mRNA_P-wetherbeei_contig16667.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16667.1.1 vs. uniprot
Match: A0A7C4XQ03_9HYPH (UPF0114 protein ENR94_14675 n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XQ03_9HYPH) HSP 1 Score: 246 bits (627), Expect = 7.940e-80 Identity = 136/182 (74.73%), Postives = 154/182 (84.62%), Query Frame = 1
Query: 1 MAVRFGQVAETVLERCLFASRWFLAPFYLGLALALLVLMIKFIEEFWHLAIHAFSWTEAQVILGVLTLVDLALTGSLLVIVIFSGYENFVSKIDHSQHEDWPSWMGTIDFTALKLKLLSSIVAISAIQLLKQFMEVKELVGKDSAVADKQLYWYVVIHLVFVGSSVLLALSDRIAGSHDNGA 546
M R Q E LE LFASRW LAPFY+GLAL++LVL+IKF+EEF+H+A AF TEA V+LGVL+LVDLALTGSLLVIVIFSGYENFVS+IDHS+H+DWP+WMGTIDFTALKLKLLSSIVAISAIQLLKQFM+VK +D+ L+WYVVIHLVFVGSSVLLALSDRIAG D+GA
Sbjct: 1 MQDRLMQGFERSLEAMLFASRWLLAPFYVGLALSILVLLIKFVEEFFHIASRAFDSTEAGVVLGVLSLVDLALTGSLLVIVIFSGYENFVSRIDHSKHKDWPAWMGTIDFTALKLKLLSSIVAISAIQLLKQFMDVKTS-------SDRDLFWYVVIHLVFVGSSVLLALSDRIAGD-DHGA 174
BLAST of mRNA_P-wetherbeei_contig16667.1.1 vs. uniprot
Match: A0A2S5MVP1_HYPSQ (UPF0114 protein CTY28_09930 n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A2S5MVP1_HYPSQ) HSP 1 Score: 232 bits (591), Expect = 1.470e-74 Identity = 121/170 (71.18%), Postives = 144/170 (84.71%), Query Frame = 1
Query: 28 ETVLERCLFASRWFLAPFYLGLALALLVLMIKFIEEFWHLAIHAFSWTEAQVILGVLTLVDLALTGSLLVIVIFSGYENFVSKIDHSQHEDWPSWMGTIDFTALKLKLLSSIVAISAIQLLKQFMEVKELVGKDSAVADKQLYWYVVIHLVFVGSSVLLALSDRIAGSHD 537
E +LE +FASRW LAPFYLGLAL+++V++IKF+ EF+HLA+HAF+ TE+ VILG+L LVDL L GSLL+IVIFSGYENFVSKIDH H+DWP WMGTIDF+ALKLKLLSSIVAISA+ LLK FM +K + + A+KQ++W VVIHLVFV SSVLLALSDRIAG HD
Sbjct: 17 ERMLENAIFASRWLLAPFYLGLALSIVVVLIKFMAEFFHLAMHAFTATESDVILGILALVDLTLMGSLLIIVIFSGYENFVSKIDHVGHKDWPEWMGTIDFSALKLKLLSSIVAISAVHLLKSFMALKVVTPE----AEKQIFWLVVIHLVFVVSSVLLALSDRIAGKHD 182
BLAST of mRNA_P-wetherbeei_contig16667.1.1 vs. uniprot
Match: A0A7Y4XHH0_HYPSQ (UPF0114 protein HOP09_08945 n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y4XHH0_HYPSQ) HSP 1 Score: 231 bits (588), Expect = 5.140e-74 Identity = 122/177 (68.93%), Postives = 147/177 (83.05%), Query Frame = 1
Query: 28 ETVLERCLFASRWFLAPFYLGLALALLVLMIKFIEEFWHLAIHAFSWTEAQVILGVLTLVDLALTGSLLVIVIFSGYENFVSKIDHSQHEDWPSWMGTIDFTALKLKLLSSIVAISAIQLLKQFMEVKELVGKDSAVADKQLYWYVVIHLVFVGSSVLLALSDRIAG---SHDNGAP 549
E LE+ LFASRW LAPFY GLA++L+VL+IKF+ E HLA+HAF+ +E+ ILGVLTLVDLALTGSLL+IVIFSGYENFVSKIDH+ H+DWP WMGTIDF+ALKLK+LSSIVAISA+QLLKQFM ++ + ++ +K LYW V+IH+VFV SSVLLALSDRIAG SH + P
