mRNA_P-wetherbeei_contig16653.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16653.1.1 vs. uniprot
Match: A0A6H5KLY7_9PHAE (JAB_MPN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLY7_9PHAE) HSP 1 Score: 160 bits (404), Expect = 5.600e-47 Identity = 84/158 (53.16%), Postives = 107/158 (67.72%), Query Frame = 1
Query: 1 DTMEVDGGPDERKATEHGDDASSKGRRSKGDAERQILLHPLAIISISDHYTRVSVGGSHLPASSRIFGLLFGVQEGLDVSIYDAVEVGYDD-DKGRIVVNAVAVEKQKELLTAVYPTYELLGWYSVGSEATEADVDVQKQMTRHNESPIFLLLNPRPA 471
DTMEVD G +E+K E A++ + G I+LHPL +I+ISDH+TRVS GG A R+ GLLFG Q G DVSIYDA+EV + +N VEKQK+L TAVYP YE+LGWY+VG+E TE D+ +Q+QMT+ N SP+FLL+NP PA
Sbjct: 3 DTMEVDAGVEEKKGEEQNVPATAAS--APGKKGNNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGRDVSIYDAMEVACTAVGANGLELNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSSPLFLLMNPSPA 158
BLAST of mRNA_P-wetherbeei_contig16653.1.1 vs. uniprot
Match: D8LBH4_ECTSI (COP9 signalosome complex subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH4_ECTSI) HSP 1 Score: 158 bits (400), Expect = 7.310e-45 Identity = 84/158 (53.16%), Postives = 106/158 (67.09%), Query Frame = 1
Query: 1 DTMEVDGGPDERKATEHGDDASSKGRRSKGDAERQILLHPLAIISISDHYTRVSVGGSHLPASSRIFGLLFGVQEGLDVSIYDAVEVGYDD-DKGRIVVNAVAVEKQKELLTAVYPTYELLGWYSVGSEATEADVDVQKQMTRHNESPIFLLLNPRPA 471
DTMEVD G +E+K E A++ + G I+LHPL +I+ISDH+TRVS GG A R+ GLLFG Q G DVSIYDA+EV + +N VEKQK L TAVYP YE+LGWY+VG+E TE D+ +Q+QMT+ N SP+FLL+NP PA
Sbjct: 3 DTMEVDAGVEEKKGEEQKVPATAAS--APGKKGNNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGRDVSIYDAMEVACTAVGANGLELNEALVEKQKNLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSSPLFLLMNPSPA 158
BLAST of mRNA_P-wetherbeei_contig16653.1.1 vs. uniprot
Match: A0A835YT38_9STRA (JAB_MPN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT38_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.480e-40 Identity = 71/130 (54.62%), Postives = 93/130 (71.54%), Query Frame = 1
Query: 79 RSKGDAERQILLHPLAIISISDHYTRVSVGGSHLPASSRIFGLLFGVQEGLDVSIYDAVEVGYDDDKGRIVVNAVAVEKQKELLTAVYPTYELLGWYSVGSEATEADVDVQKQMTRHNESPIFLLLNPRP 468
+S GD + I LHPLAII+ISDHYTRVS GG P ++I G+LFG + G ++ IYDA E+GYD G IV++ +V KQ EL AVYPTY++LGWYSVG E +D+ +Q+QM H +PIF+LL+P P
Sbjct: 19 KSAGDGQLSIHLHPLAIITISDHYTRVSTGGGVPPRDAKILGVLFGERSGAEIGIYDASEIGYDVVGGEIVLSQASVAKQVELYEAVYPTYKVLGWYSVGLEPCPSDIKLQQQMKTHCANPIFVLLDPEP 148
BLAST of mRNA_P-wetherbeei_contig16653.1.1 vs. uniprot
Match: A0A7S2B7N9_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B7N9_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.080e-35 Identity = 68/126 (53.97%), Postives = 89/126 (70.63%), Query Frame = 1
Query: 94 AERQILLHPLAIISISDHYTRVSVGGSHLPASSRIFGLLFGVQEGLDVSIYDAVEVGYD-DDKGRIVVNAVAVEKQKELLTAVYPTYELLGWYSVGSEATEADVDVQKQMTRHNESPIFLLLNPRP 468
