mRNA_P-wetherbeei_contig16545.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16545.2.1 vs. uniprot
Match: A0A7C4TP44_9HYPH (Inner membrane-spanning protein YciB n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TP44_9HYPH) HSP 1 Score: 256 bits (653), Expect = 3.270e-84 Identity = 124/179 (69.27%), Postives = 151/179 (84.36%), Query Frame = 1
Query: 4 AELSPKQFMKMLLEIGPIAVFFIVNARMGIFWGTGIFMLATLIALVLSWRLLGKVPVMPLVSGVFVLVFGGLTLLLQDELFIKMKPTIVNAIFAAILLGGLAWGQTFTKILFGEVFKLSEEGWRVLTIRWALFFLFLAVVNEAVWRTQTTDFWISFKVWGIMPLTMIFAIAQIGLIKRY 540
AE+ Q +K+LLE+GP+ VFF+VNA GIFWGTG FMLAT +AL S LLG+VP+MPLVSGVFVLVFGGLTLLLQDELFIKMKPTIVN +FA+IL GGL +G + K+LFGEVF+L E GWRVLT RWA FF+ LA++NE VWR+ +TDFW++FK +GIMPLT+ FA++QIGL+KRY
Sbjct: 19 AEVGNNQLLKLLLEMGPLGVFFLVNAYKGIFWGTGAFMLATAVALTTSRALLGRVPIMPLVSGVFVLVFGGLTLLLQDELFIKMKPTIVNTLFASILFGGLWFGHSLLKVLFGEVFRLREPGWRVLTFRWACFFVALALLNEVVWRSFSTDFWVAFKAFGIMPLTLAFALSQIGLLKRY 197
BLAST of mRNA_P-wetherbeei_contig16545.2.1 vs. uniprot
Match: A0A2S5MDD6_HYPSQ (Inner membrane-spanning protein YciB n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5MDD6_HYPSQ) HSP 1 Score: 246 bits (629), Expect = 1.240e-80 Identity = 114/180 (63.33%), Postives = 153/180 (85.00%), Query Frame = 1
Query: 7 ELSPKQFMKMLLEIGPIAVFFIVNARMGIFWGTGIFMLATLIALVLSWRLLGKVPVMPLVSGVFVLVFGGLTLLLQDELFIKMKPTIVNAIFAAILLGGLAWGQTFTKILFGEVFKLSEEGWRVLTIRWALFFLFLAVVNEAVWRTQTTDFWISFKVWGIMPLTMIFAIAQIGLIKRYER 546
E KQ +K+ +E+GP+ VFFI N+R+GIFWGTGIFM+AT+I+L++S +LG++P MPLVSG FV+VFGGLTL LQD+LFIK+KPTIVN +FA ILLGGL G++ K++F +V +L+EEGW+ LT+RW LFF+FLA++NE +WR +TDFW+SFKV+GIMPLT FA+AQIGL+KR+E+
Sbjct: 18 EFDRKQLIKLGVELGPLVVFFIANSRLGIFWGTGIFMVATIISLLVSRAVLGRIPTMPLVSGFFVVVFGGLTLWLQDDLFIKLKPTIVNVLFATILLGGLVAGRSLLKVVFDDVMRLTEEGWKQLTLRWGLFFVFLAILNEIIWRNFSTDFWVSFKVFGIMPLTFAFALAQIGLLKRHEQ 197
BLAST of mRNA_P-wetherbeei_contig16545.2.1 vs. uniprot
Match: UPI000930C109 (septation protein A n=1 Tax=Hyphomicrobium sp. NDB2Meth4 TaxID=1892846 RepID=UPI000930C109) HSP 1 Score: 244 bits (624), Expect = 6.240e-80 Identity = 116/181 (64.09%), Postives = 149/181 (82.32%), Query Frame = 1
Query: 1 EAELSPKQFMKMLLEIGPIAVFFIVNARMGIFWGTGIFMLATLIALVLSWRLLGKVPVMPLVSGVFVLVFGGLTLLLQDELFIKMKPTIVNAIFAAILLGGLAWGQTFTKILFGEVFKLSEEGWRVLTIRWALFFLFLAVVNEAVWRTQTTDFWISFKVWGIMPLTMIFAIAQIGLIKRYE 543
EA + Q +K+ +E+GP+ VFFIVNAR GIFWGTG+FM+AT+ AL+ S + G+VPVMPL+SG V+VFGGLTL LQD+ FIK+KPTIVNA+FAA L GGL G + K++FGEVF+L+E+GWR LT+RWA FF FLA++NE VWRT +TD W+SFKV+ IMPLTMIFA+AQIGL++ +E
Sbjct: 10 EASATRAQLLKLAVEVGPLVVFFIVNARAGIFWGTGVFMVATIAALIASRFMFGRVPVMPLISGACVIVFGGLTLWLQDDHFIKLKPTIVNALFAAALFGGLLAGHSLLKVVFGEVFRLNEDGWRKLTLRWAFFFAFLAILNEVVWRTVSTDAWVSFKVFAIMPLTMIFALAQIGLLRAHE 190
BLAST of mRNA_P-wetherbeei_contig16545.2.1 vs. uniprot
Match: A0A7Y4XJ48_HYPSQ (Inner membrane-spanning protein YciB n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y4XJ48_HYPSQ) HSP 1 Score: 244 bits (623), Expect = 1.370e-79 Identity = 124/190 (65.26%), Postives = 153/190 (80.53%), Query Frame = 1
