mRNA_P-wetherbeei_contig16667.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16667.2.1
Unique NamemRNA_P-wetherbeei_contig16667.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16667.2.1 vs. uniprot
Match: A0A7C4XUF1_9HYPH (Alpha/beta fold hydrolase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XUF1_9HYPH)

HSP 1 Score: 284 bits (726), Expect = 1.180e-93
Identity = 130/226 (57.52%), Postives = 169/226 (74.78%), Query Frame = 1
Query:    1 MRARVKDIDMNYVVSGKHTAPPVLLHHPLATELSVWDELTAALEPHYRVIRMDARGHGKTDASPGPYDMNGLAGDVVALLDHLGIQKTRYLGLSMGGFVGNVLGYTHPERFHSLVLVSTSSDMSP-AREVWEGRVKTVVKDGMSNVIVDGSMQRWLSPASLASKPQLVTRLSKMVAETPPAGFIGWCQAIMNFNVTSRLKEIDLPVRIIAGSIDPATTPAMMQVMH 675
            MRAR+  ID++YVVSG+  APPVLLHHPLAT LS+WDELT ALEP YRVIR DARGHG ++A  G Y    L  DV+ LLDHLG+   RYLGLSMGGFVG  LG  HP+R HSL LVSTSS+M+   RE+W+ R++ V + GM+  +VDG++ RWL+P ++ S+P+LV RL  M+  TPPAG++GWC AI   ++T+R++ I LP ++IAG +DPAT P   +V+H
Sbjct:    1 MRARINGIDLHYVVSGRVDAPPVLLHHPLATNLSIWDELTVALEPRYRVIRFDARGHGASEAPKGAYTFETLTADVIGLLDHLGVASVRYLGLSMGGFVGQYLGLLHPDRVHSLCLVSTSSNMAALGREIWDERIRIVDQQGMTRSVVDGALARWLAPDAMKSRPELVARLRAMIEATPPAGYVGWCHAIRALDITARIRAIRLPTKVIAGELDPATPPTDARVIH 226          
BLAST of mRNA_P-wetherbeei_contig16667.2.1 vs. uniprot
Match: A0A2W4RVG8_9PROT (3-oxoadipate enol-lactonase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RVG8_9PROT)

HSP 1 Score: 265 bits (678), Expect = 2.210e-86
Identity = 125/227 (55.07%), Postives = 164/227 (72.25%), Query Frame = 1
Query:    1 MRARVKDIDMNYVVSGKHTAPPVLLHHPLATELSVWDELTAALEPHYRVIRMDARGHGKTDASPGPYDMNGLAGDVVALLDHLGIQKTRYLGLSMGGFVGNVLGYTHPERFHSLVLVSTSSDM-SPAREVWEGRVKTVVKDGMSNVIVDGSMQRWLSPASLASKPQLVTRLSKMVAETPPAGFIGWCQAIMNFNVTSRLKEIDLPVRIIAGSIDPATTPAMMQVMHR 678
            MRA +  I MNY VSG+  AP V+LHHPLAT LS WD LTAALEP YRV+R DARGHGKT+A  GPY    LA DV+ L+DHLGI K R+LGLSMGG VG  LG+ +PERFH L LV+T+S + + A  +W+ R++ V   G  + +V+G++ RW+ P +  +KP++V +L+ M+  TPP G++GWCQAI N N+TSRLKEI +P  +I G  DP+T PA  +V+HR
Sbjct:    1 MRATINGIQMNYEVSGRSDAPAVVLHHPLATNLSTWDALTAALEPKYRVVRFDARGHGKTEAPEGPYAFETLAADVIGLMDHLGIDKARFLGLSMGGMVGQYLGFLYPERFHCLCLVATTSAVPAQAHPLWDERIR-VASTGSLSELVEGAIARWVVPETKTNKPEVVAQLTAMMESTPPKGYVGWCQAIRNLNITSRLKEIRVPTCVIVGERDPSTPPAAAEVIHR 226          
BLAST of mRNA_P-wetherbeei_contig16667.2.1 vs. uniprot
Match: A0A2W4KVU7_9PROT (3-oxoadipate enol-lactonase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4KVU7_9PROT)

