mRNA_P-wetherbeei_contig16664.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16664.1.1
Unique NamemRNA_P-wetherbeei_contig16664.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16664.1.1 vs. uniprot
Match: A0A1H4TCE1_9HYPH (Tripartite-type tricarboxylate transporter, receptor component TctC n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1H4TCE1_9HYPH)

HSP 1 Score: 348 bits (892), Expect = 1.190e-116
Identity = 173/294 (58.84%), Postives = 224/294 (76.19%), Query Frame = 1
Query:    1 YDFFGRLVARHIGRHIPGAPSTTPNSMPGAGSFTAANWLYSAAPKDGTAIAIVSQTMAIEEVLQNPAVKFKAAQFNWIGRATNIVEIGFVSDKSKAVTIADAKIHEIPVAGTGPGSPSEGYPRLLNALAGTRFKIIGGFRGSTEGMLAVERGEVDGALTSWQTMKVTRKAEYDQGKLRVLVQYALQREADLP-VPAVVELASNDGDRALLAFYASGGAVGRSFLAPPGVPADRVAALRRAFDAMMKDKEFIADVEKAKAEFNPMTGENLQKLIADTATVAPAVVERMRLLLDIK 879
            YD FGR+++R++G+H+PG P+   ++MPGAGS TAANWLY  APKDGT+IAIV+QT+A EE L+N AV++K A+FNWIGRAT+ +E+  +S +SK  T+   K  E+P A TGPGSPSE YP+LLNALAGT+FKII G+ GST+G+LA+ERGEVD ALTSW TMK TR       K  V +QY L+R  DL  VPAV E A+ND DRALLAF AS   +GR+F+APPGVPADRV ALR AF A MKD + +A++EKAK +F+P +GE +QK++AD   V+P +V RM  +L ++
Sbjct:   48 YDLFGRMLSRYLGKHVPGKPTVIASNMPGAGSLTAANWLYRVAPKDGTSIAIVAQTIAQEEALKNKAVQYKTAEFNWIGRATSNIEVQIISTRSKGTTMQGMKEVEVPTASTGPGSPSESYPKLLNALAGTKFKIIRGYPGSTDGLLAMERGEVDAALTSWNTMKTTRMDWLTGKKAAVAIQYVLERSPDLKDVPAVTEFATNDADRALLAFAASSADIGRAFMAPPGVPADRVKALREAFTATMKDPDLVAEIEKAKLDFDPASGEVVQKIVADVIGVSPEIVARMEKILAVE 341          
BLAST of mRNA_P-wetherbeei_contig16664.1.1 vs. uniprot
Match: A0A7C9GG72_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C9GG72_9PROT)

HSP 1 Score: 293 bits (750), Expect = 3.770e-95
Identity = 147/288 (51.04%), Postives = 205/288 (71.18%), Query Frame = 1
Query:    1 YDFFGRLVARHIGRHIPGAPSTTPNSMPGAGSFTAANWLYSAAPKDGTAIAIVSQTMAIEEVLQNPAVKFKAAQFNWIGRATNIVEIGFVSDKSKAVTIADAKIHEIPVAGTGPGSPSEGYPRLLNALAGTRFKIIGGFRGSTEGMLAVERGEVDGALTSWQTMKVTRKAEYDQGKLRVLVQYALQREADLP-VPAVVELASNDGDRALLAFYASGGAVGRSFLAPPGVPADRVAALRRAFDAMMKDKEFIADVEKAKAEFNPMTGENLQKLIADTATVAPAVVERMR 861
            YD +GRL ARHIGRHI G+P+    +MPGAGS   AN+LY+ APK+G+ + ++SQ+   EE L    V +++ +FNWIGR T+ VE+  V   SK  T+ DAK  E+ VAGTGP S S  YP++LN +AGT+FK+I G+ GS EG+LA+ERGE  GAL SW ++K TR++     K+ VLVQYA +R  DLP VPA+ EL S   +R +LA YASG  +GR+  APPGVP +RV ALR+AF+ M++D +F+A+V+K   EF+P+TGE LQK++++  ++ P++V R R
Sbjct:   49 YDLYGRLAARHIGRHILGSPTVVAQNMPGAGSLKLANFLYNVAPKNGSVLGVISQSTPQEEALGTSGVSYESNKFNWIGRITSNVELSVVWHTSKIQTVEDAKTREVTVAGTGPTSASVVYPKVLNGVAGTKFKVISGYGGSAEGVLAMERGETMGALLSWASLKSTRRSWLADKKVFVLVQYAPKRHGDLPDVPAMTELGSTPDERRILALYASGAEIGRAITAPPGVPPERVKALRKAFEDMIRDGDFLAEVKKRNIEFDPLTGEELQKVVSEAGSIPPSLVARAR 336          
