mRNA_P-wetherbeei_contig1665.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1665.1.1
Unique NamemRNA_P-wetherbeei_contig1665.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A7S4QG60_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4QG60_9DINO)

HSP 1 Score: 196 bits (497), Expect = 1.590e-50
Identity = 115/296 (38.85%), Postives = 154/296 (52.03%), Query Frame = 2
Query: 1316 CAICLEDHVA-ADLLA--GLCGGGQCLGRFCKPCLAGYCESVVQRSRYSLPPIKCPSCAGRIATASWRALVPPPIFDEYRANAHALLTIRCSGCHMPQKLFDATPPLRDPVARAAAIASLRGDFGPAATRDLLLAWRKFERGARAADDVIDAVVTGLWVCRPLEQPQPDLAGAPTTLEAEDERWEKWG------GIVVGAVLPLVRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQARELEGSGVQFCPGCNVATVKSEACNHMVCVCGEDWTWVEE 2176
            C+IC E+  + A+L    GLC    C G FC+PCL+ Y    V+ S+Y++P I+CPSC G + T SW A V P + D  + NA  LL +RC  C +P  L  A  P  D   R+  +A        +   DL   W ++  G                     E+    LA    TL  +DE  E  G         +  +L L+ D  +RAVLQLA+LRR+P  R+  C+     CFKCKV   H GV+C EVQ R+++   +QFCPGC VATVKSE CN M+C+CGE+WTW  E
Sbjct:  216 CSICREEPTSGAELFLPDGLCRRRSCSGAFCRPCLSRYYTKAVEASQYAVPFIRCPSCRGFVRTNSWAACVEPDVVDAMKENAKHLLNLRCIECDVPGTLLVA--PEEDEDCRSRLLAEAFEGMKASDCEDLCRWWVRYSAGE--------------------EEASVGLALLARTLSQDDEMQEADGVPPLALQSCIQCLLGLIEDTAKRAVLQLAFLRRWPKTRSACCQAAH--CFKCKVGSHHEGVSCDEVQRRQMQDDALQFCPGCGVATVKSEGCNSMICICGEEWTWEGE 487          
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A812X862_9DINO (TCTN1 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812X862_9DINO)

HSP 1 Score: 184 bits (466), Expect = 1.280e-46
Identity = 111/291 (38.14%), Postives = 158/291 (54.30%), Query Frame = 2
Query: 1304 ETARCAICLEDHVAADLLAGLCGGGQCLGRFCKPCLAGYCESVVQRSRYSLPPIKCPSCAGRIATASWRALVPPPIFDEYRANAHALLTIRCSGCHMPQKL-FDATPP-LRDPVARAAAIASLRGDFGPAATRDLLLAWRKFERGARAADDVIDAVVTGLWVCRPLEQPQPDLAGAPTTLEAEDERWEKWGGIVVGAVLPLVRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQARELE-GSGVQFCPGCNVATVKSEACNHMVCVCGEDWTW 2167
            ++  C IC E+       A LC    C G FC  CLA Y E+++Q + +++P ++CP C G +  + WR  V      +++ NA  LL++RC  C  P  L F  TP   R+ +AR  A  S   D  P    +L  +W ++ERG  +A  ++D ++T  W   P    Q D        +A D+ W+++      A   L+ D   RAVLQL+ LRR+P  +T    C +  CFKCKV   H G +C E+Q ++ E   GVQFCP C VAT+KSE CNHM+C+CGEDWTW
Sbjct:  200 QSTTCMICFENTECVRSAAQLCVDRGCEGWFCTCCLAQYFENIIQETPFAVPTLRCPGCKGFVPPSCWRKYVKAETLLKWQGNAENLLSLRCGACDEPGSLLFPGTPSDSRECLARE-AFGSQAQD--PTEAAELEQSWCQYERGEMSAGSLLDVLLT-TW--HPGYHDQIDQNDG----KAPDKFWDRFQ-----AAANLIEDAGLRAVLQLSVLRRFP--KTATLCCNEPHCFKCKVTTHHEGTSCEEMQEQQSEMEDGVQFCPSCGVATMKSEGCNHMICLCGEDWTW 473          
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A812SLR6_9DINO (TCTN1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812SLR6_9DINO)

