mRNA_P-wetherbeei_contig1656.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1656.3.1
Unique NamemRNA_P-wetherbeei_contig1656.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1656.3.1 vs. uniprot
Match: D7G927_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G927_ECTSI)

HSP 1 Score: 332 bits (850), Expect = 5.420e-114
Identity = 161/199 (80.90%), Postives = 185/199 (92.96%), Query Frame = 1 
Query:    1 MKIVSIGILRYNRDTPDPILLSQANDLASFGFFQRQGVKEMATFFSKTIVKRTQPGMRQSVQHEEYNVHVYMRHDGLAGTVTADMEYPPRVAFVMLTQLLEQFNDQIQWQSEMRTEALKFGPLDQAIVEYQQDPAKADKITKIQRDLDETTAVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCIVS 597
            MK+VSI  +RYNRDT +P++LSQ N+L+S+GFFQRQG+KEM TFFSKTIVKRTQPG RQSVQHE+YNVHVYMR DGLAGTVTAD+EYPPRVAFV+LTQLLEQ+ +Q+ WQSE+R EA++F P+D+ IV+YQ DPAKADKITKIQRDLDETT VLHRTID+VLERGV+LDELVDRSDDLSRQSKMFYKQARKTNSCC+VS
Sbjct:    1 MKVVSICTMRYNRDTAEPVMLSQVNELSSYGFFQRQGIKEMCTFFSKTIVKRTQPGQRQSVQHEDYNVHVYMRQDGLAGTVTADLEYPPRVAFVLLTQLLEQYAEQVSWQSEIRHEAIRFPPMDKMIVDYQ-DPAKADKITKIQRDLDETTEVLHRTIDNVLERGVRLDELVDRSDDLSRQSKMFYKQARKTNSCCVVS 198
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BLAST of mRNA_P-wetherbeei_contig1656.3.1 vs. uniprot
Match: A0A836CN50_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN50_9STRA)

HSP 1 Score: 305 bits (782), Expect = 1.240e-103
Identity = 149/198 (75.25%), Postives = 177/198 (89.39%), Query Frame = 1 
Query:    1 MKIVSIGILRYNRDTPDPILLSQANDLASFGFFQRQGVKEMATFFSKTIVKRTQPGMRQSVQHEEYNVHVYMRHDGLAGTVTADMEYPPRVAFVMLTQLLEQFNDQIQWQSEMRTEALKFGPLDQAIVEYQQDPAKADKITKIQRDLDETTAVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCIV 594
            MKI++I +LRY  DTP+ I+LSQA+DL+SFGFFQR G+KEM TFFSKTIVKRT  G RQ+VQHE+YNVHVY+RHDGLA T+TADMEYP RVAFV+L  +++QF++QIQWQ+E R EA+ F P+ QAIV+YQ DPAKADKITKIQRDLD+TT VLH+TI+SVLERGVKLD+LVDRSD LSRQSKMFYKQA+KTNSCC+V
Sbjct:    1 MKILAITMLRYGADTPEAIVLSQASDLSSFGFFQRAGIKEMCTFFSKTIVKRTPAGQRQTVQHEDYNVHVYVRHDGLAATITADMEYPMRVAFVLLMNMMDQFSEQIQWQAETREEAIVFAPMQQAIVDYQ-DPAKADKITKIQRDLDDTTNVLHKTIESVLERGVKLDDLVDRSDSLSRQSKMFYKQAKKTNSCCVV 197
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BLAST of mRNA_P-wetherbeei_contig1656.3.1 vs. uniprot
Match: A0A7S2V281_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V281_9STRA)

HSP 1 Score: 281 bits (720), Expect = 3.780e-94
Identity = 137/201 (68.16%), Postives = 174/201 (86.57%), Query Frame = 1 
Query:    1 MKIVSIGILRYNRDTPDPILLSQANDLASFGFFQRQGVKEMATFFSKTIVKRTQPGMRQSVQHEE--YNVHVYMRHDGLAGTVTADMEYPPRVAFVMLTQLLEQFNDQIQ-WQSEMRTEALKFGPLDQAIVEYQQDPAKADKITKIQRDLDETTAVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCIV 594
            MK++S+ ILRY RDT +P++LSQA DL+S GFFQR GVKE+ TFF++ +VKRT PGMRQ+VQH E  YNVHVY+R DGLAG VT+DMEYPPRVAFVMLTQLL+QF   ++ W++E+R+EA+++ PL +A++ YQ DPA+ADK+TKIQRDLD+TT +LH+TID+VLERG KLD LV+RSDDLSRQSK+FY QARK NSCC++
Sbjct:    1 MKLISVAILRYMRDTAEPVMLSQAADLSSIGFFQRNGVKELLTFFARMLVKRTSPGMRQTVQHNEFDYNVHVYVRADGLAGAVTSDMEYPPRVAFVMLTQLLDQFALDVRGWETEIRSEAIQWPPLGEALIRYQ-DPAEADKVTKIQRDLDQTTEILHKTIDNVLERGEKLDSLVERSDDLSRQSKLFYSQARKANSCCLI 200
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BLAST of mRNA_P-wetherbeei_contig1656.3.1 vs. uniprot
Match: W7TQ86_9STRA (Vamp-like protein ykt62 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ86_9STRA)

