mRNA_P-wetherbeei_contig16626.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16626.1.1
Unique NamemRNA_P-wetherbeei_contig16626.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16626.1.1 vs. uniprot
Match: UPI0019A44C44 (NAD-dependent DNA ligase LigA n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=UPI0019A44C44)

HSP 1 Score: 698 bits (1801), Expect = 2.200e-249
Identity = 359/380 (94.47%), Postives = 371/380 (97.63%), Query Frame = 1
Query:    1 DGVVYKVNRLDWQARLGFVSRSPRWAIAHKFAAEKATTVLEGIDIQVGRTGALTPVARLKPVTVGGVVVSNATLHNEDEIARKDLRIGDTVMVQRAGDVIPQIVAVIMEKRPRGAAPYEFPKVCPACGSHAEREERDTGKTDVVRRCTGGLICPAQRVERLKHFASRNAFDIEGLGDKIIEEFYHDGLIQSPSDIFTLAARNERALKKLKDREGWGEASVKKLFDAIDQRRSIALDRFIFALGIRHVGETTARVLARAYGSAEHFLEQMIAAQP-DSEAWNELNALDGIGAVVAEAITQFFGEGHNIEVVDDLLKHVAPAPLAAVAASSPVSGKTVVFTGALEMMTREEAKSMAERLGAKVAGSVSKKTDLLVAGPGAGS 1137
            DGVVYKVNRLDWQARLGFVSRSPRWA+AHKFAAEKATTVLEGIDIQVGRTGALTPVARL+PVTVGGVVVSNATLHNEDEIARKDLRIGDTV VQRAGDVIPQIVAVI+EKRPRGA PYEFPKVCPACGSHAEREERDTGKTDVVRRCTGGLICPAQRVERLKHF+SRNAFDIEGLGDKIIEEFYHDGLIQSPSDIFTLAARNERALKKLKDREGWGEASVKKLF+AIDQRRSIALDRFIFALGIRHVGETTARVLARAYGSAEHF +QMIAA   D EAWNELNA+DGIGA+VAEAITQFFGEGHNIEVV++LLKHV P+ LAAVAASSPVSGKTVVFTGALE+MTREEAKSMAERLGAKVAGSVSKKTDLLVAGPGAGS
Sbjct:  208 DGVVYKVNRLDWQARLGFVSRSPRWALAHKFAAEKATTVLEGIDIQVGRTGALTPVARLRPVTVGGVVVSNATLHNEDEIARKDLRIGDTVTVQRAGDVIPQIVAVIVEKRPRGAKPYEFPKVCPACGSHAEREERDTGKTDVVRRCTGGLICPAQRVERLKHFSSRNAFDIEGLGDKIIEEFYHDGLIQSPSDIFTLAARNERALKKLKDREGWGEASVKKLFEAIDQRRSIALDRFIFALGIRHVGETTARVLARAYGSAEHFRDQMIAASHRDEEAWNELNAIDGIGAIVAEAITQFFGEGHNIEVVNELLKHVTPSALAAVAASSPVSGKTVVFTGALELMTREEAKSMAERLGAKVAGSVSKKTDLLVAGPGAGS 587          
BLAST of mRNA_P-wetherbeei_contig16626.1.1 vs. uniprot
Match: A0A2W2BJC0_9HYPH (DNA ligase n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=A0A2W2BJC0_9HYPH)

HSP 1 Score: 617 bits (1592), Expect = 6.400e-216
Identity = 317/393 (80.66%), Postives = 348/393 (88.55%), Query Frame = 1
Query:    1 DGVVYKVNRLDWQARLGFVSRSPRWAIAHKFAAEKATTVLEGIDIQVGRTGALTPVARLKPVTVGGVVVSNATLHNEDEIARKDLRIGDTVMVQRAGDVIPQIVAVIMEKRPRGAAPYEFPKVCPACGSHAEREERDTGKTDVVRRCTGGLICPAQRVERLKHFASRNAFDIEGLGDKIIEEFYHDGLIQSPSDIFTLAARNERALKKLKDREGWGEASVKKLFDAIDQRRSIALDRFIFALGIRHVGETTARVLARAYGSAEHFLEQMIAAQP-DSEAWNELNALDGIGAVVAEAITQFFGEGHNIEVVDDLLKHVAPAPLAAVAASSPVSGKTVVFTGALEMMTREEAKSMAERLGAKVAGSVSKKTDLLVAGPGAGSKLKEAEKHGVEVI 1176
            DGVVYKVNRLDWQ RLGFVSRSPRW +AHKF+AEKATTVLE IDIQVGRTGALTPVARLKPVTVGGVVV+NATLHNEDEIARKD+R GDTV+VQRAGDVIPQI+  + +KRPR A PYEFP+ CP C SHA REER +GK D VRRCTGGLIC AQRVERLKHFASRNAFDIEGLGDKIIEEFY DGLI  P D+FTL  R++  LK+LK+REGWGEASVKKLF AID+RR+I LDRFIFALGIRHVGETTAR LARAYG+AEHF EQM+AA   + EAW+ELNA+DGIG VVAEA+ QFFGE HN +VVD+LLKHV    L A + +SPV+GKTVVFTGALE MTREEAK+MAERLGAKV+GSVSKKTDLLVAGPGAGSKLK+AEKHGVEVI
