mRNA_P-wetherbeei_contig1656.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1656.1.1
Unique NamemRNA_P-wetherbeei_contig1656.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1656.1.1 vs. uniprot
Match: A0A835ZB63_9STRA (Transmembrane 9 superfamily member n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB63_9STRA)

HSP 1 Score: 362 bits (930), Expect = 1.670e-118
Identity = 172/262 (65.65%), Postives = 204/262 (77.86%), Query Frame = 1
Query:   61 HAVAAFYLPGVAPRDFEPGERVEVKVNKLTSVHTQLPMDYYSMPFCKPKGGVLMQAENLGEFLTGDRIENSPYKIYMRHDQACKVLCQEAIDAKHVARLKEAIKREYRHNWIVDNLPAASIVDSAAYQTTSYSQGFPVGYEENGHYYLYNHVRLLVDYHPMGDPENPSGRVVGFFAEPFSVAHRFKAGAKWDGENAEDAPPLETCAADDLQRPIKPGAAPQEVAADAPLLFTYDVVWQPSQTKWASRWDIYLTMDHAVPNKV 846
            HA +AFYLPGVAP +F  GE+V +KVNKLTSVHTQLPMDYYS+PFC+PK GV + AENLGEFLTGDRIENSPYK+YM+H++ACKVLCQ+   A  V RL  AIKR+YRHNWIVDN+PAAS+++ +    TSYSQGF VG EE G +Y+ NHVR+L+DY+PM    +P  RVVG + EPFSV H FKAGAKWDG  A D PPL+TCAA      ++PG   QEV A+AP LFTYDVVW+ S   WASRWDIYL ++ AVP KV
Sbjct:   17 HAASAFYLPGVAPLNFGAGEQVVIKVNKLTSVHTQLPMDYYSLPFCRPKNGVQIYAENLGEFLTGDRIENSPYKVYMQHNEACKVLCQQQFTAPEVERLTTAIKRQYRHNWIVDNMPAASVLEVSDQLQTSYSQGFLVGTEELGKFYINNHVRILLDYYPMAATPDPPARVVGVYVEPFSVKHAFKAGAKWDGSEANDIPPLDTCAAGSDVESLRPGTPKQEVVANAPTLFTYDVVWRESDKPWASRWDIYLNLNGAVPAKV 278          
BLAST of mRNA_P-wetherbeei_contig1656.1.1 vs. uniprot
Match: A0A836CR71_9STRA (Transmembrane 9 superfamily member n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR71_9STRA)

HSP 1 Score: 341 bits (875), Expect = 6.050e-110
Identity = 174/283 (61.48%), Postives = 203/283 (71.73%), Query Frame = 1
Query:   37 AACLAAGPHAVAAFYLPGVAPRDFEPGERVEVKVNKLTSVHTQLPMDYYSMPFCKPKGGVLMQAENLGEFLTGDRIENSPYKIYMRHDQACKVLCQEAIDAKHVARLKEAIKREYRHNWIVDNLPAASIVDSAAYQTTSYSQGFPVGYEE-NGHYYLYNHVRLLVDYHPMGDPEN------------PSGRVVGFFAEPFSVAHRFKAGAKWDGENAEDAPPLETCAADDLQRPIKPGAAPQEVAADAPLLFTYDVVWQPSQTKWASRWDIYLTMDHAVPNKV 846
            AA L A  H   +FYLPGVAP  FE G RVEVKVNKLTSVHTQLPMDYYS+PFCKPKGGV M AENLGEFL+GDRIENSPY IYM H++ CKVLCQ+   A  V +L+ AIKR+YRHNWIVDNLPAAS+++ +    TSY+QGF VG E+ NG Y++ NHVRL++DYHP     +            P  RVVGF  EPFSV H FKAG +WDG +A D PPLETC+ D     I  GA  QEV A+ P+LFTYDVVW+ S  +WASRWDIYL ++  VP  V
Sbjct:   10 AAALGALTHEACSFYLPGVAPYSFETGGRVEVKVNKLTSVHTQLPMDYYSLPFCKPKGGVKMYAENLGEFLSGDRIENSPYNIYMHHNENCKVLCQQHFTAADVIKLRTAIKRQYRHNWIVDNLPAASVIEVSDQLATSYTQGFLVGTEDANGVYHINNHVRLMIDYHPAAGGSSTQAEGAGALDKLPPARVVGFQVEPFSVRHAFKAGGRWDGLSA-DVPPLETCSRDAAASSIAAGAPRQEVLAEVPVLFTYDVVWRESAVRWASRWDIYLNLNGQVPATV 291          
