mRNA_P-wetherbeei_contig166.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig166.2.1 vs. uniprot
Match: A0A6H5JG01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG01_9PHAE) HSP 1 Score: 119 bits (297), Expect = 1.440e-23 Identity = 74/192 (38.54%), Postives = 104/192 (54.17%), Query Frame = 3
Query: 63 RSICLTHQDTLLFEFPSTIAGPAAITLGDADNDGGIE--LVVGGLDGTLAVFKGWQEQPA--YVASGLGGIVAVGLGRLFLATGDAKAAPRQLVVIAAEGRCHIFNIIPDATVGLXXXXXXXXXXXXXXXXXXXXXXXVQVHPIFTLSCPCNVTACTVGDVLCGPEGGSGHPEFVVGTSDGHVHVLGLEFDE 626
R++C + Q T +FE ++G AA+ LGD DND E L VGG+DGTLAVFK P ++ASGLG + A+GLG+LFL GD +QL+ EG CHIFNI P +V+P++++ CP NVT+C + D+ G E V+GT +G VHVL ++F++
Sbjct: 12 RTVCQSRQQTTVFEGAPVVSGSAAVLLGDVDNDPQAERELAVGGVDGTLAVFKVGHPTPGPYFMASGLGTLSALGLGKLFLGYGD----DQQLIACTEEGVCHIFNIRP------------------ADLKWDPESDTGRVNPVWSVPCPKNVTSCCIADI-----DGDKMQEVVMGTREGGVHVLKIDFNQ 176
BLAST of mRNA_P-wetherbeei_contig166.2.1 vs. uniprot
Match: F0ZSI8_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZSI8_DICPU) HSP 1 Score: 71.2 bits (173), Expect = 7.140e-9 Identity = 41/107 (38.32%), Postives = 63/107 (58.88%), Query Frame = 3
Query: 51 SGDVRSICLTHQDTLLFEFPSTIAGPAAITLGDADNDGGIELVVGGLDGTLAVFKGWQEQPAYVASGLGGIVAVGLGRLFLATGDAKAAPRQLVVIAAEGRCHIFNI 371
+ +R I LT D ++ + I AI L D DNDG EL+VG L+G LA+FKG E+P ++SGLG I + G L A + + ++VI++EG C+I+++
Sbjct: 3 NNSIRHISLT--DRIVLSWKGNIFR-RAIALADVDNDGDNELIVGSLEGNLAIFKGMSEKPWKISSGLGSISCISCGDL------ANSGRKLIIVISSEGICNIYDL 100
BLAST of mRNA_P-wetherbeei_contig166.2.1 vs. uniprot
Match: A0A1X2IQS3_9FUNG (Uncharacterized protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IQS3_9FUNG) HSP 1 Score: 68.2 bits (165), Expect = 7.560e-8 Identity = 36/89 (40.45%), Postives = 48/89 (53.93%), Query Frame = 3
Query: 126 PAAITLGDADNDGGIELVVGGLDGTLAVFKGWQE--QPAYVASGLGGIVAVGLGRLFLATGDAKAAPRQLVVIAAEGRCHIFNIIPDAT 386
P A+ LGD DNDG +E V+G L+G LA+FKG P + LG I + +G + +VV+ AEG CHIF+I P T
Sbjct: 20 PHALELGDVDNDGDVEFVIGNLNGDLAIFKGECPIGSPTFTCQDLGTITCIAIGDV------RNVGKNSIVVVNAEGHCHIFDIPPTVT 102
BLAST of mRNA_P-wetherbeei_contig166.2.1 vs. uniprot
Match: Q55DE8_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q55DE8_DICDI) HSP 1 Score: 67.8 bits (164), Expect = 9.350e-8 Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 3
Query: 51 SGDVRSICLTHQDTLLFEFPSTIAGPAAITLGDADNDGGIELVVGGLDGTLAVFKGWQEQPAYVASGLGGIVAVGLGRLFLATGDAKAAPRQLVVIAAEGRCHIFNI 371
S +R I LT + L+ + I A++L D DNDG EL+VG L+G LA+FKG E+P VA LG I + +G L + +VVI++EG C+I++I