HSP 1 Score: 271 bits (694), Expect = 3.200e-90
Identity = 134/200 (67.00%), Postives = 165/200 (82.50%), Query Frame = 1 
Query:    1 MKIVSIGILRYNRDTPDPILLSQANDLASFGFFQRQGVKEMATFFSKTIVKRTQPGMRQSVQHEEYNVHVYMRHDGLAGTVTADMEYPPRVAFVMLTQLLEQFN-DQIQWQSEMRTEALKFGPLDQAIVEYQQDPAKADKITKIQRDLDETTAVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCIVS 597
            MKIV+I + RY RDTP+PI+LS   +L SFG+FQR G++EM  F SKT++KR QPG RQ++QHEEYNVH ++R DGL GTV AD+EYPPRVAFV+L+ LLE+F  D   W S  + E++ + PL +AI EYQ DPAKADKITKI+RDLDETT +LH+TID+VLERGVKLDELV+RS+DLS QSK+FYKQARKTNSCC +S
Sbjct:    1 MKIVAIALHRYQRDTPEPIILSSVTELESFGYFQRNGIREMCRFMSKTLIKRCQPGQRQTIQHEEYNVHCHLRTDGLGGTVIADLEYPPRVAFVLLSTLLERFAVDITNWSSVTQQESVTYPPLQEAIREYQ-DPAKADKITKIRRDLDETTDILHKTIDAVLERGVKLDELVERSNDLSSQSKLFYKQARKTNSCCSIS 199
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BLAST of mRNA_P-wetherbeei_contig1656.3.1 vs. uniprot
Match: A0A6T5MNT8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5MNT8_HETAK)

HSP 1 Score: 266 bits (680), Expect = 4.780e-88
Identity = 132/202 (65.35%), Postives = 165/202 (81.68%), Query Frame = 1 
Query:    1 MKIVSIGILRYNRDTPDPILLSQANDLASFGFFQRQGVKEMATFFSKTIVKRTQPGMRQSVQHEE--YNVHVYMRHDGLAGTVTADMEYPPRVAFVMLTQLLEQFNDQIQ--WQSEMRTEALKFGPLDQAIVEYQQDPAKADKITKIQRDLDETTAVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCIV 594
            MKIVSI ILRY RD  +P++L+QA DL+S GFFQR GV+E+ TFFSK +VKRT+PG RQ+VQH E  YNVH Y+R DGL+GTVTADMEYP RVAF++LTQLL+Q+  ++   W+ E R E + F P DQA+V+YQ DPA ADK+TKIQRDLD+TT +L+ TID+VL RG KLD LV+RSD+LSRQSKMFY QA++ NSCC++
Sbjct:    1 MKIVSIAILRYGRDVEEPVMLTQACDLSSLGFFQRSGVRELLTFFSKLMVKRTEPGTRQTVQHNEFDYNVHTYVRADGLSGTVTADMEYPARVAFLLLTQLLDQYATELSGVWERETRNEVIAFPPADQALVQYQ-DPAAADKVTKIQRDLDQTTEILYNTIDNVLARGEKLDNLVERSDELSRQSKMFYSQAKRANSCCLI 201
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BLAST of mRNA_P-wetherbeei_contig1656.3.1 vs. uniprot
Match: A0A7R9W5E6_9STRA (Hypothetical protein n=4 Tax=Eupodiscales TaxID=33838 RepID=A0A7R9W5E6_9STRA)