BLAST of mRNA_P-wetherbeei_contig16664.1.1 vs. uniprot
Match: A0A1Q7BLD6_9PROT (Uncharacterized protein n=2 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7BLD6_9PROT)

HSP 1 Score: 270 bits (690), Expect = 4.570e-86
Identity = 133/288 (46.18%), Postives = 197/288 (68.40%), Query Frame = 1
Query:    1 YDFFGRLVARHIGRHIPGAPSTTPNSMPGAGSFTAANWLYSAAPKDGTAIAIVSQTMAIEEVLQNPAVKFKAAQFNWIGRATNIVEIGFVSDKSKAVTIADAKIHEIPVAGTGPGSPSEGYPRLLNALAGTRFKIIGGFRGSTEGMLAVERGEVDGALTSWQTMKVTRKAEYDQGKLRVLVQYALQREADLP-VPAVVELASNDGDRALLAFYASGGAVGRSFLAPPGVPADRVAALRRAFDAMMKDKEFIADVEKAKAEFNPMTGENLQKLIADTATVAPAVVERMR 861
            YD +GR+VARH+G+HIPG P+    +MPGAGS  AAN+LY  APKDGTA+ ++ ++ A+E+ L NPAV++ A +F ++GR      I      ++  ++ DAK  E  +AGTGPGS +E  PRLLNA+ GT+FK+I G+  S+E MLA+ERGEVDGA +SW  +KV ++A   + K+R+++Q   +R ++LP  P++ E+     D+ + A YASG A+GRS L PPG+PA+R  ALR AF AM KD +F+A++++   E +PM GE +++L+A +     AV ER +
Sbjct:   49 YDLYGRMVARHLGKHIPGQPTVIAQNMPGAGSLKAANYLYELAPKDGTALGMIVESAALEQALANPAVQYDAGKFTYLGRVATSNNIFMQWHTARVQSLEDAKRIETSLAGTGPGSIAETVPRLLNAVIGTKFKLISGYPASSEAMLAMERGEVDGASSSWAAVKVGKQAWLRENKIRIILQTTPERISELPHTPSLGEIGDTPEDKQVFALYASGSAIGRSLLGPPGIPAERAQALRTAFQAMAKDPDFVAEIQRLSVELDPMPGEQIERLVAQSLNTPAAVRERAK 336          
BLAST of mRNA_P-wetherbeei_contig16664.1.1 vs. uniprot
Match: A0A1Q4BHT1_9HYPH (Uncharacterized protein n=1 Tax=Rhizobiales bacterium 62-17 TaxID=1895810 RepID=A0A1Q4BHT1_9HYPH)

HSP 1 Score: 259 bits (663), Expect = 5.110e-82
Identity = 133/288 (46.18%), Postives = 189/288 (65.62%), Query Frame = 1
Query:    1 YDFFGRLVARHIGRHIPGAPSTTPNSMPGAGSFTAANWLYSAAPKDGTAIAIVSQTMAIEEVLQNPAVKFKAAQFNWIGRATNIVEIGFVSDKSKAVTIADAKIHEIPVAGTGPGSPSEGYPRLLNALAGTRFKIIGGFRGSTEGMLAVERGEVDGALTSWQTMKVTRKAEYDQGKLRVLVQYALQREADLP-VPAVVELASNDGDRALLAFYASGGAVGRSFLAPPGVPADRVAALRRAFDAMMKDKEFIADVEKAKAEFNPMTGENLQKLIADTATVAPAVVERMR 861
            YD + RLVAR +G+H+PG P+  P +MPGAGS  AAN++Y+ APKDGTAIA + +T+A+E+ LQNP V++ A +  WIGR  +   I  V   +KA ++ D K  E+ VAGTGP + +E  P+LLN + GT+FKI+ G+  S   MLA+ERGEVDG  TSW  +K   +A     K+R+++Q   +R+ +LP VPA+VELA ND DR LL  YASGGA+GR++ APP +P    AALR +F  M +D + +AD  K +    P   + LQ+++  T  V   + +R+R
Sbjct:   47 YDLYARLVARFLGKHMPGQPAIVPQNMPGAGSLQAANYIYAVAPKDGTAIAALGETIAMEQALQNPGVRYDATKLTWIGRIASSNNIHLVWHSAKAQSMEDVKSIEMSVAGTGPANLAETVPKLLNNVLGTKFKIVSGYPSSGPAMLAMERGEVDGTATSWAVVKAQHQAWLKDKKVRIILQDVPERDPELPDVPALVELAKNDADRQLLTLYASGGAIGRAYTAPPDLPTAAAAALRDSFQKMTQDPDLLADAAKMQVSIEPADHKLLQQVVEQTVKVDDNIRKRVR 334          