HSP 1 Score: 251 bits (642), Expect = 6.400e-81
Identity = 121/227 (53.30%), Postives = 163/227 (71.81%), Query Frame = 1
Query:    1 MRARVKDIDMNYVVSGKHTAPPVLLHHPLATELSVWDELTAALEPHYRVIRMDARGHGKTDASPGPYDMNGLAGDVVALLDHLGIQKTRYLGLSMGGFVGNVLGYTHPERFHSLVLVSTSSDM-SPAREVWEGRVKTVVKDGMSNVIVDGSMQRWLSPASLASKPQLVTRLSKMVAETPPAGFIGWCQAIMNFNVTSRLKEIDLPVRIIAGSIDPATTPAMMQVMHR 678
            MRAR+  I++N+ VSG      VLLHHPLA++L+VWD LT ALEP YRVIRMDARGHGKT+A  GPY+   LA DVV LLD L I K  ++GLSMGG VG  LG  +P RF SL LV+T+S + + A+ +WE R++      +S+ +V+ ++ RW++P +L +KP++V RL  ++  TPP G+ GWC AI N NVT+RLKEI LP R+I G++DP+T PA  +V+HR
Sbjct:    1 MRARINGIEINFEVSGTADTSAVLLHHPLASDLTVWDSLTEALEPSYRVIRMDARGHGKTEAPDGPYNFEMLAADVVGLLDELKIDKAHFVGLSMGGMVGQYLGLLYPHRFKSLCLVATTSAVPAEAQALWEQRIRAAEAGDLSS-LVEAAVGRWVAPRTLQNKPEVVERLKALMLATPPKGYAGWCHAIRNLNVTNRLKEISLPTRVIVGALDPSTPPAAAEVIHR 226          
BLAST of mRNA_P-wetherbeei_contig16667.2.1 vs. uniprot
Match: A0A1E4CUE9_9HYPH (Hydrolase_4 domain-containing protein n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A1E4CUE9_9HYPH)

HSP 1 Score: 246 bits (627), Expect = 1.170e-78
Identity = 123/226 (54.42%), Postives = 156/226 (69.03%), Query Frame = 1
Query:    1 MRARVKDIDMNYVVSGKHTAPPVLLHHPLATELSVWDELTAALEPHYRVIRMDARGHGKTDASPGPYDMNGLAGDVVALLDHLGIQKTRYLGLSMGGFVGNVLGYTHPERFHSLVLVSTSSDM-SPAREVWEGRVKTVVKDGMSNVIVDGSMQRWLSPASLASKPQLVTRLSKMVAETPPAGFIGWCQAIMNFNVTSRLKEIDLPVRIIAGSIDPATTPAMMQVMH 675
            M++ V  ID+NY +SG    P V+LHHPLAT L+ WDELTAALEP+YRV+R+DARGHGK+DA  GPY    LA DVV L+   G+QK  +LGLSMGG VG  LG  +PERF+ L+LVSTSS +   A+ +W+ R+  V   GM    V+G++QRW+SP ++   P LV RLS+M+  TP  G++GWCQAI   NVT RL  I LP R+I G IDPAT  A  Q +H
Sbjct:    1 MKSTVNGIDINYELSGAADGPVVVLHHPLATNLTCWDELTAALEPNYRVLRLDARGHGKSDAPAGPYAFETLAKDVVELMTACGVQKASFLGLSMGGMVGQYLGLLYPERFNCLLLVSTSSRIPDEAQPLWDQRIHAVTTGGMVTQ-VEGAIQRWVSPRAIKENPALVERLSQMIKLTPIDGYVGWCQAIRGLNVTDRLGAIRLPTRVIVGEIDPATPVAASQAIH 225          
BLAST of mRNA_P-wetherbeei_contig16667.2.1 vs. uniprot
Match: A0A7C2QRD8_9HYPH (Alpha/beta fold hydrolase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2QRD8_9HYPH)