+ER+I LHPLAII+ISDH+T + G S P S++ GLL+G Q+GL+VSI DA E+ Y D G V+ A V QK+L T VY YELLGWYSVG +A D+ V ++MT++NESP FLL++P P
Sbjct: 22 SERKIFLHPLAIITISDHFTCIESGASVKPRGSKVLGLLWGKQQGLEVSIMDAQELHYTLGDDGVPVITAEKVNSQKDLYTEVYKNYELLGWYSVGIDADGKDMAVHREMTKYNESPFFLLMHPSP 147
BLAST of mRNA_P-wetherbeei_contig16653.1.1 vs. uniprot
Match: A0A7S2S2E8_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2E8_9STRA) HSP 1 Score: 129 bits (323), Expect = 3.310e-33 Identity = 64/137 (46.72%), Postives = 91/137 (66.42%), Query Frame = 1
Query: 61 ASSKGRRSKGDAERQILLHPLAIISISDHYTRVSVGGSHLPASSRIFGLLFGVQEGLDVSIYDAVEVGYD-DDKGRIVVNAVAVEKQKELLTAVYPTYELLGWYSVGSEATEADVDVQKQMTRHNESPIFLLLNPRP 468
+S G ++ R+I LHPLAI+++SDH T + G S P S++ G+L+G Q+GL VSI DAVE+ Y+ D +G V++ AV +QK L VY +E+LGWYSVG E T D +Q++ T++NESP FLL+ P P
Sbjct: 40 SSEPGTGGDPESNRKISLHPLAIVAVSDHCTGIQTGASTKPPGSKVLGILWGKQQGLQVSITDAVELAYELDAQGMPVIDPEAVNQQKSLYMEVYKGHEMLGWYSVGEEVTPVDGLIQQEFTKYNESPFFLLVQPVP 176
BLAST of mRNA_P-wetherbeei_contig16653.1.1 vs. uniprot
Match: A0A7S2BCI8_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCI8_9STRA) HSP 1 Score: 128 bits (321), Expect = 4.370e-33 Identity = 62/126 (49.21%), Postives = 85/126 (67.46%), Query Frame = 1
Query: 94 AERQILLHPLAIISISDHYTRVSVGGSHLPASSRIFGLLFGVQEGLDVSIYDAVEVGYD-DDKGRIVVNAVAVEKQKELLTAVYPTYELLGWYSVGSEATEADVDVQKQMTRHNESPIFLLLNPRP 468
+E ++ LHPLAII +SDHYT + GGS S++ GLL+G Q+GL+VSI DA+E+GY D G V+ A V K+L + +LLGWYSVG E E D+ + ++MT++NESP FLL+NP P
Sbjct: 29 SENKVFLHPLAIIGMSDHYTTIEAGGSLAKPGSKVLGLLWGRQQGLEVSIMDAMELGYSLDANGVPVIEAEKVNGMKDLYLENFKDRDLLGWYSVGLEVVEMDMAIHREMTKYNESPFFLLMNPNP 154
BLAST of mRNA_P-wetherbeei_contig16653.1.1 vs. uniprot
Match: W7TEK2_9STRA (COP9 signalosome complex subunit 6 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEK2_9STRA) HSP 1 Score: 125 bits (315), Expect = 1.060e-31 Identity = 63/122 (51.64%), Postives = 83/122 (68.03%), Query Frame = 1
Query: 100 RQILLHPLAIISISDHYTRVSVGGSHLPASSRIFGLLFGVQEGLDVSIYDAVEVGYD-DDKGRIVVNAVAVEKQKELLTAVYPTYELLGWYSVGSEATEADVDVQKQMTRHNESPIFLLLNP 462
R + LHPLA+++I DH TRV VGGS LP +SRI G+LFGVQ GL VSI DA E+ Y+ + G + + A V ++KEL AV E++GWYSVG D+++ + MT NESP FLLL+P
Sbjct: 54 RHVALHPLALVTICDHCTRVKVGGSLLPVTSRILGILFGVQNGLQVSITDAFELQYEITENGSVKIPAGYVNEKKELFGAVNQGAEVMGWYSVGEHVLPGDLEIHRAMTEWNESPFFLLLSP 175
BLAST of mRNA_P-wetherbeei_contig16653.1.1 vs. uniprot
Match: A0A7S4A6I1_9STRA (COP9 signalosome complex subunit 6 (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6I1_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.280e-29 Identity = 60/137 (43.80%), Postives = 90/137 (65.69%), Query Frame = 1
Query: 61 ASSKGRRSKGDAE-RQILLHPLAIISISDHYTRVSVGGSHLPASSRIFGLLFGVQEGLDVSIYDAVEVGYDDDKGRIVVNAVAVEKQKELLTAVYPTYELLGWYSVGSEATEADVDVQKQMTRHNESPIFLLLNPRP 468