Sbjct:  298 DGVVYKVNRLDWQQRLGFVSRSPRWGLAHKFSAEKATTVLEKIDIQVGRTGALTPVARLKPVTVGGVVVTNATLHNEDEIARKDIREGDTVIVQRAGDVIPQILGFVADKRPRDARPYEFPQQCPVCQSHAVREERASGKVDAVRRCTGGLICAAQRVERLKHFASRNAFDIEGLGDKIIEEFYADGLIAWPHDVFTLEERDKGQLKRLKNREGWGEASVKKLFAAIDERRTIGLDRFIFALGIRHVGETTARALARAYGTAEHFREQMVAAGGMEGEAWSELNAIDGIGEVVAEAVVQFFGEPHNRDVVDELLKHVTVTALEARSTTSPVAGKTVVFTGALERMTREEAKAMAERLGAKVSGSVSKKTDLLVAGPGAGSKLKDAEKHGVEVI 690          
BLAST of mRNA_P-wetherbeei_contig16626.1.1 vs. uniprot
Match: UPI0018C7DC22 (NAD-dependent DNA ligase LigA n=1 Tax=Aestuariivirga litoralis TaxID=2650924 RepID=UPI0018C7DC22)

HSP 1 Score: 592 bits (1526), Expect = 4.190e-206
Identity = 307/394 (77.92%), Postives = 344/394 (87.31%), Query Frame = 1
Query:    1 DGVVYKVNRLDWQARLGFVSRSPRWAIAHKFAAEKATTVLEGIDIQVGRTGALTPVARLKPVTVGGVVVSNATLHNEDEIARKDLRIGDTVMVQRAGDVIPQIVAVIMEKRPRGAAPYEFPKVCPACGSHAEREERDTGKTDVVRRCTGGLICPAQRVERLKHFASRNAFDIEGLGDKIIEEFYHDGLIQSPSDIFTLAARNERALKKLKDREGWGEASVKKLFDAIDQRRSIALDRFIFALGIRHVGETTARVLARAYGSAEHFLEQMIAA--QPDSEAWNELNALDGIGAVVAEAITQFFGEGHNIEVVDDLLKHVAPAPLAAVAASSPVSGKTVVFTGALEMMTREEAKSMAERLGAKVAGSVSKKTDLLVAGPGAGSKLKEAEKHGVEVI 1176
            DGVVYK+N L  Q RLGFVSRSPRWAIAHKF+A +ATTVLE IDIQVGRTGALTPVARLKPVTVGGVVVSNATLHNEDEIARKD+R+GD V++QRAGDVIPQIV V   +R +G  PYEFPKVCPACGSHAERE+R +GK D VRRCTGGLICPAQRVERLKHFASRNA+DIEGLGDKI+ EFY DGLI +P DIFTLAAR+ R++KKL  REGWG +SV  LF AI+ RR+IALDRFIFALGIRH+GETTARVLAR Y SAEH  EQM AA    +++A +ELNA+DGIG++VAEA+ +FFGE HN+E+ D LLK V P  L AVA SSPV+G+TVVFTGALE MTREEAK+MAERLGAKVAGSVSKKTDLLVAGPGAGSKLK+AEKHGV+VI
Sbjct:  286 DGVVYKLNDLGLQQRLGFVSRSPRWAIAHKFSAVQATTVLEAIDIQVGRTGALTPVARLKPVTVGGVVVSNATLHNEDEIARKDVRVGDIVIIQRAGDVIPQIVGVA--ERGQGTVPYEFPKVCPACGSHAEREDRGSGKADAVRRCTGGLICPAQRVERLKHFASRNAYDIEGLGDKIVHEFYEDGLIAAPQDIFTLAARDARSVKKLDQREGWGASSVANLFAAIEDRRTIALDRFIFALGIRHIGETTARVLARHYHSAEHLEEQMKAAALSEENDARHELNAIDGIGSIVAEAVIEFFGEPHNLEIYDALLKEVKPQALEAVATSSPVAGQTVVFTGALEKMTREEAKAMAERLGAKVAGSVSKKTDLLVAGPGAGSKLKDAEKHGVKVI 677          
BLAST of mRNA_P-wetherbeei_contig16626.1.1 vs. uniprot
Match: A0A849E5N8_9HYPH (DNA ligase (NAD(+)) n=1 Tax=Anderseniella sp. TaxID=1872568 RepID=A0A849E5N8_9HYPH)

HSP 1 Score: 568 bits (1464), Expect = 1.140e-200
Identity = 296/395 (74.94%), Postives = 334/395 (84.56%), Query Frame = 1
Query:    1 DGVVYKVNRLDWQARLGFVSRSPRWAIAHKFAAEKATTVLEGIDIQVGRTGALTPVARLKPVTVGGVVVSNATLHNEDEIARKDLRIGDTVMVQRAGDVIPQIVAVIMEKRPRGAAPYEFPKVCPACGSHAEREERD-TGKTDVVRRCTGGLICPAQRVERLKHFASRNAFDIEGLGDKIIEEFYHDGLIQSPSDIFTLAARNERALKKLKDREGWGEASVKKLFDAIDQRRSIALDRFIFALGIRHVGETTARVLARAYGSAEHFLEQMIAAQPD-SEAWNELNALDGIGAVVAEAITQFFGEGHNIEVVDDLL-KHVAPAPLAAVAASSPVSGKTVVFTGALEMMTREEAKSMAERLGAKVAGSVSKKTDLLVAGPGAGSKLKEAEKHGVEVI 1176
