mRNA_P-wetherbeei_contig16557.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16557.1.1
Unique NamemRNA_P-wetherbeei_contig16557.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16557.1.1 vs. uniprot
Match: A0A7Z9PXY2_9BACT (Flagellar motor switch protein FliM n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PXY2_9BACT)

HSP 1 Score: 246 bits (627), Expect = 4.710e-76
Identity = 140/345 (40.58%), Postives = 211/345 (61.16%), Query Frame = 1
Query:    1 MSQTEIDALLTGLAGKQVPPAPASKKSEPLGLSSRKSGGEPKLVGAQRGLLEQPQQNKISYRLYDFRRPDKLSKEHHRLLRGHFSLFWRRVANYLANLARCSVEVSLLEVDQSPYKDIFVSHRLPMLMCTFQLANEYQGMMKINLSQIFCLVDRLMGGGGVGATKARSVTDFERSLCTDIFGKLLSLYANIRRVDNFQ----VDNMETDERLLPRTLPADELMVRAIYDVRIGNHSGYLNLYLPMRSVTSILA--GDSGAMQSRRSASEDIPQSVSKLRLPLKVILGEANLAAKEVAGLKVGTVISLEQNSDKPLKVEVGSVPRFLAKPGLLGNQMAISIDSRWE 1017
            +SQ+EIDALL+G A               LG  +      P+   A     EQ  Q    YRLYDFRRPDKLSKE  R LRG F  F R  +NYLA L R SV+  L+EVDQ+ Y  +F SH +P L C F++ +   G++K+NLSQ++  +DR+MGG G G    R +TDFER L  D+  +LL L+A+  R  NF+    ++ ++TDER++PR+L  DE MVR +YD+R+G  +G +++Y P++ +  ++   G     Q++ +  + +P+ + +L LP+ V LG A L A+++A LK G V+ L+Q   +P++V+V  VPRF  +PG+LG +MA+ I+  ++
Sbjct:    4 LSQSEIDALLSGAA---------------LGSETESKELSPQFQAA----AEQSSQ----YRLYDFRRPDKLSKEQLRALRGCFGRFTRSASNYLAALTRSSVDAKLVEVDQTTYGQLFRSHGIPTLFCLFKMQDTMPGIIKLNLSQLYAALDRIMGGPGSGTILTRPLTDFERGLMGDLCQQLLILWASEFR--NFEPKIEIEILDTDERMIPRSLANDEFMVRGLYDLRLGPSNGQISIYTPLKDLNRLIGHKGQKDPAQAQIAGQKPLPKRLKQLPLPITVDLGSAWLNARQLAALKPGDVVQLQQEESQPVQVKVSGVPRFSGRPGVLGRKMAVQIEGPYK 323          
BLAST of mRNA_P-wetherbeei_contig16557.1.1 vs. uniprot
Match: A0A524QTY2_9BACT (Flagellar motor switch protein FliM n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A524QTY2_9BACT)

HSP 1 Score: 138 bits (347), Expect = 2.760e-34
Identity = 103/346 (29.77%), Postives = 174/346 (50.29%), Query Frame = 1
Query:    1 MSQTEIDALLTGLAGKQVPPAPASKKSEPLGLSSRKSGGEPKLVGAQRGLLEQPQQNKISYRLYDFRRPDKLSKEHHRLLRGHFSLFWRRVANYLANLARCSVEVSLLEVDQSPYKDIFVSHRLPMLMCTFQLAN-EYQGMMKINLSQIFCLVDRLMGGGGVGATKARSVTDFERSLCTDIFGK-LLSLYANIRRVDNF--QVDNMETDERLLPRTLPADELMVRAIYDVRIGNHSGYLNLYLP---MRSVTSILAGDSGAMQSRRSASED---IPQSVSKLRLPLKVILGEANLAAKEVAGLKVGTVISLEQNSDKPLKVEVGSVPRFLAKPGLLGNQMAISIDS 1008
            +SQ E+DALL+ ++      A A+  +EP        GG P          E+P+  + S ++YDFRRPD++SK+  R L+     + R  +  L +  R  VE+ L+ VDQ  Y +  +S   P  +  F +   E   + +IN S +F +VDRL GG G    + R +T+ ERS+   I  + L+ L      V  F  ++   ET+ + + +  P  E ++    +VR+ N SG +++  P   + SV   L+G+S     R S  E    I + +S     +  ++G+ NL  +++  L+ G V+ L++ +   L V+VG+ P+FL K G++GN   I + S
