mRNA_P-wetherbeei_contig1668.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1668.2.1 vs. uniprot
Match: A0A6V1RZL7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RZL7_HETAK) HSP 1 Score: 144 bits (364), Expect = 1.870e-40 Identity = 68/155 (43.87%), Postives = 102/155 (65.81%), Query Frame = 3
Query: 81 MAHNLCWKHFSKNQIEELERSLEPLQCKRLLGQFLGLGKGGDGLDELEEVVLDFHFYNYAFCKERGFNALKTSTFLSIAKEIFDKDMAS--SVQSMELSFLRFKELLLTHSVQRPPWSIGVFGAGDVRDVVDYSLTSYFRHFGLYKALFGASVDL 539
M ++ WKHF++ Q+ ELE + +P++CK LL +L + G D ++++LDFHFYNYAFCK+ GF K STFLSI K+ DKD + +V +++ SF + K+ LL H ++RPPWS+G+F D++ + D+ L Y+R F LYK LF V +
Sbjct: 1 MTDSVLWKHFTEAQLRELEAARDPVECKGLLKSYLKIEDAGFDRDR-QDILLDFHFYNYAFCKKLGFGPTKISTFLSIMKDTIDKDFSQHDAVNTIKASFEQLKKTLLMHCIERPPWSVGIFQPEDLQLLSDFVLNGYYRQFRLYKYLFTRRVQV 154
BLAST of mRNA_P-wetherbeei_contig1668.2.1 vs. uniprot
Match: A0A7S2SS91_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS91_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.570e-35 Identity = 70/156 (44.87%), Postives = 96/156 (61.54%), Query Frame = 3
Query: 81 MAHNLCWKHFSKNQIEELERSLEPLQCKRLLGQFLGLGKGGDGLDELEEVVLDFHFYNYAFCKERGFNALKTSTFLSIAKEIFDKDMASSVQS--MELSFLRFKELLLTHSVQRPPWSIGVFGAGDVRDVVDYSLTSYFRHFGLYKALFGASVDLS 542
MA +L + +E L + EP K+LL + LG+ D E +EVV +F+FY YAFCKE GF+A KTSTF+SIAK F D + S M+ SF RFKEL+L+H+V R PW++ VF DV ++ Y L SYFRHF +YK +F + ++
Sbjct: 1 MAESLEFHDLPSGTVELLHVTYEPAAVKKLLRENLGVEDDRDLSAEQKEVVEEFYFYCYAFCKESGFDASKTSTFMSIAKATFHDDRSRDEFSCGMKQSFARFKELVLSHAVNRSPWAVRVFSEDDVARIISYMLNSYFRHFKMYKLIFTRKLQVT 156
BLAST of mRNA_P-wetherbeei_contig1668.2.1 vs. uniprot
Match: A0A835YZX1_9STRA (Flagellar C1a complex subunit C1a-32-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZX1_9STRA) HSP 1 Score: 119 bits (298), Expect = 4.560e-31 Identity = 52/110 (47.27%), Postives = 77/110 (70.00%), Query Frame = 3
Query: 213 DELEEVVLDFHFYNYAFCKERGFNALKTSTFLSIAKEIFDKDMASS--VQSMELSFLRFKELLLTHSVQRPPWSIGVFGAGDVRDVVDYSLTSYFRHFGLYKALFGASVD 536
DE EV++DFH YNYAFCKE+ F+ KTST++SI ++ +D++ V + SF RF++L+L H V+RPPWS+G+F DV + +Y + SY+RH+ +YK LF A V+
Sbjct: 14 DEKTEVLVDFHLYNYAFCKEQRFDTQKTSTYMSIMTDVLKQDLSQDDPVSGQQASFDRFRDLILRHCVERPPWSVGIFTLEDVAGITEYVVNSYYRHYRIYKHLFTARVE 123
BLAST of mRNA_P-wetherbeei_contig1668.2.1 vs. uniprot
Match: W2PIE1_PHYPN (Uncharacterized protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PIE1_PHYPN) HSP 1 Score: 114 bits (286), Expect = 1.230e-28 Identity = 58/148 (39.19%), Postives = 85/148 (57.43%), Query Frame = 3
Query: 81 MAHNLCWKHFSKNQIEELERSLEPLQCKRLLGQFLGLGKGGDGLDELEEVVLDFHFYNYAFCKERGFNALKTSTFLSIAKEIFDKDMAS-SVQSMELSFLRFKELLLTHSVQRPPWSIGVFGAGDVRDVVDYSLTSYFRHFGLYKALF 521
M + WKH S+ ++ +L CK L + L D DE + +LDFH +NY+FC++R F +TS FL I + + +D AS S ++ SF F+ +LLTHSV R P S+G+F +V +VDY SY+RHF LYK ++
