mRNA_P-wetherbeei_contig1668.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1668.3.1
Unique NamemRNA_P-wetherbeei_contig1668.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1668.3.1 vs. uniprot
Match: D7FUK2_ECTSI (Alpha-ketoglutarate-dependent dioxygenase FTO n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUK2_ECTSI)

HSP 1 Score: 474 bits (1221), Expect = 9.300e-151
Identity = 317/710 (44.65%), Postives = 403/710 (56.76%), Query Frame = 3
Query:  132 RTNVKPLPFAGSSAQEPRDAFVVPGDKAFAQLLSTSYSGFVVDGPEELKPKVHEETRHAFAAMEAAGIFQTDVTQPFGLGTKCAKTFVTRTLVGEPGATYKYLGLRMFALPWSAT---------EASGLAADALISIGRLNDRLRRRAAAHLEALAASRAAA------GGDFRTGSCDFTLTLINRMEPSGERPDLKLEPLFKKDKASVSWHADSCLEHYSTIAVYHVTDAPV--------------GAEPDWRIALRVEHDVEGPISKNIKVPGAAAGGKAT-----PPVAVPLPSGAGYFLLDDFNHHHQHAVLSGESNRFASTHRVAKQEGHTFAYLSQRFAAVLGTAHRRSLKQWRAEQAVLTEIETEWLRQFYVQGSRHRDAHSWWHGPMEKCLTAWTQLERQTCSHLAALHGAAEAAAXXXXXXXXXXXEGSKGTSLG--KAERKALQRRRKHAEAVSALG-EQAYTAVAEALEDRAAKRRGWNQREVDPVFKTMPRDCRPLPLPLFTAVAPSPLPRLLDPVAADVRAWQRVFLGEWSVALPPLPAYLVAAAADMVMDAAIPPSAKDETAASNPTELAPNEADEAKAGEE---EGXXXXXTAAEADSAVPAT-VCSXXXXXXXXXXXXXXVMVG---LEMQQPWAQRLLAGEKTVETRAYPLPPGLVGRRIMIIQSDAGRDGVSALGNNVAAGAPGLTLVGSVV 2129
            R +VKP  F G     P D FV      F +++S  ++GF V+  E    KVHEE R AF  +E  G+F+ DVTQPFGLGTKCA T+VTRTL G+PG TYKYLGLRMF+ PW+ T           SG+   AL  +G LN++L+ R+   L A    +  A      G +F  GSC+F + LINRMEPS +RPDLKLEP F +D+ SVSWHADSCLEHYS+IAVYHVTD                     DWRIALRVE D EGP +  +K+  AA   K++     P VAV LPS + YFLLDDFNHHHQHAVL+G+S+R++STHRVAK++GH+F Y+S R   VLG  HRR+LKQW+ EQ  L E+E EW+RQFYVQG  H   HSWWHGP+++ L  W+ LE +T   +  L GAAE+    XXXXXXXXX           K E+KA Q+R K  +AV +LG   AY+A+A+AL DRA KRR W +RE D                           + L  +A  V  W ++F GE  V    +   +VA  A +                          AD    G +   +G     ++    S++P+  V S                 G   LEMQ PW++RLL GEKTVETR YPLP GLVGR I +++S  GRDGVS +G+ V A + GL++VG VV
Sbjct:   48 RISVKPPSFLGFRG--PSDRFVEESHPQFQEIVSKCFAGFHVEAAEAFDAKVHEEARQAFDGLEEGGVFRADVTQPFGLGTKCAVTYVTRTLAGDPGTTYKYLGLRMFSHPWTTTAKEADSDGGHGSGVP-SALRRVGLLNNKLKERSLRLLRARGGRKGKARREGGEGNEF--GSCEFNVALINRMEPSDDRPDLKLEPTFGQDRCSVSWHADSCLEHYSSIAVYHVTDPEAKNKNADADGGDGSPAVPADWRIALRVEPDAEGPSAGKLKL--AATEDKSSRVDRAPAVAVALPSRSAYFLLDDFNHHHQHAVLAGQSHRWSSTHRVAKKQGHSFDYISGRCRTVLGDGHRRTLKQWKTEQLTLAELEFEWIRQFYVQGRAHHALHSWWHGPLQELLRFWSLLEAKTAVVVNTLQGAAESRFDHXXXXXXXXXXXXXXXXXXDDKREKKARQKRAKQRQAVESLGGRDAYSAIADALGDRAEKRRQWAEREKD---------------------------KALSALADAVLEWGKIFSGEDGVRGGGI---VVAEEAGVGGGGRRVSGGCXXXXXXXXXXXPAGVADSGAGGVDNGPDGQEPCESSTSGGSSLPSPLVTSPAGTESARHAPPTPWETGRFALEMQAPWSRRLLDGEKTVETRGYPLPEGLVGRSIEVLESGRGRDGVSGVGDVVEAFSAGLSVVGRVV 720          
BLAST of mRNA_P-wetherbeei_contig1668.3.1 vs. uniprot
Match: A0A836C862_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C862_9STRA)

HSP 1 Score: 365 bits (937), Expect = 4.460e-109
Identity = 277/641 (43.21%), Postives = 337/641 (52.57%), Query Frame = 3
Query:  411 GEPGATYKYLGLRMFALPWSATE--ASGLAADALISIGRLNDRLRRRAAAHLEALAASRAAAGGDFRTGSCDFTLTLINRMEPSGERPDLKLEPLFKKDKASVSWHADSCLEHYSTIAVYHVTDAPVGAEPDWRIALRVEHDVEGPISKNIKVPGAAAGGKATPPVAVPLPSGAGYFLLDDFNHHHQHAVLSGESNRFASTHRVAKQ---------------------------------EGHTFAYLSQRFAAVLGT-AHRRSLKQWRAEQAVLTEIETEWLRQFYVQGSRHRDAHSWWHGPMEKCLTAWTQLERQTCSHLAALHGAAEAAAXXXXXXXXXXXEGSKGTSLGK--------------AERKALQRRRKHAEAVSALG-EQAYTAVAEALEDRAAKRRGWNQREVDPVFKTMPRDCRPLPLPLFTAVAPSPLPRLLDPVAADVRAWQRVFLGEWSVALPPLPAYLVAAAADMVMDAAIPPSAKDETAASNPTELAPNEADEAKAGEEEGXXXXXTAAEADSAVPATVCSXXXXXXXXXXXXXXVMVGLEMQQPWAQRLLAGEKTVETRAYPLPPGLVGRRIMIIQS------------------DAGRDGVSALGNNVAAGAPGLTLVGSV 2126
            G+PG TYKYLGLRMF+ PW A          DAL  +  L   L  RA  H                    +FT+ LINRMEP+  RPDLK EPL+ +++ SVSWHADSCLEH+STIAVYH TDA   A PDWRIALRVEHD EGP+    K PG   GG+  P VAV LPS + Y++L DFNHHHQHAVL+GE   +AST+RVAK+                                 EGHT A+L +R AA++   AH+R+LKQW A+QA+L+E+E EWLRQ++VQG+ H  AH+WW  P+E+    W  LE +T + LA L  AA    XXXXXXXXXXX                        A++KA QRR K    V ALG E  Y A+A AL+ R  +R+GW  RE D VFKT+PR  RPL +PLFTA APSPLP     +AA VRAW   F G  + ALP   A                                              XXXXX               XXXXXXX         VGLE+Q PWA+ LL+GEK VETRAY LPP L+GR++ +++S                         SA+ + V AGA GLT+VGSV