HSP 1 Score: 264 bits (675), Expect = 6.610e-87
Identity = 130/201 (64.68%), Postives = 161/201 (80.10%), Query Frame = 1 
Query:    1 MKIVSIGILRYNRDTPDPILLSQANDLASFGFFQRQGVKEMATFFSKTIVKRTQPGMRQSVQHEEYNVHVYMRHDGLAGTVTADMEYPPRVAFVMLTQLLEQFNDQI--QWQSEMRTEALKFGPLDQAIVEYQQDPAKADKITKIQRDLDETTAVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCIVS 597
            +K+V I ILR   D PDPI L  A +L+SFGFFQRQGVKEM TFFSKT  KRTQPG RQS+ HE+Y VH Y+R DGLAG VT D+EYP RVAFV+LTQ+L++F   +   W++    E++ F P++  + +YQ DPA ADK+TKIQ+DLDETT +LH+TIDSVLERG KLD+LV+RSDDLS+QSKMFYKQA+KTNSCC++S
Sbjct:   29 VKVVGISILRTGSDLPDPIPLCMACELSSFGFFQRQGVKEMLTFFSKTFTKRTQPGQRQSITHEQYVVHCYVRSDGLAGAVTTDLEYPARVAFVLLTQILDEFTGAVGDSWKTVTTPESVSFPPIENYLQKYQ-DPATADKVTKIQKDLDETTQILHKTIDSVLERGSKLDDLVERSDDLSKQSKMFYKQAKKTNSCCVIS 228
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BLAST of mRNA_P-wetherbeei_contig1656.3.1 vs. uniprot
Match: A0A6T5VLC8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A6T5VLC8_9STRA)

HSP 1 Score: 258 bits (660), Expect = 4.930e-85
Identity = 130/200 (65.00%), Postives = 161/200 (80.50%), Query Frame = 1 
Query:    1 MKIVSIGILRYNRDTPDPILLSQANDLASFGFFQRQGVKEMATFFSKTIVKRTQPGMRQSVQHEEYNVHVYMRHDGLAGTVTADMEYPPRVAFVMLTQLLEQFNDQI--QWQSEMRTEALKFGPLDQAIVEYQQDPAKADKITKIQRDLDETTAVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCIV 594
            MK+V + ILR      +P+ L+ ANDL+SFG+FQRQGV EM TFFSKT  KRTQPG RQSV HE Y VH Y+R DGLAGTVT+D+EYP RVAFVMLTQ+L+ F  Q    W+ E R E++ F  +++ + ++Q +PA+ADK++KIQ+DLDETT +LH+TIDSVLERGVKLD LV+RSDDLSRQSKMFYKQA+KTNSCCI+
Sbjct:    1 MKVVGLSILRTGPSLDEPLPLAVANDLSSFGYFQRQGVSEMLTFFSKTFSKRTQPGQRQSVTHESYIVHCYVRGDGLAGTVTSDLEYPARVAFVMLTQMLDDFVQQFGDSWKRETRPESMTFPKMEEYLEKFQ-NPAEADKLSKIQKDLDETTEILHQTIDSVLERGVKLDALVERSDDLSRQSKMFYKQAKKTNSCCII 199
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BLAST of mRNA_P-wetherbeei_contig1656.3.1 vs. uniprot
Match: A0A6U0IUG2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0IUG2_9STRA)

HSP 1 Score: 259 bits (661), Expect = 5.750e-85
Identity = 130/201 (64.68%), Postives = 160/201 (79.60%), Query Frame = 1 
Query:    1 MKIVSIGILRYNRDTPDPILLSQANDLASFGFFQRQGVKEMATFFSKTIVKRTQPGMRQSVQHEEYNVHVYMRHDGLAGTVTADMEYPPRVAFVMLTQLLEQFNDQI--QWQSEMRTEALKFGPLDQAIVEYQQDPAKADKITKIQRDLDETTAVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCIVS 597
            MK+VSI ILR   D  +PI +S A +L+S+GFFQRQGVKEM TFFSKT  KRT PG RQS++HE Y VH Y+R DGLAGTVT D+EYP RVAFV+LTQLL++F   +   W+S    E++ F  +++ + +YQ DPA ADK+TKIQ+DLDETT +LH+TIDSVLERGVKLD LV+RS+DLS QSKMFYKQA+KTNSCC +S
Sbjct:   16 MKVVSIAILRTGPDVAEPIPVSMACELSSYGFFQRQGVKEMLTFFSKTFTKRTDPGQRQSIEHESYVVHCYVRSDGLAGTVTTDLEYPARVAFVLLTQLLDEFQQTVGDSWRSVTTPESVTFPKIEEYLQKYQ-DPAAADKVTKIQQDLDETTQILHKTIDSVLERGVKLDSLVERSNDLSAQSKMFYKQAKKTNSCCTIS 215
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BLAST of mRNA_P-wetherbeei_contig1656.3.1 vs. uniprot
Match: A0A7S2I938_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I938_9STRA)