            DGVVYKVNRLDWQ RLGFVSRSPRWA+AHKFAAEKA T+LEGIDIQVGRTGALTPVARLKPVTVGGVVVSNATLHNEDEI RKD+RIGDTV +QRAGDVIPQ++  + +KRP  A  Y FP +CPACGSHA RE  + TGK DVV RCTGGLICPAQRVERLKHF SRNAFDIEG+GDK+I+EFY DGLIQSP DIFTL AR+ER+LKKLKDREGWG  S   LF AID+RR I LDRFI++LGIRHVGETT R LAR+YG+A+ FL+ M AAQ   SEA+ +L  +DGIG VVA A+ +FF E HN+ VV +L+ +H+   PL AV   SPVSG TVVFTGALE MTR+EAK+MAERLGAKVAGSVSKKT+L+VAGPGAGSKLK+A + GVEVI
Sbjct:   19 DGVVYKVNRLDWQERLGFVSRSPRWAVAHKFAAEKAITILEGIDIQVGRTGALTPVARLKPVTVGGVVVSNATLHNEDEIIRKDIRIGDTVTIQRAGDVIPQVLGHLPDKRPPEAVEYVFPAICPACGSHAVREINEKTGKMDVVHRCTGGLICPAQRVERLKHFVSRNAFDIEGMGDKVIQEFYDDGLIQSPQDIFTLEARDERSLKKLKDREGWGGTSAGNLFAAIDERRRIGLDRFIYSLGIRHVGETTGRTLARSYGTADQFLDAMTAAQDHASEAYADLVNIDGIGDVVARAVAEFFAEPHNLSVVKELVDEHLDIQPLEAVDTGSPVSGMTVVFTGALERMTRDEAKAMAERLGAKVAGSVSKKTNLVVAGPGAGSKLKKATELGVEVI 413          
BLAST of mRNA_P-wetherbeei_contig16626.1.1 vs. uniprot
Match: A0A7Y2FSE7_9HYPH (DNA ligase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7Y2FSE7_9HYPH)

HSP 1 Score: 567 bits (1462), Expect = 3.380e-196
Identity = 288/395 (72.91%), Postives = 336/395 (85.06%), Query Frame = 1
Query:    1 DGVVYKVNRLDWQARLGFVSRSPRWAIAHKFAAEKATTVLEGIDIQVGRTGALTPVARLKPVTVGGVVVSNATLHNEDEIARKDLRIGDTVMVQRAGDVIPQIVAVIMEKRPRGAAPYEFPKVCPACGSHAEREERD-TGKTDVVRRCTGGLICPAQRVERLKHFASRNAFDIEGLGDKIIEEFYHDGLIQSPSDIFTLAARNERALKKLKDREGWGEASVKKLFDAIDQRRSIALDRFIFALGIRHVGETTARVLARAYGSAEHFLEQMI--AAQPDSEAWNELNALDGIGAVVAEAITQFFGEGHNIEVVDDLLKHVAPAPLAAVAASSPVSGKTVVFTGALEMMTREEAKSMAERLGAKVAGSVSKKTDLLVAGPGAGSKLKEAEKHGVEVI 1176
            DGVVYKVNRLD+Q RLGF SR+PRWA+AHKFAAEKA T+LE I+IQVGRTGALTPVARLKPVTVGGVVVSNATLHNEDEI RK +RIGDTV+VQRAGDVIPQ+V  + +KRP  A P+ FPKVCPACGSHA R+  + TGK D VRRCTGGLICPAQRVERLKHF SRNAFDIEGLGDK+I EFYHDGLIQSP DIF+L  R++++LK+LKDREGWGE SV+ LF AID+RR+I LDRF++ALGIRHVGETT RVLAR+YG+ E     M+  AA  D EA+ +LN +DGIG  VA+A+ +FFGE HN++V D+L +H+    L AV   SPVSGKT+VFTGALE M+R+EAK+MAERLGAKV+GSVSKKTDL+VAGPGAGSKLK+A + G+EVI
Sbjct:  298 DGVVYKVNRLDYQDRLGFRSRTPRWAVAHKFAAEKAMTILEDIEIQVGRTGALTPVARLKPVTVGGVVVSNATLHNEDEIERKGIRIGDTVVVQRAGDVIPQVVEFVADKRPEDAEPFVFPKVCPACGSHAVRDVNEKTGKVDAVRRCTGGLICPAQRVERLKHFVSRNAFDIEGLGDKVIVEFYHDGLIQSPQDIFSLEVRDQKSLKRLKDREGWGETSVRNLFAAIDERRTIGLDRFLYALGIRHVGETTGRVLARSYGTLEALRFAMLEAAADRDGEAFADLNNIDGIGTTVADALAEFFGEPHNLKVFDELCEHLTVTALEAVDTGSPVSGKTIVFTGALERMSRDEAKAMAERLGAKVSGSVSKKTDLVVAGPGAGSKLKKAAELGIEVI 692          
BLAST of mRNA_P-wetherbeei_contig16626.1.1 vs. uniprot
Match: A0A6I3KNX1_9HYPH (DNA ligase n=1 Tax=Hyphomicrobium album TaxID=2665159 RepID=A0A6I3KNX1_9HYPH)

HSP 1 Score: 565 bits (1456), Expect = 3.330e-195
Identity = 293/395 (74.18%), Postives = 337/395 (85.32%), Query Frame = 1