HSP 1 Score: 176 bits (447), Expect = 3.480e-44
Identity = 102/287 (35.54%), Postives = 154/287 (53.66%), Query Frame = 2
Query: 1316 CAICLEDHVAADLLAGLCGGGQCLGRFCKPCLAGYCESVVQRSRYSLPPIKCPSCAGRIATASWRALVPPPIFDEYRANAHALLTIRCSGCHMPQKLFDATPPLRDPVARAAAIASLRGDFGPAATRDLLLAWRKFERGARAADDVIDAVVTGLWVCRPLEQPQPDLAGAPTTLEAEDERWEKWGGIVVGAVLPLVRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQAR---ELEGSGVQFCPGCNVATVKSEACNHMVCVCGEDWTW 2167
            C+ICLED         LC    C G FC+ CL  Y E++++ + +++P ++CPSC G +  + W+A V      ++++NA  LL++RC  C  P  L    P   +  +R   + +  G   P A  +L   W +FERG ++A  + + V+ G+W      +   D A      +A D+ W     +   A   L+ D   RAVLQLA L+ +P   T  C   +  CF+C++   H  ++C EVQ +   +LE  GVQFCP C VAT+K+E CNHM+C+CGEDWTW
Sbjct:  190 CSICLEDAACVRSADELCVDRGCQGWFCRHCLGLYFETIIRETPFAVPTLRCPSCKGFVPPSCWQARVKEETVAKWQSNAENLLSLRCGSCDEPGSLLFPGPESSE--SRECLVRTAFGTQEPEAAAELEQKWHEFERGQQSAATLFE-VLLGMWH----PEYSHDTADGG---KAPDDFW-----VHFSAAAKLIEDAGLRAVLQLAVLKVFPKTETRCCH--EPHCFRCRIATHHEDMSCEEVQQQMSDDLE-DGVQFCPSCGVATMKTEGCNHMICLCGEDWTW 458          
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A1Q9DPR5_SYMMI (Tectonic-1 n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DPR5_SYMMI)

HSP 1 Score: 179 bits (454), Expect = 8.930e-43
Identity = 105/291 (36.08%), Postives = 155/291 (53.26%), Query Frame = 2
Query: 1301 VETARCAICLEDHVAADLLAGLCGGGQCLGRFCKPCLAGYCESVVQRSRYSLPPIKCPSCAGRIATASWRALVPPP-IFDEYRANAHALLTIRCSGCHMPQKLFDATPPLRDPVARAAAIASLRGDFGPAATRDLLLAWRKFERGARAADDVIDAVVTGLWVCRPLEQPQPDLAGAPTTLEAEDERWEKWGGIVVGAVLPLVRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQARELE-GSGVQFCPGCNVATVKSEACNHMVCVCGEDWTW 2167
            V++  C IC E+         LC    C G FC  CLA Y E+++Q + +++P ++CP C G +  + W+  V      +++  NA  LL++RC  C  P  L    P ++   +R        G   P A  +L  +W ++ERG  +A  ++D V+  +W   P  + Q D  G      A  + W+++      A   L+ D   RAVLQL+ L+R+P  +T    C +  CFKCKV   H G++C EV A++ E   GVQFCP C VAT+KSE CNHM+C+CGEDWTW
Sbjct:  710 VQSTSCMICFENTECVRSAGQLCVDRGCEGWFCSCCLAQYFENIIQETPFAVPTLRCPGCKGFVPPSCWQEHVAKAETVEKWHQNAANLLSLRCGACDEPGSLL--LPGVKADDSREGVAREAFGTQDPTAAAELEQSWCQYERGEMSAASLLD-VLLSVW--HPGYEDQADGNGF-----APGKFWDRFS-----AAANLIEDAGLRAVLQLSVLKRFP--KTATLCCNEPHCFKCKVTTHHEGMSCEEVLAQQSEVEDGVQFCPSCGVATMKSEGCNHMICLCGEDWTW 983          
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A812KER8_9DINO (TCTN1 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812KER8_9DINO)

HSP 1 Score: 171 bits (432), Expect = 8.980e-40
Identity = 100/286 (34.97%), Postives = 152/286 (53.15%), Query Frame = 2