Sbjct:  135 GDPGTTYKYLGLRMFSHPWDARAELCEPAVGDALHKVKVLGAALAARARQHSSGXXXXXX--XXXXXXXXREFTVALINRMEPASLRPDLKAEPLYGRERLSVSWHADSCLEHFSTIAVYHQTDADPSAPPDWRIALRVEHDAEGPLGGKKKQPGGGRGGEMAPAVAVALPSCSAYYMLGDFNHHHQHAVLAGEWTHYASTYRVAKRYFKRYFKCTPPFLXXXXXXXXXXXXXXXXXXXREGHTLAHLEERCAAIIQQGAHKRTLKQWLAQQALLSELEFEWLRQWWVQGAAHARAHAWWAAPVERLTLHWRALEERTSTVLATLLRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQKKARQRRLKALATVDALGGENVYGAIAAALDQRWQQRQGWAARESDAVFKTVPRHARPLRIPLFTAAAPSPLPPDCAALAARVRAWADCFAGR-AAALPAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXAEDWAVADRVGLEVQAPWARMLLSGEKRVETRAYALPPELIGRKLALVESCGTAAXXXXXXXXXXXXXXXXXXVTSAVPDAVRAGAAGLTIVGSV 758          
BLAST of mRNA_P-wetherbeei_contig1668.3.1 vs. uniprot
Match: A0A7S3Q6H3_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q6H3_9STRA)

HSP 1 Score: 312 bits (799), Expect = 1.290e-90
Identity = 259/772 (33.55%), Postives = 343/772 (44.43%), Query Frame = 3
Query:  195 VVPGDKAFAQLLSTSYSGFVVDGPEELKPK-----------VHEETRHAFAAMEAAGIFQTDVTQPFGLGTKCAKTFVTRTLVGEPGATYKYLGLRMFALPWSA-------TEASGLAAD-------ALISIGRLNDRLRRRAAAHLEALAASRAAAGGDFRT---GSCDFTLTLINRMEPSGERPDLKLEPLFKKDKASVSWHADSCLEHYSTIAVYH--VTDAPVGAEP--------------------------------DWRIALRVEHDVEGPISKNIKVPGAAAGGKA--------TPPVAVPLPSGAGYFLLDDFNHHHQHAVL-----SGESNRFASTHRVAKQEGHTFAYLSQRFAAVLGTAHRRSLKQWRAEQAVLTEIETEWLRQFYVQGSRHR-DAHSWWHGPMEKCLTAWTQLERQTCSHLAALHGAAEAAAXXXXXXXXXXXEGSKGTSLGKAERKALQRRRKHAEAVSAL-------------GEQAYTAVAEALEDRAAKRRGWNQREVDPVFKTMPRDCRPLPLPLF-----------TAVAPSPL---PRLLDPVAADVRAWQRVFLGEWSVALPPLPAYLVAAAADMVMDAAIPPSAKDETAASNPTELAPNEADEAKAG-------EEEGXXXXXTAAEADSAVPAT---------------------------------VCSXXXXXXXXXXXXXXVMVGLEMQQPWAQRLLAGEKTVETRAYPLPPGLVGRRIMIIQSDAGRDGVSALGN 2081
            + P  ++F   + TSY GF VD P  L+ K            H + + A   M+  G+F+TDVTQPFGLGTKCAKT+VTR L+GE G TYKYLGLRMFA PW+        T   G ++D       AL +I  LN  L  R   HL+ L  +R            G   + + LINRM  +   PDLK EP   K K SVSWHADS LEH+S+IAVYH  V+D  +  E                                  W IA+RV HD EGP        GA+  G          +P VAV LP  + Y+LLDDFNHHHQH+VL     +    RFASTHR+ + EGH   ++ +R        H++  K WR+EQ +L+ IE+EW+RQFY+QG  H+ +   +W  PM + L  W QLE++T   L  L  AA A               + G    KAERK  ++++K    V  L              E  Y  +   LE+RA  R  W QRE + VFK M  +  PL +P               V  SPL    + L  +  +++   R FL      LP +   LVA+               D T +  P + + N  DE + G       E++         E    + AT                                                  V +GLEMQ PW ++LL G K +ETRAY LP  L+G++I I+QS  G+D VS L N
Sbjct:   91 IEPYKESFRTAIDTSYEGFAVDQPGGLEKKGRKKCESPSYFQHHDVQKALLKMDQHGLFRTDVTQPFGLGTKCAKTYVTRCLLGEEGTTYKYLGLRMFAHPWNIDIGNGTNTTNEGTSSDEGKEINTALKAISTLNQNLTGRTQTHLKGLEQTRQRRNYSSHPCIKGRAKYDVALINRMTNA---PDLKKEPTMGKGKCSVSWHADSSLEHFSSIAVYHTIVSDEDIAKEEAASNEEEISRSTQKQANKNSLPVSNEATELATKWSIAMRVAHDSEGP--------GASRRGSNIDSSVITDSPSVAVSLPPQSAYYLLDDFNHHHQHSVLVNNDVASAGVRFASTHRLLR-EGHNVNFMLERCRVTCSQFHKKGPKLWRSEQLLLSNIESEWIRQFYIQGEGHKKNLWKYWEQPMCQLLNYWGQLEKRTKQVLDLLTNAAFARCGEHEKNK------TNGEPPSKAERKQREKQKKALATVEDLIRRTAGGSNIDDPTEILYQPICVLLEERAKMRSLWTQRENEGVFKGMESEYWPLDVPFKFDHLDNAKSADKEVGISPLGGTSKQLTKICQELKMCARAFLSRDGNHLPAMKTVLVAS------------QQADSTRSPEPLQSSSN--DEKREGSVVKEKREKDKELLTKKIDEVKEPLAATQQXXXXXXXXXXXXXXXXXXXXXPAIPLIKRPRTTESDHRKDLDWKGWKSVKIGLEMQNPWGRKLLDGTKAIETRAYDLPKSLIGKKIDILQSKGGKDCVSGLSN 830          
BLAST of mRNA_P-wetherbeei_contig1668.3.1 vs. uniprot
Match: A0A7S2XRF9_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XRF9_9STRA)

HSP 1 Score: 295 bits (756), Expect = 9.570e-87
Identity = 230/616 (37.34%), Postives = 314/616 (50.97%), Query Frame = 3
Query:   30 KVKRSNEKAGRPVPKSAEIPSSATEKRSGAPTGTRTNVKPLPFA-GSSAQEPRDAFVVPGDKAFAQL----LSTSYSGFVVDG------------PEELKPKVHEETRHAFAAMEAAGIFQTDVTQPFGLGTKCAKTFVTRTLVGEPGATYKYLGLRMFALPWSAT--------EASGLAA-DALISIGRLNDRLRRRAAAHLEALAASRAAAGGDFRTGSCDFTLTLINRMEPSGERPDLKLEPLFKKDKASVSWHADSCLEHYSTIAVYHV--TDAPVGAEPD--------------WRIALRVEHDVEGPISKNIKVPGAAAGGKATPPVAVPLPSGAGYFLLDDFNHHHQHAVL-SGESN-------RFASTHRVAKQEGHTFAYLSQRFAAVLGTAHRRSLKQWRAEQAVLTEIETEWLRQFYVQGSRHRDAHSW--WHGPMEKCLTAWTQLERQTCSHLAALHGAAEAAAXXXXXXXXXXXEGSKGTSLGKAERKALQRRRKHAEAVSALGEQA---------------------YTAVAEALEDRAAKRRGWNQREVDPVFKTMPRDCRPLPLPLFTAVAPSPLPRLLDPVAADVRAWQRVF-LGEWSV 1655