HSP 1 Score: 239 bits (610), Expect = 4.120e-76
Identity = 119/227 (52.42%), Postives = 155/227 (68.28%), Query Frame = 1
Query:    1 MRARVKDIDMNYVVSGKHTAPPVLLHHPLATELSVWDELTAALEPHYRVIRMDARGHGKTDASPGPYDMNGLAGDVVALLDHLGIQKTRYLGLSMGGFVGNVLGYTHPERFHSLVLVSTSSDMSP-AREVWEGRVKTVVKDGMSNVIVDGSMQRWLSPASLASKPQLVTRLSKMVAETPPAGFIGWCQAIMNFNVTSRLKEIDLPVRIIAGSIDPATTPAMMQVMHR 678
            M+A +  I MN+  +G   AP V+LHHPLATELS+WDE+TA L P YRV+R+DARGHGKT+A+ GPY    L  D V L+DHL I +  +LGLSMGG VG  LG  HP+R  SL+LVSTSS + P    +W+ R+K   + GM +  V+G+MQRW+S A   +   LV RLS+M+  TP  G++GW  AI N NVT RLK I LP R+I G++DPAT PA  + +H+
Sbjct:    1 MQATINGIRMNWQTAGPDGAPVVVLHHPLATELSIWDEITAVLTPRYRVVRLDARGHGKTEATKGPYTFETLTADTVGLMDHLKIARAHFLGLSMGGMVGQYLGLLHPQRVASLLLVSTSSRVPPEGAALWDERIKAAQEKGMRSQ-VEGAMQRWVSEAGRRNAA-LVARLSRMIEATPVDGYVGWGGAIRNLNVTDRLKAIRLPTRVIVGALDPATPPAAAEAIHK 225          
BLAST of mRNA_P-wetherbeei_contig16667.2.1 vs. uniprot
Match: A0A6N6SWS1_9HYPH (Alpha/beta fold hydrolase n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6SWS1_9HYPH)

HSP 1 Score: 237 bits (605), Expect = 2.430e-75
Identity = 120/227 (52.86%), Postives = 156/227 (68.72%), Query Frame = 1
Query:    1 MRARVKDIDMNYVVSGKHTAPPVLLHHPLATELSVWDELTAALEPHYRVIRMDARGHGKTDASPGPYDMNGLAGDVVALLDHLGIQKTRYLGLSMGGFVGNVLGYTHPERFHSLVLVSTSSDMSP-AREVWEGRVKTVVKDGMSNVIVDGSMQRWLSPASLASKPQLVTRLSKMVAETPPAGFIGWCQAIMNFNVTSRLKEIDLPVRIIAGSIDPATTPAMMQVMHR 678
            M+A +  + MNY VSG  +A PV+LHHPLAT +S W+ELT AL P YRV+R DARGHG+T+A  GPY    L  DVVAL+DHL I +  +LGLSMGG VG  LG  H +RF SL LVS++S + P AR++WE RV+   + GMS+ +   +MQRW++ A+   KP L  RL++M+  TP  G+ GWC AI + N+T RLK I LP RII G+ DPAT  A  +V+HR
Sbjct:    1 MQASINGMRMNYEVSGPESAFPVVLHHPLATNVSFWNELTGALSPDYRVVRFDARGHGQTEAPKGPYSFETLTADVVALMDHLKIARAHFLGLSMGGMVGQYLGLLHADRFASLQLVSSTSRIPPEARQLWEDRVQVAREKGMSSQVTP-AMQRWVTDAN-RQKPALFARLARMIETTPLEGYAGWCLAIRDLNITERLKAITLPTRIIVGAEDPATPVAASEVIHR 225          
BLAST of mRNA_P-wetherbeei_contig16667.2.1 vs. uniprot
Match: A0A7V5QAZ7_9HYPH (3-oxoadipate enol-lactonase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7V5QAZ7_9HYPH)

HSP 1 Score: 204 bits (520), Expect = 1.760e-62
Identity = 102/213 (47.89%), Postives = 136/213 (63.85%), Query Frame = 1
Query:   40 VSGKHTAPPVLLHHPLATELSVWDELTAALEPHYRVIRMDARGHGKTDASPGPYDMNGLAGDVVALLDHLGIQKTRYLGLSMGGFVGNVLGYTHPERFHSLVLVSTSSDMSP-AREVWEGRVKTVVKDGMSNVIVDGSMQRWLSPASLASKPQLVTRLSKMVAETPPAGFIGWCQAIMNFNVTSRLKEIDLPVRIIAGSIDPATTPAMMQVMH 675
            V G H AP +LLHH LAT L  WD +  AL  HYRV+R DARGHGK+DA  GPYD+  L  DV+ +LDHL I +  +LGLSMGG VG +LG +H +R  SL+L ST+S +SP A  +W+ R+  V   GM +  V+G++ RW +   L S  Q V  +++M+AETP  G+ GWC+AI   N+T +L  I  P  +I G  DP T  A  +V+H
Sbjct:   18 VEGAHDAPVLLLHHSLATNLHSWDRIVPALAEHYRVVRFDARGHGKSDAPAGPYDLAHLTEDVLRILDHLEINRAHFLGLSMGGMVGQLLGLSHGDRVLSLILASTTSFVSPEAGPLWDERIARVRSAGMVSQ-VEGTVGRWFTQGFLESDTQRVEEIARMIAETPVEGYAGWCEAIKTLNLTDKLGAITAPTLVIVGEEDPGTPVAAARVIH 229          
BLAST of mRNA_P-wetherbeei_contig16667.2.1 vs. uniprot
Match: A0A3M1KVP0_9DELT (3-oxoadipate enol-lactonase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1KVP0_9DELT)