BLAST of mRNA_P-wetherbeei_contig1656.1.1 vs. uniprot
Match: F0YPC2_AURAN (Transmembrane 9 superfamily member n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YPC2_AURAN)

HSP 1 Score: 310 bits (793), Expect = 5.880e-98
Identity = 157/270 (58.15%), Postives = 192/270 (71.11%), Query Frame = 1
Query:   64 AVAAFYLPGVAPRDFEPGERVEVK----VNKLTSVHTQLPMDYYSMPFCKPKGGVLMQAENLGEFLTGDRIENSPYKIYMRHDQACKVLCQEAIDAKHVARLKEAIKREYRHNWIVDNLPAASIVDSAAYQTTSYSQGFPVGYEEN--GHYYLYNHVRLLVDYHPMGDPENPSGRVVGFFAEPFSVAHRFKAGAKWDGENAEDAPPLETCAAD---DLQRPIKPGAAPQEVAADAPLLFTYDVVWQPSQTKWASRWDIYLTMDHAVPNKV 846
            A  AFYLPGVAPR+++ GE+VE+K    VNKLTSVHTQLP DYYS  FCKP GGV   AENLGEFL+GDRIENSPY +YMR D+ CK+LCQ  ++  HVA+ K +I   Y HNWIVDN+PAAS++D+ A+ TTSYS+GFPVGY +   G +YLYNH  ++V+YH      N   R+VGF+ EPFSV H+F  G  W G   EDAP LETC+     DL R    G A   +     +L+TYD+VW+PS  KWASRWDIYL+MD+AVP KV
Sbjct:   14 AARAFYLPGVAPREYKSGEKVELKARPDVNKLTSVHTQLPYDYYSHKFCKPHGGVKTTAENLGEFLSGDRIENSPYALYMRTDEYCKILCQVKLNGGHVAQFKRSIDEAYHHNWIVDNIPAASVIDTEAFVTTSYSRGFPVGYYDRLAGKHYLYNHANIVVEYHEAVPDGN---RIVGFYVEPFSVDHKFVGGTAWSGN--EDAPALETCSIFEPMDLDRAKDHGLA---LTKSTKVLYTYDIVWKPSNIKWASRWDIYLSMDNAVPKKV 275          
BLAST of mRNA_P-wetherbeei_contig1656.1.1 vs. uniprot
Match: A0A8J2SYF7_9STRA (Transmembrane 9 superfamily member n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYF7_9STRA)

HSP 1 Score: 312 bits (799), Expect = 4.570e-97
Identity = 153/260 (58.85%), Postives = 191/260 (73.46%), Query Frame = 1
Query:   73 AFYLPGVAPRDFEPGERVEVKVNKLTSVHTQLPMDYYSMPFCKPKGGVLMQAENLGEFLTGDRIENSPYKIYMRHDQACKVLCQEAIDAKHVARLKEAIKREYRHNWIVDNLPAASIVDSAAYQTTSYSQGFPVGYEENGHYYLYNHVRLLVDYHPMGDPENPSGRVVGFFAEPFSVAHRFKAGAKWDGENAEDAPPLETCAADDLQRPI--KPGAAPQEVAADAPLLFTYDVVWQPSQTKWASRWDIYLTMDHAVPNKV 846
            AFYLPGVAPR F  G++VE+KVNKLTSVHTQ+P DYYS+ FC+P+GG+    ENLGEFL+GD IENSPY ++M  DQ CKVLCQ  +    VA LK  I+ EY HNWI+DNLPAASIVDS  Y  T+Y+ GFPVGY+++   YL+NHV ++V+YHP+ D      RVVGF+ EPF+V H+F   AKWDG    +APPL TC   D   P+  +  AA Q+V    P++FTYDV+W+ S  KWASRWDIYL+MD+AVP+KV
Sbjct:   20 AFYLPGVAPRTFRYGDKVELKVNKLTSVHTQIPYDYYSLKFCRPRGGIKQATENLGEFLSGDLIENSPYHLFMEQDQFCKVLCQVDLTKSDVAALKTIIREEYHHNWIIDNLPAASIVDSEQYIITAYAGGFPVGYQDHKASYLFNHVNIIVEYHPLDD----GSRVVGFYVEPFTVKHKFANDAKWDGSG--EAPPLSTC---DKSGPMVYEAIAAKQDVQT-GPVIFTYDVLWRASNVKWASRWDIYLSMDNAVPDKV 269          