Sbjct: 1 MTEAIVWKHASERELAQLATRHSVDDCKSALAEIFEL----DLSDEKQRFLLDFHLHNYSFCRQRHFELNQTSVFLGICQTLMKRDFASDSTTDLKSSFEFFQAMLLTHSVNRSPKSVGIFSREEVATIVDYVANSYYRHFQLYKCIY 144
BLAST of mRNA_P-wetherbeei_contig1668.2.1 vs. uniprot
Match: A0A6A3P3Y5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3P3Y5_9STRA) HSP 1 Score: 103 bits (256), Expect = 4.230e-24 Identity = 57/152 (37.50%), Postives = 83/152 (54.61%), Query Frame = 3
Query: 81 MAHNLCWKHFSKNQIEELERSLEPLQCKRLLGQFLGLGKGGDGLDELEEVVLDFHFYNYAFCKE----RGFNALKTSTFLSIAKEIFDKDMA-SSVQSMELSFLRFKELLLTHSVQRPPWSIGVFGAGDVRDVVDYSLTSYFRHFGLYKALF 521
M + WKH ++N++ +L CK L + L D DE + +LDFH +NY++ R F +TS FL I + + +D A S ++ SF F+E+LLTHSV R P S+GVF +V +VDY SY+RHF LYK ++
Sbjct: 1 MTEAIVWKHATENELAKLATRHSVDDCKSALAEIFDL----DFSDEKQSFLLDFHLHNYSYPSPTIHGRHFQLNQTSVFLGICQTLMRRDFARESTTDLKSSFDYFQEILLTHSVNRSPKSVGVFSREEVTAIVDYVTNSYYRHFQLYKCIY 148
BLAST of mRNA_P-wetherbeei_contig1668.2.1 vs. uniprot
Match: A0A7S1Q3Y6_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1Q3Y6_ALECA) HSP 1 Score: 104 bits (259), Expect = 1.030e-23 Identity = 54/149 (36.24%), Postives = 90/149 (60.40%), Query Frame = 3
Query: 93 LCWKHFSKNQIEELERSLEPLQCKRLLGQFLGLGKGGDGLDELEEVVLDFHFYNYAFCKERGFNALKTSTFLSIAKEIFDKDMASSVQSMELSFLRFKELLLTHSVQRPPWSIGVFGAGDVRDVVDYSLTSYFRHFGLYKALFGASVDL 539
L + S+ + + + + K+LL + + + +GL E++ D H++NY+FC +GF A+KTSTFLSI K + ++ ++ + + E + FK+ LL HSV+RPPWS+GVF DV+ V+DY ++FRH+ LY ++ DL
Sbjct: 57 LYFTDVSEEDMMRISEATSKAEVKQLLKDCMRIDQA-EGLRT--EILADMHYHNYSFCTAQGFTAMKTSTFLSIMKLVLEEAISCRLTAAEACDV-FKDWLLKHSVERPPWSVGVFTYDDVKAVMDYVHNTFFRHYRLYMYVYMTRCDL 201
BLAST of mRNA_P-wetherbeei_contig1668.2.1 vs. uniprot
Match: F0YB80_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB80_AURAN) HSP 1 Score: 103 bits (256), Expect = 1.670e-23 Identity = 55/115 (47.83%), Postives = 76/115 (66.09%), Query Frame = 3
Query: 186 GLGKGGDGLD-ELEEVVLDFHFYNYAFCKERGFNALKTSTFLSIAKEIFDKDMASS--VQSMELSFLRFKELLLTHSVQRPPWSIGVFGAGDVRDVVDYSLTSYFRHFGLYKALF 521
GL K D L E E+V DF+FY +AF +E F+ KTST LSI +++FD DM ++ + M SF R + +LL H+V RPP SIGVF GDVR ++++ L +Y+RH+ LYK F
Sbjct: 46 GLVKVSDSLSSEQSEIVHDFYFYLFAFSRENRFSHEKTSTLLSICRDVFDGDMGTNDPAKHMGTSFERLEGMLLRHAVFRPPKSIGVFDEGDVRSILNFMLHNYYRHWRLYKVCF 160
BLAST of mRNA_P-wetherbeei_contig1668.2.1 vs. uniprot
Match: A0A8C5E2S3_9TELE (Coiled-coil domain-containing protein 189-like n=1 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5E2S3_9TELE) HSP 1 Score: 102 bits (253), Expect = 3.930e-23 Identity = 56/149 (37.58%), Postives = 85/149 (57.05%), Query Frame = 3
Query: 93 LCWKHFSKNQIEELERSLEPLQCKRLLGQFLGLGKGGDGLDELEEVVLDFHFYNYAFCKERGFNALKTSTFLSIAKEIFDKDMASSVQSMELSFLRFKELLLTHSVQRPPWSIGVFGAGDVRDVVDYSLTSYFRHFGLYKALFGASVDL 539