BLAST of mRNA_P-wetherbeei_contig16664.1.1 vs. uniprot
Match: A0A537U0Q4_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537U0Q4_9PROT)

HSP 1 Score: 258 bits (658), Expect = 3.820e-81
Identity = 132/287 (45.99%), Postives = 189/287 (65.85%), Query Frame = 1
Query:    4 DFFGRLVARHIGRHIPGAPSTTPNSMPGAGSFTAANWLYSAAPKDGTAIAIVSQTMAIEEVLQNPAVKFKAAQFNWIGRATNIVEIGFVSDKSKAVTIADAKIHEIPVAGTGPGSPSEGYPRLLNALAGTRFKIIGGFRGSTEGMLAVERGEVDGALTSWQTMKVTRKAEYDQGKLRVLVQYALQREADLP-VPAVVELASNDGDRALLAFYASGGAVGRSFLAPPGVPADRVAALRRAFDAMMKDKEFIADVEKAKAEFNPMTGENLQKLIADTATVAPAVVERMR 861
            D  GRL+ARH+GRHIPG P+  P + PGAGSF A N +++ +PKDGT I I + T+A++E L    V+FK A+ NWIGR  ++V I F+   S   T ADA+  +  ++ TG GS +  YP ++N +  T+FK++ G++GS+E MLAVERGEV+G  TSW  +KV          + +LVQ+AL+R ADLP +P  V+LA ND +RA+L    +   VG +F   PGVPADR+ ALRRA DA ++D E +AD  K     +PM GE LQ L+A+ + + PA+++++R
Sbjct:   53 DTLGRLLARHLGRHIPGKPTIVPKNQPGAGSFLAVNTIFNVSPKDGTVIGIGAPTIALDEKLGTQGVRFKTAELNWIGRLDSLVNIVFMWKTSPVKTFADAQKFQSSLSATGVGSTASIYPTVMNNVFETKFKLVMGYKGSSEAMLAVERGEVEGHSTSWTALKVAHPDWLRDRNVSILVQFALKRHADLPDIPTAVDLARNDEERAILRAIMNATEVGTAFFTTPGVPADRLTALRRAVDAALRDPELLADAHKINVGISPMAGEELQTLVAEVSKLPPALLDKVR 339          
BLAST of mRNA_P-wetherbeei_contig16664.1.1 vs. uniprot
Match: A0A6N7GSQ6_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GSQ6_9HYPH)

HSP 1 Score: 258 bits (660), Expect = 8.240e-81
Identity = 130/287 (45.30%), Postives = 189/287 (65.85%), Query Frame = 1
Query:    4 DFFGRLVARHIGRHIPGAPSTTPNSMPGAGSFTAANWLYSAAPKDGTAIAIVSQTMAIEEVLQNPAVKFKAAQFNWIGRATNIVEIGFVSDKSKAVTIADAKIHEIPVAGTGPGSPSEGYPRLLNALAGTRFKIIGGFRGSTEGMLAVERGEVDGALTSWQTMKVTRKAEYDQGKLRVLVQYALQREADLP-VPAVVELASNDGDRALLAFYASGGAVGRSFLAPPGVPADRVAALRRAFDAMMKDKEFIADVEKAKAEFNPMTGENLQKLIADTATVAPAVVERMR 861
            D + R +ARH+G+HIPG P+  P +MPGAGSF A N +YS APKDGT +A+ + T+A++E L    V+FK A+F W+GR  +++ I F+   SK  T ADA+ +E  ++GTG GS    YP ++N +  T+FK++ G++GS    LAVERGEV+G  TSW  +KV     +   K+ +LVQ+ L+R  +LP +P  V+LA +D ++  L+   +   +G +F   PGVP DR+AALRRAFDA MKD EF+AD  K K    PMTGE LQKL+   + ++P ++ ++R
Sbjct:  103 DTYARALARHLGKHIPGRPNVVPKNMPGAGSFLAVNNVYSVAPKDGTVLALGAPTLALDERLGTSNVRFKTAEFGWVGRVDSLINIVFMWHTSKVKTFADAQKYESTLSGTGAGSTVSIYPTVMNNVFKTKFKLVMGYKGSAAAQLAVERGEVEGHSTSWTAVKVGHPDWWPTKKISILVQFGLKRHPELPGIPTAVDLARDDDEKQALSAIMAASEIGTAFFTAPGVPPDRLAALRRAFDATMKDPEFLADTAKIKLTVGPMTGEALQKLVTSVSNLSPEMLAKVR 389          