            K K+ N++ G   P+S ++PS +T  +S  P        PL F  GS  + P   F+   + AF Q     L TSY GF VD              E+ +   H + R+A  +M+ AG F+TDVTQPFGLGTKCAKT+VTR L+GE G TYKYLGLRMFA PW  +        + SG+   +A+ ++  LN+ L  R++ HL  L   R   G +   G   F +TLINRME +    DLK E    + + SVSWHADS LE+YSTI VYH   +D+    E                W +ALRV H+ EGP      V   ++  K TP +A  LPSG+ Y+LLDDFNHHHQH VL SG+         RF+STHR+ + EGH   ++ +R   V    H++  K WR+EQ +LTEIE+EWLRQFY+QG  H+    W  W   +E     W +LE +T      L  AAEA              G+ G    K ERK  ++R+K   ++  + ++                      Y   A  L +R+  R  W +RE D VF+ M  D  P+PLPL +   P  L + +D    D++ W + F LG+ S+
Sbjct:   29 KAKKENQQRGLLHPQS-QVPSLSTSSKSQQPEQL-----PLAFPHGSDTRLPAKGFL-RDEGAFRQAYKLALDTSYEGFAVDPCPDEESVGSTIRQEQGEMFRHAKIRNALCSMQDAGFFRTDVTQPFGLGTKCAKTYVTRCLLGEAGTTYKYLGLRMFAHPWDGSAEKESINDKHSGMNIFEAVTTVSDLNETLTHRSSHHLSELDKKRRGRGAEPTKGRAGFDVTLINRMEGTS---DLKSEVTTGEGRCSVSWHADSSLENYSTIGVYHTIFSDSTKQNESSRTNNKKTTKSGSAQWSVALRVAHNSEGPNVGRRGVGIESSVVKETPAIATSLPSGSCYYLLDDFNHHHQHTVLASGDDGNEKDAGIRFSSTHRLLR-EGHNINFVIERCRVVCSNFHKKGPKIWRSEQLLLTEIESEWLRQFYIQGEGHKRL-LWKAWQELIETLSKYWQRLEDRTKQVSDLLQAAAEA--------RCGLVTGNDGAPSSKQERKRREKRKKALSSLQDIIQRGSEVDQAQTKSRGATIEAASIVYEPFAALLGERSTMRALWMKREKDQVFRRMENDYWPIPLPL-SFDKPDQLQQKID----DLKCWGKAFDLGDPSL 619          
BLAST of mRNA_P-wetherbeei_contig1668.3.1 vs. uniprot
Match: A0A448Z616_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z616_9STRA)

HSP 1 Score: 296 bits (759), Expect = 3.340e-85
Identity = 264/762 (34.65%), Postives = 337/762 (44.23%), Query Frame = 3
Query:  147 PLPFAGSSAQEPRDAFV---VPGDKAFAQLLSTSYSGFVVDGPEELK-------PKVHEE-TRHAFAAMEAAGIFQTDVTQPFGLGTKCAKTFVTRTLVGEPGATYKYLGLRMFALPWSATEASGLAAD-------------------------------ALISIGRLNDRLRRRAAAHLEALAASRAAAGGDFRTGSCDFTLTLINRMEPSGERPDLKL------EPLFKKD----------KASVSWHADSCLEHYSTIAVYHV---------------TDAPVGAEPDWRIALRVEHDVEGPISKNIKVPGAAAGG--KATPPVAVPLPSGAGYFLLDDFNHHHQHAVLS-GESN----RFASTHRVAKQEGHTFAYLSQRFAAVLGTAHRRSLKQWRAEQAVLTEIETEWLRQFYVQGSRHRDA--HSWWHGPMEKCLTAWTQLERQTCSHLAALHGAAEAAAXXXXXXXXXXXEGSKGTSLG--KAERKALQRRRKHAEAVSALGE------------QAYTAVAEALEDRAAKRRGWNQREVDPVFKTMPRDCRPLPLPLFTAVAPSPLPRLLDPVAADVRAWQRVFLGEWSVA-LPPLPAYLVAAAADMVM--------DAAIPPSAKDETAASNPTELAPNEADEAKAGEEEGXXXXXTAAEADSAVPATVCSXXXXXXXXXXXXXXVMVGLEMQQPWAQRLLAGEKTVETRAYPLPPGLVGRRIMIIQSDAGRDGVSALGNNVAAGAPGLTLV 2117
            P  F     + PR +F+    P   +F + LS  Y GF VD  +EL          +HEE    +   ME  GIF+TDVTQPFGLGTKCAKT+VTR LVGE G TYKYLGLRMFA PW  T+ S  AAD                                  +I  L   L  R A HL  L   R         G  +F + LINRME S   PDLK       E   K            K SVSWHADS LEHYSTIAVY                        E  W +ALRV H  EGP +   +          + TPP+AV LPSG+ Y+LLD      QH VL+ G++     R++ T R+ + + H       R  A +   H++  K WR+EQ +LTEIE+EW+RQFY+QG+ H       +W  PM++ L+ W+QLE +T   +  L  AAE              +   GT     KAERKA  RRRK    +  L              + Y   AE LE RAA R  W +RE D VF  MP DCRP+ +PL          R  D  AA   +      G    + LP  PA L   A  +          +AA+ P   D      P+     E  +    +           +AD                          GLE+QQPWA  +  G+K ++ R+Y LPP L+G+++MII+S +GR GVSALGN +     G T V
Sbjct:   47 PQEFPPHLPKPPRGSFLRDEAPYRDSFGEALSGPYEGFAVDDAKELSLPCEGDNTGIHEEIVLSSLETMEGEGIFRTDVTQPFGLGTKCAKTYVTRCLVGERGTTYKYLGLRMFAHPW--TDGSEEAADDRGGKKRKRRKRAQGCDAKVDQLNQAFDEAKTTSTIQELGKSLTMRTANHLRDLDQRRRQRRAPATRGRPNFDICLINRMESS---PDLKPYNFGVGEHNNKSSRSGKNEGNGTKTSVSWHADSSLEHYSTIAVYQTLLGGCRTGNDKSKSKATKKNSDEGKWWVALRVAHHSEGPQASQRRRGSTTEASIVEDTPPIAVSLPSGSAYYLLDXXXXXXQHTVLTTGDAATAGVRYSCTFRLLR-DSHNVRDWIDRGNAAIRQFHKKGPKLWRSEQLLLTEIESEWIRQFYIQGTGHHKLLWEPYWKNPMKELLSIWSQLEARTKQTMDLLRAAAEG---------KCGLDAGNGTETKPTKAERKARDRRRKALGTIRDLVSRIHIHNDDETVTELYLPFAELLEARAAMRELWGKREKDHVFHEMPPDCRPMEVPL----------RFGDQTAAHRSSGAAERDGSTGNSPLPASPAELRELAKQLARCGKAYREGNAALLPPPWDTDERKPPSPTPSIEKKDGSPRDHHAKPMDWPGWDADGTT----------------------FGLELQQPWAGFVANGKKAIDVRSYALPPALLGKKVMIIESASGRAGVSALGNRLRLTGGGTTRV 761          
BLAST of mRNA_P-wetherbeei_contig1668.3.1 vs. uniprot
Match: A0A1E7EVX5_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EVX5_9STRA)

HSP 1 Score: 293 bits (751), Expect = 3.860e-84
Identity = 248/741 (33.47%), Postives = 330/741 (44.53%), Query Frame = 3
