prot_P-wetherbeei_contig16660.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16660.1.1
Unique Nameprot_P-wetherbeei_contig16660.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length313
Homology
BLAST of mRNA_P-wetherbeei_contig16660.1.1 vs. uniprot
Match: A0A4D9D7G3_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7G3_9STRA)

HSP 1 Score: 106 bits (265), Expect = 7.030e-22
Identity = 76/194 (39.18%), Postives = 101/194 (52.06%), Query Frame = 0
Query:  141 DLPRRCICALGPLFGHLRRFRLARVF-QRPTLTPFASAA-YVALDAVTLRDLEV------LACQADG-------REAGSLLWLLNRTATPGGYRTLREWVTRPLLQRDAILARQEAVTALAFDPPRALEP---LLATLKRGGCG------GGGAVGGGNLDASIASLHHRNIHPRRLHTLLTVAAALAAALPPP 310
              P  C+  LGPL  HL+ + ++R+   RP+  PF   A ++ LD VTLRDLE+      L+ Q  G       +E GSL W LN+T+T  G R LREWV +PL++++ I  R +AV  LAF  P  LE    L+A   R   G       GG  G  +L   + +L +  I PRRL  LL     L  ALPPP
Sbjct:  202 SFPAPCLAVLGPLLLHLQEYGMSRLLLSRPSFQPFLRPALHMTLDGVTLRDLEIFSTPRGLSGQGGGEGGREGEQEEGSLFWFLNQTSTSYGSRLLREWVRKPLMRKEDIEGRLDAVEELAFALPPCLEEDGGLVAGFFRAKGGRRARGRAGGRKGFADLGTLVTALRYHKIVPRRLFLLLQTLECLLLALPPP 395          
BLAST of mRNA_P-wetherbeei_contig16660.1.1 vs. uniprot
Match: D7FYL3_ECTSI (MutS protein homolog 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYL3_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 3.150e-19
Identity = 100/320 (31.25%), Postives = 129/320 (40.31%), Query Frame = 0
Query:   16 LSRASERLLERYRETAVDASGRPRVVRTDRVPTEAFDFDEAYAELAEYCAG-------DANGGXXXXXXXGGGSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSGAMVN--------TLGPVAATTVLDLPRR--------CICALGPLFGHLRRFRLARVFQRPTLTPFASAAYVALDAVTLRDLEVLACQADGREAGSLLWLLNRTATPGGYRTLREWVTRPLLQRDAILARQEAVTALAFDPPRALEPLLATLKRGGCGGGGAVGGGNLDASIASLHHRNIHPRRLHTLLTVAAALAAALPPPDA 312
            LS+ +E  + RY E+AVDA G  RVVRT+R+P E F F+ A A L++Y          DA+ G      X GG                                          S    +        TL  +  +T + LPR+        C   L  +           V          S    A + +      VL CQADGREAGSL  +L+RT T  G R L  WV +PLL  + I ARQ+AV  L  DPP  +E L  TL+             +LD +IASLHHR I P RL +LL     +     PP A
Sbjct:  660 LSKETEATVARYCESAVDARGDRRVVRTERLPPEDFCFEAAQASLSKYYGKGRGSSKPDASEGEKDGNGXXGGDGCAPVLTRVLDLPRPAICALGPLMTHLERFGLDRSLASPDLSSFSKSQYMTLDAVTLRDLEVSTTVVLPRKDAIVFVAACCLVLSGVTSFSSLVPPGEVGGAEQKIGSWSTDSRAPEVIP----SVLQCQADGREAGSLFSILDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEELVTDPPSVMERLRPTLRDLK----------DLDPAIASLHHRRIQPNRLLSLLGTMRKVFGVFHPPTA 965          
BLAST of mRNA_P-wetherbeei_contig16660.1.1 vs. uniprot
Match: A0A7S4PJ16_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PJ16_GUITH)