BLAST of mRNA_P-wetherbeei_contig16664.1.1 vs. uniprot
Match: A0A537T587_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537T587_9PROT)

HSP 1 Score: 257 bits (657), Expect = 1.790e-80
Identity = 131/287 (45.64%), Postives = 189/287 (65.85%), Query Frame = 1
Query:    4 DFFGRLVARHIGRHIPGAPSTTPNSMPGAGSFTAANWLYSAAPKDGTAIAIVSQTMAIEEVLQNPAVKFKAAQFNWIGRATNIVEIGFVSDKSKAVTIADAKIHEIPVAGTGPGSPSEGYPRLLNALAGTRFKIIGGFRGSTEGMLAVERGEVDGALTSWQTMKVTRKAEYDQGKLRVLVQYALQREADLP-VPAVVELASNDGDRALLAFYASGGAVGRSFLAPPGVPADRVAALRRAFDAMMKDKEFIADVEKAKAEFNPMTGENLQKLIADTATVAPAVVERMR 861
            D  GRL+ARH+G+HIPG P+  P + PGAGSF A N +++ +PKDGT I I + T+ ++E L    V+FK A+ NWIGR  ++V + F+   S   T ADA+  +  ++GTG GS    YP ++N ++GT+FK++ G++GS+E MLAVERGEV+G  TSW  +KV          + +LVQ+AL+R  +LP VP  V+LA  D +RA+L    +   VG +F   PGVPADR+ ALRRAFDA M D E +AD +K     +PM GE LQ L+A+ + ++PA++ ++R
Sbjct:   95 DTLGRLLARHLGKHIPGNPTLVPKNQPGAGSFLAVNTIFNVSPKDGTVIGIGAPTIPLDEKLGTHGVRFKTAELNWIGRLDSLVNVVFMWKTSPVKTFADAQKFQATLSGTGVGSTVSIYPTVMNNVSGTKFKLVMGYKGSSEAMLAVERGEVEGHSTSWTALKVAHPDWLRDRSVTILVQFALKRHGELPDVPTAVDLARTDEERAILGAIMNATEVGTAFFTTPGVPADRLTALRRAFDATMTDAELLADAQKIHVGVSPMPGEELQALVAEVSNLSPALLSKVR 381          
BLAST of mRNA_P-wetherbeei_contig16664.1.1 vs. uniprot
Match: A0A1Q7BSA3_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium 13_2_20CM_2_64_7 TaxID=1803507 RepID=A0A1Q7BSA3_9PROT)

HSP 1 Score: 256 bits (653), Expect = 2.040e-80
Identity = 132/287 (45.99%), Postives = 187/287 (65.16%), Query Frame = 1
Query:    4 DFFGRLVARHIGRHIPGAPSTTPNSMPGAGSFTAANWLYSAAPKDGTAIAIVSQTMAIEEVLQNPAVKFKAAQFNWIGRATNIVEIGFVSDKSKAVTIADAKIHEIPVAGTGPGSPSEGYPRLLNALAGTRFKIIGGFRGSTEGMLAVERGEVDGALTSWQTMKVTRKAEYDQGKLRVLVQYALQREADLP-VPAVVELASNDGDRALLAFYASGGAVGRSFLAPPGVPADRVAALRRAFDAMMKDKEFIADVEKAKAEFNPMTGENLQKLIADTATVAPAVVERMR 861
            D  GRLVARH+ +HIPG P+  P + PGAGSF A N +++ +PKDGT I I + T+A++E L    V+FK A+ NWIGR  ++V I F+   S   T A A+  +  ++ TG GS    YP ++N + GT+FK+I G++GS+E MLAVERGE +G  TSW  +KV        G + +LVQ+AL+R ADLP +P  V+LA ND +RA++    +   VG +F   PGVPADR+  LRRAFDA + D E +A+ EK     +PMTGE LQ L+A+ + + P ++E++R
Sbjct:   51 DTLGRLVARHLSKHIPGKPTVVPKNQPGAGSFLAVNAIFNVSPKDGTVIGIGAPTIALDEKLGTQGVRFKTAELNWIGRLDSLVNIVFMWKTSPVKTFAAAQKFQSTLSATGIGSTVSIYPTVMNNVFGTKFKLIMGYKGSSEAMLAVERGEAEGHSTSWTALKVAHPDWLRDGNVTILVQFALKRHADLPDIPTAVDLARNDEERAIVRAIMNATEVGTAFFTTPGVPADRLTTLRRAFDATVTDPELLAEAEKIHVGVSPMTGEELQTLVAEVSNLPPGLLEKVR 337          
BLAST of mRNA_P-wetherbeei_contig16664.1.1 vs. uniprot