Query:  201 PGDKAFAQLLSTSYSGFVVDG-------PEELKPKVHEETRHAFAAMEAAGIFQTDVTQPFGLGTKCAKTFVTRTLVGEPGATYKYLGLRMFALPWSATEASGLAADALISIGRLNDRLRR----------------------RAAAHLEALAASRAAAGGDFRT-GSCDFTLTLINRMEPSGERPDLKLEPL-FKKD----------------KASVSWHADSCLEHYSTIAVYHVTDAPVGAEPD-----------------------------WRIALRVEHDVEGPISKNIKVPGA---AAGGKATPPVAVPLPSGAGYFLLDDFNHHHQHAVLSGESNRFASTHRVAKQEGHTFAYLSQRFAAVLGTAHRRSLKQWRAEQAVLTEIETEWLRQFYVQGSRHRDA--HSWWHGPMEKCLTAWTQLERQTCSHLAALHGAAEAAAXXXXXXXXXXXEGSKGTSLGKAERKALQRRRKHA----EAVSALGE-----------QAYTAVAEALEDRAAKRRGWNQREVDPVFKTMPRDCRPLPLPLFTA------------VAPSPLPRLLDP---VAADVRAWQRVFLGEWSVALPPLPAYLVAAAADMVMDAAIPPSAKDETAASNPTELAPNEADEAKAGEEEGXXXXXTAAEADSAVPATVCSXXXXXXXXXXXXXXVMVGLEMQQPWAQRLLAGEKTVETRAYPLPPGLVG-RRIMIIQSDAGRDGVSALGNNV 2087
            P  K+F + L+TSY GFV D        P  +     +  +++  +M   GIF+TDVTQPFGLGTKCAKT+VTR LVG PG TYKYLGLRMFA PW+ +            + R ND  RR                      R   HL  L  SR      F T G   F + LINRME S +     L+P  F  D                K +VSWHADS LEH+S+IAVY      +G++ D                             W +ALRV H  EGP +   +  G     A  + TPP+AV LPSG+ Y+LLDDFNHHHQH VL+                G+T      R  + +   H++  + WR+EQ +LTEIE+EW+RQFY+QG  H      S+W  P+++ L+ W++LE +T   +  L  AAE              + +K      AERKA  RR+K      E VS + E           + Y  +AE LE+RA  R  W +RE D VF  +P D RP+ +P                VA SPLP   D    +AA +    R +    +  LPP                   P  K++                               AE DS    TV                 + GLE+Q PWA  ++ GEK +ETR+Y LPP L+G  ++MII+S +G+ GVS+L N+V
Sbjct:   69 PYRKSFREALTTSYEGFVFDDAATLMSQPTAINNVKEDVVQNSLESMSRGGIFRTDVTQPFGLGTKCAKTYVTRCLVGSPGTTYKYLGLRMFAHPWTTSTXXXXXXXXXXXMKR-NDNERRVCHTVVTNDAQTIQELALALTNRTKKHLRDLDESRRQRQPMFGTRGRPGFDICLINRMESSSD-----LKPYNFSGDSSTSSSNGKSGNKNGVKTTVSWHADSSLEHFSSIAVYQTI---LGSQKDESNNXXXXXXXXXXXXXXXXXXXXXXEGQWLVALRVAHHSEGPQASQQRRRGTNTETATVEETPPIAVNLPSGSCYYLLDDFNHHHQHTVLT---------------TGNTSTDWIDRGKSAIRQFHKKGSRIWRSEQLLLTEIESEWIRQFYIQGMGHHQLLWESYWKDPIQELLSIWSRLEHRTEQTIELLRAAAEGKCGVGMNTEKAADKPTK------AERKARDRRKKSLASIRELVSRINETPEEDGATAFTELYQPMAELLEERAEMRSKWEKREKDHVFHELPLDYRPMKVPFKFERTIDENNIGNEYVATSPLPNSPDKLKEIAAQLLQLGRAYRNGDAKQLPP-------------------PWKKEKP-------------------------KQDALAEGDS----TVDDHSKPLDWSGWNACAQLFGLELQHPWAAAIIDGEKVIETRSYSLPPSLIGGTKVMIIESSSGKAGVSSLCNHV 731          
BLAST of mRNA_P-wetherbeei_contig1668.3.1 vs. uniprot
Match: A0A7S2RU45_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RU45_9STRA)

HSP 1 Score: 287 bits (735), Expect = 6.190e-84
Identity = 206/526 (39.16%), Postives = 257/526 (48.86%), Query Frame = 3
Query:  108 RSGAPTGTRTNVK-PLPFAGSSAQEPRDAFVVPGDKAFAQLLSTSYSGFVVDGPEELKPKVHEETRHAFAAMEAAGIFQTDVTQPFGLGTKCAKTFVTRTLVGEPGATYKYLGLRMFALPWSA-TEASGLAAD---------ALISIGRLNDRLRRRAAAHLEALAASRAAAGGDFRTGSCDFTLTLINRMEPSGERPDLKLEPLFKKDKASVSWHADSCLEHYSTIAVYHVTDAP-VGAE--------------PDWRIALRVEHDVEGPISKNIKVPGAAAGGKATPPVAVPLPSGAGYFLLDDFNHHHQHAVLSGESNRFASTHRVAKQEGHTFAYLSQRFAAVL---------------GTAHRRS--LKQWRAEQAVLTEIETEWLRQFYVQGSRHRDAHSWWHGPMEKCLTAWTQLERQTCSHLAALHGAAEAAAXXXXXXXXXXXEGSKGTSLGKAERKALQRRRKHAEAVSALGEQAYTAVAEALEDRAAKRRGWNQREVDPVFKTMPRDCRPLPLPL 1556
            R  A T  R  V  PLP A         AF+VPGD  F ++LS SY GF ++    L P +H      F +++ AG+FQ DV Q  G     +KTFV RTLVG+PG TYKYLGLR+FA PW   T  S   A+         AL ++ RLN+ L  RA    E L A+          G   F LTLIN+MEP+     L+ EPLF   K SVSWHADS L+ +STIAVYH T+ P  GA                DWRI LRV  D                    TPPVA+P  SG  YFLLDDFNHHHQHAVLSG   R++STHRVA++EGHT+ Y+ +R   +L               GT   R+  L   R+EQ +L E+E EW+RQ+Y+QG  H D H WWH PM++ L           + +                        S   SL   ER                        A  LE R AKR+ W ++E D V+K++P  CRPLP+PL
Sbjct:   10 RGTAETSQRPEVSTPLPGA--------KAFLVPGDAEFHKVLSASYQGFQMETGPSLPPPLHAAFGGVFQSLDEAGVFQYDVVQAGG--KILSKTFVRRTLVGDPGITYKYLGLRIFAHPWCRETAPSKNPAEPNIEPPIPKALQALYRLNEELISRA----EGLLATEQQRRQLPAVGPTRFNLTLINQMEPTQVEKALRDEPLFGMGKCSVSWHADSGLQDFSTIAVYHSTEPPREGASRGGKSKWMKGNAHLDDWRIGLRVADD------------------DVTPPVALPTRSGDLYFLLDDFNHHHQHAVLSGSCRRYSSTHRVAREEGHTWKYIHRRCTKLLEGFASLRHSSTATSPGTRETRAVNLASARSEQVLLDEVEFEWVRQWYIQGQTHADLHVWWHEPMQQLLEXXXXXXXXXATAVXXXXXXXXXGV-------------SSAKSLAAVER-----------------------FASGLEQRVAKRKMWERKERDKVWKSLPATCRPLPVPL 467          
BLAST of mRNA_P-wetherbeei_contig1668.3.1 vs. uniprot