HSP 1 Score: 95.5 bits (236), Expect = 4.300e-18
Identity = 63/168 (37.50%), Postives = 91/168 (54.17%), Query Frame = 0
Query:  131 LGPVAATTVLDLPRRCICALGPLFGHLRRFRLARVFQRPT-LTPFASAAYVALDAVTLRDLEVLACQADGREAGSLLWLLNRTATPGGYRTLREWVTRPLLQRDAILARQEAVTALAFDPPRALEPLLATLKRGGCGGGGAVGGGNLDASIASLHHRNIHPRRLHTLL 297
            +G     +V+ LP   I  LG L  +L+ F+L  V Q  T    F+S +++ L +  L +LE+L+ Q +G E GSLLWLL +T T  G R LR+W+T PLL ++ I+AR EAV  L  DP   L+ L   L+          G  +L+ ++A LH+    P  L  LL
Sbjct:  349 IGGAGLKSVMQLPAAVISCLGGLLHYLKEFKLESVLQLTTNFWKFSSPSHMQLSSSVLSNLELLSTQ-EGSEHGSLLWLLKQTRTAFGARLLRQWITHPLLDKERIVARHEAVEELMLDPAP-LDELQQQLR----------GLPDLERALARLHYHKSAPNELLLLL 504          
BLAST of mRNA_P-wetherbeei_contig16660.1.1 vs. uniprot
Match: A0A3B3SYK6_9TELE (DNA mismatch repair protein n=3 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3SYK6_9TELE)

HSP 1 Score: 90.5 bits (223), Expect = 2.130e-16
Identity = 60/171 (35.09%), Postives = 87/171 (50.88%), Query Frame = 0
Query:  137 TTVLDLPRRCICALGPLFGHLRRFRLARVFQRPTLTPFASAA--YVALDAVTLRDLEVLACQADGREAGSLLWLLNRTATPGGYRTLREWVTRPLLQRDAILARQEAVTALAFDPPRALEPLLATLKRGGCGGGGAVGGGNLDASIASLHHRNIHPRRLHTLLTVAAALAA 305
            ++V+ +    IC LGP+  +L  F L RV    +     S A   + L A T+R+LEVL  Q DGR  GSLLW+L+ T TP G R L++WVT+PL     I  RQEAV  +       L  + A LKR            +L+  I S++H+    +  + + +  + LAA
Sbjct:  457 SSVISMETPVICCLGPVIQYLTEFNLERVLLSASSFRRLSCADDCMMLSATTMRNLEVLCNQTDGRIRGSLLWVLDHTQTPFGKRLLKKWVTQPLKSAAEIRERQEAVAEILSSDSSVLLNVQALLKRLP----------DLERGICSIYHKKCSTQEFYLITSTLSRLAA 617          
BLAST of mRNA_P-wetherbeei_contig16660.1.1 vs. uniprot
Match: Q4RUX4_TETNG ((spotted green pufferfish) hypothetical protein (Fragment) n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=Q4RUX4_TETNG)

HSP 1 Score: 90.1 bits (222), Expect = 2.340e-16
Identity = 59/173 (34.10%), Postives = 90/173 (52.02%), Query Frame = 0
Query:  137 TTVLDLPRRCICALGPLFGHLRRFRLARVFQRPTLTPFASAAY--VALDAVTLRDLEVLACQADGREAGSLLWLLNRTATPGGYRTLREWVTRPLLQRDAILARQEAVTALA---FDPPRALEPLLATLKRGGCGGGGAVGGGNLDASIASLHHRNIHPRRLHTLLTVAAALA 304
            ++V  L    IC LGPL  +LR F L RV +  +     S+A   + L+A TLR+LE+L  Q DGR  GSLLW+L+ T T  G R LR+WV++PL   +++L R +AV  +      P  ++  LL+ L              +LD  I  ++HR    +  + + +  A L+
Sbjct:   20 SSVASLESPVICCLGPLIQYLREFNLERVLRSESSFQHLSSASGGMTLNAATLRNLEILNNQTDGRVKGSLLWVLDHTRTRFGRRMLRKWVSQPLTDTESVLRRLDAVQEILESNCSPLNSVRSLLSHLP-------------DLDRGICGIYHRKSSTQEFYIICSSLARLS 179          
BLAST of mRNA_P-wetherbeei_contig16660.1.1 vs. uniprot
Match: A0A8C6M718_NOTFU (MutS homolog 3 (E. coli) n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6M718_NOTFU)