Query:    1 DGVVYKVNRLDWQARLGFVSRSPRWAIAHKFAAEKATTVLEGIDIQVGRTGALTPVARLKPVTVGGVVVSNATLHNEDEIARKDLRIGDTVMVQRAGDVIPQIVAVIMEKRPRGAAPYEFPKVCPACGSHAERE-ERDTGKTDVVRRCTGGLICPAQRVERLKHFASRNAFDIEGLGDKIIEEFYHDGLIQSPSDIFTLAARNERALKKLKDREGWGEASVKKLFDAIDQRRSIALDRFIFALGIRHVGETTARVLARAYGSAEHFLEQMI--AAQPDSEAWNELNALDGIGAVVAEAITQFFGEGHNIEVVDDLLKHVAPAPLAAVAASSPVSGKTVVFTGALEMMTREEAKSMAERLGAKVAGSVSKKTDLLVAGPGAGSKLKEAEKHGVEVI 1176
            DGVVYKVNRLD Q RLGFVSRSPRWAIAHKF A +A TVL GIDIQVGRTGALTPVARL+PVTVGGVVV+NATLHNEDEIARKD+RIGDTV++QRAGDVIPQIV V+ +KRP+GA PY+FP +CPACGSHA RE +  TGK DVVRRCTGGLICPAQRVERLKHF SRNAFDIEGLG+K I+ FY DGLIQSP DIFTLAAR+ R++K+L++REGWG  S  KLF+AI  RR+IALDRFI+ALGIRHVGETTA++LAR YGS EHF + MI  AA  DSEA+ EL+ ++GIG VVAEAI  FFGE HN+ VVD+LL+ VAP PL AV ++S V+GKTVVFTG L ++TR EAK+ AERLGAKVAGSVSKKTD +VAG  AGSKL +A + GV ++
Sbjct:  301 DGVVYKVNRLDLQERLGFVSRSPRWAIAHKFPARQAMTVLNGIDIQVGRTGALTPVARLEPVTVGGVVVTNATLHNEDEIARKDVRIGDTVILQRAGDVIPQIVGVVADKRPKGAKPYKFPVLCPACGSHAVREVDEKTGKVDVVRRCTGGLICPAQRVERLKHFVSRNAFDIEGLGEKNIQAFYDDGLIQSPDDIFTLAARDARSVKRLEEREGWGPQSATKLFNAIAARRTIALDRFIYALGIRHVGETTAKLLARFYGSIEHFRQSMIDAAAGKDSEAFKELDNIEGIGEVVAEAIADFFGEPHNVRVVDELLREVAPQPLEAVDSTSAVAGKTVVFTGTLTLLTRGEAKAQAERLGAKVAGSVSKKTDYVVAGADAGSKLSKARELGVAIL 695          
BLAST of mRNA_P-wetherbeei_contig16626.1.1 vs. uniprot
Match: A0A848Y2D4_9HYPH (DNA ligase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A848Y2D4_9HYPH)

HSP 1 Score: 563 bits (1450), Expect = 2.220e-194
Identity = 292/393 (74.30%), Postives = 329/393 (83.72%), Query Frame = 1
Query:    1 DGVVYKVNRLDWQARLGFVSRSPRWAIAHKFAAEKATTVLEGIDIQVGRTGALTPVARLKPVTVGGVVVSNATLHNEDEIARKDLRIGDTVMVQRAGDVIPQIVAVIMEKRPRGAAPYEFPKVCPACGSHAEREER-DTGKTDVVRRCTGGLICPAQRVERLKHFASRNAFDIEGLGDKIIEEFYHDGLIQSPSDIFTLAARNERALKKLKDREGWGEASVKKLFDAIDQRRSIALDRFIFALGIRHVGETTARVLARAYGSAEHFLEQMIAAQP-DSEAWNELNALDGIGAVVAEAITQFFGEGHNIEVVDDLLKHVAPAPLAAVAASSPVSGKTVVFTGALEMMTREEAKSMAERLGAKVAGSVSKKTDLLVAGPGAGSKLKEAEKHGVEV 1173
            DGVVYKV+RLDWQ RLGFVSR+PRWA AHKF AEKATTVL  I+IQVGRTGALTPVA+L PVTVGGVVVSNATLHNEDEI RKD+RIGDTV +QRAGDVIPQ++  + E+RP  A P+ FP +CPACGSHA RE    TGK D VRRCTGGLICPAQ VERLKHF SRNA+DIEGLG K IE FY DGLIQ PSDIFTL  R+ER+LKKLKDREG+GE S + LFDAID+RR+++LDRFIFALG+RHVGETTAR+LAR YG+ E   E ++AA   +S+AW +L  +DGIG VVAEAI  FF E HN EV+  LL  V+P PL AVAA SPVSGKTVVFTG+LE MTR+EAK+MAERLGAKVAGSVSKKTDL+VAGPGAGSKLK+A   GVEV
Sbjct:  299 DGVVYKVDRLDWQRRLGFVSRAPRWATAHKFPAEKATTVLRDIEIQVGRTGALTPVAKLDPVTVGGVVVSNATLHNEDEIERKDVRIGDTVTIQRAGDVIPQVLGHVPERRPADATPFAFPDICPACGSHAVREHNAKTGKLDAVRRCTGGLICPAQAVERLKHFVSRNAYDIEGLGIKQIEAFYEDGLIQRPSDIFTLRQRDERSLKKLKDREGYGEISARNLFDAIDERRNVSLDRFIFALGMRHVGETTARLLARTYGTMEALNEALVAASDRESDAWADLVNIDGIGEVVAEAIVDFFAESHNQEVLQALLAEVSPEPLEAVAAQSPVSGKTVVFTGSLEQMTRDEAKAMAERLGAKVAGSVSKKTDLVVAGPGAGSKLKKATDLGVEV 691          