BLAST of mRNA_P-wetherbeei_contig1656.1.1 vs. uniprot
Match: A0A7S2DQ66_9STRA (Transmembrane 9 superfamily member n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DQ66_9STRA)

HSP 1 Score: 306 bits (784), Expect = 1.060e-96
Identity = 145/258 (56.20%), Postives = 181/258 (70.16%), Query Frame = 1
Query:   76 FYLPGVAPRDFEPGERVEVKVNKLTSVHTQLPMDYYSMPFCKPKGGVLMQAENLGEFLTGDRIENSPYKIYMRHDQACKVLCQEAIDAKHVARLKEAIKREYRHNWIVDNLPAASIVDSAAYQTTSYSQGFPVGYEENGHYYLYNHVRLLVDYHPMGDPENPSGRVVGFFAEPFSVAHRFKAGAKWDGENAEDAPPLETCAADDLQRP-IKPGAAPQEVAADAPLLFTYDVVWQPSQTKWASRWDIYLTMDHAVPNKV 846
            FYLPGVAPR F  G++VE+KVNKL+SVHTQLP+DYY+  FCKP GGV    ENLGEFL GDRIENSPY++YM  DQ C +LC E      V   K  I+ EY HNWI+DNLPAASI+DS  Y TT+Y+ GFPVGY +NG  Y++NHV ++V+YHP+ D      RVVGF+ EPF+V H+F     WDG +   APP+ TC   D   P +    A ++      +LFTYDV+W+ S  +WASRWDIYL+MD+AVP+KV
Sbjct:   22 FYLPGVAPRTFRYGDKVELKVNKLSSVHTQLPLDYYANKFCKPHGGVKQATENLGEFLGGDRIENSPYQLYMEQDQFCNILCMETFKTHDVQNFKTIIEEEYHHNWIIDNLPAASILDSEQYITTTYAGGFPVGYSQNGKTYIFNHVNIVVEYHPLDD----GSRVVGFYVEPFTVKHKFVNDQVWDGSDIRTAPPIATC---DKSGPMVYESIADKQEVKSGNVLFTYDVLWRASSVEWASRWDIYLSMDNAVPDKV 272          
BLAST of mRNA_P-wetherbeei_contig1656.1.1 vs. uniprot
Match: A0A7S2SNL2_9STRA (Transmembrane 9 superfamily member n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNL2_9STRA)

HSP 1 Score: 305 bits (782), Expect = 2.220e-96
Identity = 148/259 (57.14%), Postives = 183/259 (70.66%), Query Frame = 1
Query:   73 AFYLPGVAPRDFEPGERVEVKVNKLTSVHTQLPMDYYSMPFCKPKGGVLMQAENLGEFLTGDRIENSPYKIYMRHDQACKVLCQEAIDAKHVARLKEAIKREYRHNWIVDNLPAASIVDSAAYQTTSYSQGFPVGYEENGHYYLYNHVRLLVDYHPMGDPENPSGRVVGFFAEPFSVAHRFKAGAKWDGENAEDAPPLETCAADDLQRP-IKPGAAPQEVAADAPLLFTYDVVWQPSQTKWASRWDIYLTMDHAVPNKV 846
            AFYLPGVAPR F  G+RVE+KVNKLTSVHTQLP DYY + FCKPK GV+   ENLGEFLTGDRIENSPY+++M  D  C +LC E   +  V + K+AI+ EY HNWI+DNLPAASI+D+  Y TT+Y+ GFPVGY + G  YL+NHV ++V+YHP+ D      RVVGF+ EPF+V HRF     WDG++   APPL +C   D   P I      ++      +LFTYDV+W+ S   WASRWDIYL+MD AVP+KV
Sbjct:   23 AFYLPGVAPRTFRYGDRVELKVNKLTSVHTQLPTDYYGLKFCKPKHGVIRANENLGEFLTGDRIENSPYQLFMEQDMFCNILCLENFKSSDVTKFKKAIREEYHHNWIIDNLPAASILDTDQYITTTYAGGFPVGYFDGGKTYLFNHVNIIVEYHPLDD----GSRVVGFYVEPFTVKHRFVNFQTWDGDDIRTAPPLASC---DKNGPMIFESIKEKQEVKPGNVLFTYDVMWRASNVPWASRWDIYLSMDDAVPDKV 274          
BLAST of mRNA_P-wetherbeei_contig1656.1.1 vs. uniprot