Sbjct:    5 LSQEEVDALLSAVSAGDFCGAEAAPAAEPAAAG----GGAP---------AEEPEVER-SVKIYDFRRPDRVSKDQMRTLQNLHEGYARLFSTTLTSYLRTLVEIELISVDQLTYSEFMMSISNPSCIYIFDIEPLEGSAIFEINPSLVFFIVDRLFGGQGAPTEQNRELTEIERSVLNKIIERALVDLKEVWEHVGIFSPKIQGYETNPQFV-QIAPPGETVILISLEVRLKNGSGLISICYPFMLLESVMGKLSGESWISSQRTSTQETRRLIEKEISSTNTRVAAVIGQTNLTVRDLLQLQPGDVVVLDKLASSDLVVQVGTKPKFLGKVGVVGNNKCIQVTS 335          
BLAST of mRNA_P-wetherbeei_contig16557.1.1 vs. uniprot
Match: A0A7G6E106_9FIRM (Flagellar motor switch protein FliM n=1 Tax=Thermanaerosceptrum fracticalcis TaxID=1712410 RepID=A0A7G6E106_9FIRM)

HSP 1 Score: 134 bits (338), Expect = 4.130e-33
Identity = 106/350 (30.29%), Postives = 175/350 (50.00%), Query Frame = 1
Query:    1 MSQTEIDALLTGLAGKQVPPAPASKKSEPLGLSSRKSGGEPKLVGAQRGLLEQPQQNKISYRLYDFRRPDKLSKEHHRLLRGHFSLFWRRVANYLANLARCSVEVSLLEVDQSPYKDIFVSHRLPMLMCTFQLAN-EYQGMMKINLSQIFCLVDRLMGGGGVGATKARSVTDFERSLCTDIFGKLLSLY----ANIRRVDNFQVDNMETDERLLPRTLPADELMVRAIYDVRIGNHSGYLNLYLPMRSVTSILAGDSGAMQSR-----------RSASEDIPQSVSKLRLPLKVILGEANLAAKEVAGLKVGTVISLEQNSDKPLKVEVGSVPRFLAKPGLLGNQMAISI 1002
            +SQ+EIDALL+ L   +V                         V A R      +QN    R+YDFRRP+K SK+    +   +  F R +   L+   R  V V +  V+Q  Y++   S   P ++  F LA  E + +++IN    F ++DRL GG G    K R +T+ E+++   I  K+LSL+    A++  VD F ++N+E + +      P  E++V    + +IG   G +N+ LP   + ++    SG + ++           + +S+ I + V K R+PL  +LG+ +L  KE+  L+VG VI LE+  D  +++  GS  +F  KPGLLG+++A+ I
Sbjct:    5 LSQSEIDALLSALQSGEVD------------------------VEAIR-----EEQNTKKIRVYDFRRPNKFSKDQLNTIEVIYDNFCRLLTTLLSGSLRTRVMVKVASVEQVTYEEFTRSIPNPTILNIFSLAPLEGKAILEINPVIGFSIIDRLFGGPGFSTIKGRPLTEIEKTVMERIVEKILSLFTETWASLIHVDAF-LENIEINPQFTQIVSPL-EMVVIITLNTQIGETEGLINICLPCLMLETL----SGKLNTKFWFTTNIKAQHQDSSKFIQKVVEKARIPLTAVLGKTSLTVKELLELQVGDVIDLERKKDSEIEIYAGSRLKFYGKPGLLGSKLAVQI 319          
BLAST of mRNA_P-wetherbeei_contig16557.1.1 vs. uniprot
Match: A0A399X3Q4_9BACT (Flagellar motor switch protein FliM n=5 Tax=Armatimonadetes TaxID=67819 RepID=A0A399X3Q4_9BACT)

HSP 1 Score: 134 bits (337), Expect = 6.530e-33
Identity = 102/347 (29.39%), Postives = 181/347 (52.16%), Query Frame = 1
Query:    1 MSQTEIDALLTGLAGKQVPPAPASKKSEPLGLSSRKSGGEPKLVGAQRGLLEQPQQNKISYRLYDFRRPDKLSKEHHRLLRGHFSLFWRRVANYLANLARCSVEVSLLEVDQSPYKDIF--VSHRLPMLMCTFQLANEYQGMMKINLSQIFCLVDRLMGGGGVGATKARSVTDFERSLCTDI----FGKLLSLYANIRRVDNFQVDNMETDERLLPRTLPADELMVRAIYDVRIGNHSGYLNL---YLPMRSVTSILAGD----SGAMQSRRSASEDIPQSVSKLRLPLKVILGEANLAAKEVAGLKVGTVISLEQNSDKPLKVEVGSVPRFLAKPGLLGNQMAISI 1002