HSP 1 Score: 258 bits (658), Expect = 7.060e-84
Identity = 130/201 (64.68%), Postives = 160/201 (79.60%), Query Frame = 1 
Query:    1 MKIVSIGILRYNRDTPDPILLSQANDLASFGFFQRQGVKEMATFFSKTIVKRTQPGMRQSVQHEEYNVHVYMRHDGLAGTVTADMEYPPRVAFVMLTQLLEQFNDQI--QWQSEMRTEALKFGPLDQAIVEYQQDPAKADKITKIQRDLDETTAVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCIVS 597
            MKIV + ILR  +D  +PI L+ A DL+S+G+FQRQGVKEM TFFSKT  KRT PG RQS+ HE Y VH Y+R DGLAG VT+D EYP RVAFV+LTQLLE+F   +   W++    E++ F P++  + +YQ DPA ADK+TKIQ+DLDETT+VLH+TIDSVLERG KLD LV++SDDLSRQSKMFYKQA+KTNSCC++S
Sbjct:   60 MKIVGLTILRTGKDVEEPIPLTTACDLSSYGYFQRQGVKEMLTFFSKTFTKRTAPGQRQSITHESYVVHCYVRSDGLAGVVTSDAEYPSRVAFVLLTQLLEEFLQTVGDSWKTVTAPESVAFPPIETYLQKYQ-DPAAADKVTKIQQDLDETTSVLHKTIDSVLERGEKLDSLVEKSDDLSRQSKMFYKQAKKTNSCCVIS 259
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BLAST of mRNA_P-wetherbeei_contig1656.3.1 vs. uniprot
Match: A0A7S2LY35_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LY35_9STRA)