Sbjct: 6 SNSIRHISLTER--LVLSWKGNIFR-RALSLADVDNDGDNELIVGSLEGNLAIFKGISEKPWKVAHNLGSISCIAVGDL------GNCGRKLIVVISSEGVCNIYDI 103
BLAST of mRNA_P-wetherbeei_contig166.2.1 vs. uniprot
Match: A0A812C388_SEPPH (ITFG2 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812C388_SEPPH) HSP 1 Score: 65.9 bits (159), Expect = 1.880e-7 Identity = 54/174 (31.03%), Postives = 74/174 (42.53%), Query Frame = 3
Query: 132 AITLGDADNDGGIELVVGGLDGTLAVFKGWQEQPAYVASGLGGIVAVGLGRLFLATGDAKAAPRQLVVIAAEGRCHIFNIIPDATVGLXXXXXXXXXXXXXXXXXXXXXXXVQVHPIFTLSCPCNVTACTVGDVLCGPEGGSGHPEFVVGTSDGHVHVLGLE-----FDESPNY 638
A+ LGD DNDGG EL VG ++GTL+VFKG + P S LG I V +G + + LV + A+G C+IF++ ++ + P FT P N + DV G G E VVG SD V + E +ESP +
Sbjct: 22 ALALGDIDNDGGNELAVGNIEGTLSVFKGKEFSPWKKCSDLGMITCVKVGDI------CNSGKNFLVCLTAKGWCYIFDVKTESN--------------EPPVSENEDDSHTSLRPTFTEYLPANSKLMLLADV-----DGDGRIEVVVGYSDRTVRLFRWEDISELSEESPGH 170
BLAST of mRNA_P-wetherbeei_contig166.2.1 vs. uniprot
Match: A0A1B6DEV0_9HEMI (Uncharacterized protein n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6DEV0_9HEMI) HSP 1 Score: 65.1 bits (157), Expect = 3.270e-7 Identity = 44/105 (41.90%), Postives = 59/105 (56.19%), Query Frame = 3
Query: 60 VRSICLTHQDTLLFEFPSTIAGPAAITLGDADNDGGIELVVGGLDGTLAVFKG---WQEQPAYVASGLGGIVAVGLGRLFLATGDAKAAPRQLVVIAAEGRCHIF 365
+R +C + L FEF + AI LGD DNDG IELV+G ++G L ++KG WQ+ SGLG I AVG+G + +A LVVI +G CHI+
Sbjct: 1 MRVVCFVKR--LEFEFHGNVY-KNAIALGDVDNDGEIELVIGNMNGDLVIYKGKKCWQKL-----SGLGVITAVGIGDVMNCDSNA------LVVICGDGWCHIY 91
BLAST of mRNA_P-wetherbeei_contig166.2.1 vs. uniprot
Match: A0A163ISF2_ABSGL (Uncharacterized protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A163ISF2_ABSGL) HSP 1 Score: 65.5 bits (158), Expect = 5.050e-7 Identity = 36/84 (42.86%), Postives = 46/84 (54.76%), Query Frame = 3
Query: 126 PAAITLGDADNDGGIELVVGGLDGTLAVFKGWQE--QPAYVASGLGGIVAVGLGRLFLATGDAKAAPRQLVVIAAEGRCHIFNI 371
P A+ LGD DNDG IE V+G L+G +AVFKG P + LG I + +G + +VVI AEG CHIF+I
Sbjct: 20 PHALELGDVDNDGDIEFVIGNLNGEMAVFKGECPLGSPTFTCQDLGTITCIAIGDV------RNVGKNSIVVINAEGHCHIFDI 97
BLAST of mRNA_P-wetherbeei_contig166.2.1 vs. uniprot
Match: A0A087UQI9_STEMI (Integrin-alpha FG-GAP repeat-containing protein 2 (Fragment) n=2 Tax=Stegodyphus TaxID=175340 RepID=A0A087UQI9_STEMI) HSP 1 Score: 63.2 bits (152), Expect = 1.190e-6 Identity = 40/97 (41.24%), Postives = 50/97 (51.55%), Query Frame = 3
Query: 93 LLFEFPSTIAGPAAITLGDADNDGGIELVVGGLDGTLAVFKGWQEQPAYVASGLGGIVAVGLGRLFLATGDAKAAPRQLVVIAAEGRCHIFNIIPDA 383
L FEF ++ A++LGD DND ELVVG L G LAVFKG Q P LG I+ V +G + V I+ EG CHIF + D+