Match: F0Y8I7_AURAN (Transmembrane 9 superfamily member n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8I7_AURAN)

HSP 1 Score: 305 bits (781), Expect = 2.620e-96
Identity = 149/260 (57.31%), Postives = 191/260 (73.46%), Query Frame = 1
Query:   73 AFYLPGVAPRDFEPGERVEVKVNKLTSVHTQLPMDYYSMPFCKPKGGVLMQAENLGEFLTGDRIENSPYKIYMRHDQACKVLCQEAIDAKHVARLKEAIKREYRHNWIVDNLPAASIVDSAAYQTTSYSQGFPVGYEENGHYYLYNHVRLLVDYHPMGDPENPSGRVVGFFAEPFSVAHRFKAGAKWDGENAEDAPPLETCAADDLQRPI--KPGAAPQEVAADAPLLFTYDVVWQPSQTKWASRWDIYLTMDHAVPNKV 846
            AFYLPGVAPR F  G++VE+KVNKLTSVHTQ+P DYYS+ FC+P+GG+    ENLGEFL GD IENSP++++M  DQ CKVLCQ  +    V+ LK  IK EY +NWI+DNLPAASIVDS  Y  T+Y+ GFPVGY+++   YL+NHV ++V+YHP+ D      RVVGF+ EPF+V HRF   AKWDG++  +AP LETC   D   P+  +  AA Q+V+    ++FTYDV+W+ S  KWASRWDIYL+MD+ V +KV
Sbjct:   16 AFYLPGVAPRTFRYGDKVELKVNKLTSVHTQIPYDYYSLKFCRPRGGIKRATENLGEFLGGDLIENSPFQLFMEQDQFCKVLCQVDLAKSDVSALKTIIKEEYHNNWIIDNLPAASIVDSEQYIITAYAGGFPVGYQDHKASYLFNHVNIIVEYHPLDD----GSRVVGFYVEPFTVKHRFAGDAKWDGKDVAEAPVLETC---DKSGPMVYESIAAKQDVSVGT-VVFTYDVLWRASNVKWASRWDIYLSMDNQVSDKV 267          
BLAST of mRNA_P-wetherbeei_contig1656.1.1 vs. uniprot
Match: A0A8J2SB64_9STRA (Transmembrane 9 superfamily member n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SB64_9STRA)

HSP 1 Score: 301 bits (770), Expect = 1.360e-94
Identity = 147/263 (55.89%), Postives = 188/263 (71.48%), Query Frame = 1
Query:   73 AFYLPGVAPRDFEPGERVEVKVNKLTSVHTQLPMDYYSMPFCKPKGGVLMQAENLGEFLTGDRIENSPYKIYMRHDQACKVLCQEAIDAKHVARLKEAIKREYRHNWIVDNLPAASIVDSAAYQTTSYSQGFPVGYEE--NGHYYLYNHVRLLVDYHPMGDPENPSGRVVGFFAEPFSVAHRFKAGAKWDGENAEDAPPLETCAADDLQRPIKPGAAPQEVAA---DAPLLFTYDVVWQPSQTKWASRWDIYLTMDHAVPNKV 846
            AFYLPGVAPR++E GE+VE+KVNKLTSV TQLP DYYS  FCKP GGV   AENLGEFL+GDRIENSPY ++MR D+ CKVLCQ  ++A ++ + K +I   Y HNWIVDN+PAAS++D+ ++ TTSYS+GFPVGY +  +G ++LYNH  ++++YH      N   R+VGF+ EPFSV H F  G  WDG++    P L+TC+      P+    A     A      +LFTYD+VW+PS  KWASRWDIYL+MD+AVP KV
Sbjct:   17 AFYLPGVAPREYESGEKVELKVNKLTSVRTQLPYDYYSHKFCKPHGGVQATAENLGEFLSGDRIENSPYLLFMRMDEYCKVLCQTKLNAHNILQFKRSIDEWYHHNWIVDNIPAASVIDTESFVTTSYSRGFPVGYYDRVSGKHFLYNHANIVIEYHEAVPGGN---RIVGFYVEPFSVQHEFVGGVSWDGKDT--TPALQTCS---TAEPMDLNQAKDHALALTKSIEVLFTYDIVWKPSNIKWASRWDIYLSMDNAVPKKV 271          
BLAST of mRNA_P-wetherbeei_contig1656.1.1 vs. uniprot
Match: A0A7S3JWT0_9STRA (Transmembrane 9 superfamily member (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JWT0_9STRA)