            +SQ EI +LL   A +     PA +++EP   +SR SG            L    +  I+Y LYDFRRPDK SKE  R L+     F R   + L+   R  V + L+ ++Q P+++    +S  +  ++    L+   Q ++++     F +VDR++GG G   +++  +TD ER L   +    F  L S +  +   D   ++ MET  + + +  P ++++V  +++VRIG+  G ++L   YL ++ +T+ L+      +G  ++  S    I   +S  R+   + LGEA +  +EV GLKVG ++ L+Q +  P+ + VG+VP+F  +P L G+++  +I
Sbjct:    5 LSQEEIASLLNA-AEQASDDLPAPQQAEPN--ASRASG------------LRSRTRAPIAYELYDFRRPDKFSKEQLRTLQMLHETFARLAGSSLSAYLRTPVNIDLISIEQVPFEEYLRSISQSVFNILSLPPLSG--QAVLELEFGIAFTMVDRMLGGPGRAISRS-VLTDVERPLVRQLVERLFAGLKSAWEGVVVADP-TIEGMETSAQFV-QIAPPNDIVVTILFEVRIGDQRGAMSLCIPYLLLKPITTKLSAQKWFATGPRRANHSTRNQITSHISSARVECAIRLGEAKMRTREVLGLKVGDIVRLDQGATDPVCLYVGNVPKFEGRPALQGSKLVFAI 331          
BLAST of mRNA_P-wetherbeei_contig16557.1.1 vs. uniprot
Match: A0A357NCM4_9FIRM (Flagellar motor switch protein FliM n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A357NCM4_9FIRM)

HSP 1 Score: 134 bits (336), Expect = 8.200e-33
Identity = 108/347 (31.12%), Postives = 179/347 (51.59%), Query Frame = 1
Query:    1 MSQTEIDALLTGLAGKQVPPAPASKKSEPLGLSSRKSGGEPKLVGAQRGLLEQPQQNKISYRLYDFRRPDKLSKEHHRLLRGHFSLFWRRVANYLANLARCSVEVSLLEVDQSPYKDIFVSHRLPMLMCTFQLAN-EYQGMMKINLSQIFCLVDRLMGGGGVGATKARSVTDFERSLCTDIFGKLLSLYANI-RRVDNFQ--VDNMETDERLLPRTLPADELMVRAIYDVRIGNHSGYLNL---YLPMRSVTSILAGDSGAMQSRRSASEDIPQS----VSKLRLPLKVILGEANLAAKEVAGLKVGTVISLEQNSDKPLKVEVGSVPRFLAKPGLLGNQMAISIDS 1008
            +SQ EIDALL+ L                       S GE   V A   + E+ QQ KI  ++YDFRRPDK SK+  R L      F R +  YL+   R  V+VS+  VDQ  Y++   S   P ++   ++   +   +++IN S +F  +DRL GG G  A+KAR +TD E ++   + G+ L   A   ++V   +  VD +ET+ +   + +P ++++V      ++G   G++NL   YL +  + S L+       + R+AS +  QS    V K+ +P+ V LG+  +  +E+  L+ G V+ L++  D+ L+V +GS  +F  K G +G+++AI + S
Sbjct:    6 LSQDEIDALLSAL-----------------------STGE---VDADE-IKEEQQQRKI--KVYDFRRPDKFSKDQIRTLYMLHENFARLLNTYLSAQLRAMVQVSVASVDQLTYEEFIRSLPNPSVISVLEMQPLKGNAILEINPSVVFATIDRLFGGSGQTASKARPLTDIEENIVRRVLGRTLESLAEAWKQVVPLKPVVDVIETNPQF-SQIVPPNDMVVLITLQAKVGQGEGFINLCIPYLVLEPIMSKLSTTYWVAGTGRNASTEHIQSLQRRVEKIMVPVIVELGKTTVNLQELLDLRRGDVLQLDRKVDEDLQVMIGSHKKFFCKAGAMGSKLAIQVSS 322          
BLAST of mRNA_P-wetherbeei_contig16557.1.1 vs. uniprot
Match: A0A7V1Q3Q3_9BACT (Flagellar motor switch protein FliM n=2 Tax=Bacteria TaxID=2 RepID=A0A7V1Q3Q3_9BACT)

HSP 1 Score: 134 bits (336), Expect = 1.260e-32