Match: A0A6N7GSX7_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GSX7_9HYPH)

HSP 1 Score: 255 bits (652), Expect = 3.360e-80
Identity = 129/286 (45.10%), Postives = 190/286 (66.43%), Query Frame = 1
Query:    1 YDFFGRLVARHIGRHIPGAPSTTPNSMPGAGSFTAANWLYSAAPKDGTAIAIVSQTMAIEEVLQNPAVKFKAAQFNWIGRATNIVEIGFVSDKSKAVTIADAKIHEIPVAGTGPGSPSEGYPRLLNALAGTRFKIIGGFRGSTEGMLAVERGEVDGALTSWQTMKVTRKAEYDQGKLRVLVQYALQREADLP-VPAVVELASNDGDRALLAFYASGGAVGRSFLAPPGVPADRVAALRRAFDAMMKDKEFIADVEKAKAEFNPMTGENLQKLIADTATVAPAVVER 855
            YD++ R+ ARH+G++IPG P+    +MPGAGS  AAN+LY+ APKDGT + +V+QT+ +E  L  P+VK+ A +F+++GR T ++E      ++ A TI +A+ HE+   GTGP SP+EGYPRLLNA AGT+F+++ GF G++E MLA+ER EVD    SW ++  T+K      K+ VL+Q  + R   LP VP +VE+ +    +A LAFY S   V RS +  PG+PADR+ ALR AF    +D EF+A+++K+++EF+P  GE L+ L    A     +V+R
Sbjct:   58 YDYYARVFARHMGKYIPGNPTVVVQNMPGAGSLRAANYLYNVAPKDGTHLGVVTQTVMLEAPLGTPSVKYNAVEFSYVGRMTAVLETMIGWHEAPAKTIYEARKHEMIAGGTGPTSPTEGYPRLLNAFAGTKFRVVSGFGGTSEIMLAMERREVDALENSWNSIVRTKKDWLTTKKINVLIQAVMTRSKQLPDVPTLVEMGTTPEAKAALAFYTSAAEVSRSLIGTPGIPADRLKALREAFQQTTRDPEFLAEIKKSQSEFDPAPGEYLEDLAKKIAATPKEIVQR 343          
BLAST of mRNA_P-wetherbeei_contig16664.1.1 vs. uniprot
Match: A0A127EW22_9HYPH (Tripartite tricarboxylate transporter family receptor n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EW22_9HYPH)

HSP 1 Score: 251 bits (642), Expect = 7.750e-79
Identity = 128/293 (43.69%), Postives = 192/293 (65.53%), Query Frame = 1
Query:    4 DFFGRLVARHIGRHIPGAPSTTPNSMPGAGSFTAANWLYSAAPKDGTAIAIVSQTMAIEEVLQNPAVKFKAAQFNWIGRATNIVEIGFVSDKSKAVTIADAKIHEIPVAGTGPGSPSEGYPRLLNALAGTRFKIIGGFRGSTEGMLAVERGEVDGALTSWQTMKVTRKAEYDQGKLRVLVQYALQREADLP-VPAVVELASNDGDRALLAFYASGGAVGRSFLAPPGVPADRVAALRRAFDAMMKDKEFIADVEKAKAEFNPMTGENLQKLIADTATVAPAVVERMRLLLDIK 879
            D + RL+ R++G+HIPG P+  P + PGAGSF A  ++Y+ APKDG+ I I + T  ++E L    V+FKAA+FNWIGR  +++ + F+   +   TI DA   E  ++GTG GS    YP ++N + GT+FK+I G++GS++  LAVERGEV+G  TSW  +KV       + K+ V+VQ++++R  ++  VP VVELA  D  R +L+   +   +G +F   PG P DRV ALRRAFDA MKD EF+A+ E+ K    P+TGE LQK++A+ +T+ P +VE+++   ++K
Sbjct:   47 DIYARLLGRYLGKHIPGNPTIVPQNRPGAGSFLALAYVYNVAPKDGSVIGIGAPTAPLDEKLGTQGVRFKAAEFNWIGRIDSLINMVFLWHTAPVKTIEDAFKIESKLSGTGVGSTVAIYPTVMNNVLGTKFKLIMGYKGSSDAQLAVERGEVEGHSTSWTAVKVAHPDWRPEKKINVVVQFSVKRHPEMADVPTVVELAKTDEQRKILSAVVNAAEIGTAFFTTPGAPPDRVEALRRAFDATMKDPEFLAEAERLKLTVGPLTGEELQKVVAEVSTLTPELVEKVKAAYEMK 339          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16664.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1H4TCE1_9HYPH1.190e-11658.84Tripartite-type tricarboxylate transporter, recept... [more]