HSP 1 Score: 283 bits (725), Expect = 9.200e-92
Identity = 145/268 (54.10%), Postives = 185/268 (69.03%), Query Frame = 1
Query:   67 VAAFYLPGVAPRDFEPGERVEVKVNKLTSVHTQLPMDYYSMPFCKPKGGVLMQAENLGEFLTGDRIENSPYKIYMRHDQACKVLCQEAIDAKHVARLKEAIKREYRHNWIVDNLPAASIVDSAAYQTTSYSQGFPVGYEEN--GHYYLYNHVRLLVDYHPMGDPENPSGRVVGFFAEPFSVAHRFKAGAKWDGENAED---APPLETCAAD---DLQRPIKPGAAPQEVAADAPLLFTYDVVWQPSQTKWASRWDIYLTMDHAVPNKV 846
            V+ FYLPGVAPR+++ G++VE+KVNKLTSVHTQ+P DYYS  FCKPKGGV   AENLGEFLTGDRIENSPY + MR D+ CK+LCQ  + A    + K +I   Y HNWIVDN+PAAS++D+  Y TTSYS+GFPVGY +   G ++LYNH  ++++YH   +  N   R+VGF+ EPFS+ H+F     +     +    AP  ETC+ +   DL    K  A    V   A +L+TYDVVW+ S  KWASRWDIYL+MD+AVP KV
Sbjct:   18 VSGFYLPGVAPREYKVGDKVELKVNKLTSVHTQIPYDYYSHKFCKPKGGVQQSAENLGEFLTGDRIENSPYALLMRVDEYCKILCQVKLTASQAQQFKHSIDEAYHHNWIVDNIPAASVIDTEQYVTTSYSRGFPVGYYDRVVGKHFLYNHASIVIEYHEAIENGN---RIVGFYVEPFSIEHKFPQNMDYKSSTIDGKQVAP--ETCSTERAMDLDLVKK--ADHLFVQKGAKVLYTYDVVWRSSMIKWASRWDIYLSMDNAVPKKV 278          
BLAST of mRNA_P-wetherbeei_contig1656.1.1 vs. uniprot
Match: A0A7S2FBA4_9STRA (Transmembrane 9 superfamily member n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FBA4_9STRA)

HSP 1 Score: 292 bits (748), Expect = 1.670e-91
Identity = 142/263 (53.99%), Postives = 185/263 (70.34%), Query Frame = 1
Query:   88 GVAPRDFEPGERVEVKVNKLTSVHTQLPMDYYSMPFCKPKGGVLMQAENLGEFLTGDRIENSPYKIYMRHDQACKVLCQEAIDAKHVARLKEAIKREYRHNWIVDNLPAASIVDSAAYQTTSYSQGFPVGY--EENGHYYLYNHVRLLVDYHPMGDPENPSGRVVGFFAEPFSVAHRFKAGAKWDGENAEDAPPLETCAADDLQRPIKPGAAPQEV--------AADAPLLFTYDVVWQPSQTKWASRWDIYLTMDHAVPNKV 846
            GVAPR F  G++VE+KVNKLTSVHTQLP DYY++ FC+P GGV   +ENLGEFLTGDRI++SPY+++MR D  C VLCQ       V   K++I   Y HNWI+DNLPAAS++D+  Y TTSYS+GFPVGY  E    +++YNHV ++V YH +   EN   RVVGF+ EPFSV H+F AG+KWDG+  +  PPL+TC   D  +P+   +   E         +    ++FTYDV+WQPS+  WASRWDIYL+MD+A+P+KV
Sbjct:    1 GVAPRTFRYGDKVELKVNKLTSVHTQLPYDYYTVKFCEPHGGVQQASENLGEFLTGDRIDSSPYQLFMRDDSYCNVLCQTHYSKDEVETFKKSINEGYHHNWIIDNLPAASVIDTEEYITTSYSRGFPVGYMHEVKKEHFIYNHVNIVVKYHELSPDEN---RVVGFYVEPFSVEHKFSAGSKWDGD-LDLVPPLDTC---DKSKPMDLESIKTEQKLISSSSSSKKGQIIFTYDVIWQPSEVHWASRWDIYLSMDNAIPDKV 256          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1656.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZB63_9STRA1.670e-11865.65Transmembrane 9 superfamily member n=1 Tax=Tribone... [more]