HSP 1 Score: 192 bits (487), Expect = 2.140e-57
Identity = 98/224 (43.75%), Postives = 135/224 (60.27%), Query Frame = 1
Query:   19 DIDMNYVVSGKHTAPPVLLHHPLATELSVWDELTAALEPHYRVIRMDARGHGKTDASPGPYDMNGLAGDVVALLDHLGIQKTRYLGLSMGGFVGNVLGYTHPERFHSLVLVSTSS-----DMSPAREVWEGRVKTVVKDGMSNVIVDGSMQRWLSPASLASKPQLVTRLSKMVAETPPAGFIGWCQAIMNFNVTSRLKEIDLPVRIIAGSIDPATTPAMMQVMH 675
            DI+++YV+ G   AP V L H L  +L VWD    AL   YRV+R D RGHG TDA  GPY +  LAGDVVALL+ LGI KT ++GLSMGG +G VL   HP R   LVL  T+S     D +     W+ R+  V+ DG+    VD +++RWLSP   A+ P++V ++ + + +TP AG++G CQAI   ++T RL +I  P  +I G  D  T  +  + +H
Sbjct:    9 DINVHYVIEGPDDAPVVTLSHALGADLGVWDAQAKALSERYRVLRYDTRGHGDTDAPKGPYTLEQLAGDVVALLEALGIAKTYFVGLSMGGMIGQVLALEHPGRVRGLVLCDTTSGRGELDQATWDANWKMRIDAVLSDGLGPQ-VDPTIERWLSPDWAAAHPEVVEKIRRTLEQTPVAGYVGCCQAISKLDLTDRLPDISCPTLVIVGEEDQGTPVSAARTIH 231          
BLAST of mRNA_P-wetherbeei_contig16667.2.1 vs. uniprot
Match: A0A2N6AU75_9HYPH (3-oxoadipate enol-lactonase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A2N6AU75_9HYPH)

HSP 1 Score: 190 bits (483), Expect = 7.620e-57
Identity = 91/211 (43.13%), Postives = 131/211 (62.09%), Query Frame = 1
Query:   46 GKHTAPPVLLHHPLATELSVWDELTAALEPHYRVIRMDARGHGKTDASPGPYDMNGLAGDVVALLDHLGIQKTRYLGLSMGGFVGNVLGYTHPERFHSLVLVSTSSDMSP-AREVWEGRVKTVVKDGMSNVIVDGSMQRWLSPASLASKPQLVTRLSKMVAETPPAGFIGWCQAIMNFNVTSRLKEIDLPVRIIAGSIDPATTPAMMQVMH 675
            G H AP +LLHH LA+    WD +   L  HY V+R DARGHG++D   GPYD+  LA DV+ L+D L I +  Y+GLSMGG +G +LG  H +R  SL L ST+S+M P A  +W+ R+      GM  V+VD +++RW +   +A+    +  +++M++ETPP GF GW +AI   ++T RL EI +P  ++ G  DP TT A  + +H
Sbjct:   20 GLHDAPVILLHHSLASTSRGWDSIVPKLAEHYHVVRFDARGHGRSDVPEGPYDLAHLAEDVIRLIDGLEINRVHYVGLSMGGMIGQILGIDHGDRLRSLTLASTTSEMPPEAGPMWDERIAHARNSGME-VLVDDTVKRWFTADFVAAHDPAILPIAEMISETPPEGFAGWGEAIKQLDLTGRLGEIKVPTLVLVGRDDPGTTVAAAERIH 229          
BLAST of mRNA_P-wetherbeei_contig16667.2.1 vs. uniprot
Match: A0A653A423_9DELT (Alpha/beta hydrolase fold n=2 Tax=Desulfatiglans TaxID=1549126 RepID=A0A653A423_9DELT)