Sbjct: 10 LEFEFKGNVS-KCAMSLGDVDNDNDYELVVGNLQGDLAVFKGQQCHPWAEKHNLGMIMVVVIGDVL------NEGKNSTVCISGEGLCHIFGMKSDS 99
BLAST of mRNA_P-wetherbeei_contig166.2.1 vs. uniprot
Match: S4RPR8_PETMA (Integrin alpha FG-GAP repeat containing 2 n=5 Tax=Petromyzon marinus TaxID=7757 RepID=S4RPR8_PETMA) HSP 1 Score: 63.2 bits (152), Expect = 1.320e-6 Identity = 52/170 (30.59%), Postives = 66/170 (38.82%), Query Frame = 3
Query: 126 PAAITLGDADNDGGIELVVGGLDGTLAVFKGWQEQPAYVASGLGGIVAVGLGRLFLATGDAKAAPRQLVVIAAEGRCHIF------NIIPDATVGLXXXXXXXXXXXXXXXXXXXXXXXVQVHPIFTLSCPCNVTACTVGDVLCGPEGGSGHPEFVVGTSDGHVHVLGLE 617
P A+ LGDADNDG ELVVG G L+V+KG P +S LG I VG+G +F +V ++ EG CH+F N DA + P P N + D+ G G E VVG +D V L E
Sbjct: 20 PHAMCLGDADNDGLNELVVGDTSGRLSVYKGDGRSPCLSSSSLGMITCVGIGDVF------NQGKNFVVSVSGEGLCHVFFLPWLSNPAQDAPAA------------------EETPQPTAIRPTLQQHIPANTKVLLISDI-----DGDGRCELVVGYTDRVVRALRWE 160
BLAST of mRNA_P-wetherbeei_contig166.2.1 vs. uniprot
Match: A0A151ZGL0_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZGL0_9MYCE) HSP 1 Score: 63.2 bits (152), Expect = 2.160e-6 Identity = 42/105 (40.00%), Postives = 59/105 (56.19%), Query Frame = 3
Query: 60 VRSICLTHQDTLLFEFPSTIAGPAAITLGDADNDGGIELVVGGLDGTLAVFKGWQEQPAYVASGLGGIVAVGLGRLFLATGDAKAAPRQL-VVIAAEGRCHIFNI 371
+R I L D ++F + + AITL D DND ELV+G L+G LA+FKG +P VA LG I + G+L PR L VVI++EG C+I+++
Sbjct: 8 IRHISLV--DRIVFSWKGNVFR-RAITLADVDNDSINELVIGSLEGNLAIFKGTDPKPWRVAHNLGSISCIVAGKL-------GTYPRNLLVVISSEGICNIYDV 102 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig166.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig166.2.1 >prot_P-wetherbeei_contig166.2.1 ID=prot_P-wetherbeei_contig166.2.1|Name=mRNA_P-wetherbeei_contig166.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=834bp MAEVSGDVRSICLTHQDTLLFEFPSTIAGPAAITLGDADNDGGIELVVGGback to top mRNA from alignment at P-wetherbeei_contig166:653..4035+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig166.2.1 ID=mRNA_P-wetherbeei_contig166.2.1|Name=mRNA_P-wetherbeei_contig166.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3383bp|location=Sequence derived from alignment at P-wetherbeei_contig166:653..4035+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig166:653..4035+ >mRNA_P-wetherbeei_contig166.2.1 ID=mRNA_P-wetherbeei_contig166.2.1|Name=mRNA_P-wetherbeei_contig166.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2502bp|location=Sequence derived from alignment at P-wetherbeei_contig166:653..4035+ (Phaeothamnion wetherbeei SAG_119_79)back to top |