGTTCTGCTCCTACCAC
TGGGGCGGATACCTGGTGTTCCGCGGCCTGCAGCCCTACGTCCACGGAAT
GACGACTTATTTCCCCGCGCAGCGCTTCACCGACTACCTGGCTGCCCTAC
AATCGCCCACGGCCGGGAAAGACCTCAAGTCCGCGGGCTACGGGTGGGTC
CTGCTGGCCTATAATTCTTTTGACGACGCTCATATGGGGCTGGCCCATCG
CCTCGCGGATCCGGCCAGCGGATGGGGTCTGGTCTACTTTGACGACGCTT
CCATGCTTTTTGCGCCCTCGCCAACG
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