Identity = 97/348 (27.87%), Postives = 180/348 (51.72%), Query Frame = 1
Query:    1 MSQTEIDALLTGLAGKQVPPAPASKKSEPLGLSSRKSGGEPKLVGAQRGLLEQPQQNKISYRLYDFRRPDKLSKEHHRLLRGHFSLFWRRVANYLANLARCSVEVSLLEVDQSPYKDIFVSHRLPMLMCTFQLAN-EYQGMMKINLSQIFCLVDRLMGGGGVGATKARS-VTDFERSLCTDI----FGKLLSLYANIRRVDNFQVDNMETDERLLPRTLPADELMVRAIYDVRIGNHSGYLNL---YLPMRSVTSILAGDSGAMQSRRSASED---IPQSVSKLRLPLKVILGEANLAAKEVAGLKVGTVISLEQNSDKPLKVEVGSVPRFLAKPGLLGNQMAISIDS 1008
            +SQ EI+ALL  L+G +    P++  +         SG   ++ G  +     P    I+Y +YDFRRPDK SK+  R ++     F R  ++ L+   R  V + L+ V+Q PY D ++      L+  F +     Q +++I    +  ++DRL+GG G    + ++ +TD ER L  ++     G L + +  I      + + MET  + + + +P ++++V  ++++R+G   G ++L   YL ++ + S L+       S+R+ S+    I Q + + R+PL  +LG   L  +++  LK G V+ L + + +P+ + VG+  +F A+PGL G Q+ + I+S
Sbjct:    5 LSQEEIEALLASLSGSEEVAQPSTPSA---------SGVAAQVPGTGKADRRMP----IAYEVYDFRRPDKFSKDQLRTMQMLHETFARLFSSTLSAYLRAPVHIDLISVEQIPY-DEYIRAITSSLINIFSMQPLSGQALLEIEFDVVISMIDRLLGGPGTVVKRPQAALTDIERPLVENVVDRALGALRTAWEGIVSFTPIR-EGMETSAQFV-QIVPPNDIVVSILFEIRVGETHGAMSLCIPYLLLKPILSKLSAQRWFSGSKRAPSQHAVLIAQQLQQTRVPLVAVLGSTRLMLRQILDLKEGDVVLLTRRTSEPIDIMVGNRVKFRARPGLRGKQVVVQIES 336          
BLAST of mRNA_P-wetherbeei_contig16557.1.1 vs. uniprot
Match: A0A7V4TH40_9BACT (Flagellar motor switch protein FliM n=3 Tax=Candidatus Caldatribacterium TaxID=1454725 RepID=A0A7V4TH40_9BACT)

HSP 1 Score: 132 bits (333), Expect = 2.050e-32
Identity = 97/352 (27.56%), Postives = 177/352 (50.28%), Query Frame = 1
Query:    1 MSQTEIDALLTGLAGKQVPPAPASKKSEPLGLSSRKSGGEPKLVGAQRGLLEQPQQNKISYRLYDFRRPDKLSKEHHRLLRGHFSLFWRRVANYLANLARCSVEVSLLEVDQSPYKDIFVSHRLPMLMCTFQLAN-EYQGMMKINLSQIFCLVDRLMGGGGVGATKARSVTDFERSLCTDIFGKLLSL----YANIRRVDNFQVDNMETDERLLPRTLPADELMVRAIYDVRIGNHSGYLNLYLPMRSVTSILAGDSGAM--QSRRS----ASEDIPQSVSKLRLPLKVILGEANLAAKEVAGLKVGTVISLEQNSDKPLKVEVGSVPRFLAKPGLLGNQMAISIDSRWEGE 1023
            +SQ EIDALL  L+          ++++P                            ++  ++YDFRRP+K SK+  R     FS F R  A  LA   R  +++ L+ VDQ  Y +   S   P  +C F +   E + +++++L  +F ++DRL+GG G      R +T+ E  +  ++  +L+S     +ANI ++D  +V+N+E++   + + +  ++++V   ++V +G  SG + + +P   V  I    S ++   SR+S    A E+I   + ++RLP+ V LGEA +  +E+  L+VG V+ L++   +PL++ VG   +    PG  G ++A+ +    E E
Sbjct:    5 LSQEEIDALLRALSSGAAEAEKIKEEAKP----------------------------EVRLKVYDFRRPEKFSKDQIRTFHMIFSTFARLGATNLAGFLRSRLQIDLVSVDQLTYDEFVRSVPSPTFVCVFSIPPLEGRCILQMSLDVVFSMIDRLLGGVGAPPGNLRPLTEIENRIMLEVVERLMSALKEAWANIYQIDP-RVENLESNLEFV-QVVSGNDMVVLFSFEVEVGERSGVMMVCIPYIVVEPIAQKLSASLWFASRKSYDARAQENIKHWLQRVRLPVWVKLGEARIRLRELLALEVGDVLLLDRRVHEPLEIYVGKRVKMRGLPGRSGRRLAVKVTEYVEEE 326          