HSP 1 Score: 188 bits (477), Expect = 6.680e-56
Identity = 92/226 (40.71%), Postives = 132/226 (58.41%), Query Frame = 1
Query:    1 MRARVKDIDMNYVVSGKHTAPPVLLHHPLATELSVWDELTAALEPHYRVIRMDARGHGKTDASPGPYDMNGLAGDVVALLDHLGIQKTRYLGLSMGGFVGNVLGYTHPERFHSLVLVSTSSDMSP-AREVWEGRVKTVVKDGMSNVIVDGSMQRWLSPASLASKPQLVTRLSKMVAETPPAGFIGWCQAIMNFNVTSRLKEIDLPVRIIAGSIDPATTPAMMQVMH 675
            M+ R  DI + Y + G   AP V + H L T L +W+    AL+  YRV+R D RGHG TDA PGPY +  LA D+  LL  LG+  T ++G+SMGG +G  L   HPE   SL+L  T+S + P A  VWE R++  +++GM+   V+ +++RW +P      P+LV  + +M+ +TPP G+ G C AI   ++T  L  I LPV I+ G  DP T     +V+H
Sbjct:    1 MKIRANDITIRYSLEGPPEAPLVTMSHSLGTSLELWEPQVQALKSRYRVLRFDTRGHGGTDAPPGPYSLEMLASDIFELLGALGLGPTHFMGISMGGMIGQTLALLHPEALKSLILCDTTSRVPPEAAPVWEERIEATLREGMAQH-VEPTLERWFTPRFREEHPELVEPVRRMILDTPPEGYAGCCHAIRRLDLTEALGRIALPVLIVVGEDDPGTPVFESKVLH 225          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16667.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4XUF1_9HYPH1.180e-9357.52Alpha/beta fold hydrolase n=1 Tax=Hyphomicrobiales... [more]
A0A2W4RVG8_9PROT2.210e-8655.073-oxoadipate enol-lactonase n=1 Tax=Proteobacteria... [more]
A0A2W4KVU7_9PROT6.400e-8153.303-oxoadipate enol-lactonase n=1 Tax=Proteobacteria... [more]
A0A1E4CUE9_9HYPH1.170e-7854.42Hydrolase_4 domain-containing protein n=2 Tax=uncl... [more]
A0A7C2QRD8_9HYPH4.120e-7652.42Alpha/beta fold hydrolase n=1 Tax=Hyphomicrobiales... [more]
A0A6N6SWS1_9HYPH2.430e-7552.86Alpha/beta fold hydrolase n=1 Tax=Hyphomicrobiacea... [more]
A0A7V5QAZ7_9HYPH1.760e-6247.893-oxoadipate enol-lactonase n=1 Tax=Hyphomicrobial... [more]
A0A3M1KVP0_9DELT2.140e-5743.753-oxoadipate enol-lactonase n=1 Tax=Deltaproteobac... [more]
A0A2N6AU75_9HYPH7.620e-5743.133-oxoadipate enol-lactonase n=1 Tax=Hyphomicrobial... [more]
A0A653A423_9DELT6.680e-5640.71Alpha/beta hydrolase fold n=2 Tax=Desulfatiglans T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16667contigP-wetherbeei_contig16667:818..1495 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog631454.N177_4196
Preferred nameMA20_09375
PFAMsAbhydrolase_1
Model size678
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00825
KEGG koko:K01055
KEGG ReactionR02991
KEGG Pathwayko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220
KEGG ModuleM00568
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.08e-54
EggNOG OGsCOG0596@1|root,COG0596@2|Bacteria,1QTTN@1224|Proteobacteria,2TRYE@28211|Alphaproteobacteria,1JNU8@119043|Rhodobiaceae
EC3.1.1.24
DescriptionSerine aminopeptidase, S33
Cds size678
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186093.6101797-CDS-P-wetherbeei_contig16667:817..14951683186093.6101797-CDS-P-wetherbeei_contig16667:817..1495Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16667 818..1495 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16667.2.1prot_P-wetherbeei_contig16667.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16667 818..1495 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16667.2.1

