mRNA_P-wetherbeei_contig1668.1.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: A0A836CJG7_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJG7_9STRA) HSP 1 Score: 172 bits (435), Expect = 9.260e-48 Identity = 115/292 (39.38%), Postives = 160/292 (54.79%), Query Frame = 1
Query: 1 LTYMIDVPDGRNTRQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVGRMAGSILFNGHMRGPALLRDTAYIQQDVLLFPELT---------------------VRESVNYAARLRMPRGTPAAARAARVNGVLKMLHLSGCAQSPVGDALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCG--------------------RTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGK 753
L+Y I R+ +K+LL D+SF PG +V ++GASGAG+S+ L + + R G +AG+I FNG + +LR +AYI+Q+++L T VRE++++AA+LR+P A R ARV + ML L C S VGDAL RGISGGQ +RLSI E++A+P L+ LDE ++GLDSA +L + AS+ L P C T +AT+HQP P +F+ FD+V LL GGR ++FGP A YF L P GK
Sbjct: 96 LSYAIQT---RDRSRKLLLHDISFEARPGEMVAVMGASGAGKSTLLDL-IAGRKQEGFVAGTIAFNGELLTNQILRCSAYIEQNIVLLAAFTYCIRXXXXXXXXXXXXXXXXTVRETLHFAAQLRLPESLSAQQRHARVGQIAAMLGLQECMDSVVGDALTRGISGGQMKRLSIGTEIIAVPPLLFLDEPTSGLDSAVSLGIAASLRRLA-PRLSTTCXXXXXXXXXXXXXXXXXTAQHHTIMATIHQPSPEVFSQFDKVLLLLGGREVYFGPVAHCHKYFSSL----PLGK 378
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: A0A1V9YIE8_9STRA (ATP-binding Cassette (ABC) Superfamily n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YIE8_9STRA) HSP 1 Score: 172 bits (435), Expect = 5.470e-46 Identity = 107/251 (42.63%), Postives = 148/251 (58.96%), Query Frame = 1
Query: 22 PDGRNTRQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVGRMAGSILFNGHMRGPALLRDTAYIQQDVLLFPELTVRESVNYAARLRMPRGTPAAARAARVNGVLKMLHLSGCAQSPVGDALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCGRTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGKDVADFII 774
P + K +L++V LPG+ + ++G SGAG+SS L + L R VG GS+ NGH AL + + Y+ QD + + LTV+E + Y A LRM T A+ R ARV+ VL L LS CA S +G+A RGISGG+R+RLS+A E++ PS++ +DE ++GLDS A SV + L A G T +AT+HQP +FA FD + LL GG ++FGP A A YF G V P + ADF +
Sbjct: 42 PSTKQAESKTILRNVRGSALPGQFITLMGPSGAGKSSLLDI-LSGR--VGGFDGSVTVNGHPWTTALTQCSCYVMQDDVFYHTLTVKEHLLYQADLRMDPQTSASQRVARVDTVLHQLGLSSCADSYIGNASIRGISGGERKRLSLATELLTNPSILFIDEPTSGLDSTMAESVVLELQRL------AARGHTVIATIHQPSSQIFALFDRLLLLTGGETVYFGPAAEAVEYFSARGLVCPGYVNPADFFM 283
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: A0A0D2VWT6_CAPO3 (ABC transporter domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VWT6_CAPO3) HSP 1 Score: 171 bits (434), Expect = 2.690e-45 Identity = 94/260 (36.15%), Postives = 156/260 (60.00%), Query Frame = 1
Query: 1 LTYMIDVPDGRNTRQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVGRMAGSILFNGHMRGPALLRDTAYIQQDVLLFPELTVRESVNYAARLRMPRGTPAAARAARVNGVLKMLHLSGCAQSPVGDALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCGRTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGKDVADFIIAV 780
LTY + + K +L++ + +PG+++ I+G SGAG+++ L V L R + G++ G I NGH R + R +AY++QD L+FP LT +E++ +AA LRMP + R +++ L LS C + +G R+G+SGG+R+R++IA+E++ P L+ LDE ++GLD+ TA V +V A+ + G R + T+HQP ++A FD++ LL G +F+GP A SYF +LG+ P + +DF + +