A0A836CR71_9STRA6.050e-11061.48Transmembrane 9 superfamily member n=1 Tax=Tribone... [more]
F0YPC2_AURAN5.880e-9858.15Transmembrane 9 superfamily member n=2 Tax=Aureoco... [more]
A0A8J2SYF7_9STRA4.570e-9758.85Transmembrane 9 superfamily member n=1 Tax=Pelagom... [more]
A0A7S2DQ66_9STRA1.060e-9656.20Transmembrane 9 superfamily member n=1 Tax=Dictyoc... [more]
A0A7S2SNL2_9STRA2.220e-9657.14Transmembrane 9 superfamily member n=1 Tax=Rhizoch... [more]
F0Y8I7_AURAN2.620e-9657.31Transmembrane 9 superfamily member n=2 Tax=Aureoco... [more]
A0A8J2SB64_9STRA1.360e-9455.89Transmembrane 9 superfamily member n=1 Tax=Pelagom... [more]
A0A7S3JWT0_9STRA9.200e-9254.10Transmembrane 9 superfamily member (Fragment) n=1 ... [more]
A0A7S2FBA4_9STRA1.670e-9153.99Transmembrane 9 superfamily member n=2 Tax=Florenc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1656contigP-wetherbeei_contig1656:188..1039 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog44056.XP_009042262.1
PFAMsEMP70
Model size852
Max annot lvl2759|Eukaryota
KEGG koko:K17086
Hectar predicted targeting categorysignal peptide
Exons1
Evalue9.64e-99
EggNOG OGsKOG1278@1|root,KOG1278@2759|Eukaryota
Descriptionpositive regulation of protein exit from endoplasmic reticulum
Cds size852
COG categoryS
BRITEko00000,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186090.5071886-CDS-P-wetherbeei_contig1656:187..10391683186090.5071886-CDS-P-wetherbeei_contig1656:187..1039Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1656 188..1039 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1656.1.1prot_P-wetherbeei_contig1656.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1656 188..1039 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1656.1.1

>prot_P-wetherbeei_contig1656.1.1 ID=prot_P-wetherbeei_contig1656.1.1|Name=mRNA_P-wetherbeei_contig1656.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=284bp
MVRLTARLAAAAAACLAAGPHAVAAFYLPGVAPRDFEPGERVEVKVNKLT
SVHTQLPMDYYSMPFCKPKGGVLMQAENLGEFLTGDRIENSPYKIYMRHD
QACKVLCQEAIDAKHVARLKEAIKREYRHNWIVDNLPAASIVDSAAYQTT
SYSQGFPVGYEENGHYYLYNHVRLLVDYHPMGDPENPSGRVVGFFAEPFS
VAHRFKAGAKWDGENAEDAPPLETCAADDLQRPIKPGAAPQEVAADAPLL
FTYDVVWQPSQTKWASRWDIYLTMDHAVPNKVR*