>prot_P-wetherbeei_contig16667.2.1 ID=prot_P-wetherbeei_contig16667.2.1|Name=mRNA_P-wetherbeei_contig16667.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=226bp
MRARVKDIDMNYVVSGKHTAPPVLLHHPLATELSVWDELTAALEPHYRVI
RMDARGHGKTDASPGPYDMNGLAGDVVALLDHLGIQKTRYLGLSMGGFVG
NVLGYTHPERFHSLVLVSTSSDMSPAREVWEGRVKTVVKDGMSNVIVDGS
MQRWLSPASLASKPQLVTRLSKMVAETPPAGFIGWCQAIMNFNVTSRLKE
IDLPVRIIAGSIDPATTPAMMQVMHR
back to top

mRNA from alignment at P-wetherbeei_contig16667:818..1495+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16667.2.1 ID=mRNA_P-wetherbeei_contig16667.2.1|Name=mRNA_P-wetherbeei_contig16667.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=678bp|location=Sequence derived from alignment at P-wetherbeei_contig16667:818..1495+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGTGCGCGCGTCAAAGACATCGATATGAACTACGTCGTTTCGGGCAA GCACACGGCGCCGCCAGTGCTGCTGCATCATCCGCTGGCGACGGAGCTGT CGGTCTGGGACGAGCTGACGGCGGCGCTCGAGCCGCACTACCGGGTGATC CGGATGGATGCGCGCGGGCACGGCAAGACCGATGCTTCGCCCGGACCCTA CGACATGAACGGGCTCGCGGGAGACGTCGTGGCATTGCTCGATCATCTCG GCATCCAGAAGACGCGGTATCTCGGGCTGTCGATGGGCGGGTTCGTCGGC AATGTGCTGGGCTATACGCACCCAGAAAGGTTTCATTCGCTTGTCCTCGT TTCGACATCGAGCGACATGTCGCCAGCGCGCGAGGTGTGGGAGGGTCGTG TCAAAACGGTCGTCAAGGACGGCATGTCGAACGTGATCGTCGATGGTTCG ATGCAGCGCTGGCTTTCGCCGGCTTCGCTGGCGAGCAAGCCGCAACTCGT GACCAGGCTCAGCAAGATGGTTGCGGAGACGCCGCCGGCTGGGTTCATAG GCTGGTGCCAGGCGATCATGAACTTCAATGTCACGAGCCGGTTGAAGGAG ATCGATCTCCCGGTACGTATCATCGCCGGGTCGATCGATCCGGCGACGAC ACCTGCGATGATGCAGGTCATGCATCGG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig16667:818..1495+

>mRNA_P-wetherbeei_contig16667.2.1 ID=mRNA_P-wetherbeei_contig16667.2.1|Name=mRNA_P-wetherbeei_contig16667.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=678bp|location=Sequence derived from alignment at P-wetherbeei_contig16667:818..1495+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGTGCGCGCGTCAAAGACATCGATATGAACTACGTCGTTTCGGGCAA
GCACACGGCGCCGCCAGTGCTGCTGCATCATCCGCTGGCGACGGAGCTGT
CGGTCTGGGACGAGCTGACGGCGGCGCTCGAGCCGCACTACCGGGTGATC
CGGATGGATGCGCGCGGGCACGGCAAGACCGATGCTTCGCCCGGACCCTA
CGACATGAACGGGCTCGCGGGAGACGTCGTGGCATTGCTCGATCATCTCG
GCATCCAGAAGACGCGGTATCTCGGGCTGTCGATGGGCGGGTTCGTCGGC
AATGTGCTGGGCTATACGCACCCAGAAAGGTTTCATTCGCTTGTCCTCGT
TTCGACATCGAGCGACATGTCGCCAGCGCGCGAGGTGTGGGAGGGTCGTG
TCAAAACGGTCGTCAAGGACGGCATGTCGAACGTGATCGTCGATGGTTCG
ATGCAGCGCTGGCTTTCGCCGGCTTCGCTGGCGAGCAAGCCGCAACTCGT
GACCAGGCTCAGCAAGATGGTTGCGGAGACGCCGCCGGCTGGGTTCATAG
GCTGGTGCCAGGCGATCATGAACTTCAATGTCACGAGCCGGTTGAAGGAG
ATCGATCTCCCGGTACGTATCATCGCCGGGTCGATCGATCCGGCGACGAC
ACCTGCGATGATGCAGGTCATGCATCGG
back to top