A0A7C9GG72_9PROT3.770e-9551.04Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A1Q7BLD6_9PROT4.570e-8646.18Uncharacterized protein n=2 Tax=unclassified Alpha... [more]
A0A1Q4BHT1_9HYPH5.110e-8246.18Uncharacterized protein n=1 Tax=Rhizobiales bacter... [more]
A0A537U0Q4_9PROT3.820e-8145.99Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A6N7GSQ6_9HYPH8.240e-8145.30Uncharacterized protein n=1 Tax=Hyphomicrobiales b... [more]
A0A537T587_9PROT1.790e-8045.64Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A1Q7BSA3_9PROT2.040e-8045.99Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A6N7GSX7_9HYPH3.360e-8045.10Uncharacterized protein n=1 Tax=Hyphomicrobiales b... [more]
A0A127EW22_9HYPH7.750e-7943.69Tripartite tricarboxylate transporter family recep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16664contigP-wetherbeei_contig16664:1..882 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1144310.PMI07_005447
PFAMsTctC
Model size882
Max annot lvl1224|Proteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.23e-55
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1N8DG@1224|Proteobacteria,2VFU9@28211|Alphaproteobacteria,4BNCX@82115|Rhizobiaceae
DescriptionTripartite tricarboxylate transporter family receptor
Cds size882
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186093.4407966-CDS-P-wetherbeei_contig16664:0..8821683186093.4407966-CDS-P-wetherbeei_contig16664:0..882Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16664 1..882 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16664.1.1prot_P-wetherbeei_contig16664.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16664 1..882 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16664.1.1

>prot_P-wetherbeei_contig16664.1.1 ID=prot_P-wetherbeei_contig16664.1.1|Name=mRNA_P-wetherbeei_contig16664.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=294bp
YDFFGRLVARHIGRHIPGAPSTTPNSMPGAGSFTAANWLYSAAPKDGTAI
AIVSQTMAIEEVLQNPAVKFKAAQFNWIGRATNIVEIGFVSDKSKAVTIA
DAKIHEIPVAGTGPGSPSEGYPRLLNALAGTRFKIIGGFRGSTEGMLAVE
RGEVDGALTSWQTMKVTRKAEYDQGKLRVLVQYALQREADLPVPAVVELA
SNDGDRALLAFYASGGAVGRSFLAPPGVPADRVAALRRAFDAMMKDKEFI
ADVEKAKAEFNPMTGENLQKLIADTATVAPAVVERMRLLLDIK*