HSP 1 Score: 256 bits (653), Expect = 2.100e-83
Identity = 134/202 (66.34%), Postives = 162/202 (80.20%), Query Frame = 1 
Query:    1 MKIVSIGILRYNRDTPDPILLSQANDLASFGFFQRQGVKEMATFFSKTIVKRTQPGMRQSVQHEEYNVHVYMRHDGLAGTVTADMEYPPRVAFVMLTQLLEQF--NDQIQWQS-EMRTEALKFGPLDQAIVEYQQDPAKADKITKIQRDLDETTAVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCIVS 597
            MK+VSI ILR    + +P  ++ A DL+S+GFFQRQGVKEM TFFSKT  KRT+PG RQS+ HE Y VH Y+R DGLAG+VT D EYPPRVAFV+LTQLL++F   +   W+S    TE+  F PL++ IV+YQ DPA ADK+TKIQ DL+ETT +LH+TIDSVLERGVKLD LV++SDDLSRQSKMFYKQA+KTNSCC+VS
Sbjct:   40 MKVVSITILRTT-PSAEPTPIAMACDLSSYGFFQRQGVKEMLTFFSKTFTKRTEPGQRQSISHESYVVHCYVRSDGLAGSVTTDAEYPPRVAFVLLTQLLDEFLSTNGDSWKSMPTLTESTVFPPLEEYIVKYQ-DPASADKVTKIQNDLEETTQILHKTIDSVLERGVKLDSLVEKSDDLSRQSKMFYKQAKKTNSCCVVS 239
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1656.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G927_ECTSI5.420e-11480.90Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A836CN50_9STRA1.240e-10375.25Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A7S2V281_9STRA3.780e-9468.16Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TQ86_9STRA3.200e-9067.00Vamp-like protein ykt62 n=2 Tax=Monodopsidaceae Ta... [more]
A0A6T5MNT8_HETAK4.780e-8865.35Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9W5E6_9STRA6.610e-8764.68Hypothetical protein n=4 Tax=Eupodiscales TaxID=33... [more]
A0A6T5VLC8_9STRA4.930e-8565.00Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A6U0IUG2_9STRA5.750e-8564.68Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2I938_9STRA7.060e-8464.68Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2LY35_9STRA2.100e-8366.34Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1656contigP-wetherbeei_contig1656:1647..3166 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G927
Preferred nameYKT6
PFAMsLongin,Synaptobrevin
Model size600
Max annot lvl2759|Eukaryota
KEGG rclassRC00438,RC00439,RC00603,RC00604
KEGG koko:K01623,ko:K08516,ko:K18999
KEGG ReactionR01068,R01070,R01829,R02568
KEGG Pathwayko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04130,ko04138,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04130,map04138
KEGG ModuleM00001,M00003,M00165,M00167
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000149,GO:0000322,GO:0000323,GO:0000324,GO:0003674,GO:0003824,GO:0005484,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005768,GO:0005773,GO:0005783,GO:0005793,GO:0005794,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0006887,GO:0006888,GO:0006890,GO:0006891,GO:0006903,GO:0006904,GO:0006906,GO:0006996,GO:0007033,GO:0008104,GO:0008150,GO:0009987,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016409,GO:0016417,GO:0016482,GO:0016740,GO:0016746,GO:0016747,GO:0019706,GO:0019707,GO:0022406,GO:0030133,GO:0030425,GO:0030659,GO:0031090,GO:0031201,GO:0031224,GO:0031226,GO:0031410,GO:0031982,GO:0031984,GO:0032940,GO:0032991,GO:0033036,GO:0033116,GO:0034613,GO:0036477,GO:0042144,GO:0042147,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044297,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0048193,GO:0048278,GO:0048284,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0061024,GO:0061025,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0090174,GO:0097440,GO:0097441,GO:0097447,GO:0097458,GO:0097576,GO:0097708,GO:0098588,GO:0098791,GO:0098796,GO:0120025,GO:0120038,GO:0140029,GO:0140056,GO:0140096
Exons4
Evalue8.88e-115
EggNOG OGsCOG5143@1|root,KOG0861@2759|Eukaryota
EC3.1.3.16,4.1.2.13
DescriptionSNAP receptor activity
Cds size600
COG categoryU
BRITEko00000,ko00001,ko00002,ko01000,ko01009,ko03021,ko03036,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186090.5405629-CDS-P-wetherbeei_contig1656:1646..17561683186090.5405629-CDS-P-wetherbeei_contig1656:1646..1756Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1656 1647..1756 +
1683186090.5537043-CDS-P-wetherbeei_contig1656:1930..21381683186090.5537043-CDS-P-wetherbeei_contig1656:1930..2138Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1656 1931..2138 +
1683186090.563392-CDS-P-wetherbeei_contig1656:2593..26681683186090.563392-CDS-P-wetherbeei_contig1656:2593..2668Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1656 2594..2668 +
1683186090.5730689-CDS-P-wetherbeei_contig1656:2959..31661683186090.5730689-CDS-P-wetherbeei_contig1656:2959..3166Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1656 2960..3166 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1656.3.1prot_P-wetherbeei_contig1656.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1656 1647..3166 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1656.3.1