BLAST of mRNA_P-wetherbeei_contig16626.1.1 vs. uniprot
Match: UPI0019BC5A73 (NAD-dependent DNA ligase LigA n=1 Tax=Methyloceanibacter sp. TaxID=1965321 RepID=UPI0019BC5A73)

HSP 1 Score: 553 bits (1425), Expect = 2.040e-190
Identity = 289/395 (73.16%), Postives = 328/395 (83.04%), Query Frame = 1
Query:    1 DGVVYKVNRLDWQARLGFVSRSPRWAIAHKFAAEKATTVLEGIDIQVGRTGALTPVARLKPVTVGGVVVSNATLHNEDEIARKDLRIGDTVMVQRAGDVIPQIVAVIMEKRPRGAAPYEFPKVCPACGSHAERE-ERDTGKTDVVRRCTGGLICPAQRVERLKHFASRNAFDIEGLGDKIIEEFYHDGLIQSPSDIFTLAARNERALKKLKDREGWGEASVKKLFDAIDQRRSIALDRFIFALGIRHVGETTARVLARAYGSAEHFLEQMIAAQPD--SEAWNELNALDGIGAVVAEAITQFFGEGHNIEVVDDLLKHVAPAPLAAVAASSPVSGKTVVFTGALEMMTREEAKSMAERLGAKVAGSVSKKTDLLVAGPGAGSKLKEAEKHGVEVI 1176
            DG+VYK++RLD Q RLGFVSRSPR+AIAHKF AEKATT+L  IDIQVGRTGALTPVA+L PVTVGGVVV NATLHNEDEIARKD+RIGDTV+VQRAGDVIPQI+ ++ EKRP+GA  + FP +CPACGSHA RE   +TGK D VRRCTGGLICPAQRVERLKHF SRNAFDIEGLG+K I+ FY DGLIQSP DIFTLAAR++RA  KL +REGWGE S   LFDAI  RR++ LDRFI+ALGIRHVGE TAR+LAR YGSAE FL  M AA  D  SEA+ EL+ ++GIG  VA AI +FF E HN+ VVDDLLK V+PAPL A+  +SP++GKTVVFTG LE MTR EAK+ AERLGAKVAGSVSK TD +VAGPGAGSKLK A+  GV V+
Sbjct:  313 DGIVYKLDRLDLQQRLGFVSRSPRYAIAHKFPAEKATTILRDIDIQVGRTGALTPVAKLDPVTVGGVVVQNATLHNEDEIARKDVRIGDTVIVQRAGDVIPQILGMVQEKRPKGAKRFAFPTICPACGSHASREINPNTGKEDAVRRCTGGLICPAQRVERLKHFVSRNAFDIEGLGEKHIKSFYRDGLIQSPPDIFTLAARDKRASSKLAEREGWGETSAGNLFDAIGARRNVKLDRFIYALGIRHVGEITARLLARNYGSAEAFLAAMRAAGADRESEAFAELDNIEGIGPTVAAAIAEFFAEPHNVAVVDDLLKEVSPAPLEAIDHASPIAGKTVVFTGTLERMTRSEAKAKAERLGAKVAGSVSKNTDYVVAGPGAGSKLKNAKDLGVTVL 707          
BLAST of mRNA_P-wetherbeei_contig16626.1.1 vs. uniprot
Match: A0A1E3VYY3_9HYPH (DNA ligase n=1 Tax=Methyloceanibacter methanicus TaxID=1774968 RepID=A0A1E3VYY3_9HYPH)

HSP 1 Score: 551 bits (1421), Expect = 7.470e-190
Identity = 286/395 (72.41%), Postives = 325/395 (82.28%), Query Frame = 1
Query:    1 DGVVYKVNRLDWQARLGFVSRSPRWAIAHKFAAEKATTVLEGIDIQVGRTGALTPVARLKPVTVGGVVVSNATLHNEDEIARKDLRIGDTVMVQRAGDVIPQIVAVIMEKRPRGAAPYEFPKVCPACGSHAERE-ERDTGKTDVVRRCTGGLICPAQRVERLKHFASRNAFDIEGLGDKIIEEFYHDGLIQSPSDIFTLAARNERALKKLKDREGWGEASVKKLFDAIDQRRSIALDRFIFALGIRHVGETTARVLARAYGSAEHFLEQMIAAQPDSE--AWNELNALDGIGAVVAEAITQFFGEGHNIEVVDDLLKHVAPAPLAAVAASSPVSGKTVVFTGALEMMTREEAKSMAERLGAKVAGSVSKKTDLLVAGPGAGSKLKEAEKHGVEVI 1176
            DGVVYK++RLD Q RLGFVSRSPRWAIAHKF AEKA T+L  I+IQVGRTGALTPVA+L+PVTVGGVVV NATLHNEDEIARKD+RIGDTV++QRAGDVIPQI+  +++KRP+ A P+ FP VCPACGSHA RE   +TG+ D VRRCTGGLICPAQR ERLKHF SRNAFDIEGLG+K I+ FY +GLIQSP DIFTLAAR+ +A  KL +REGWGE SV+KLFDAI  RR++ LDRFI+ALGIRHVGE T R+LAR YGS EHFLE    A  D E  A+ EL  +DGIG   A AI  FFGE HN++VV DLLK V+P PLAAV   SPVSGKTVVFTG LE MTR EAK+ AERLGAKVAGSVSK TD +VAGPGAGSKLK A++ GV+V+