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mRNA from alignment at P-wetherbeei_contig16664:1..882+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16664.1.1 ID=mRNA_P-wetherbeei_contig16664.1.1|Name=mRNA_P-wetherbeei_contig16664.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=882bp|location=Sequence derived from alignment at P-wetherbeei_contig16664:1..882+ (Phaeothamnion wetherbeei SAG_119_79)
TATGACTTCTTCGGGCGCCTCGTGGCACGCCATATCGGCCGCCACATTCC GGGCGCACCGAGCACGACACCGAACTCGATGCCGGGGGCGGGAAGCTTCA CGGCCGCCAACTGGCTCTATTCCGCCGCACCCAAGGACGGCACCGCGATC GCCATCGTCTCGCAGACGATGGCCATCGAGGAGGTACTGCAAAACCCCGC CGTGAAGTTCAAGGCGGCGCAATTCAACTGGATCGGACGGGCGACTAACA TCGTGGAGATCGGGTTCGTCAGCGACAAGTCGAAGGCAGTCACGATCGCG GATGCGAAAATCCACGAAATTCCGGTCGCCGGCACGGGGCCTGGCTCGCC GTCGGAGGGCTATCCGCGCCTCCTCAATGCGCTCGCGGGCACCAGGTTCA AGATCATCGGCGGCTTTCGCGGCTCGACCGAGGGTATGCTCGCGGTCGAG CGCGGCGAAGTCGATGGCGCGCTGACGTCGTGGCAGACGATGAAGGTCAC GCGCAAGGCAGAGTACGACCAGGGCAAGTTGCGCGTGCTCGTTCAATACG CGCTGCAGCGCGAGGCGGACCTGCCGGTTCCCGCAGTCGTGGAACTGGCG AGCAACGATGGCGACCGCGCGCTGCTGGCGTTCTACGCCTCGGGTGGCGC GGTCGGACGATCGTTCTTGGCGCCTCCGGGTGTTCCTGCCGACCGCGTCG CGGCGCTGCGGCGTGCATTCGACGCGATGATGAAGGACAAGGAATTCATC GCCGACGTGGAGAAGGCCAAGGCCGAGTTCAATCCGATGACGGGCGAGAA CCTGCAAAAGTTGATTGCGGACACGGCGACCGTCGCGCCGGCCGTGGTAG AGCGCATGCGCCTGCTCCTCGACATCAAGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16664:1..882+

>mRNA_P-wetherbeei_contig16664.1.1 ID=mRNA_P-wetherbeei_contig16664.1.1|Name=mRNA_P-wetherbeei_contig16664.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=882bp|location=Sequence derived from alignment at P-wetherbeei_contig16664:1..882+ (Phaeothamnion wetherbeei SAG_119_79)
TATGACTTCTTCGGGCGCCTCGTGGCACGCCATATCGGCCGCCACATTCC
GGGCGCACCGAGCACGACACCGAACTCGATGCCGGGGGCGGGAAGCTTCA
CGGCCGCCAACTGGCTCTATTCCGCCGCACCCAAGGACGGCACCGCGATC
GCCATCGTCTCGCAGACGATGGCCATCGAGGAGGTACTGCAAAACCCCGC
CGTGAAGTTCAAGGCGGCGCAATTCAACTGGATCGGACGGGCGACTAACA
TCGTGGAGATCGGGTTCGTCAGCGACAAGTCGAAGGCAGTCACGATCGCG
GATGCGAAAATCCACGAAATTCCGGTCGCCGGCACGGGGCCTGGCTCGCC
GTCGGAGGGCTATCCGCGCCTCCTCAATGCGCTCGCGGGCACCAGGTTCA
AGATCATCGGCGGCTTTCGCGGCTCGACCGAGGGTATGCTCGCGGTCGAG
CGCGGCGAAGTCGATGGCGCGCTGACGTCGTGGCAGACGATGAAGGTCAC
GCGCAAGGCAGAGTACGACCAGGGCAAGTTGCGCGTGCTCGTTCAATACG
CGCTGCAGCGCGAGGCGGACCTGCCGGTTCCCGCAGTCGTGGAACTGGCG
AGCAACGATGGCGACCGCGCGCTGCTGGCGTTCTACGCCTCGGGTGGCGC
GGTCGGACGATCGTTCTTGGCGCCTCCGGGTGTTCCTGCCGACCGCGTCG
CGGCGCTGCGGCGTGCATTCGACGCGATGATGAAGGACAAGGAATTCATC
GCCGACGTGGAGAAGGCCAAGGCCGAGTTCAATCCGATGACGGGCGAGAA
CCTGCAAAAGTTGATTGCGGACACGGCGACCGTCGCGCCGGCCGTGGTAG
AGCGCATGCGCCTGCTCCTCGACATCAAGTAG
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