BLAST of mRNA_P-wetherbeei_contig16557.1.1 vs. uniprot
Match: W6SG68_9CLOT (Flagellar motor switch protein FliM n=2 Tax=Clostridium bornimense TaxID=1216932 RepID=W6SG68_9CLOT)

HSP 1 Score: 132 bits (333), Expect = 2.180e-32
Identity = 98/349 (28.08%), Postives = 173/349 (49.57%), Query Frame = 1
Query:    1 MSQTEIDALLTGLAGKQVPPAPASKKSEPLGLSSRKSGGEPKLVGAQRGLLEQPQQNKISYRLYDFRRPDKLSKEHHRLLRGHFSLFWRRVANYLANLARCSVEVSLLEVDQSPYKDIFVSHRLPMLMCTFQLANEYQGMMKINLSQIFC--LVDRLMGGGGVGATKARSVTDFERSLCTDIFGKLLS----LYANIRRVDNFQVDNMETDERLLPRTLPADELMVRAIYDVRIGNHSGYLNLYLPMRSVTSILAG-------DSGAMQSRRSASEDIPQSVSKLRLPLKVILGEANLAAKEVAGLKVGTVISLEQNSDKPLKVEVGSVPRFLAKPGLLGNQMAISIDS 1008
            +SQ+EIDALL  L   ++ P   + + E                             K   +LYDFR P K SK+H R L   +  + R +ANYLA   R +V+V+L  ++Q+ Y++   S   P ++  F+L     G +    +Q F   ++D L+GG G G  K RS++D +R++   I   L++     ++++  V+  + + +ET+  L  +TL   E +V     V IG +S +LN+ +P  SV  IL                +    E I ++++K+ +P+ V+LG++ ++  +   +  G VI+L+   D PLKV V +   ++AKPG++G ++ + + S
Sbjct:    5 LSQSEIDALLLALDSGELKPEEITNEEE-----------------------------KQKVKLYDFRSPQKFSKDHIRTLELIYDNYSRIIANYLAAQVRTTVKVNLEYIEQTTYEEFMHSISNPTILNLFKL-QPLSGTLLFETNQQFTYQIIDILLGGKGEGVYKTRSISDIDRNIIMKINQALVAHLKLAWSDVLSVEP-EFEGIETNPAL-NQTLAPHEPVVLITLSVEIGKNSTFLNMCIPYLSVEKILDKLVFSYWYQESDENDKAETQEKIVENLNKVEVPINVLLGKSQISVHDFLSVMTGDVITLDTKCDDPLKVLVDNKVHYIAKPGVVGKKLGVQVIS 321          
BLAST of mRNA_P-wetherbeei_contig16557.1.1 vs. uniprot
Match: A0A7G9WCL5_9FIRM (Flagellar motor switch protein FliM n=1 Tax=Alkalicella caledoniensis TaxID=2731377 RepID=A0A7G9WCL5_9FIRM)

HSP 1 Score: 132 bits (331), Expect = 4.240e-32
Identity = 106/352 (30.11%), Postives = 178/352 (50.57%), Query Frame = 1
Query:    1 MSQTEIDALLTGLAGKQVPPAPASKKSEPLGLSSRKSGGEPKLVGAQRGLLEQPQQNKISYRLYDFRRPDKLSKEHHRLLRGHFSLFWRRVANYLANLARCSVEVSLLEVDQSPYKDIFVSHRLPMLMCTFQLANEY-QGMMKINLSQIFCLVDRLMGGGGVGATKARSVTDFERSLCTDIFGKLL-SLYANIRRVDNFQVDNM--ETDERLLPRTLPADELMVRAIYDVRIGNHSGYLNLYLPMRSVTSILAGDSGAMQ-SRRSASEDIPQS------VSKLRLPLKVILGEANLAAKEVAGLKVGTVISLEQNSDKPLKVEVGSVPRFLAKPGLLGNQMAISIDSRWEGE 1023
            +SQ+EIDALL+ L+  ++      K+ E                             K   R+YDFRRP+K SK+  R L+     F R   +YL+   R  V+VS+  VDQ+ Y++   S   P ++  F L +E  Q +++IN +  F ++DRL+GG G    + R +++ E+ +   +  KLL +L      V N +   M  ET+ + L    P + + V  +  V +G+  G++NL +P  S+ +++   S     S++S  ++ P        + +  LP+ V LG+AN++ K++  L+VG VI+LE+ + + L V V    +FL  PGL+ N++AI I    EGE