Sbjct: 12 ENFLEQALFASRWLLAPFYFGLAISLIVLLIKFLAELGHLALHAFTLSESDAILGVLTLVDLALTGSLLIIVIFSGYENFVSKIDHTNHKDWPEWMGTIDFSALKLKMLSSIVAISAVQLLKQFMSLRTVTPEN----EKVLYWLVIIHVVFVVSSVLLALSDRIAGHGNSHGSSEP 184
BLAST of mRNA_P-wetherbeei_contig16667.1.1 vs. uniprot
Match: A0A2S5PEK3_HYPSQ (UPF0114 protein CTY20_01090 n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5PEK3_HYPSQ) HSP 1 Score: 228 bits (580), Expect = 1.920e-72 Identity = 119/178 (66.85%), Postives = 147/178 (82.58%), Query Frame = 1
Query: 40 ERCLFASRWFLAPFYLGLALALLVLMIKFIEEFWHLAIHAFSWTEAQVILGVLTLVDLALTGSLLVIVIFSGYENFVSKIDHSQHEDWPSWMGTIDFTALKLKLLSSIVAISAIQLLKQFMEVKELVGKDSAVADKQLYWYVVIHLVFVGSSVLLALSDRIAGSHDNGAPVPPLAGNG 573
E+ LFA+RW LAPFYLGL ++++VL++KF+ E +HL HAFS TE++VILGVL LVDLALTGSLL+IVIFSGYENFVSKIDHS H+DWP WMGTIDF ALKLKLLSSIVAISAIQLLK+FM +++ V +++++W V+IH+VFV SSVLLALSDRI+G AP P +G+G
Sbjct: 16 EQALFATRWLLAPFYLGLGISIVVLLLKFMAELFHLVTHAFSSTESEVILGVLALVDLALTGSLLIIVIFSGYENFVSKIDHSNHKDWPEWMGTIDFAALKLKLLSSIVAISAIQLLKKFMVIEK-------VGEREIFWLVIIHIVFVVSSVLLALSDRISGHGSGHAPPAPASGHG 186
BLAST of mRNA_P-wetherbeei_contig16667.1.1 vs. uniprot
Match: A0A120CUI3_HYPSL (UPF0114 protein APY04_2419 n=2 Tax=Hyphomicrobium sulfonivorans TaxID=121290 RepID=A0A120CUI3_HYPSL) HSP 1 Score: 225 bits (574), Expect = 9.560e-72 Identity = 118/175 (67.43%), Postives = 143/175 (81.71%), Query Frame = 1
Query: 19 QVAETVLERCLFASRWFLAPFYLGLALALLVLMIKFIEEFWHLAIHAFSWTEAQVILGVLTLVDLALTGSLLVIVIFSGYENFVSKIDHSQHEDWPSWMGTIDFTALKLKLLSSIVAISAIQLLKQFMEVKELVGKDSAVADKQLYWYVVIHLVFVGSSVLLALSDRIAGSHDNG 543
Q E ++E +FASRW LAPFYLGL+LAL+VL+IKFI E H+A AF+ TE+QVILG+L LVDL+LT SL++IVIFSGYENFVSKIDHS+H DWP WMGTIDFTALK+KLL SIVAISAIQLLKQFM V + V+D+ L+W V IH+VFV S +L+ALSDRI+G+H +G
Sbjct: 7 QQIERIIETVIFASRWILAPFYLGLSLALIVLLIKFIAELVHIAATAFTATESQVILGLLALVDLSLTASLIIIVIFSGYENFVSKIDHSEHRDWPEWMGTIDFTALKIKLLGSIVAISAIQLLKQFMSV-------NTVSDRDLFWLVTIHVVFVVSGLLMALSDRISGAHKSG 174
BLAST of mRNA_P-wetherbeei_contig16667.1.1 vs. uniprot
Match: UPI0012EC77C2 (TIGR00645 family protein n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI0012EC77C2) HSP 1 Score: 225 bits (573), Expect = 1.230e-71 Identity = 118/167 (70.66%), Postives = 141/167 (84.43%), Query Frame = 1
Query: 28 ETVLERCLFASRWFLAPFYLGLALALLVLMIKFIEEFWHLAIHAFSWTEAQVILGVLTLVDLALTGSLLVIVIFSGYENFVSKIDHSQHEDWPSWMGTIDFTALKLKLLSSIVAISAIQLLKQFMEVKELVGKDSAVADKQLYWYVVIHLVFVGSSVLLALSDRIAG 528