Query: 1301 VETARCAICLEDHVAADLLAGLCGGGQCLGRFCKPCLAGYCESVVQRSRYSLPPIKCPSCAGRIATASWRALVPPPIFDEYRANAHALLTIRCSGCHMPQKLFDATPPLRDPVARAAAIASLRGDFGPAATRDLLLAWRKFERGARAADDVIDAVVTGLWVCRPLEQPQPDLAGAPTTLEAEDERWEKWGGIVVGAVLPLVRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQARELE-GSGVQFCPGCNVATVKSEACNHMVCVCGE 2155
            V +  C IC E+       A LC    C G FC  CLA Y E+++Q + +++P ++CP C G +  + W+  V     ++++ NA  LL++RC GC  P  L    P ++   +R        G   P A  +L  +W  +ERG  +A  ++D +++  W   P  + + D  G      A  + W+++      A   L+ D   RAVLQL+ L+R+P  +T    C +  CFKCKV   H G++C EVQ ++ +   GVQFCP C VAT+KSE CNHM+C+CGE
Sbjct:  683 VHSTSCMICFENTECVRSAAQLCVDRGCEGWFCTCCLAQYFENIIQETPFAVPTLRCPGCKGFVPPSCWQEHVTAETVEKWQGNAANLLSLRCGGCDEPGSLL--LPGVKAGDSREGVAREAFGAQDPTAAAELEQSWCLYERGEMSAASLLDVLLSA-W--HPGYEDEADRNGF-----APSKFWDRFQ-----AAANLIEDAGLRAVLQLSVLKRFP--KTATLCCNEPHCFKCKVTTHHEGMSCEEVQEQQSDMEDGVQFCPSCGVATMKSEGCNHMICLCGE 951          
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A7S0ZSN9_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZSN9_NOCSC)

HSP 1 Score: 166 bits (420), Expect = 1.290e-38
Identity = 105/286 (36.71%), Postives = 147/286 (51.40%), Query Frame = 2
Query: 1316 CAICLEDHVAADLLAGLCGGGQCLGRFCKPCLAGYCESVVQRSRYSLPPIKCPSCAGRIATASWRALVPPPIFDEYRANAHALLTIRCSGCHMPQKLFDATPPLRDPVARAAAIASLRGDFGPAATRDLLLAWRKFERGARAADDVIDAVVTGLWVCRPLEQPQPDLAGAPTTLEAEDERWEKWGGIVVGAVLPLVRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQARELEGSGVQFCPGCNVATVKSEACNHMVCVCGEDWTWVE 2173
            C+IC E+ V    +A LCG   C  RFC  C   +  +  Q + Y++P +KCP C GR+ TA WR  V   +  +Y +N  ALL  RC  C     L+ A     +  +R  A  +L  +    A  D L  W  F  G R+A++++D++     V    ++ +  +AGA   L           G V+  +  L+ D ERR   QLA+ RRYP + T PC C    CFKCK+   H G +C + Q  E++   VQFCP C V TVKSE C+H+VCVCG +W W E
Sbjct:  199 CSICFEEGVD---VAHLCGRATCRKRFCTECSGRHAATRFQDALYTMPLLKCPGCMGRVPTAFWRKWVKDEVVAKYVSNGSALLNFRCPDCDGTGSLYCADA---EETSRNEARCAL-AELADTAALDTL--WPGFWTGERSAEELVDSI---FGVLDQTQEVEDAVAGAAPELL----------GQVMEHLPTLITDPERRGCFQLAFFRRYPKILT-PC-CSVSFCFKCKIGDWHDGESCEDRQRAEMD-INVQFCPECGVPTVKSEGCDHIVCVCGANWYWRE 459          
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A813LKB7_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LKB7_POLGL)

HSP 1 Score: 147 bits (372), Expect = 1.600e-32
Identity = 107/337 (31.75%), Postives = 142/337 (42.14%), Query Frame = 2
Query: 1310 ARCAICLEDHVAADLLAGLCGGGQCLGRFCKPCLAGYCESVVQRSRYSLPPIKCPSCAGRIATASWRALVPPPIFDEYRANAHALLTIRCSGCHMPQKLF-----------------DATPPLRDPVARAAAIAS-------------------------LRGDFG------PAATRDLLLAWRKFERGARAADDVIDAVVTGLWVCRPLEQPQPDLAGAPTTLEAEDERWEKWGGIVVGAVLPL-VRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQARELEGSGVQFCPGCNVATVKSEACNHMVCVCGEDWTWVE 2173