Sbjct:  310 DGVVYKLDRLDLQERLGFVSRSPRWAIAHKFPAEKAMTILRDIEIQVGRTGALTPVAKLEPVTVGGVVVQNATLHNEDEIARKDVRIGDTVLLQRAGDVIPQILGPVLDKRPKSAKPFVFPTVCPACGSHAVREINPNTGREDAVRRCTGGLICPAQRAERLKHFVSRNAFDIEGLGEKNIQSFYDEGLIQSPPDIFTLAARDAKAETKLAEREGWGETSVQKLFDAIAARRNVTLDRFIYALGIRHVGEITGRLLARNYGSIEHFLEATAEAAQDRESTAYTELENIDGIGPTAAAAIADFFGEPHNVQVVHDLLKEVSPKPLAAVDKGSPVSGKTVVFTGTLEHMTRAEAKAQAERLGAKVAGSVSKNTDYVVAGPGAGSKLKNAKELGVDVL 704          
BLAST of mRNA_P-wetherbeei_contig16626.1.1 vs. uniprot
Match: A0A117S6A0_9PROT (DNA ligase n=1 Tax=Alphaproteobacteria bacterium BRH_c36 TaxID=1734406 RepID=A0A117S6A0_9PROT)

HSP 1 Score: 551 bits (1419), Expect = 1.280e-189
Identity = 283/395 (71.65%), Postives = 330/395 (83.54%), Query Frame = 1
Query:    1 DGVVYKVNRLDWQARLGFVSRSPRWAIAHKFAAEKATTVLEGIDIQVGRTGALTPVARLKPVTVGGVVVSNATLHNEDEIARKDLRIGDTVMVQRAGDVIPQIVAVIMEKRPRGAAPYEFPKVCPACGSHAERE-ERDTGKTDVVRRCTGGLICPAQRVERLKHFASRNAFDIEGLGDKIIEEFYHDGLIQSPSDIFTLAARNERALKKLKDREGWGEASVKKLFDAIDQRRSIALDRFIFALGIRHVGETTARVLARAYGSAEHFLEQMIAAQP--DSEAWNELNALDGIGAVVAEAITQFFGEGHNIEVVDDLLKHVAPAPLAAVAASSPVSGKTVVFTGALEMMTREEAKSMAERLGAKVAGSVSKKTDLLVAGPGAGSKLKEAEKHGVEVI 1176
            DG+VYKV+RLD Q RLGFVSR+PRWAIAHKF AE+ATT+L+ I+IQVGRTGALTPVA+L+PVTVGGVVVSNATLHNEDEIARKD+R+GDTV+VQRAGDVIPQIV+V++E+RP  + P+ FP VCP CGSHA RE +  +G+TDVVRRCTGGLICPAQRVERLKHF SRNAFDI+GLGDK I+ FY DGLIQSP DIFTL  R+  A ++LKDREGWGE S KKLF AID RR I LDRFI++LGIRHVGETTA+VLAR+YG  E F   MIAA    +SEAW +LN +DGIG  VAEA+ +FF E HN+ VV+DLL  V P PL AVA+ SPV+GKTVVFTG+LE  +R EAK+ AERLGAKVAGSVSKKTD +VAG  AGSKL +A + G+ V+
Sbjct:  303 DGIVYKVDRLDLQERLGFVSRAPRWAIAHKFPAEQATTILKDIEIQVGRTGALTPVAKLEPVTVGGVVVSNATLHNEDEIARKDVRVGDTVIVQRAGDVIPQIVSVVLERRPENSEPFRFPVVCPVCGSHAVREADEKSGRTDVVRRCTGGLICPAQRVERLKHFVSRNAFDIDGLGDKGIQAFYDDGLIQSPPDIFTLEKRDAAAPERLKDREGWGEQSAKKLFAAIDARREIPLDRFIYSLGIRHVGETTAKVLARSYGDIETFKAAMIAAGEGEESEAWADLNNIDGIGKTVAEALVEFFAEPHNVGVVEDLLNEVTPTPLEAVASRSPVAGKTVVFTGSLEKFSRSEAKAKAERLGAKVAGSVSKKTDYVVAGADAGSKLTKARELGIAVL 697          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16626.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0019A44C442.200e-24994.47NAD-dependent DNA ligase LigA n=1 Tax=Hyphomicrobi... [more]
A0A2W2BJC0_9HYPH6.400e-21680.66DNA ligase n=1 Tax=Aestuariivirga litoralis TaxID=... [more]
UPI0018C7DC224.190e-20677.92NAD-dependent DNA ligase LigA n=1 Tax=Aestuariivir... [more]
A0A849E5N8_9HYPH1.140e-20074.94DNA ligase (NAD(+)) n=1 Tax=Anderseniella sp. TaxI... [more]
A0A7Y2FSE7_9HYPH3.380e-19672.91DNA ligase n=1 Tax=Hyphomicrobiales bacterium TaxI... [more]