Match: D7FUI9_ECTSI (Alpha-ketoglutarate-dependent dioxygenase FTO n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUI9_ECTSI)

HSP 1 Score: 280 bits (715), Expect = 2.820e-80
Identity = 191/462 (41.34%), Postives = 239/462 (51.73%), Query Frame = 3
Query:  189 AFVVPGDKAFAQLLSTSYSGFVVDGPEELKPKVHEETRHAFAAMEAAGIFQTDVTQPFGLGTKCAKTFVTRTLVGEPGATYKYLGLRMFALPWSATEAS-------GLA--------------------------------------ADALISIGRLNDRLRRRAAAHLEALAASRAAAGGDFRTGSCDFTLTLINRMEPSGERPDLKLEPLFKKDKASVSWHADSCLEHYSTIAVYHVTDAPVGAEPDWRIALRV--EHDVEGP--------------------ISKNIKVPG-------AAAGGKA----------TPPVAVPLPSGAGYFLLDDFNHHHQHAVLSGESN-RFASTHRVAKQEGHTFAYLSQRF---------AAVLGTAHRRSLKQWRAEQAVLTEIETEWLRQFYVQGSRHRDAHSWWHGPMEKCLTAWTQLERQTC---SHLAALHG 1283
            +++ PGD  F   L  SY G   +    L   VH   R +F ++  AG+F  D  Q  G   + ++TFVTRTLVG+ G TYKYLGLR+FA PW   E+        GLA                                      AD L  +G L++ +R RA A L+        AGG+   GSC F LTLINRME SG + DLK +PLF   K SVSWHADSCL+ +STI VYH TD PV AEPDW IALRV  E  V G                       + +K  G       AA+  +A          TPP+ +PL SG  YFLLDDFNH H+HAV+SG S  R++STHRVA  +G+TF+++ +R          AA  G     +L Q RAEQA+LTE+E+EWL QF+VQG RH   H WW GPM   L  W +LER+T     HL +L G
Sbjct:  111 SWLSPGDPLFTPALDRSYRGVRHEPAGSLPQAVHSGFRQSFDSLHEAGLFLYDTVQAGG--KRLSRTFVTRTLVGDAGITYKYLGLRLFAHPWGLGESDFRKGPGDGLADALNDPCLADLFSKDGASSVRKSKDNLRGSRFDDNDRVADTLRKVGDLSEWMRLRAGAMLKEEVRE---AGGE--RGSCAFNLTLINRMECSGAKRDLKPDPLFSMGKCSVSWHADSCLQDFSTIGVYHCTD-PVPAEPDWGIALRVSTEARVGGDGXXXXXXXXXSNDEKTRRKEAERGLKPAGPKAVASVAASAAEAVPEKQGEQVLTPPLLIPLQSGDAYFLLDDFNHFHEHAVVSGSSTLRYSSTHRVADTDGNTFSHVQKRCEQALAGGGSAAAGGDDQILNLAQVRAEQALLTELESEWLNQFWVQGRRHASLHPWWRGPMALVLATWRELERRTSLTVQHLMSLRG 564          
BLAST of mRNA_P-wetherbeei_contig1668.3.1 vs. uniprot
Match: A0A7S4EG83_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG83_9STRA)

HSP 1 Score: 279 bits (713), Expect = 1.970e-78
Identity = 254/817 (31.09%), Postives = 345/817 (42.23%), Query Frame = 3
Query:   36 KRSNEKAGRPVPKSAEIPSSATEKRSGAPTGTRTNVKPLP--FAGSSAQEPRDAFV---VPGDKAFAQLLSTSYSGFVVD---------GPEELKPKVHEET-RHAFAAMEAAGIFQTDVTQPFGLGTKCAKTFVTRTLVGEPGATYKYLGLRMFALPWSATEASGLAADALIS----------------------------------------IGRLNDRLRRRAAAHLEALAASRAAAGGDFRTGSCDFTLTLINRMEPSGERPDLKLEPLFKKD---------------KASVSWHADSCLEHYSTIAVYHV-----------------------TDAPVGAEPDWRIALRVEHDVEGPISKNIK--VPGAAAGGKATPPVAVPLPSGAGYFLLDDFNHHHQHAVLS-GESN----RFASTHRVAKQEGHTFAYLSQRFAAVLGTAHRRSLKQWRAEQAVLTEIETEWLRQFYVQGSRHRDA--HSWWHGPMEKCLTAWTQLERQTCSHLAALHGAAEAAAXXXXXXXXXXXEGSKGTSLG-KAERKALQRRRKHAEAVSALGE-----------QAYTAVAEALEDRAAKRRGWNQREVDPVFKTMPRDCRPLPLPL-----FTAVAPS----------PLPRLLDPVAADVRAWQRVFLG----EWSVALPPLPAYLVAAAADMVMDAAIPPSAKDETAASNPTELAPNEADEAKAGEEEGXXXXXTAAEADSAVPATVCSXXXXXXXXXXXXXXVMVGLEMQQPWAQRLLAGEKTVETRAYPLPPGLVGRRIMIIQSDAGRDGVSALGNNV 2087
            K++ +K G+   K   +PS  T  +S +   +  +   LP  F     Q P+  F+    P   +F + L   Y GF  D          P E    + E T + +  +M   G F+TDVTQPFGLGTKCAKT+VTR LVG  G TYKYLGLRMFA PW+A ++S    D                                            I  L   L +R + H   L  +R         G  +F + LINRME S +         +K                 K SVSWHADS LEHYSTIAVY                         T     +   W +ALRV H  EGP +   +       +  + T P+AV LPSG+ Y+LLDDFNHHHQH VL+ G++     R++ T R+ + + H       R  A +   HR+  K WR+EQ +LTEIE+EW+RQFY+QGS H      ++W  P+++ L+ W+QLE +T   +     AAE              EG        KAERKA  RR+K    +  L             + Y   A+ LE+R   R  W +RE D VF  MP DCRP+  P      +    PS          PLP    PV     A Q V  G    + + AL P                  PP   ++  +S P E                                ++                 + GLE+Q PWA  ++ G+K +ETR+Y LPP L+G++IMI++S +G  G+S LGN V
Sbjct:   27 KKAEKKMGKSGSKRKALPSQQTANKSKSNKESNNDGVLLPQAFPSHLPQPPKGYFLRDEPPYRDSFKEALLGPYEGFAADDAAALNSFSSPTEGDGGIKERTIQSSLESMMRGGHFRTDVTQPFGLGTKCAKTYVTRCLVGAKGTTYKYLGLRMFAHPWTAGKSSNEINDNTDGPINSNVNKRRKRTNYDRSGRKNNPDEGDGCHDVVDENASIIHELGKNLTKRVSKHARNLDEARRQRRAPPTRGRLNFDICLINRMESSSDLKPYVFGGEYKGTNGSQSSRNGDDNNGTKTSVSWHADSSLEHYSTIAVYQTLLGGYKIGHHNKKKDRYNGQEIKTKENEDSTGQWWVALRVAHHSEGPQASQRRRGTNTETSIVEETSPIAVSLPSGSAYYLLDDFNHHHQHTVLTTGDAATAGIRYSCTFRLLR-DSHNVRDWIDRGNAAIRQFHRKGPKIWRSEQLLLTEIESEWIRQFYIQGSGHHKLLWETYWKNPIKELLSIWSQLEGRTKQTMDMFRAAAEGKCGADGTSNNDNNEGKAVEKKPTKAERKARDRRKKALGTIQELVSRININDDNILTELYQPFAKLLEERGEMRELWGKREKDHVFHEMPPDCRPMDAPFRFEEQYAVHDPSGVGSDLFGKSPLPG--SPVKLKEMARQLVQCGRAYQQSNFALIP------------------PPWMTNKPKSSRPIET------------------------------ESLDRHTKPMNWSGWGASENIFGLELQHPWAGAVVDGKKLIETRSYTLPPSLIGKKIMIVESTSGEAGISTLGNCV 792          