            A C +C E H A   +   C  G+     C  C+  Y  + V  + Y++P I+CP C GR++TA+W   V P I  +Y  NA ALL +RC  C      F                  +   L    +RAAA+ S                            D         AA   L+ AWR+F     +AD+ + A +   W         P   G P +      R             PL + D ERR  +QLAWLRRYP +RT  C      CFKCKV G H  ++C E Q +E  G   QFCP C V T+ S+ CNH+ CVCG +WTW +
Sbjct:   30 AECQVCFE-HSALPRICAACPDGR---GCCSKCIRTYFTTAVNDALYAMPMIRCPLCRGRVSTAAWAPFVGPEIQAKYLGNAFALLALRCPDCDETASFFVQPTGGSSPESHTSCSFSSNSVLARARSRAAALRSQLEREELWCDLLTARESTARRQRRTAEQDHNILEARTRAAASTLVEAWRRFRSSEASADEFV-AKLHCAW--------PPGSCGLPRSGLCRAARRRA----------PLCIEDPERRLAMQLAWLRRYPKVRTTCCRAS--VCFKCKVRGWHRNLSCEERQRQET-GRDAQFCPNCQVPTIWSDGCNHIRCVCGTEWTWED 340          
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A813GAU2_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GAU2_POLGL)

HSP 1 Score: 147 bits (372), Expect = 1.940e-32
Identity = 107/337 (31.75%), Postives = 142/337 (42.14%), Query Frame = 2
Query: 1310 ARCAICLEDHVAADLLAGLCGGGQCLGRFCKPCLAGYCESVVQRSRYSLPPIKCPSCAGRIATASWRALVPPPIFDEYRANAHALLTIRCSGCHMPQKLF-----------------DATPPLRDPVARAAAIAS-------------------------LRGDFG------PAATRDLLLAWRKFERGARAADDVIDAVVTGLWVCRPLEQPQPDLAGAPTTLEAEDERWEKWGGIVVGAVLPL-VRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQARELEGSGVQFCPGCNVATVKSEACNHMVCVCGEDWTWVE 2173
            A C +C E H A   +   C  G+     C  C+  Y  + V  + Y++P I+CP C GR++TA+W   V P I  +Y  NA ALL +RC  C      F                  +   L    +RAAA+ S                            D         AA   L+ AWR+F     +AD+ + A +   W         P   G P +      R             PL + D ERR  +QLAWLRRYP +RT  C      CFKCKV G H  ++C E Q +E  G   QFCP C V T+ S+ CNH+ CVCG +WTW +
Sbjct:  733 AECQVCFE-HSALPRICAACPDGR---GCCSKCIRTYFTTAVNDALYAMPMIRCPLCRGRVSTAAWAPFVGPEIQAKYLGNAFALLALRCPDCDETASFFVQPTGGSSPESHTSCSFSSNSVLARARSRAAALRSQLEREELWCDLLTARESTARRQRRTAEQDHNILEARTRAAASTLVEAWRRFRSSEASADEFV-AKLHCAW--------PPGSCGLPRSGLCRAARRRA----------PLCIEDPERRLAMQLAWLRRYPKVRTTCCRAS--VCFKCKVRGWHRNLSCEERQRQET-GRDAQFCPNCQVPTIWSDGCNHIRCVCGTEWTWED 1043          
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A7S2IY00_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2IY00_9DINO)

HSP 1 Score: 129 bits (324), Expect = 1.610e-27
Identity = 102/305 (33.44%), Postives = 142/305 (46.56%), Query Frame = 2
Query: 1316 CAICLEDHVAADLLAGLCGGGQCLGRFCKPCLAGYCESVVQRSRYS----LPPIKCPSCAGRIATASWRALVPPPIFDEYRANAHALLTIRCSGCHMPQKLFDATPPLRDPVARAAAIASLRGDFGPAATRDLLLAWRKFER--GARAADDVIDAVVTGLWVCRPLEQPQPDLAGAPTTLEA-EDERWEKWGGIVVGAVLPLVRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQARELEGSGVQFCPGCNVATVKSEACNHMVCVCGEDWTWVEE*EKRKLQGSRG 2209