A0A6I3KNX1_9HYPH3.330e-19574.18DNA ligase n=1 Tax=Hyphomicrobium album TaxID=2665... [more]
A0A848Y2D4_9HYPH2.220e-19474.30DNA ligase n=1 Tax=Hyphomicrobiales bacterium TaxI... [more]
UPI0019BC5A732.040e-19073.16NAD-dependent DNA ligase LigA n=1 Tax=Methyloceani... [more]
A0A1E3VYY3_9HYPH7.470e-19072.41DNA ligase n=1 Tax=Methyloceanibacter methanicus T... [more]
A0A117S6A0_9PROT1.280e-18971.65DNA ligase n=1 Tax=Alphaproteobacteria bacterium B... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16626contigP-wetherbeei_contig16626:73..1248 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1282876.BAOK01000001_gene1372
Preferred nameligA
PFAMsBRCT,DNA_ligase_OB,DNA_ligase_ZBD,DNA_ligase_aden,HHH_2
Model size1176
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00005
KEGG koko:K01972
KEGG ReactionR00382
KEGG Pathwayko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.34e-188
EggNOG OGsCOG0272@1|root,COG0272@2|Bacteria,1MV3R@1224|Proteobacteria,2TRHK@28211|Alphaproteobacteria,4BPM0@82117|unclassified Alphaproteobacteria
EC6.5.1.2
DescriptionDNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
Cds size1176
COG categoryL
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186092.583832-CDS-P-wetherbeei_contig16626:72..12481683186092.583832-CDS-P-wetherbeei_contig16626:72..1248Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16626 73..1248 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16626.1.1prot_P-wetherbeei_contig16626.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16626 73..1248 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16626.1.1

>prot_P-wetherbeei_contig16626.1.1 ID=prot_P-wetherbeei_contig16626.1.1|Name=mRNA_P-wetherbeei_contig16626.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=392bp
DGVVYKVNRLDWQARLGFVSRSPRWAIAHKFAAEKATTVLEGIDIQVGRT
GALTPVARLKPVTVGGVVVSNATLHNEDEIARKDLRIGDTVMVQRAGDVI
PQIVAVIMEKRPRGAAPYEFPKVCPACGSHAEREERDTGKTDVVRRCTGG
LICPAQRVERLKHFASRNAFDIEGLGDKIIEEFYHDGLIQSPSDIFTLAA
RNERALKKLKDREGWGEASVKKLFDAIDQRRSIALDRFIFALGIRHVGET
TARVLARAYGSAEHFLEQMIAAQPDSEAWNELNALDGIGAVVAEAITQFF
GEGHNIEVVDDLLKHVAPAPLAAVAASSPVSGKTVVFTGALEMMTREEAK
SMAERLGAKVAGSVSKKTDLLVAGPGAGSKLKEAEKHGVEVI
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mRNA from alignment at P-wetherbeei_contig16626:73..1248-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16626.1.1 ID=mRNA_P-wetherbeei_contig16626.1.1|Name=mRNA_P-wetherbeei_contig16626.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1176bp|location=Sequence derived from alignment at P-wetherbeei_contig16626:73..1248- (Phaeothamnion wetherbeei SAG_119_79)