A+ KGR + ++ R + LHPLAI+ +SDH+TRVSVGGS A S + GLLFG+Q GL+V + DA+EV + V+A +E+ K L T VY +L+GWY+V T + + ++ ++NESP+FLL++P+P
Sbjct: 29 ATKKGRMAAAESTARTVALHPLAIVGVSDHFTRVSVGGSRQGAGSPVVGLLFGMQRGLEVDVVDAIEVHLTE---ATKVDAQFLEQSKALYTEVYEDRDLVGWYAVAPAPTANHLALHEEFVKYNESPLFLLMDPQP 162
BLAST of mRNA_P-wetherbeei_contig16653.1.1 vs. uniprot
Match: A0A8K1C296_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C296_PYTOL) HSP 1 Score: 115 bits (288), Expect = 4.140e-28 Identity = 55/133 (41.35%), Postives = 85/133 (63.91%), Query Frame = 1
Query: 88 GDAERQILLHPLAIISISDHYTRVSVG------GSHLPASSRIFGLLFGVQEGLDVSIYDAVEVGYDDDKGRIVVNAVAVEKQKELLTAVYPTYELLGWYSVGSEATEADVDVQKQMTRHNESPIFLLLNPRP 468
G AERQI +HPL +++I+DHYTR G ++ G LFG+Q GLDV++YD+ E+ YD KG + ++ + + E V+P +ELLGWY+VGS+A ++D+ + + + NESP+F+LL+P P
Sbjct: 31 GGAERQIQVHPLVVMNIADHYTRQKRNFQYEHPGQAEATMPQVIGGLFGIQNGLDVAVYDSFEMKYDVVKGEVQIDKEFLTSRIEQFAQVFPGFELLGWYTVGSKAQQSDLAIHRAVMEFNESPLFMLLDPTP 163
BLAST of mRNA_P-wetherbeei_contig16653.1.1 vs. uniprot
Match: A0A2D4BSB4_PYTIN (COP9 signalosome complex subunit 6 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSB4_PYTIN) HSP 1 Score: 114 bits (286), Expect = 7.190e-28 Identity = 54/143 (37.76%), Postives = 89/143 (62.24%), Query Frame = 1
Query: 61 ASSKGRRSKGDAERQILLHPLAIISISDHYTRVSVGGSH------LPASSRIFGLLFGVQEGLDVSIYDAVEVGYD-DDKGRIVVNAVAVEKQKELLTAVYPTYELLGWYSVGSEATEADVDVQKQMTRHNESPIFLLLNPRP 468
A + + G ER + +HPL +++I+DHYTR H L A ++ G LFGVQ GLDV+++D+ E+ YD G +V++ + + + + V+P +ELLGWY+VGS+A ++D+ + + + NESP+FLL++P P
Sbjct: 15 ADANENAASGGGERHVQIHPLVVMNIADHYTRQKRNFQHENKKAALSALPQVIGALFGVQNGLDVAVFDSFEIKYDLGSNGDVVIDKEFLTSRIQQFSQVFPGFELLGWYTVGSKAKQSDLTIHRSIMEFNESPLFLLMDPTP 157 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16653.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16653.1.1 >prot_P-wetherbeei_contig16653.1.1 ID=prot_P-wetherbeei_contig16653.1.1|Name=mRNA_P-wetherbeei_contig16653.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=155bp MEVDGGPDERKATEHGDDASSKGRRSKGDAERQILLHPLAIISISDHYTRback to top mRNA from alignment at P-wetherbeei_contig16653:345..1364+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16653.1.1 ID=mRNA_P-wetherbeei_contig16653.1.1|Name=mRNA_P-wetherbeei_contig16653.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1020bp|location=Sequence derived from alignment at P-wetherbeei_contig16653:345..1364+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16653:345..1364+ >mRNA_P-wetherbeei_contig16653.1.1 ID=mRNA_P-wetherbeei_contig16653.1.1|Name=mRNA_P-wetherbeei_contig16653.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig16653:345..1364+ (Phaeothamnion wetherbeei SAG_119_79)back to top |