            C++C E   A       CG  +C  R C+PC   + + +  RS +S    +P I+CPSC G +AT   + +  P +       A + L+I C G      LF   PP     A  A  A L  D G  A   +   W  +    G+   D++++ +V+        E+ Q  L+ AP   E        K      G +L  VRD+ERRA LQL + RR+P +RT PC CG    F CK    H   +C   +++EL   G QFCP C V T ++  C HM CVCG  W W E  E+R L+  RG
Sbjct:   10 CSVCCEQEEALHS----CGSMRCRWRACRPC---WSKCLDDRSGFSYGLRVPRIRCPSCRGPLATEMLQEIA-PDLMQRQLECARSALSITCCG---EVSLFQEEPP----AAPGAVEALLPADMGAQARETIREGWLDWHDSYGSEDPDELLNLLVSAFDELE-FERGQSRLSTAPQRSEGLPPPGLSKL--FASGGLLSAVRDIERRATLQLRFRRRFPLIRT-PC-CGAEYIFVCKAHEWHDRASCRAGRSKELCSRG-QFCPECGVPTERNGGCTHMTCVCGAHWYW-ESWEERLLKDPRG 292          
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Match: A0A8J1Z393_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1Z393_9DINO)

HSP 1 Score: 115 bits (288), Expect = 2.690e-23
Identity = 92/339 (27.14%), Postives = 133/339 (39.23%), Query Frame = 2
Query: 1376 GQCLGRFCKPCLAGYCESVVQRSRYSLPPIKCPSCAGRIATAS---WRALVPPPIFDEYRANAHALLTIRCSGCHMPQKLFDAT------------------PPLRDPVARAAAIASLRGDFGPAATR-------------------------------------------DLLLAWRKFERGARAADDVIDAVVTGLW--VCRPLEQPQPDLAGAPTTLEAEDERWEKWGGIVVGAVLPL------VRDLERRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQARELEGSGVQFCPGCNVATVKSEACNHMVCVCGEDWTWVEE 2176
            G C G FC+ CLA +     + + Y LP IKCP+C GR+  AS   W       + +    NA  L+ +RC  C   + L++                    P + +       +A      G A+TR                                           DL+  W  F  G     D +D +   +   V +  E+ Q  L           +  ++   + V   L        ++  ER+AV QLA  R+YP  + Y   CG   CFKCKV   H G+TC E+Q REL+ +  QFCP C + T+K++ CN M+CVCG  W W  E
Sbjct:  177 GHCDGAFCENCLADFIRERFETATYMLPLIKCPACFGRVRGASLELWYKEAQQRLVE----NAETLMMMRCIECDESRTLYEGNDLVESSDDYLLDMLDWCLPEIEEEEDAGENMAQDEEVLGDASTRSRRATDNVPPDEGNTNQEEEQPLPKLVVTKQESAVQIREKLKQDLISTWIAFSNGLITPSDFLDEIENAILAAVHKGGERGQEALGR---------DLMQRMDALTVPRYLTSLQLVERIKCFERKAVTQLAIFRKYP--KIYTLCCGADHCFKCKVGHWHQGMTCDEMQQRELD-TEAQFCPECGIPTIKTDGCNEMICVCGAYWHWEGE 499          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1665.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A7S4QG60_9DINO1.590e-5038.85Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A812X862_9DINO1.280e-4638.14TCTN1 protein n=1 Tax=Symbiodinium sp. CCMP2592 Ta... [more]
A0A812SLR6_9DINO3.480e-4435.54TCTN1 protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A1Q9DPR5_SYMMI8.930e-4336.08Tectonic-1 n=3 Tax=Symbiodinium TaxID=2949 RepID=A... [more]
A0A812KER8_9DINO8.980e-4034.97TCTN1 protein n=1 Tax=Symbiodinium sp. CCMP2456 Ta... [more]