GACGGGGTTGTCTACAAGGTGAACCGGCTGGACTGGCAGGCGCGGCTGGG TTTTGTCTCGCGCAGCCCGCGCTGGGCCATCGCCCACAAGTTCGCGGCGG AGAAGGCCACCACGGTTCTGGAAGGCATCGACATTCAGGTAGGCCGCACC GGGGCCTTGACGCCGGTGGCGCGGCTCAAGCCCGTAACGGTCGGCGGCGT TGTGGTGTCGAATGCCACGTTGCATAATGAGGATGAAATTGCCCGGAAGG ATTTGCGCATTGGTGACACGGTCATGGTGCAGCGGGCAGGCGATGTGATT CCGCAGATTGTTGCGGTGATCATGGAGAAGCGCCCGCGCGGTGCGGCTCC TTACGAATTTCCAAAAGTCTGCCCGGCTTGCGGCAGCCATGCGGAGCGTG AGGAACGCGACACGGGCAAGACCGATGTGGTGCGGCGCTGCACGGGCGGG CTCATCTGCCCGGCGCAGAGAGTTGAACGTCTCAAGCATTTTGCCTCGCG CAATGCCTTCGATATCGAGGGGCTGGGCGACAAGATCATCGAAGAATTCT ACCACGATGGCCTCATTCAATCGCCGTCGGATATTTTTACGCTTGCGGCG CGCAATGAACGCGCCCTGAAAAAACTGAAAGACCGCGAAGGCTGGGGCGA GGCCAGCGTCAAGAAACTGTTTGACGCTATTGACCAGCGCCGCAGCATCG CGCTTGACCGGTTTATTTTTGCCCTCGGCATTCGCCATGTCGGCGAGACC ACGGCGCGGGTTCTGGCGCGGGCCTATGGCTCGGCGGAGCATTTTCTCGA GCAGATGATTGCGGCGCAACCCGATTCAGAGGCCTGGAACGAACTTAATG CGCTTGATGGCATCGGGGCTGTGGTGGCCGAAGCGATCACGCAATTTTTT GGCGAGGGCCATAACATCGAGGTGGTCGATGACCTGCTGAAGCATGTGGC ACCAGCTCCGCTTGCCGCCGTTGCCGCGTCTTCGCCGGTCTCGGGAAAAA CGGTGGTGTTTACAGGGGCCCTTGAGATGATGACGCGCGAGGAAGCGAAA TCAATGGCGGAGCGGCTGGGGGCCAAGGTGGCGGGCTCAGTTTCCAAGAA AACCGATCTGCTCGTGGCAGGCCCGGGGGCAGGCTCAAAACTCAAGGAAG CCGAAAAACATGGAGTTGAGGTCATC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16626:73..1248-

>mRNA_P-wetherbeei_contig16626.1.1 ID=mRNA_P-wetherbeei_contig16626.1.1|Name=mRNA_P-wetherbeei_contig16626.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1176bp|location=Sequence derived from alignment at P-wetherbeei_contig16626:73..1248- (Phaeothamnion wetherbeei SAG_119_79)
GACGGGGTTGTCTACAAGGTGAACCGGCTGGACTGGCAGGCGCGGCTGGG
TTTTGTCTCGCGCAGCCCGCGCTGGGCCATCGCCCACAAGTTCGCGGCGG
AGAAGGCCACCACGGTTCTGGAAGGCATCGACATTCAGGTAGGCCGCACC
GGGGCCTTGACGCCGGTGGCGCGGCTCAAGCCCGTAACGGTCGGCGGCGT
TGTGGTGTCGAATGCCACGTTGCATAATGAGGATGAAATTGCCCGGAAGG
ATTTGCGCATTGGTGACACGGTCATGGTGCAGCGGGCAGGCGATGTGATT
CCGCAGATTGTTGCGGTGATCATGGAGAAGCGCCCGCGCGGTGCGGCTCC
TTACGAATTTCCAAAAGTCTGCCCGGCTTGCGGCAGCCATGCGGAGCGTG
AGGAACGCGACACGGGCAAGACCGATGTGGTGCGGCGCTGCACGGGCGGG
CTCATCTGCCCGGCGCAGAGAGTTGAACGTCTCAAGCATTTTGCCTCGCG
CAATGCCTTCGATATCGAGGGGCTGGGCGACAAGATCATCGAAGAATTCT
ACCACGATGGCCTCATTCAATCGCCGTCGGATATTTTTACGCTTGCGGCG
CGCAATGAACGCGCCCTGAAAAAACTGAAAGACCGCGAAGGCTGGGGCGA
GGCCAGCGTCAAGAAACTGTTTGACGCTATTGACCAGCGCCGCAGCATCG
CGCTTGACCGGTTTATTTTTGCCCTCGGCATTCGCCATGTCGGCGAGACC
ACGGCGCGGGTTCTGGCGCGGGCCTATGGCTCGGCGGAGCATTTTCTCGA
GCAGATGATTGCGGCGCAACCCGATTCAGAGGCCTGGAACGAACTTAATG
CGCTTGATGGCATCGGGGCTGTGGTGGCCGAAGCGATCACGCAATTTTTT
GGCGAGGGCCATAACATCGAGGTGGTCGATGACCTGCTGAAGCATGTGGC
ACCAGCTCCGCTTGCCGCCGTTGCCGCGTCTTCGCCGGTCTCGGGAAAAA
CGGTGGTGTTTACAGGGGCCCTTGAGATGATGACGCGCGAGGAAGCGAAA
TCAATGGCGGAGCGGCTGGGGGCCAAGGTGGCGGGCTCAGTTTCCAAGAA
AACCGATCTGCTCGTGGCAGGCCCGGGGGCAGGCTCAAAACTCAAGGAAG
CCGAAAAACATGGAGTTGAGGTCATC
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