HSP 1 Score: 90.1 bits (222), Expect = 2.600e-16
Identity = 57/137 (41.61%), Postives = 76/137 (55.47%), Query Frame = 0
Query:  137 TTVLDLPRRCICALGPLFGHLRRFRLARVFQRPTLTPFASAAY--VALDAVTLRDLEVLACQADGREAGSLLWLLNRTATPGGYRTLREWVTRPLLQRDAILARQEAVT------ALAFDPPRALEPLLATLKRGGC 265
            ++V  L    +C LGPL  +L+ F L RV +  +     S     V L+A TLR+LE+L  Q DGR  GSLLW+L+ T T  G R +R+WV+RPL    +I  RQEAV       +L  +  RAL   L  L+RG C
Sbjct:  348 SSVASLESPVVCCLGPLIQYLQEFNLERVLRNESSFQRLSCESEGVTLNATTLRNLEILTNQTDGRVKGSLLWVLDHTRTAFGRRLMRKWVSRPLTDLHSISQRQEAVQEIMESDSLTLNSVRALLSHLPDLERGIC 484          
BLAST of mRNA_P-wetherbeei_contig16660.1.1 vs. uniprot
Match: H3DD48_TETNG (MutS homolog 3 (E. coli) n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3DD48_TETNG)

HSP 1 Score: 90.1 bits (222), Expect = 2.700e-16
Identity = 59/173 (34.10%), Postives = 90/173 (52.02%), Query Frame = 0
Query:  137 TTVLDLPRRCICALGPLFGHLRRFRLARVFQRPTLTPFASAAY--VALDAVTLRDLEVLACQADGREAGSLLWLLNRTATPGGYRTLREWVTRPLLQRDAILARQEAVTALA---FDPPRALEPLLATLKRGGCGGGGAVGGGNLDASIASLHHRNIHPRRLHTLLTVAAALA 304
            ++V  L    IC LGPL  +LR F L RV +  +     S+A   + L+A TLR+LE+L  Q DGR  GSLLW+L+ T T  G R LR+WV++PL   +++L R +AV  +      P  ++  LL+ L              +LD  I  ++HR    +  + + +  A L+
Sbjct:  266 SSVASLESPVICCLGPLIQYLREFNLERVLRSESSFQHLSSASGGMTLNAATLRNLEILNNQTDGRVKGSLLWVLDHTRTRFGRRMLRKWVSQPLTDTESVLRRLDAVQEILESNCSPLNSVRSLLSHLP-------------DLDRGICGIYHRKSSTQEFYIICSSLARLS 425          
BLAST of mRNA_P-wetherbeei_contig16660.1.1 vs. uniprot
Match: A0A1A8DFW2_9TELE (MutS homolog 3 (Fragment) n=1 Tax=Nothobranchius kadleci TaxID=1051664 RepID=A0A1A8DFW2_9TELE)

HSP 1 Score: 89.4 bits (220), Expect = 4.790e-16
Identity = 56/137 (40.88%), Postives = 76/137 (55.47%), Query Frame = 0
Query:  137 TTVLDLPRRCICALGPLFGHLRRFRLARVFQRPTLTPFASAAY--VALDAVTLRDLEVLACQADGREAGSLLWLLNRTATPGGYRTLREWVTRPLLQRDAILARQEAVT------ALAFDPPRALEPLLATLKRGGC 265
            ++V  +    +C LGPL  +L+ F L RV +  +     S     V L+A TLR+LE+L  Q DGR  GSLLW+L+ T T  G R +R+WV+RPL    +I  RQEAV       +L  +  RAL   L  L+RG C
Sbjct:  190 SSVASMESPVVCCLGPLIQYLQEFNLERVLRNESSFQRLSCESEGVTLNATTLRNLEILTNQTDGRVKGSLLWVLDHTRTAFGRRLMRKWVSRPLTDLHSISQRQEAVQEIMESDSLTLNSVRALLSHLPDLERGIC 326          
BLAST of mRNA_P-wetherbeei_contig16660.1.1 vs. uniprot
Match: A0A1A8CZT0_9TELE (DNA mismatch repair protein n=18 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8CZT0_9TELE)