>prot_P-wetherbeei_contig1656.3.1 ID=prot_P-wetherbeei_contig1656.3.1|Name=mRNA_P-wetherbeei_contig1656.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=200bp
MKIVSIGILRYNRDTPDPILLSQANDLASFGFFQRQGVKEMATFFSKTIV
KRTQPGMRQSVQHEEYNVHVYMRHDGLAGTVTADMEYPPRVAFVMLTQLL
EQFNDQIQWQSEMRTEALKFGPLDQAIVEYQQDPAKADKITKIQRDLDET
TAVLHRTIDSVLERGVKLDELVDRSDDLSRQSKMFYKQARKTNSCCIVS*
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mRNA from alignment at P-wetherbeei_contig1656:1647..3166+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1656.3.1 ID=mRNA_P-wetherbeei_contig1656.3.1|Name=mRNA_P-wetherbeei_contig1656.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1520bp|location=Sequence derived from alignment at P-wetherbeei_contig1656:1647..3166+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGATCGTGTCAATCGGGATCCTGCGATACAACCGGGACACGCCCGA
CCCGATATTGCTGTCGCAGGCCAATGACCTCGCTTCTTTCGGGTTTTTCC
AACGACAAGGGTGAGTTATGAGGAGGAAGGCAACGGTGTTGCCTGCAATG
CTCTTGCAGGGCCGCCGCCTTGTTTTCCTGTCATGCTTTGCCGATCAATT
TCGTTTCGACGTAAAGCATTTGTGGAACTTCATCACTCCTTTTTCCTTTC
GTCGCCGTCGACCTCCCTCTTCTTCGCCCCCCAGGGTGAAGGAGATGGCG
ACCTTCTTTAGCAAGACGATCGTGAAGCGGACGCAGCCGGGAATGCGGCA
GAGTGTGCAGCACGAGGAGTACAACGTGCACGTCTATATGCGGCACGACG
GCCTTGCCGGAACCGTCACGGCTGACATGGAGTACCCGCCGCGGGTGGCG
TTCGTCATGCTCACGCAGCTGCTGGAGCAGTTCAACGACCAGGTGAAGGA
GGGAAGAGGAAAGCGATTTCGTTTTTCTATTGGGGGAACCAAAACGGAAA
CGATCGGTCCAGGACGGTTCTGGGCGACTTTCGGGTAGCCGAAGCGCGCG
CGCGGGGGCGTGCCGATGCCGCATGGCGCTGCCGGTAGGCTGCCGGTCTC
GCGGGAACCCCTCCCTTTTTGTGTCGAGATGTGTTTAATGTGGGGAAAAC
TGCTTCGGCCTTCCGCTGCCGTGTCATTTGGGGCTCTCTCCGCCCGCAGG
GAAAGCCACCGGCGTTATTTCTGGCGCACTTTGGACGTAGACATCTTAGA
AATTGGCCGGCCATGAAAAATTAAGCTTTGACGGAGTACCACCCAGCGAA
GAGGGCCGATTTCCTCGCGTAGGAAGCGGCAAAAAGCTCATTCTCACTCT
CTGACCTTCCTTCGCTCTGCACTTCTTCTTCGCCTCTGTGTTTGCAGATT
CAATGGCAGTCCGAAATGAGAACAGAAGCCCTCAAGTTCGGTCCGTTGGA
TCAGGCGATCGTCGAGTACCAGGTCGGCGGCGAAAACTGTCGCTTCTCTT
TCGCAGGGTCTTTCGCAGGATCTCCCCCCTTCGGACGTGGTTCCCCGCTG
GTTCTAAGGATGCAAGGTTTACCGCTCTGTATTTTGGGGCGCGATATGTC
TCCAAAAAGCCCTCTCTGACCATCCGCTGGCATTCCTCTTCCCTCCTCTG
GCTTTCCGCTTTGCATTCCACATTCCTGCCTGCCGACAATTCCCTGGCAC
CCCCCGACATCGGAAACCGGAAATCGGATCGCTGGAATCGCCACCCGACC
GGACCGGAGCAAGCAGGACCCGGCGAAGGCCGACAAAATCACCAAGATCC
AACGGGACCTGGACGAGACCACGGCGGTCCTCCACCGGACCATCGACAGC
GTCCTGGAGCGCGGTGTTAAGCTCGACGAGCTGGTGGACCGCTCCGACGA
CCTCAGCCGCCAGTCGAAGATGTTCTACAAGCAGGCGCGAAAAACCAACA
GCTGCTGCATCGTCAGCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1656:1647..3166+

>mRNA_P-wetherbeei_contig1656.3.1 ID=mRNA_P-wetherbeei_contig1656.3.1|Name=mRNA_P-wetherbeei_contig1656.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=600bp|location=Sequence derived from alignment at P-wetherbeei_contig1656:1647..3166+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGATCGTGTCAATCGGGATCCTGCGATACAACCGGGACACGCCCGA
CCCGATATTGCTGTCGCAGGCCAATGACCTCGCTTCTTTCGGGTTTTTCC
AACGACAAGGGGTGAAGGAGATGGCGACCTTCTTTAGCAAGACGATCGTG
AAGCGGACGCAGCCGGGAATGCGGCAGAGTGTGCAGCACGAGGAGTACAA
CGTGCACGTCTATATGCGGCACGACGGCCTTGCCGGAACCGTCACGGCTG
ACATGGAGTACCCGCCGCGGGTGGCGTTCGTCATGCTCACGCAGCTGCTG
GAGCAGTTCAACGACCAGATTCAATGGCAGTCCGAAATGAGAACAGAAGC
CCTCAAGTTCGGTCCGTTGGATCAGGCGATCGTCGAGTACCAGCAGGACC
CGGCGAAGGCCGACAAAATCACCAAGATCCAACGGGACCTGGACGAGACC
ACGGCGGTCCTCCACCGGACCATCGACAGCGTCCTGGAGCGCGGTGTTAA
GCTCGACGAGCTGGTGGACCGCTCCGACGACCTCAGCCGCCAGTCGAAGA
TGTTCTACAAGCAGGCGCGAAAAACCAACAGCTGCTGCATCGTCAGCTAG
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