A0A7S0ZSN9_NOCSC1.290e-3836.71Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A813LKB7_POLGL1.600e-3231.75Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A813GAU2_POLGL1.940e-3231.75Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S2IY00_9DINO1.610e-2733.44Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A8J1Z393_9DINO2.690e-2327.14Hypothetical protein n=1 Tax=Amoebophrya sp. A25 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1665contigP-wetherbeei_contig1665:2..2886 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog112098.XP_008610036.1
Model size2545
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue3.59e-17
EggNOG OGs2EGD3@1|root,2SAJF@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-05_006520.1
Cds size1764
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186093.0656624-UTR-P-wetherbeei_contig1665:1..3671683186093.0656624-UTR-P-wetherbeei_contig1665:1..367Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1665 2..367 -
1683186093.0985465-UTR-P-wetherbeei_contig1665:2471..28861683186093.0985465-UTR-P-wetherbeei_contig1665:2471..2886Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1665 2472..2886 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186093.0783777-CDS-P-wetherbeei_contig1665:367..14991683186093.0783777-CDS-P-wetherbeei_contig1665:367..1499Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1665 368..1499 -
1683186093.0889115-CDS-P-wetherbeei_contig1665:1839..24711683186093.0889115-CDS-P-wetherbeei_contig1665:1839..2471Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1665 1840..2471 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1665.1.1prot_P-wetherbeei_contig1665.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1665 368..2471 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1665.1.1

>prot_P-wetherbeei_contig1665.1.1 ID=prot_P-wetherbeei_contig1665.1.1|Name=mRNA_P-wetherbeei_contig1665.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=588bp
MELPEAVVVAARSGDNQGVSLYLQSGGAVDAVAVSSGRSLLHMAAFNVSL
ELARAILAFRPDLALQDHRGLTALGTVEMLQAFVSGGGGGGGAGSLPARL
AALHALLTDAAANQAASHGMLLPLTAAAATLTAATAAAPVAAGEPAAVAP
AAAAGPPVAVLLVPSNRGRSEPVATAANPGIPMQRSSSCQPDLYQRGLDV
LRGRTTAGLQLFTDVALLRMTSEEASIPEAEAHLYIEREPLAPDAAATGD
NGGVQETKRPSAAEGDAAALAAAAAAADFGADAPSVETMMTAAAAVETAR
CAICLEDHVAADLLAGLCGGGQCLGRFCKPCLAGYCESVVQRSRYSLPPI
KCPSCAGRIATASWRALVPPPIFDEYRANAHALLTIRCSGCHMPQKLFDA
TPPLRDPVARAAAIASLRGDFGPAATRDLLLAWRKFERGARAADDVIDAV
VTGLWVCRPLEQPQPDLAGAPTTLEAEDERWEKWGGIVVGAVLPLVRDLE
RRAVLQLAWLRRYPFLRTYPCECGQMTCFKCKVEGCHPGVTCAEVQAREL
EGSGVQFCPGCNVATVKSEACNHMVCVCGEDWTWVEE*
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mRNA from alignment at P-wetherbeei_contig1665:2..2886-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1665.1.1 ID=mRNA_P-wetherbeei_contig1665.1.1|Name=mRNA_P-wetherbeei_contig1665.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2885bp|location=Sequence derived from alignment at P-wetherbeei_contig1665:2..2886- (Phaeothamnion wetherbeei SAG_119_79)