Sbjct:    5 LSQSEIDALLSALSTGEIDVEEVKKEEE-----------------------------KSKVRVYDFRRPNKFSKDQTRTLQMIHENFARLTTSYLSASLRNVVQVSVASVDQTTYEEFIRSVPNPTVINLFSLNSEAGQALLEINPNISFAIIDRLLGGPGGTLKEGRPLSEIEQRIIKMVTDKLLLTLNDAWFNVCNLKARTMKLETNPQFLQIVSPNETVAV-IVLKVILGDAEGFMNLCIPFISLENLIDNLSAHFWFSQQSTEKEAPNQQYVEAGLKRTPLPVSVELGKANVSVKDMLELQVGDVITLEKATSEHLAVYVKEKLKFLGSPGLIKNKLAIQITETIEGE 326          
BLAST of mRNA_P-wetherbeei_contig16557.1.1 vs. uniprot
Match: A0A2N1PSQ8_9BACT (Flagellar motor switch protein FliM n=1 Tax=Candidatus Wallbacteria bacterium HGW-Wallbacteria-1 TaxID=2013854 RepID=A0A2N1PSQ8_9BACT)

HSP 1 Score: 130 bits (327), Expect = 1.600e-31
Identity = 95/346 (27.46%), Postives = 172/346 (49.71%), Query Frame = 1
Query:    1 MSQTEIDALLTGLAGKQVPPAPASKKSEPLGLSSRKSGGEPKLVGAQRGLLEQPQQNKISYRLYDFRRPDKLSKEHHRLLRGHFSLFWRRVANYLANLARCSVEVSLLEVDQSPYKDIFVSHRLPMLMCTFQLAN-EYQGMMKINLSQIFCLVDRLMGGGGVGATKARSVTDFERSLCTDIFGKLLS----LYANIRRVDNFQVDNMETDERLLPRTLPADELMVRAIYDVRIGNHSGYLNLYLP---MRSVTSILAGDSGAMQSRRSASED----IPQSVSKLRLPLKVILGEANLAAKEVAGLKVGTVISLEQNSDKPLKVEVGSVPRFLAKPGLLGNQMAISI 1002
            +SQ EID+LL+ +                       S GE K     + + E  +  KI  ++YDF+RPDK SK+  R+L      F R    YL  L R  V + ++ +D+  Y++   S   P ++  F+L   E   +M+INL  +F ++DRL GG G G  K R +TD E ++   +  +LLS     +A++  + N +++ +E++ +   + +P +++++   ++ RI    G +N+ +P   +  +   L         +R  S++    I Q VS   + L   LG A +   ++ GL++G VI+L+Q    P+ V+V +  +F  +PG++G +M + I
Sbjct:    5 LSQNEIDSLLSAI-----------------------SAGELKA----KEIKEDTKHKKI--KIYDFKRPDKFSKDQIRMLNNIHETFARFANTYLTTLLRTMVNIEVVSIDEITYEEFIRSIANPTVISIFELGGLEGTAVMEINLGVVFTIIDRLFGGSGKGIEKIRPLTDIETTVMRRVILRLLSNFKEAWASVVEL-NPKLEFIESNPQFT-QIVPPNDMVLLVTFETRIAESEGIMNICIPYIVLEPIVGKLQASFWYSTVKREISDETREAITQKVSDAYIDLVAELGHARITMSDILGLELGDVITLDQTVHDPILVKVQNQYKFFGRPGVVGKKMGVKI 319          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16557.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Z9PXY2_9BACT4.710e-7640.58Flagellar motor switch protein FliM n=1 Tax=Phycis... [more]
A0A524QTY2_9BACT2.760e-3429.77Flagellar motor switch protein FliM n=1 Tax=Gemmat... [more]
A0A7G6E106_9FIRM4.130e-3330.29Flagellar motor switch protein FliM n=1 Tax=Therma... [more]
A0A399X3Q4_9BACT6.530e-3329.39Flagellar motor switch protein FliM n=5 Tax=Armati... [more]
A0A357NCM4_9FIRM8.200e-3331.12Flagellar motor switch protein FliM n=1 Tax=Firmic... [more]