Sbjct: 130 LTYSVTEVRKKEKIVKEILKEQTGAVMPGQMIAIMGTSGAGKTTLLNV-LAGRNITGQIGGFIALNGHARNKSFRRQSAYVEQDDLMFPNLTTKETITFAALLRMPSKYTTQDKIQRAMDLIRQLGLSQCVNTRIGGPERKGVSGGERKRIAIAVELITNPKLLFLDEPTSGLDAFTAFHVMETVRAVAKGG------RAVVCTIHQPRYNIYALFDKLLLLSQGAPVFYGPALDAVSYFSKLGYECPPLTNCSDFFLDI 382
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: A0A1B6PQF9_SORBI (ABC transporter domain-containing protein n=6 Tax=Andropogoneae TaxID=147429 RepID=A0A1B6PQF9_SORBI) HSP 1 Score: 170 bits (430), Expect = 4.740e-45 Identity = 101/256 (39.45%), Postives = 149/256 (58.20%), Query Frame = 1
Query: 22 PDGRNTRQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVGRMAGSILFNGHMRGPALLRDTAYIQQDVLLFPELTVRESVNYAARLRMPRGTPAAARAARVNGVLKMLHLSGCAQSPVGDALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCGRTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGKDVADFIIAVAAG 789
P ++ +L+ ++ PG ++ +LG SG+G+S+ L + L R L GR G++L G A+ R T ++ QD +L P LTVRE++ + A LR+PR P AA+AA V+ L LS CA + VG+A RG+SGG+R+R+SI E++ PSL+ LDE ++GLDS A + A++ AL R G RT + +VHQP ++ FD V LL G L+FG A YF GF + ADF++ +A G
Sbjct: 85 PASSAAEERTILKGITGEARPGEVLAVLGPSGSGKSTLLSI-LGGRRLAGRHTGTVLAGGRAPCRAVQRRTGFVAQDDVLHPHLTVRETLTFCAMLRLPRSAPGAAKAAAAEAVIAELGLSACADTIVGNAFVRGVSGGERKRVSIGHELLVNPSLLVLDEPTSGLDSTAAARLVATLSALARRG------RTVVLSVHQPSSRVYRMFDSVLLLADGSCLYFGAGRDAMDYFASAGFAPGFHVNPADFMLDLANG 333
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: A0A4P9ZT49_9FUNG (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZT49_9FUNG) HSP 1 Score: 170 bits (430), Expect = 4.950e-45 Identity = 100/250 (40.00%), Postives = 154/250 (61.60%), Query Frame = 1
Query: 31 RNTRQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVGRMAGSILFNGHMRGPALLR-DTAYIQQDVLLFPELTVRESVNYAARLRMP-RGTPAAARAARVNGVLKMLHLSGCAQSPVGDALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCGRTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGKDVADFII 774
R T + LL ++S PG +V I+G+SGAG+S+ L L R G ++G +L+ G R P L + AY++QD LL+PELTV+E++ YAA +++P R A ++A RVN V++ L L+ + +GD++ RG+SGG+R+R +I +E+V P + LDE ++GLDS +AL V V +L R L T+HQP +F FD+V LL G +++ GP A + YF RLG+V + ++ ADF +
Sbjct: 60 RATESRTLLNNISGAVAPGEMVAIMGSSGAGKSTLLNA-LAGRLQTGTLSGQVLYKGVKRDPRLFKKQVAYVEQDDLLYPELTVKETIQYAATMKLPSRDFSAESKARRVNDVIEWLRLTETTDTMIGDSMARGVSGGERKRTAIGVELVTDPGFLFLDEATSGLDSNSALHVCEVVKSLCRARH-----IGVLMTIHQPSAKIFNLFDKVILLCKGDVVYAGPVAESVDYFARLGYVCAQHENPADFFL 303
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: A0A0D6R4J2_ARACU (ABC transporter domain-containing protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R4J2_ARACU) HSP 1 Score: 166 bits (420), Expect = 5.170e-45 Identity = 96/253 (37.94%), Postives = 150/253 (59.29%), Query Frame = 1
Query: 31 RNTRQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVGRMAGSILFNGHMRGPALLRDTAYIQQDVLLFPELTVRESVNYAARLRMPRGTPAAARAARVNGVLKMLHLSGCAQSPVGDALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCGRTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGKDVADFIIAVAAG 789
R +K +L V+ PG ++ +LG SG+G+++ L + L G+++GSILFNG G ++ R T ++ QD +L+ LTVRE++ YAA LR+PR + V+ ++ L L+ C + +G L RG+SGG+R+R+SI E++ PSL+ LDE ++GLDS TA + ++ L R G RT + T+HQP LF F +V LL G L+++G +AA YF +GF + ADF++ +A G
Sbjct: 129 RQAVEKTILNGVTGMVCPGEILAMLGPSGSGKTTLLSA--LGGRLEGKVSGSILFNGKRFGKSMKRKTGFVTQDDVLYSHLTVRETLVYAALLRLPRALSRQEKREHVDAIIGELGLTRCRNTIIGGPLLRGVSGGERKRVSIGQEMLTNPSLLLLDEPTSGLDSTTAQRIIVTLRNLARGG------RTIITTIHQPSSRLFYMFHKVILLSEGNLIYYGEASAAMDYFPSIGFAPSYPMNPADFMLDLANG 373
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: A0A0L0DSB8_THETB (ABC transporter domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DSB8_THETB) HSP 1 Score: 172 bits (435), Expect = 6.270e-45 Identity = 102/245 (41.63%), Postives = 144/245 (58.78%), Query Frame = 1
Query: 40 RQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVGRMAGSILFNGHMRGPALLRDTAYIQQDVLLFPELTVRESVNYAARLRMPRGTPAAARAARVNGVLKMLHLSGCAQSPVGDALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCGRTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGKDVADFII 774
+ K +L+ S C PG + I+G SGAG+S+ L V L R M+G +L NG R A R Y+ QD L P LTVRE++N+ A+LR+ AA R ARV V+ L L+ A S +GD L RGISGG+RRR+SIA E+V P ++ LDE ++GLDS TA ++ A++ L T + ++HQP +++ASFD + LL G L+ G A A +F +LG P+ + ADF+I
Sbjct: 1094 KDKTILRSASGYCAPGTVTAIMGPSGAGKSTLLNV-LAGRISFSDMSGQVLVNGQPRSTAFKRIAGYVTQDDFLIPTLTVRETLNFHAQLRLGNSVSAATRVARVEKVIAQLELTHVADSRIGDRLIRGISGGERRRVSIATELVTSPRILFLDEPTSGLDSCTASAIMATLRELAT-----SSALTVILSIHQPRSSIYASFDNLILLSKGSTLYNGRAAGATGHFAQLGHPCPQDFNPADFLI 1332
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: W7TH06_9STRA (Atp-binding cassette superfamily n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TH06_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.030e-44 Identity = 108/251 (43.03%), Postives = 150/251 (59.76%), Query Frame = 1
Query: 43 QKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVGRMAGSILFNGHMRGPALLRDTAYIQQDVLLFPELTVRESVNYAARLRMPRGTPAAARAARVNGVLKMLHLSGCAQSPVGDALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCGRTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGKDVADFIIAVAAGAE 795
+K LL+ ++ LPG + ++G SGAG+S+ L L R G M+G I FNG R ++AY++QD + P LTV E++ +AA+LR+ R +R+ V +L L+ C S VGDA RGISGGQ +RLSIA+E++ +PSLI LDE ++GLDS A V + L A RT LAT+HQP +A +V L+ GR++F GP A+SYF+ LGF + ADFIIAV +GAE
Sbjct: 27 RKELLKHITMTVLPGEIAFVMGPSGAGKSTLLDA-LAGRIKDGVMSGHIYFNGRPRSSDFYSNSAYVRQDDVHIPNLTVGETLFFAAQLRLGGEYTINERQSRIKAVSDLLGLNSCILSLVGDAGMRGISGGQLKRLSIAVEIMNMPSLIFLDEPTSGLDSVMAHDVMTFTNRL------ADQNRTILATIHQPSSETYALASKVILVSAGRIMFCGPANEAQSYFISLGFSAQMFGNPADFIIAVVSGAE 270
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: A0A1Y2C724_9FUNG (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C724_9FUNG) HSP 1 Score: 168 bits (426), Expect = 1.120e-44 Identity = 104/269 (38.66%), Postives = 157/269 (58.36%), Query Frame = 1
Query: 1 LTYMIDVPDGRNTRQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVGRMA--------GSILFNGHMRGPALLRDT-AYIQQDVLLFPELTVRESVNYAARLRMPRGTPAAARAARVNGVLKMLHLSGCAQSPVGDALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCGRTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGKDVADFIIAV 780
+TY+ VP G+ K LL + S G++V I+G SGAG+S+ L L GR+A G IL NG R P +T +Y++QD L+F L+V E++ YAA+LR+P PA + +VN ++ L+L+GC ++ +GD+L RGISGG+R+R+SI +E+V P ++ LDE ++GLDSA +L + ++ L G L T+HQP + FD++ LL G+ L+FGP AA +F LGF P + +DF + V
Sbjct: 24 VTYI--VPYGKKGETKTLLDNASGYVRQGQVVAIMGGSGAGKSTLLNT------LAGRIADQKGSELRGEILLNGEPRNPGSWTNTCSYVEQDDLMFTNLSVEETLTYAAKLRLPSSMPAKEKEEKVNEIIMQLNLNGCRKTWIGDSLSRGISGGERKRVSIGVELVTNPKILFLDEPTSGLDSANSLGILETIKKLA-----VSRGMIVLMTIHQPRTEILELFDKILLLSLGKTLWFGPTNAALEHFNDLGFPLPPKTNPSDFFMDV 279
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Match: A0A2V0NRS2_9CHLO (ABC transporter Adp1 n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NRS2_9CHLO) HSP 1 Score: 170 bits (431), Expect = 2.090e-44 Identity = 108/260 (41.54%), Postives = 150/260 (57.69%), Query Frame = 1
Query: 25 DGRNTRQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRFLVG---RMAGSILFNGHMRGPALLRDTAYIQQDVLLFPELTVRESVNYAARLRMPRGTPAAARAARVNGVLKMLHLSGCAQSPVG-DALRRGISGGQRRRLSIAMEVVALPSLICLDEISTGLDSATALSVFASVHALVRPGPGAGCGRTALATVHQPGPALFASFDEVALLHGGRLLFFGPPAAAESYFLRLGFVRPRGKDVADFIIAVAAGA 792
D RQKVLL VS G +VG++G SGAG+S+ L + + VG R+ G++ G R AL + TA++ Q +L P LTV E V Y+A LR+PR A R+NGVL L LS A S VG A RG+SGG+RRR++IAM +V P L+ +DE ++GLDS TA ++ + H + AG GR + ++HQP P +F S +V LL GRL + GPP+ YF G P G+ A+ ++ VA+ A
Sbjct: 713 DAEGRRQKVLLHGVSGSIAEGEVVGVMGPSGAGKSTLLSILSGATESVGAGARVEGAVTLGGEARRSALRKITAFVPQRDVLLPALTVEECVRYSALLRLPRSLAAEEVQERINGVLSELGLSHVAASLVGGSASIRGVSGGERRRVTIAMALVTRPRLVIMDEPTSGLDSYTACNLMRTAHDI------AGHGRVVVMSLHQPSPDMFDSLTQVLLLAKGRLAYLGPPSGVAPYFAAAGHPAPAGRQPAEHMLHVASQA 966 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1668.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1668.1.4 >prot_P-wetherbeei_contig1668.1.4 ID=prot_P-wetherbeei_contig1668.1.4|Name=mRNA_P-wetherbeei_contig1668.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=265bp MIDVPDGRNTRQKVLLQDVSFRCLPGRLVGILGASGAGESSRLRVPLISRback to top mRNA from alignment at P-wetherbeei_contig1668:273..1435- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1668.1.4 ID=mRNA_P-wetherbeei_contig1668.1.4|Name=mRNA_P-wetherbeei_contig1668.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1163bp|location=Sequence derived from alignment at P-wetherbeei_contig1668:273..1435- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1668:273..1435- >mRNA_P-wetherbeei_contig1668.1.4 ID=mRNA_P-wetherbeei_contig1668.1.4|Name=mRNA_P-wetherbeei_contig1668.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=795bp|location=Sequence derived from alignment at P-wetherbeei_contig1668:273..1435- (Phaeothamnion wetherbeei SAG_119_79)back to top |