BLAST of mRNA_P-wetherbeei_contig1668.3.1 vs. uniprot
Match: A0A7R9U9D2_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9D2_9STRA)

HSP 1 Score: 258 bits (659), Expect = 1.100e-73
Identity = 172/467 (36.83%), Postives = 242/467 (51.82%), Query Frame = 3
Query:  225 LLSTSYSGFVVDGPEELKPKVHEETRHAFAAMEAAGIFQTDVTQPFGLGTKCAKTFVTRTLVGEPGATYKYLGLRMFALPWSA----TEASGLAADALISIGRLNDRLRRRAAAHLEALAASRAAAGGDFRTGSCDFTLTLINRMEPSGERPDLKLEPLFKKD------KASVSWHADSCLEHYSTIAVYHVTDAPVGAEPD--------WRIALRVEHDVEGP-ISKNIKVPGAAAGGKATPPVAVPLPSGAGYFLLDDFNHHHQHAVLSGESNRFASTHRVAKQEGHTFAYLSQRFAAVLGTAHRRSLKQWRAEQAVLTEIETEWLRQFYVQGSRHRDAH-SWWHGPMEKCLTAWTQLERQTCSHLAALHGAAEAAAXXXXXXXXXXXEGSKGTSLGKAERKAL----QRRRKHAEAVSALG-EQAYTAVAEALEDRAAKRRGWNQREVDPVFKTMPRDCRPLPL 1550
            +    + GFV + P  + P+VH  TR A   ++  G +  DVTQP GL ++  +TFV+R LVG+ G TYKYL LRMF +P+      +  +    +AL  + RLN  LRRRA    E L A R    G     S DF + LINRM    ER +L+ +   K+D      +  VSWHADS L H+STIAVYH+ +      P         W++ALR + D EGP   ++ +       G   P  A   PSG+ Y++L DFNHHHQHAVL+G   R ++THRV + EGH    +      VL T  ++ LKQW  E  +L E+E EWLRQ+Y+QG++H +    +W   +E+    W  LE +    +  L  A+                       G+ ++ AL    +R RKHAEAV  +G  +A+  + E L  R  KR GW  R  D +++ +P + RPLPL
Sbjct:   20 VADADFKGFVREEPRWVPPEVHLRTRRALLTLKELGYYIYDVTQPLGLFSELKRTFVSRILVGKEGYTYKYLNLRMFGIPFEGAALDSHPNSRLREALRCLKRLNSTLRRRA----EELRAQR----GLGEEVSADFNVILINRMGSEDERDELQRKRSLKRDAELGNARVRVSWHADSSLVHFSTIAVYHLLNPEDEVSPQKANQRDYHWKVALRRQIDAEGPHAGRSRRAGNEDLSGGTRPRTASLGPSGSTYYMLGDFNHHHQHAVLAGACERISTTHRVGRSEGHQAQLVIDAARKVLATP-KKCLKQWARESRMLDEVEFEWLRQWYIQGAQHAEQRLPFWGKYIEELEAIWRDLEDKEALKVGMLRNASRVI-------------------RGRRQQGALASFSRRERKHAEAVDQMGGSKAFAQMEEILRARQRKRDGWAARAADKLWEALPEEMRPLPL 458          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1668.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUK2_ECTSI9.300e-15144.65Alpha-ketoglutarate-dependent dioxygenase FTO n=2 ... [more]
A0A836C862_9STRA4.460e-10943.21Alpha-ketoglutarate-dependent dioxygenase FTO n=1 ... [more]
A0A7S3Q6H3_9STRA1.290e-9033.55Alpha-ketoglutarate-dependent dioxygenase FTO n=2 ... [more]
A0A7S2XRF9_9STRA9.570e-8737.34Alpha-ketoglutarate-dependent dioxygenase FTO (Fra... [more]
A0A448Z616_9STRA3.340e-8534.65Alpha-ketoglutarate-dependent dioxygenase FTO n=1 ... [more]
A0A1E7EVX5_9STRA3.860e-8433.47Alpha-ketoglutarate-dependent dioxygenase FTO n=1 ... [more]
A0A7S2RU45_9STRA6.190e-8439.16Alpha-ketoglutarate-dependent dioxygenase FTO n=1 ... [more]
D7FUI9_ECTSI2.820e-8041.34Alpha-ketoglutarate-dependent dioxygenase FTO n=2 ... [more]
A0A7S4EG83_9STRA1.970e-7831.09Alpha-ketoglutarate-dependent dioxygenase FTO n=1 ... [more]
A0A7R9U9D2_9STRA1.100e-7336.83Alpha-ketoglutarate-dependent dioxygenase FTO n=1 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1668contigP-wetherbeei_contig1668:3945..6803 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FUK2
Preferred nameFTO
PFAMsFTO_CTD,FTO_NTD
Model size2129
Max annot lvl2759|Eukaryota
KEGG koko:K19469
Hectar predicted targeting categoryother localisation
GOsGO:0001659,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007275,GO:0008150,GO:0008152,GO:0008198,GO:0009451,GO:0009888,GO:0009987,GO:0010883,GO:0016070,GO:0016491,GO:0016604,GO:0016607,GO:0016705,GO:0016706,GO:0031974,GO:0031981,GO:0032451,GO:0032501,GO:0032502,GO:0032879,GO:0033554,GO:0034641,GO:0035510,GO:0035511,GO:0035513,GO:0035514,GO:0035515,GO:0035516,GO:0035552,GO:0035553,GO:0040008,GO:0040014,GO:0042127,GO:0042245,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043576,GO:0043734,GO:0044057,GO:0044065,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044728,GO:0045595,GO:0045598,GO:0046483,GO:0046872,GO:0046914,GO:0048513,GO:0048638,GO:0048731,GO:0048856,GO:0048871,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051213,GO:0051239,GO:0051716,GO:0055114,GO:0060612,GO:0061448,GO:0065007,GO:0065008,GO:0070013,GO:0070344,GO:0070350,GO:0070988,GO:0070989,GO:0071704,GO:0080111,GO:0090304,GO:0090335,GO:0140097,GO:0140098,GO:1901360,GO:1905952,GO:1990931