A0A7V1Q3Q3_9BACT1.260e-3227.87Flagellar motor switch protein FliM n=2 Tax=Bacter... [more]
A0A7V4TH40_9BACT2.050e-3227.56Flagellar motor switch protein FliM n=3 Tax=Candid... [more]
W6SG68_9CLOT2.180e-3228.08Flagellar motor switch protein FliM n=2 Tax=Clostr... [more]
A0A7G9WCL5_9FIRM4.240e-3230.11Flagellar motor switch protein FliM n=1 Tax=Alkali... [more]
A0A2N1PSQ8_9BACT1.600e-3127.46Flagellar motor switch protein FliM n=1 Tax=Candid... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16557contigP-wetherbeei_contig16557:282..1307 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1449126.JQKL01000001_gene1338
Preferred namefliM
PFAMsFliM,FliMN_C
Model size1026
Max annot lvl186801|Clostridia
KEGG koko:K02416
KEGG Pathwayko02030,ko02040,map02030,map02040
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.14e-34
EggNOG OGsCOG1868@1|root,COG1868@2|Bacteria,1TPTM@1239|Firmicutes,24AGV@186801|Clostridia,267NW@186813|unclassified Clostridiales
DescriptionFlagellar motor switch protein FliM
Cds size1026
COG categoryN
BRITEko00000,ko00001,ko02035
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186090.4238122-CDS-P-wetherbeei_contig16557:281..13071683186090.4238122-CDS-P-wetherbeei_contig16557:281..1307Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16557 282..1307 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16557.1.1prot_P-wetherbeei_contig16557.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16557 282..1307 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16557.1.1

>prot_P-wetherbeei_contig16557.1.1 ID=prot_P-wetherbeei_contig16557.1.1|Name=mRNA_P-wetherbeei_contig16557.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=342bp
MSQTEIDALLTGLAGKQVPPAPASKKSEPLGLSSRKSGGEPKLVGAQRGL
LEQPQQNKISYRLYDFRRPDKLSKEHHRLLRGHFSLFWRRVANYLANLAR
CSVEVSLLEVDQSPYKDIFVSHRLPMLMCTFQLANEYQGMMKINLSQIFC
LVDRLMGGGGVGATKARSVTDFERSLCTDIFGKLLSLYANIRRVDNFQVD
NMETDERLLPRTLPADELMVRAIYDVRIGNHSGYLNLYLPMRSVTSILAG
DSGAMQSRRSASEDIPQSVSKLRLPLKVILGEANLAAKEVAGLKVGTVIS
LEQNSDKPLKVEVGSVPRFLAKPGLLGNQMAISIDSRWEGE*
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mRNA from alignment at P-wetherbeei_contig16557:282..1307+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16557.1.1 ID=mRNA_P-wetherbeei_contig16557.1.1|Name=mRNA_P-wetherbeei_contig16557.