E LE +FASRW LAPFYLGLA++LLVL+IKF+ E +H+A HAFS TE++VILGVL LVDL LTGSLL+IVIFSGYENFVSKIDH+ H DWP WMGTIDF+ LKLKLLSSIVAISAIQLLKQFM ++ + ++++++W VVIH+VFV SSVLLALSDRI+G
Sbjct: 6 EKALEVLIFASRWILAPFYLGLAVSLLVLLIKFMAELFHIATHAFSATESEVILGVLALVDLTLTGSLLIIVIFSGYENFVSKIDHTGHRDWPEWMGTIDFSGLKLKLLSSIVAISAIQLLKQFMSIQNI-------SEREIFWLVVIHVVFVVSSVLLALSDRISG 165
BLAST of mRNA_P-wetherbeei_contig16667.1.1 vs. uniprot
Match: A0A7C2R0J0_9HYPH (UPF0114 protein ENR03_20725 n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2R0J0_9HYPH) HSP 1 Score: 224 bits (572), Expect = 1.530e-71 Identity = 124/176 (70.45%), Postives = 138/176 (78.41%), Query Frame = 1
Query: 1 MAVRFGQVAETVLERCLFASRWFLAPFYLGLALALLVLMIKFIEEFWHLAIHAFSWTEAQVILGVLTLVDLALTGSLLVIVIFSGYENFVSKIDHSQHEDWPSWMGTIDFTALKLKLLSSIVAISAIQLLKQFMEVKELVGKDSAVADKQLYWYVVIHLVFVGSSVLLALSDRIAG 528
M R Q E LE LFASRW LAPFYLGLA +++L+IKF++E +HLA A S TEA ILGVLTLVDLALTGSLL+IVIFSGYENFVSKIDHS+H DWP WMGTIDFTALK+KLL SIVAISAIQLLKQFM V+ +D+ L WYV IHLVFV SSVLLALS RI+G
Sbjct: 1 MLDRSRQTLENALEATLFASRWLLAPFYLGLAAGVVILLIKFLQELYHLAQIAVSGTEADAILGVLTLVDLALTGSLLLIVIFSGYENFVSKIDHSRHRDWPEWMGTIDFTALKIKLLGSIVAISAIQLLKQFMAVR-------TASDRDLIWYVAIHLVFVLSSVLLALSHRISG 169
BLAST of mRNA_P-wetherbeei_contig16667.1.1 vs. uniprot
Match: A0A6I3KUE4_9HYPH (UPF0114 protein GIW81_18380 n=1 Tax=Hyphomicrobium album TaxID=2665159 RepID=A0A6I3KUE4_9HYPH) HSP 1 Score: 223 bits (569), Expect = 4.360e-71 Identity = 124/178 (69.66%), Postives = 143/178 (80.34%), Query Frame = 1
Query: 28 ETVLERCLFASRWFLAPFYLGLALALLVLMIKFIEEFWHLAIHAFSWTEAQVILGVLTLVDLALTGSLLVIVIFSGYENFVSKIDHSQHEDWPSWMGTIDFTALKLKLLSSIVAISAIQLLKQFMEVKELVGKDSAVADKQLYWYVVIHLVFVGSSVLLALSDRIAGS-HDNGAPVPP 558
E +E +FASRW LAPFYLGLAL+L VL+IKF+ E H+A AF+ TE+QVILG+L LVDLALTGSL+VIVIFSGYENFVSKIDHS+H DWP WMGTIDFTALK+KLL SIVAISAIQLLKQFM + S V+D+ L+W VVIH+VFV SSVLLALSDRI+ S H + P P
Sbjct: 9 ERAMEAAIFASRWILAPFYLGLALSLFVLLIKFMFELVHIAETAFTATESQVILGLLALVDLALTGSLVVIVIFSGYENFVSKIDHSRHRDWPEWMGTIDFTALKIKLLGSIVAISAIQLLKQFMTI-------STVSDRDLFWLVVIHVVFVVSSVLLALSDRISASTHTSVEPATP 179
BLAST of mRNA_P-wetherbeei_contig16667.1.1 vs. uniprot
Match: UPI000931D9AE (TIGR00645 family protein n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI000931D9AE) HSP 1 Score: 223 bits (569), Expect = 4.660e-71 Identity = 119/174 (68.39%), Postives = 143/174 (82.18%), Query Frame = 1