Exons5
Evalue1.22e-151
EggNOG OGs28IRR@1|root,2QR31@2759|Eukaryota
Ec32 ortholog descriptionAlpha-ketoglutarate-dependent dioxygenase FTO, catalytic domain
Ec32 orthologEc-02_002940.1
EC1.14.11.53
DescriptionRNA N6-methyladenosine dioxygenase activity
Cds size2106
COG categoryS
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1668.3.1prot_P-wetherbeei_contig1668.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1668 3968..6803 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186094.0981154-UTR-P-wetherbeei_contig1668:3944..39671683186094.0981154-UTR-P-wetherbeei_contig1668:3944..3967Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1668 3945..3967 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186094.1197996-CDS-P-wetherbeei_contig1668:3967..42281683186094.1197996-CDS-P-wetherbeei_contig1668:3967..4228Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1668 3968..4228 +
1683186094.1326168-CDS-P-wetherbeei_contig1668:4433..45261683186094.1326168-CDS-P-wetherbeei_contig1668:4433..4526Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1668 4434..4526 +
1683186094.1470344-CDS-P-wetherbeei_contig1668:4621..49701683186094.1470344-CDS-P-wetherbeei_contig1668:4621..4970Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1668 4622..4970 +
1683186094.157423-CDS-P-wetherbeei_contig1668:5170..53711683186094.157423-CDS-P-wetherbeei_contig1668:5170..5371Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1668 5171..5371 +
1683186094.169109-CDS-P-wetherbeei_contig1668:5601..68031683186094.169109-CDS-P-wetherbeei_contig1668:5601..6803Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1668 5602..6803 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1668.3.1

>prot_P-wetherbeei_contig1668.3.1 ID=prot_P-wetherbeei_contig1668.3.1|Name=mRNA_P-wetherbeei_contig1668.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=702bp
MGKVKRSNEKAGRPVPKSAEIPSSATEKRSGAPTGTRTNVKPLPFAGSSA
QEPRDAFVVPGDKAFAQLLSTSYSGFVVDGPEELKPKVHEETRHAFAAME
AAGIFQTDVTQPFGLGTKCAKTFVTRTLVGEPGATYKYLGLRMFALPWSA
TEASGLAADALISIGRLNDRLRRRAAAHLEALAASRAAAGGDFRTGSCDF
TLTLINRMEPSGERPDLKLEPLFKKDKASVSWHADSCLEHYSTIAVYHVT
DAPVGAEPDWRIALRVEHDVEGPISKNIKVPGAAAGGKATPPVAVPLPSG
AGYFLLDDFNHHHQHAVLSGESNRFASTHRVAKQEGHTFAYLSQRFAAVL
GTAHRRSLKQWRAEQAVLTEIETEWLRQFYVQGSRHRDAHSWWHGPMEKC
LTAWTQLERQTCSHLAALHGAAEAAAARRDGSGGGGGEGSKGTSLGKAER
KALQRRRKHAEAVSALGEQAYTAVAEALEDRAAKRRGWNQREVDPVFKTM
PRDCRPLPLPLFTAVAPSPLPRLLDPVAADVRAWQRVFLGEWSVALPPLP
AYLVAAAADMVMDAAIPPSAKDETAASNPTELAPNEADEAKAGEEEGTEE
KGTAAEADSAVPATVCSASSSVPALDWSASSVMVGLEMQQPWAQRLLAGE
KTVETRAYPLPPGLVGRRIMIIQSDAGRDGVSALGNNVAAGAPGLTLVGS
VV
back to top

mRNA from alignment at P-wetherbeei_contig1668:3945..6803+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1668.3.1 ID=mRNA_P-wetherbeei_contig1668.3.1|Name=mRNA_P-wetherbeei_contig1668.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2859bp|location=Sequence derived from alignment at P-wetherbeei_contig1668:3945..6803+ (Phaeothamnion wetherbeei SAG_119_79)
CAGCACTCTCCAGTGCAGCTGCAATGGGCAAGGTGAAGCGCAGCAACGAG AAGGCTGGCAGGCCAGTGCCGAAATCTGCCGAAATACCCTCTTCGGCAAC TGAGAAAAGGAGCGGTGCTCCTACTGGGACCCGAACAAACGTCAAGCCGC TGCCTTTCGCTGGCTCAAGCGCTCAAGAGCCACGAGACGCATTCGTCGTC CCGGGAGACAAGGCGTTTGCCCAGTTGCTCTCCACTTCGTACAGTGGCTT CGTGGTGGATGGCCCAGAGGAGCTCAAGCCAAAGGTAATAATGTGTTTTC ACGCAGACTTCGTTTTGCGTGGACTCGCTTTCGTGAAGTCGCTTTCGTGA GCTTGAAATAGCTCTTATCATACCATTCGCATGAAATGTGTCGTGCGGTG GAAGCTGGTTGCGGTCATTTATCGTCTTTAAAAGCAGCTAGAAGGTTCCT GACTGTCCTTTTTGCCCTCTTGGCATCTCTGCTCTTCAGGTCCACGAAGA AACGCGTCATGCGTTCGCGGCGATGGAGGCCGCCGGTATTTTTCAAACAG ACGTCACGCAACCTTTTGGCTTGGGAACGAAGGTATGCTGCACCTTGTCT CATCGCTTCCTTTTGCCCCCTTGGCCTCGAAAGGCTGACAACTCTGTCTC CTCCCGAAAATTGCTGGCCCGCCGCAGTGCGCCAAGACGTTTGTCACGCG TACGCTGGTCGGCGAACCGGGCGCCACCTACAAATACCTTGGCCTGCGGA TGTTCGCCCTCCCGTGGTCAGCGACAGAGGCTTCGGGCCTGGCAGCTGAC GCGCTCATCTCCATCGGGCGGCTCAACGACCGGCTCCGGCGGCGCGCCGC CGCCCATCTTGAGGCGCTGGCGGCATCGCGCGCTGCAGCGGGCGGGGATT TTCGCACGGGGAGCTGCGACTTTACGTTGACGCTCATAAACCGCATGGAG CCATCGGGGGAGCGTCCCGACTTGAAGCTGGAGCCGCTTTTCAAGAAGGA CAAAGCATCCGTCTCGTGGCATGCAGGTGCATCTTCTTTGTGCGTCCTCT CTAGTAAATGAAGTGTTTTGCCTTTTGTTAAGCTCCTCTGGCTGCGGTTT AGTCTCCCTGGTGCGACTTCTTATCAAATGTTCTCAAAACTAAGGGATCT CTTGAGGTCTACGATACCATATTAATACAGCACAACTCTGCCCCATTGTT