TACCAACTTAGCAAGTCTCGCCCTTATCCTTGCCTTTCTCCGCAATCTCG AGGGCGAATTGACGAGGAAAATAGCGTGCACAGGATAGGTATCAAACTTT AAGTTGTGATTCTGCCGCTCTGTTATCCGCTCATATGCAGTCCTGTTGGG TTTCACAAGGTTCTCTCGCTTACCGGGATTGTACATGCACCGGAGTTCCT CCTCCCCGAAATTCTTTAATTCCTCGCCTGACATTCCCCTTCTCAGCTCG TGTTGAGCCGCAGCACATTTTCTCGTGCGGTCTTATACTGGAAAATGAGT AGGAGTTGTCGTCCTCACCAACGGTGCTGCTACTCTCCTTCACTTCCTCT TCCGTACCAGTCTATTCCCGTCCAACTCCCATTCTTTTTCCTTGGCCGCT GCGTCATAAAGAAACATGGAGCTTCCAGAAGCGGTTGTGGTAGCGGCGCG GAGCGGAGACAACCAAGGCGTATCCCTCTACCTGCAAAGTGGCGGCGCCG TTGACGCTGTCGCCGTCTCGTCCGGTCGCTCTCTCCTTCATATGGCGGCA TTCAACGTCAGCCTTGAGCTGGCGCGAGCTATTCTGGCGTTTAGGCCGGA CCTGGCTCTCCAAGACCACCGCGGCCTGACTGCCCTCGGAACCGTCGAAA TGTTACAGGCGTTCGTCAGCGGTGGCGGCGGCGGGGGCGGCGCGGGCTCA TTGCCGGCGCGCCTCGCCGCCCTGCACGCTCTCCTGACCGACGCCGCGGC AAATCAGGCGGCGTCGCATGGAATGCTTTTACCCCTGACAGCGGCGGCGG CGACGCTGACGGCGGCGACGGCGGCGGCACCGGTGGCAGCAGGGGAGCCG GCAGCAGTGGCTCCGGCAGCGGCAGCAGGGCCGCCGGTGGCAGTTTTGCT GGTGCCGAGCAACCGCGGGCGGTCGGAACCCGTTGCCACGGCAGCTAATC CTGGCATCCCGATGCAGCGGTCGTCGTCATGCCAACCCGATTTGTATCAG CGTGGTTTGGACGTGCTACGGGGCCGAACGACCGCCGGCCTTCAGCTGTG CGTTTCTCATTTGCTGTTGTTTCTCTTCGCGAATCCTCTCCTGTCTCCCG TTCTGCTTTAAAGCGTGTGTTTGCTTCGTTCTTGGGATGAGGTTTTGATC GAAAGTTTTGGTGGACGACGCTTGAGAAACAAAGGGGTTCCAGCATTGTG GCGTTAATAGCTGTTTTCCCGTTTAGCTGACTGCTATAGCAGCGGCCAAC AGCAGCGGCCAGCAGCAGCAGGGAGCAGGAGCACCGGCTGGCAGCAGCAG GTGCAATCTCTTCGCAAGTAATGCCATCGCCTGCTTCATGTTTCCCTCTT TGCTGTTCTCATCTTGTCCTCCTGGCATTTTTCGCAGATTTACTGACGTC GCGCTCTTGCGGATGACATCAGAGGAGGCATCGATCCCGGAGGCCGAGGC GCACCTGTACATAGAGCGGGAGCCGCTTGCCCCCGATGCTGCCGCAACCG GCGATAACGGCGGCGTCCAGGAGACCAAGAGGCCTTCCGCTGCGGAAGGC GACGCGGCGGCTCTGGCAGCGGCGGCGGCGGCGGCCGATTTCGGTGCCGA CGCTCCATCGGTGGAGACGATGATGACGGCAGCGGCGGCTGTAGAAACGG CGCGCTGCGCCATCTGCCTGGAGGACCACGTGGCTGCCGACTTGCTAGCG GGGCTGTGCGGCGGCGGTCAATGCCTGGGCCGCTTCTGCAAGCCGTGCCT CGCCGGCTACTGCGAATCGGTCGTCCAGCGCTCGCGCTACTCGCTGCCGC CCATCAAGTGCCCGTCCTGCGCCGGCCGCATCGCGACCGCCAGTTGGAGG GCGCTCGTGCCGCCGCCCATCTTCGATGAGTACCGCGCCAACGCCCACGC GCTGCTGACGATCCGCTGCAGCGGCTGCCACATGCCGCAGAAGCTCTTTG ACGCCACGCCGCCGCTCCGGGACCCGGTGGCGCGGGCGGCGGCCATCGCG TCGCTCCGGGGGGATTTCGGACCCGCGGCGACGCGTGACCTGCTGCTGGC GTGGCGGAAGTTTGAACGCGGCGCACGTGCCGCTGACGATGTGATTGACG CCGTTGTGACGGGGCTTTGGGTGTGCCGCCCGCTGGAGCAGCCGCAGCCC GACCTGGCCGGCGCGCCAACGACCCTCGAGGCGGAGGATGAGCGCTGGGA GAAGTGGGGTGGCATCGTTGTCGGCGCTGTGCTGCCGCTGGTGCGCGACC TGGAGCGGCGGGCCGTCCTCCAGCTGGCGTGGCTGCGGCGGTACCCGTTC CTGCGCACGTACCCGTGCGAGTGCGGCCAGATGACCTGTTTTAAATGCAA AGTCGAAGGCTGCCACCCGGGGGTCACGTGCGCGGAGGTGCAGGCGCGGG AACTCGAGGGCTCGGGAGTGCAGTTCTGCCCCGGGTGCAATGTGGCGACG