HSP 1 Score: 89.4 bits (220), Expect = 5.220e-16
Identity = 56/137 (40.88%), Postives = 76/137 (55.47%), Query Frame = 0
Query:  137 TTVLDLPRRCICALGPLFGHLRRFRLARVFQRPTLTPFASAAY--VALDAVTLRDLEVLACQADGREAGSLLWLLNRTATPGGYRTLREWVTRPLLQRDAILARQEAVT------ALAFDPPRALEPLLATLKRGGC 265
            ++V  +    +C LGPL  +L+ F L RV +  +     S     V L+A TLR+LE+L  Q DGR  GSLLW+L+ T T  G R +R+WV+RPL    +I  RQEAV       +L  +  RAL   L  L+RG C
Sbjct:  459 SSVASMESPVVCCLGPLIQYLQEFNLERVLRNESSFQRLSCESEGVTLNATTLRNLEILTNQTDGRVKGSLLWVLDHTRTAFGRRLMRKWVSRPLTDLHSISQRQEAVQEIMESDSLTLNSVRALLSHLPDLERGIC 595          
BLAST of mRNA_P-wetherbeei_contig16660.1.1 vs. uniprot
Match: A0A6H5K2F4_9PHAE (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2F4_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 8.770e-16
Identity = 54/109 (49.54%), Postives = 63/109 (57.80%), Query Frame = 0
Query:  192 VLACQADGREAGSLLWLLNRTATPGGYRTLREWVTRPLLQRDAILARQEAVTALAFDPPRALE---PLLATLKRGGCGGGGAVGGGNLDASIASLHHRNIHPRRLHTLL 297
            VL CQADGREAGSL  +L+RT T  G R L  WV +PLL  + I ARQ+AV  L  DPP  +E   P L  LK             +LD + ASLHHR I P RL +LL
Sbjct:    2 VLQCQADGREAGSLFSILDRTQTAFGRRVLAGWVRQPLLSPEDITARQDAVEELVADPPSVMERLRPALRDLK-------------DLDPATASLHHRRIQPSRLLSLL 97          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16660.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4D9D7G3_9STRA7.030e-2239.18Uncharacterized protein n=3 Tax=Monodopsidaceae Ta... [more]
D7FYL3_ECTSI3.150e-1931.25MutS protein homolog 3 n=1 Tax=Ectocarpus siliculo... [more]
A0A7S4PJ16_GUITH4.300e-1837.50Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A3B3SYK6_9TELE2.130e-1635.09DNA mismatch repair protein n=3 Tax=Paramormyrops ... [more]
Q4RUX4_TETNG2.340e-1634.10(spotted green pufferfish) hypothetical protein (F... [more]
A0A8C6M718_NOTFU2.600e-1641.61MutS homolog 3 (E. coli) n=1 Tax=Nothobranchius fu... [more]
H3DD48_TETNG2.700e-1634.10MutS homolog 3 (E. coli) n=1 Tax=Tetraodon nigrovi... [more]
A0A1A8DFW2_9TELE4.790e-1640.88MutS homolog 3 (Fragment) n=1 Tax=Nothobranchius k... [more]
A0A1A8CZT0_9TELE5.220e-1640.88DNA mismatch repair protein n=18 Tax=Nothobranchiu... [more]
A0A6H5K2F4_9PHAE8.770e-1649.54DNA_MISMATCH_REPAIR_2 domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007696DNA mismatch repair protein MutS, corePFAMPF05192MutS_IIIcoord: 186..300
e-value: 7.6E-19
score: 68.7
NoneNo IPR availableGENE3D1.10.1420.10coord: 182..304
e-value: 1.9E-25
score: 92.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..98
NoneNo IPR availablePANTHERPTHR11361:SF122DNA MISMATCH REPAIR PROTEIN MSH3coord: 16..293
IPR036678MutS, connector domain superfamilyGENE3D3.30.420.110MutS, connector domaincoord: 11..177
e-value: 4.8E-9
score: 38.4
IPR045076DNA mismatch repair MutS familyPANTHERPTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERcoord: 16..293
IPR036187DNA mismatch repair protein MutS, core domain superfamilySUPERFAMILY48334DNA repair protein MutS, domain IIIcoord: 183..303

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16660contigP-wetherbeei_contig16660:2..1113 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16660.1.1mRNA_P-wetherbeei_contig16660.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16660 2..1113 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16660.1.1 ID=prot_P-wetherbeei_contig16660.1.1|Name=mRNA_P-wetherbeei_contig16660.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=313bp
LPLPAAAAAAAGGGGLSRASERLLERYRETAVDASGRPRVVRTDRVPTEA
FDFDEAYAELAEYCAGDANGGDGGDSGDGGGSSSGGNDGDGAGGGDGGNN
KSTAGAGAAGVTAAAAKAGSAAGSGAMVNTLGPVAATTVLDLPRRCICAL
GPLFGHLRRFRLARVFQRPTLTPFASAAYVALDAVTLRDLEVLACQADGR
EAGSLLWLLNRTATPGGYRTLREWVTRPLLQRDAILARQEAVTALAFDPP
RALEPLLATLKRGGCGGGGAVGGGNLDASIASLHHRNIHPRRLHTLLTVA
AALAAALPPPDAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007696DNA_mismatch_repair_MutS_core
IPR036678MutS_con_dom_sf
IPR045076MutS_family
IPR036187DNA_mismatch_repair_MutS_sf