GGATTTGTGGTGCGGTGCTGTTCCAGACTCGTGCCTCGAGCACTACTCAA CGATCGCCGTCTACCACGTCACGGACGCCCCGGTTGGCGCGGAGCCCGAC TGGCGGATCGCGCTGCGGGTGGAGCACGACGTCGAAGGGCCCATCTCCAA GAATATCAAGGTTCCGGGCGCAGCGGCGGGCGGCAAGGCGACGCCTCCCG TCGCGGTTCCCCTCCCGAGCGGCGCAGGTAAAAGGCGGCGGGGCGGCGCG GCTGAGTTTATCGGAGGATTGCAGACCCAAATATCAGCGAGGGGAACCGA CTTGGCTGTCTTTCTGATCCCGTGCAGCTTGAAGGACTGTATCGAACCCT AAATCAAACGTTCTCCAATTTATTCTTCATCCTCCGCGTCCCCCTCTTTA ATCATTCTTTCATCGGCTTTTTTCCTCGTGCGGACATGTTAAACGCGAAA TGAGCAGGTTACTTCTTGCTCGATGACTTCAACCACCACCACCAGCACGC CGTCCTCTCCGGCGAATCGAACCGCTTCGCGAGCACCCACCGCGTCGCCA AGCAGGAGGGGCACACCTTCGCCTACCTCTCGCAGCGCTTTGCGGCGGTG CTCGGCACGGCCCACCGCCGCAGCCTCAAGCAGTGGCGGGCGGAGCAGGC GGTCCTGACGGAGATCGAGACGGAGTGGCTGCGGCAGTTCTACGTCCAAG GCAGCCGCCATCGCGACGCGCACAGCTGGTGGCACGGCCCCATGGAGAAG TGCCTCACCGCCTGGACCCAGCTGGAGCGCCAGACGTGCAGCCACCTCGC CGCGCTCCACGGCGCTGCCGAGGCCGCCGCGGCGAGGCGGGACGGCAGCG GCGGCGGCGGCGGCGAAGGCAGCAAGGGCACATCGCTGGGCAAGGCCGAG CGCAAGGCGCTGCAGCGGCGCCGGAAGCACGCCGAGGCGGTCTCTGCGCT GGGAGAGCAGGCGTACACGGCCGTGGCGGAGGCGTTGGAGGACCGCGCCG CCAAGCGCCGCGGGTGGAACCAGAGGGAGGTCGACCCGGTGTTCAAGACG ATGCCGCGGGACTGCCGTCCACTGCCGCTGCCACTGTTTACAGCCGTGGC GCCGTCGCCACTGCCCCGCCTGCTGGACCCGGTCGCTGCCGACGTCCGCG CATGGCAGCGTGTCTTCCTGGGCGAGTGGAGCGTAGCGCTCCCGCCGCTG CCAGCTTACCTCGTGGCCGCGGCTGCTGACATGGTGATGGACGCGGCCAT ACCGCCGTCGGCAAAGGACGAAACGGCGGCCTCAAACCCAACCGAGCTCG CTCCGAACGAGGCAGACGAAGCCAAGGCGGGCGAAGAGGAGGGAACGGAA GAAAAGGGCACAGCGGCGGAGGCCGATTCGGCGGTACCTGCGACAGTGTG CTCCGCGTCTTCCTCGGTGCCGGCGTTGGATTGGAGCGCCAGCTCCGTGA TGGTGGGACTAGAAATGCAGCAGCCGTGGGCGCAGCGATTGCTGGCGGGC GAGAAGACGGTCGAGACGCGGGCGTATCCCCTGCCGCCTGGGCTTGTCGG ACGCCGCATAATGATCATCCAGTCCGACGCTGGCCGCGACGGGGTATCTG CGCTCGGGAACAACGTAGCTGCCGGCGCGCCGGGGCTCACGCTCGTGGGT TCGGTCGTC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1668:3945..6803+

>mRNA_P-wetherbeei_contig1668.3.1 ID=mRNA_P-wetherbeei_contig1668.3.1|Name=mRNA_P-wetherbeei_contig1668.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2106bp|location=Sequence derived from alignment at P-wetherbeei_contig1668:3945..6803+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGCAAGGTGAAGCGCAGCAACGAGAAGGCTGGCAGGCCAGTGCCGAA
ATCTGCCGAAATACCCTCTTCGGCAACTGAGAAAAGGAGCGGTGCTCCTA
CTGGGACCCGAACAAACGTCAAGCCGCTGCCTTTCGCTGGCTCAAGCGCT
CAAGAGCCACGAGACGCATTCGTCGTCCCGGGAGACAAGGCGTTTGCCCA
GTTGCTCTCCACTTCGTACAGTGGCTTCGTGGTGGATGGCCCAGAGGAGC
TCAAGCCAAAGGTCCACGAAGAAACGCGTCATGCGTTCGCGGCGATGGAG
GCCGCCGGTATTTTTCAAACAGACGTCACGCAACCTTTTGGCTTGGGAAC
GAAGTGCGCCAAGACGTTTGTCACGCGTACGCTGGTCGGCGAACCGGGCG
CCACCTACAAATACCTTGGCCTGCGGATGTTCGCCCTCCCGTGGTCAGCG
ACAGAGGCTTCGGGCCTGGCAGCTGACGCGCTCATCTCCATCGGGCGGCT
CAACGACCGGCTCCGGCGGCGCGCCGCCGCCCATCTTGAGGCGCTGGCGG
CATCGCGCGCTGCAGCGGGCGGGGATTTTCGCACGGGGAGCTGCGACTTT
ACGTTGACGCTCATAAACCGCATGGAGCCATCGGGGGAGCGTCCCGACTT
GAAGCTGGAGCCGCTTTTCAAGAAGGACAAAGCATCCGTCTCGTGGCATG
CAGACTCGTGCCTCGAGCACTACTCAACGATCGCCGTCTACCACGTCACG
GACGCCCCGGTTGGCGCGGAGCCCGACTGGCGGATCGCGCTGCGGGTGGA
GCACGACGTCGAAGGGCCCATCTCCAAGAATATCAAGGTTCCGGGCGCAG
CGGCGGGCGGCAAGGCGACGCCTCCCGTCGCGGTTCCCCTCCCGAGCGGC
GCAGGTTACTTCTTGCTCGATGACTTCAACCACCACCACCAGCACGCCGT
CCTCTCCGGCGAATCGAACCGCTTCGCGAGCACCCACCGCGTCGCCAAGC
AGGAGGGGCACACCTTCGCCTACCTCTCGCAGCGCTTTGCGGCGGTGCTC
GGCACGGCCCACCGCCGCAGCCTCAAGCAGTGGCGGGCGGAGCAGGCGGT
CCTGACGGAGATCGAGACGGAGTGGCTGCGGCAGTTCTACGTCCAAGGCA
GCCGCCATCGCGACGCGCACAGCTGGTGGCACGGCCCCATGGAGAAGTGC
CTCACCGCCTGGACCCAGCTGGAGCGCCAGACGTGCAGCCACCTCGCCGC
GCTCCACGGCGCTGCCGAGGCCGCCGCGGCGAGGCGGGACGGCAGCGGCG
GCGGCGGCGGCGAAGGCAGCAAGGGCACATCGCTGGGCAAGGCCGAGCGC
AAGGCGCTGCAGCGGCGCCGGAAGCACGCCGAGGCGGTCTCTGCGCTGGG
AGAGCAGGCGTACACGGCCGTGGCGGAGGCGTTGGAGGACCGCGCCGCCA
AGCGCCGCGGGTGGAACCAGAGGGAGGTCGACCCGGTGTTCAAGACGATG
CCGCGGGACTGCCGTCCACTGCCGCTGCCACTGTTTACAGCCGTGGCGCC
GTCGCCACTGCCCCGCCTGCTGGACCCGGTCGCTGCCGACGTCCGCGCAT
GGCAGCGTGTCTTCCTGGGCGAGTGGAGCGTAGCGCTCCCGCCGCTGCCA
GCTTACCTCGTGGCCGCGGCTGCTGACATGGTGATGGACGCGGCCATACC
GCCGTCGGCAAAGGACGAAACGGCGGCCTCAAACCCAACCGAGCTCGCTC
CGAACGAGGCAGACGAAGCCAAGGCGGGCGAAGAGGAGGGAACGGAAGAA
AAGGGCACAGCGGCGGAGGCCGATTCGGCGGTACCTGCGACAGTGTGCTC
CGCGTCTTCCTCGGTGCCGGCGTTGGATTGGAGCGCCAGCTCCGTGATGG
TGGGACTAGAAATGCAGCAGCCGTGGGCGCAGCGATTGCTGGCGGGCGAG
AAGACGGTCGAGACGCGGGCGTATCCCCTGCCGCCTGGGCTTGTCGGACG
CCGCATAATGATCATCCAGTCCGACGCTGGCCGCGACGGGGTATCTGCGC
TCGGGAACAACGTAGCTGCCGGCGCGCCGGGGCTCACGCTCGTGGGTTCG
GTCGTC
back to top