GTGAAGAGCGAAGCTTGCAATCACATGGTGTGCGTTTGTGGCGAGGATTG GACGTGGGTGGAGGAGTGAGAGAAAAGAAAGCTGCAGGGGTCGAGAGGAG GCGCGACCGGCCCGTGGGGGAGGCGGCATGGCCGGCTGCGGGGGAGACAG CGCAGCCTGTCGCAGAAGAGGCGGTGCGGCTGCGATTGTGGCAGGGTCTA AGGTCTTGGAGGCTGACGGCTGCCGCTGGCGGAGATTAGACCTTGCAACT TTGGCGGACCTTCTATTAGGGGGCTGAGACGAGGGCTCGTAATTAAGTAA CACAGTGCGGTCCAGGGGCATCGCCGGTTCTCGGTTCTCTGTTTCGCAAC GTGTTCGCGGGGAGCTCTAGGGCTGCTTCCGGGTGGGGAAAGGAAGTAGT GCGGAGCCGGCAGCAGTGCGGCGGCGGCGGCGGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1665:2..2886-

>mRNA_P-wetherbeei_contig1665.1.1 ID=mRNA_P-wetherbeei_contig1665.1.1|Name=mRNA_P-wetherbeei_contig1665.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1764bp|location=Sequence derived from alignment at P-wetherbeei_contig1665:2..2886- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGCTTCCAGAAGCGGTTGTGGTAGCGGCGCGGAGCGGAGACAACCA
AGGCGTATCCCTCTACCTGCAAAGTGGCGGCGCCGTTGACGCTGTCGCCG
TCTCGTCCGGTCGCTCTCTCCTTCATATGGCGGCATTCAACGTCAGCCTT
GAGCTGGCGCGAGCTATTCTGGCGTTTAGGCCGGACCTGGCTCTCCAAGA
CCACCGCGGCCTGACTGCCCTCGGAACCGTCGAAATGTTACAGGCGTTCG
TCAGCGGTGGCGGCGGCGGGGGCGGCGCGGGCTCATTGCCGGCGCGCCTC
GCCGCCCTGCACGCTCTCCTGACCGACGCCGCGGCAAATCAGGCGGCGTC
GCATGGAATGCTTTTACCCCTGACAGCGGCGGCGGCGACGCTGACGGCGG
CGACGGCGGCGGCACCGGTGGCAGCAGGGGAGCCGGCAGCAGTGGCTCCG
GCAGCGGCAGCAGGGCCGCCGGTGGCAGTTTTGCTGGTGCCGAGCAACCG
CGGGCGGTCGGAACCCGTTGCCACGGCAGCTAATCCTGGCATCCCGATGC
AGCGGTCGTCGTCATGCCAACCCGATTTGTATCAGCGTGGTTTGGACGTG
CTACGGGGCCGAACGACCGCCGGCCTTCAGCTATTTACTGACGTCGCGCT
CTTGCGGATGACATCAGAGGAGGCATCGATCCCGGAGGCCGAGGCGCACC
TGTACATAGAGCGGGAGCCGCTTGCCCCCGATGCTGCCGCAACCGGCGAT
AACGGCGGCGTCCAGGAGACCAAGAGGCCTTCCGCTGCGGAAGGCGACGC
GGCGGCTCTGGCAGCGGCGGCGGCGGCGGCCGATTTCGGTGCCGACGCTC
CATCGGTGGAGACGATGATGACGGCAGCGGCGGCTGTAGAAACGGCGCGC
TGCGCCATCTGCCTGGAGGACCACGTGGCTGCCGACTTGCTAGCGGGGCT
GTGCGGCGGCGGTCAATGCCTGGGCCGCTTCTGCAAGCCGTGCCTCGCCG
GCTACTGCGAATCGGTCGTCCAGCGCTCGCGCTACTCGCTGCCGCCCATC
AAGTGCCCGTCCTGCGCCGGCCGCATCGCGACCGCCAGTTGGAGGGCGCT
CGTGCCGCCGCCCATCTTCGATGAGTACCGCGCCAACGCCCACGCGCTGC
TGACGATCCGCTGCAGCGGCTGCCACATGCCGCAGAAGCTCTTTGACGCC
ACGCCGCCGCTCCGGGACCCGGTGGCGCGGGCGGCGGCCATCGCGTCGCT
CCGGGGGGATTTCGGACCCGCGGCGACGCGTGACCTGCTGCTGGCGTGGC
GGAAGTTTGAACGCGGCGCACGTGCCGCTGACGATGTGATTGACGCCGTT
GTGACGGGGCTTTGGGTGTGCCGCCCGCTGGAGCAGCCGCAGCCCGACCT
GGCCGGCGCGCCAACGACCCTCGAGGCGGAGGATGAGCGCTGGGAGAAGT
GGGGTGGCATCGTTGTCGGCGCTGTGCTGCCGCTGGTGCGCGACCTGGAG
CGGCGGGCCGTCCTCCAGCTGGCGTGGCTGCGGCGGTACCCGTTCCTGCG
CACGTACCCGTGCGAGTGCGGCCAGATGACCTGTTTTAAATGCAAAGTCG
AAGGCTGCCACCCGGGGGTCACGTGCGCGGAGGTGCAGGCGCGGGAACTC
GAGGGCTCGGGAGTGCAGTTCTGCCCCGGGTGCAATGTGGCGACGGTGAA
GAGCGAAGCTTGCAATCACATGGTGTGCGTTTGTGGCGAGGATTGGACGT
GGGTGGAGGAGTGA
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