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1026bp|location=Sequence derived from alignment at P-wetherbeei_contig16557:282..1307+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTCAGACAGAGATTGACGCCCTTCTCACGGGTTTGGCCGGGAAGCA AGTGCCTCCAGCTCCCGCCTCGAAAAAATCTGAACCATTAGGGCTCTCTT CCCGCAAATCGGGAGGAGAGCCTAAATTGGTTGGAGCGCAACGCGGCCTG CTCGAGCAGCCGCAGCAGAATAAAATCAGCTACCGCCTCTACGATTTCAG GCGGCCTGATAAGTTGTCAAAAGAACATCATCGCCTCTTGCGTGGGCACT TTAGCCTTTTCTGGCGTCGCGTAGCCAACTACCTGGCCAACCTGGCCCGC TGCAGTGTCGAAGTTTCACTCCTAGAGGTTGATCAGAGCCCCTACAAGGA CATCTTTGTCAGTCACCGGCTCCCCATGTTGATGTGTACTTTTCAGTTGG CCAATGAATACCAAGGGATGATGAAAATCAACCTCAGCCAGATTTTTTGC CTGGTCGACCGCTTGATGGGCGGAGGCGGAGTAGGCGCAACCAAAGCTCG CAGCGTGACTGATTTTGAGCGCAGCCTTTGCACGGATATCTTCGGCAAGC TTCTTTCCCTTTACGCCAATATTCGTCGGGTAGATAATTTCCAGGTCGAC AATATGGAGACCGACGAGCGCCTCTTGCCTAGAACTTTACCCGCCGACGA GTTGATGGTTCGGGCCATCTACGATGTTCGTATCGGAAACCATAGCGGCT ATCTCAATCTTTACTTGCCGATGCGCTCCGTGACCTCGATTTTAGCGGGG GATAGCGGGGCTATGCAGAGTCGTAGGAGCGCTTCGGAAGACATTCCCCA GTCCGTCTCCAAGCTGCGTTTGCCTTTGAAAGTTATCCTTGGAGAGGCAA ATCTGGCTGCCAAGGAAGTTGCGGGCCTCAAGGTAGGCACCGTAATCTCA TTAGAACAAAATAGCGACAAGCCGCTCAAGGTTGAAGTTGGTTCGGTGCC AAGATTTCTCGCTAAGCCGGGACTTCTCGGTAATCAGATGGCGATCTCGA TCGATTCACGCTGGGAGGGTGAGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16557:282..1307+

>mRNA_P-wetherbeei_contig16557.1.1 ID=mRNA_P-wetherbeei_contig16557.1.1|Name=mRNA_P-wetherbeei_contig16557.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1026bp|location=Sequence derived from alignment at P-wetherbeei_contig16557:282..1307+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTCAGACAGAGATTGACGCCCTTCTCACGGGTTTGGCCGGGAAGCA
AGTGCCTCCAGCTCCCGCCTCGAAAAAATCTGAACCATTAGGGCTCTCTT
CCCGCAAATCGGGAGGAGAGCCTAAATTGGTTGGAGCGCAACGCGGCCTG
CTCGAGCAGCCGCAGCAGAATAAAATCAGCTACCGCCTCTACGATTTCAG
GCGGCCTGATAAGTTGTCAAAAGAACATCATCGCCTCTTGCGTGGGCACT
TTAGCCTTTTCTGGCGTCGCGTAGCCAACTACCTGGCCAACCTGGCCCGC
TGCAGTGTCGAAGTTTCACTCCTAGAGGTTGATCAGAGCCCCTACAAGGA
CATCTTTGTCAGTCACCGGCTCCCCATGTTGATGTGTACTTTTCAGTTGG
CCAATGAATACCAAGGGATGATGAAAATCAACCTCAGCCAGATTTTTTGC
CTGGTCGACCGCTTGATGGGCGGAGGCGGAGTAGGCGCAACCAAAGCTCG
CAGCGTGACTGATTTTGAGCGCAGCCTTTGCACGGATATCTTCGGCAAGC
TTCTTTCCCTTTACGCCAATATTCGTCGGGTAGATAATTTCCAGGTCGAC
AATATGGAGACCGACGAGCGCCTCTTGCCTAGAACTTTACCCGCCGACGA
GTTGATGGTTCGGGCCATCTACGATGTTCGTATCGGAAACCATAGCGGCT
ATCTCAATCTTTACTTGCCGATGCGCTCCGTGACCTCGATTTTAGCGGGG
GATAGCGGGGCTATGCAGAGTCGTAGGAGCGCTTCGGAAGACATTCCCCA
GTCCGTCTCCAAGCTGCGTTTGCCTTTGAAAGTTATCCTTGGAGAGGCAA
ATCTGGCTGCCAAGGAAGTTGCGGGCCTCAAGGTAGGCACCGTAATCTCA
TTAGAACAAAATAGCGACAAGCCGCTCAAGGTTGAAGTTGGTTCGGTGCC
AAGATTTCTCGCTAAGCCGGGACTTCTCGGTAATCAGATGGCGATCTCGA
TCGATTCACGCTGGGAGGGTGAGTAG
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