Query: 13 FGQVAETVLERCLFASRWFLAPFYLGLALALLVLMIKFIEEFWHLAIHAFSWTEAQVILGVLTLVDLALTGSLLVIVIFSGYENFVSKIDHSQHEDWPSWMGTIDFTALKLKLLSSIVAISAIQLLKQFMEVKELVGKDSAVADKQLYWYVVIHLVFVGSSVLLALSDRIAGSH 534
F + E ++E +FASRW LAPFYLGLAL+L VL+IKF+ E H+A AF+ TE+QVILG+L LVDL+LTGSL+VIVIFSGYENFVSKIDH+ H DWP WMGTIDFTALK+KLL SIVAISAIQLLKQFM + + V+D+ L+W VVIH+VFV SSVLLALSDRI+G++
Sbjct: 4 FPKQIERLIETAIFASRWILAPFYLGLALSLFVLLIKFLFELVHIAEMAFTATESQVILGLLALVDLSLTGSLIVIVIFSGYENFVSKIDHTGHRDWPEWMGTIDFTALKIKLLGSIVAISAIQLLKQFMSI-------NTVSDRDLFWLVVIHVVFVASSVLLALSDRISGAN 170
BLAST of mRNA_P-wetherbeei_contig16667.1.1 vs. uniprot
Match: A0A6I0ER23_HYPSQ (UPF0114 protein F9K20_00530 n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0ER23_HYPSQ) HSP 1 Score: 223 bits (567), Expect = 9.370e-71 Identity = 120/169 (71.01%), Postives = 140/169 (82.84%), Query Frame = 1
Query: 28 ETVLERCLFASRWFLAPFYLGLALALLVLMIKFIEEFWHLAIHAFSWTEAQVILGVLTLVDLALTGSLLVIVIFSGYENFVSKIDHSQHEDWPSWMGTIDFTALKLKLLSSIVAISAIQLLKQFMEVKELVGKDSAVADKQLYWYVVIHLVFVGSSVLLALSDRIAGSH 534
E ++E +FASRW LAPFYLGLAL+L VL+IKF+ E H+A AFS TE+QVILG+L LVDLALTGSL+VIVIFSGYENFVSKIDH+ H DWP WMGTIDFTALK+KLL SIVAISAIQLLKQFM + S V+D+ L+W V+IH+VFV SSVLLALSDRI+ S+
Sbjct: 10 ERLIETAIFASRWILAPFYLGLALSLFVLLIKFVFELVHIAETAFSATESQVILGLLALVDLALTGSLVVIVIFSGYENFVSKIDHTGHRDWPEWMGTIDFTALKIKLLGSIVAISAIQLLKQFMSI-------STVSDRDLFWLVIIHVVFVISSVLLALSDRISASN 171 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16667.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16667.1.1 >prot_P-wetherbeei_contig16667.1.1 ID=prot_P-wetherbeei_contig16667.1.1|Name=mRNA_P-wetherbeei_contig16667.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=214bp MAVRFGQVAETVLERCLFASRWFLAPFYLGLALALLVLMIKFIEEFWHLAback to top mRNA from alignment at P-wetherbeei_contig16667:140..781+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16667.1.1 ID=mRNA_P-wetherbeei_contig16667.1.1|Name=mRNA_P-wetherbeei_contig16667.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=642bp|location=Sequence derived from alignment at P-wetherbeei_contig16667:140..781+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16667:140..781+ >mRNA_P-wetherbeei_contig16667.1.1 ID=mRNA_P-wetherbeei_contig16667.1.1|Name=mRNA_P-wetherbeei_contig16667.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=642bp|location=Sequence derived from alignment at P-wetherbeei_contig16667:140..781+ (Phaeothamnion wetherbeei SAG_119_79)back to top |