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mRNA from alignment at P-wetherbeei_contig1656:188..1039-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1656.1.1 ID=mRNA_P-wetherbeei_contig1656.1.1|Name=mRNA_P-wetherbeei_contig1656.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=852bp|location=Sequence derived from alignment at P-wetherbeei_contig1656:188..1039- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTCCGTCTCACGGCGCGCCTCGCGGCGGCGGCGGCGGCGTGCCTTGC CGCGGGCCCCCACGCCGTCGCCGCCTTCTACCTGCCGGGCGTCGCCCCAC GCGATTTCGAGCCCGGCGAACGCGTCGAGGTGAAGGTGAACAAGCTCACG TCGGTGCACACGCAGCTGCCGATGGACTACTATTCGATGCCGTTCTGCAA GCCCAAGGGCGGCGTCCTGATGCAGGCCGAGAATCTGGGCGAGTTTCTCA CGGGCGATCGAATCGAGAACTCGCCCTATAAGATCTACATGCGGCACGAC CAGGCCTGCAAGGTGCTCTGCCAGGAGGCGATCGACGCGAAGCACGTCGC CCGCCTGAAGGAGGCCATCAAGCGTGAGTACCGCCACAACTGGATCGTCG ACAACCTCCCCGCCGCGTCTATCGTGGACTCGGCCGCCTACCAGACAACG TCCTATTCGCAGGGGTTTCCTGTCGGTTACGAAGAAAACGGACATTATTA CCTCTACAACCACGTCCGGCTTCTCGTCGACTACCATCCGATGGGCGACC CCGAAAACCCGTCCGGGCGCGTCGTCGGATTCTTCGCGGAGCCATTCTCC GTGGCGCACCGCTTCAAGGCGGGCGCGAAGTGGGACGGCGAGAACGCGGA GGACGCGCCGCCGCTTGAGACTTGCGCAGCGGACGACCTGCAGCGCCCGA TCAAGCCTGGAGCGGCGCCGCAGGAGGTTGCGGCGGACGCGCCGCTGCTG TTCACATATGACGTGGTGTGGCAGCCGAGCCAGACAAAGTGGGCATCACG GTGGGACATTTACCTCACCATGGATCACGCTGTGCCCAACAAGGTGAGAT AG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1656:188..1039-

>mRNA_P-wetherbeei_contig1656.1.1 ID=mRNA_P-wetherbeei_contig1656.1.1|Name=mRNA_P-wetherbeei_contig1656.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=852bp|location=Sequence derived from alignment at P-wetherbeei_contig1656:188..1039- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTCCGTCTCACGGCGCGCCTCGCGGCGGCGGCGGCGGCGTGCCTTGC
CGCGGGCCCCCACGCCGTCGCCGCCTTCTACCTGCCGGGCGTCGCCCCAC
GCGATTTCGAGCCCGGCGAACGCGTCGAGGTGAAGGTGAACAAGCTCACG
TCGGTGCACACGCAGCTGCCGATGGACTACTATTCGATGCCGTTCTGCAA
GCCCAAGGGCGGCGTCCTGATGCAGGCCGAGAATCTGGGCGAGTTTCTCA
CGGGCGATCGAATCGAGAACTCGCCCTATAAGATCTACATGCGGCACGAC
CAGGCCTGCAAGGTGCTCTGCCAGGAGGCGATCGACGCGAAGCACGTCGC
CCGCCTGAAGGAGGCCATCAAGCGTGAGTACCGCCACAACTGGATCGTCG
ACAACCTCCCCGCCGCGTCTATCGTGGACTCGGCCGCCTACCAGACAACG
TCCTATTCGCAGGGGTTTCCTGTCGGTTACGAAGAAAACGGACATTATTA
CCTCTACAACCACGTCCGGCTTCTCGTCGACTACCATCCGATGGGCGACC
CCGAAAACCCGTCCGGGCGCGTCGTCGGATTCTTCGCGGAGCCATTCTCC
GTGGCGCACCGCTTCAAGGCGGGCGCGAAGTGGGACGGCGAGAACGCGGA
GGACGCGCCGCCGCTTGAGACTTGCGCAGCGGACGACCTGCAGCGCCCGA
TCAAGCCTGGAGCGGCGCCGCAGGAGGTTGCGGCGGACGCGCCGCTGCTG
TTCACATATGACGTGGTGTGGCAGCCGAGCCAGACAAAGTGGGCATCACG
GTGGGACATTTACCTCACCATGGATCACGCTGTGCCCAACAAGGTGAGAT
AG
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