+ W S + +EE+E L +R L + L + D + V+L+ + + FC+E F+ +TSTFLSI K I D ++ + ++E KELLL HSV+RPP+SI +FG +++ V +Y TSYF+HF LYK +F V L
Sbjct: 16 MLWTDISYHDMEEIENMLSTWDLERCLCRLLKV----DLPEPKRGVLLELYVQSVLFCREHNFSREQTSTFLSIIKSIHDLNVETPFDNIEQCVSYCKELLLCHSVRRPPFSINLFGPEEIKCVFEYIYTSYFKHFKLYKYVFTPEVKL 160
BLAST of mRNA_P-wetherbeei_contig1668.2.1 vs. uniprot
Match: A0A2T7PHW0_POMCA (Uncharacterized protein n=5 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PHW0_POMCA) HSP 1 Score: 102 bits (253), Expect = 5.130e-23 Identity = 51/149 (34.23%), Postives = 83/149 (55.70%), Query Frame = 3
Query: 93 LCWKHFSKNQIEELERSLEPLQCKRLLGQFLGLGKGGDGLDELEEVVLDFHFYNYAFCKERGFNALKTSTFLSIAKEIFDKDMASSVQSMELSFLRFKELLLTHSVQRPPWSIGVFGAGDVRDVVDYSLTSYFRHFGLYKALFGASVDL 539
+ W S + ++ L SL K++L L + D + +V+D ++Y F ++ FN KTSTF SI K I + + ++E +F FK+L+L HSV RPP+SI +F A +++ + +Y++ +YFRHF +YK F V L
Sbjct: 31 VVWSDLSVDDVDRLNESLSVDHVKQVLADIFHLDSWQE--DPRQAIVMDLYYYTLQFAQDNNFNREKTSTFFSIIKNIHSACVETPFGNLEHTFRYFKDLILCHSVNRPPFSIELFNAEEIQKISEYTINTYFRHFKMYKYAFTPVVRL 177
BLAST of mRNA_P-wetherbeei_contig1668.2.1 vs. uniprot
Match: A0A329RNJ7_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RNJ7_9STRA) HSP 1 Score: 100 bits (248), Expect = 7.130e-23 Identity = 55/158 (34.81%), Postives = 83/158 (52.53%), Query Frame = 3
Query: 81 MAHNLCWKHFSKNQIEELERSLEPLQCKRLLGQFLGLGKGGDGLDELEEVVLDFHFYNYAF----------CKERGFNALKTSTFLSIAKEIFDKDMA-SSVQSMELSFLRFKELLLTHSVQRPPWSIGVFGAGDVRDVVDYSLTSYFRHFGLYKALF 521
M + WKH S+ ++ +L CK L + L D DE + +LDFH +NY++ C +R F +TS L I + + +D A S +++ SF F+ +LLTHSV R P S+G+F +V +VDY SY+RHF LYK ++
Sbjct: 1 MTEAIVWKHASERELAQLATRHSVDDCKSALAEIFEL----DLADEKQSFLLDFHLHNYSYPFFLHCAMDYCLQRHFQLNQTSVLLGICQTLMKRDFARDSTTNLKSSFDFFQAILLTHSVNRSPKSVGIFSREEVAAIVDYVTNSYYRHFQLYKCIY 154 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1668.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1668.2.1 >prot_P-wetherbeei_contig1668.2.1 ID=prot_P-wetherbeei_contig1668.2.1|Name=mRNA_P-wetherbeei_contig1668.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=158bp MAHNLCWKHFSKNQIEELERSLEPLQCKRLLGQFLGLGKGGDGLDELEEVback to top mRNA from alignment at P-wetherbeei_contig1668:3022..3897- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1668.2.1 ID=mRNA_P-wetherbeei_contig1668.2.1|Name=mRNA_P-wetherbeei_contig1668.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=876bp|location=Sequence derived from alignment at P-wetherbeei_contig1668:3022..3897- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1668:3022..3897- >mRNA_P-wetherbeei_contig1668.2.1 ID=mRNA_P-wetherbeei_contig1668.2.1|Name=mRNA_P-wetherbeei_contig1668.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=474bp|location=Sequence derived from alignment at P-wetherbeei_contig1668:3022..3897- (Phaeothamnion wetherbeei SAG_119_79)back to top |