Query: 1 EAELSPKQFMKMLLEIGPIAVFFIVNARMG---------IFWGTGIFMLATLIALVLSWRLLGKVPVMPLVSGVFVLVFGGLTLLLQDELFIKMKPTIVNAIFAAILLGGLAWGQTFTKILFGEVFKLSEEGWRVLTIRWALFFLFLAVVNEAVWRTQTTDFWISFKVWGIMPLTMIFAIAQIGLIKRYE 543
E E KQ +K+L+E+GP+ VFF+VN + G IF+GTG FM+ATLIAL+LS +LLG++P MPLV+G FV VFGGLTL LQD+ FIK+KPTIVN +FAAIL GLA G+T KI+FG+VFKL+E GWR LTIRW LFF+FLAV+NE VWR +TDFW+SFKV+GIMPLTM FAIAQ+GL+KR+E
Sbjct: 16 EPEFDSKQAIKLLVELGPLLVFFLVNWQAGKFLADPKQAIFYGTGTFMVATLIALLLSKKLLGRIPTMPLVTGFFVFVFGGLTLWLQDDQFIKLKPTIVNGLFAAILFAGLASGRTLLKIVFGDVFKLTEAGWRQLTIRWGLFFVFLAVLNEIVWRGFSTDFWVSFKVFGIMPLTMAFAIAQVGLLKRHE 205
BLAST of mRNA_P-wetherbeei_contig16545.2.1 vs. uniprot
Match: A0A6I3KIW7_9HYPH (Inner membrane-spanning protein YciB n=2 Tax=Hyphomicrobium TaxID=81 RepID=A0A6I3KIW7_9HYPH) HSP 1 Score: 242 bits (617), Expect = 7.490e-79 Identity = 114/180 (63.33%), Postives = 149/180 (82.78%), Query Frame = 1
Query: 4 AELSPKQFMKMLLEIGPIAVFFIVNARMGIFWGTGIFMLATLIALVLSWRLLGKVPVMPLVSGVFVLVFGGLTLLLQDELFIKMKPTIVNAIFAAILLGGLAWGQTFTKILFGEVFKLSEEGWRVLTIRWALFFLFLAVVNEAVWRTQTTDFWISFKVWGIMPLTMIFAIAQIGLIKRYE 543
A + Q +K+ +EIGP+ VFFIVNAR GIFWGTG+FM+AT+++L+ S + G++PVMPL+SG V+VFGGLTL LQD+ FIK+KPTIVNA+FAA L GGL G + K++FGEVF+L+E+GWR LT+RWA FF FLAV+NE VWRT +TD W+SFKV+ IMPLTM+FA++QIGL+K +E
Sbjct: 12 ASATQAQLLKLAVEIGPLVVFFIVNARAGIFWGTGVFMVATIVSLIASRFMFGRIPVMPLISGACVVVFGGLTLWLQDDHFIKIKPTIVNALFAAALFGGLFAGHSLLKVVFGEVFRLNEDGWRKLTLRWACFFTFLAVLNEVVWRTVSTDTWVSFKVFAIMPLTMVFALSQIGLLKAHE 191
BLAST of mRNA_P-wetherbeei_contig16545.2.1 vs. uniprot
Match: UPI0009303354 (septation protein A n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI0009303354) HSP 1 Score: 241 bits (615), Expect = 1.610e-78 Identity = 114/178 (64.04%), Postives = 148/178 (83.15%), Query Frame = 1
Query: 7 ELSPKQFMKMLLEIGPIAVFFIVNARMGIFWGTGIFMLATLIALVLSWRLLGKVPVMPLVSGVFVLVFGGLTLLLQDELFIKMKPTIVNAIFAAILLGGLAWGQTFTKILFGEVFKLSEEGWRVLTIRWALFFLFLAVVNEAVWRTQTTDFWISFKVWGIMPLTMIFAIAQIGLIKRY 540
E +Q +K ++E+GP+ VFF+VNAR GIFWGTG+F+ ATL++LV S L G+VPVMPLVS V+VFGGLTLLLQDELFIK+KPTIVN+IFA++L GGL +G++ LFG+VF L+EEGWR LT RWA FF+FLA++NE WR TTD W++FKV+GIMP+TM+FAI+Q+GL++RY
Sbjct: 12 ESGSQQLLKFVVELGPLVVFFLVNARAGIFWGTGLFIAATLVSLVASRLLFGRVPVMPLVSAFVVIVFGGLTLLLQDELFIKLKPTIVNSIFASVLFGGLYFGKSLLSYLFGDVFSLTEEGWRKLTFRWACFFVFLALLNEFAWRLLTTDQWVTFKVFGIMPITMVFAISQVGLLQRY 189
BLAST of mRNA_P-wetherbeei_contig16545.2.1 vs. uniprot
Match: A0A433B044_HYPSQ (Inner membrane-spanning protein YciB n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A433B044_HYPSQ) HSP 1 Score: 240 bits (613), Expect = 3.970e-78 Identity = 115/181 (63.54%), Postives = 152/181 (83.98%), Query Frame = 1
Query: 1 EAELSPKQFMKMLLEIGPIAVFFIVNARMGIFWGTGIFMLATLIALVLSWRLLGKVPVMPLVSGVFVLVFGGLTLLLQDELFIKMKPTIVNAIFAAILLGGLAWGQTFTKILFGEVFKLSEEGWRVLTIRWALFFLFLAVVNEAVWRTQTTDFWISFKVWGIMPLTMIFAIAQIGLIKRYE 543
E + KQ +K+++E+GP+ VFFIVN+R GIF GTG FM+AT+IAL S LLG++ MPLV+GVFVLVFGGLTL LQD+ FIK+KPTIVN +FAAIL+ GL G+ F KI+FG+V +LSEEGWR+LT+RWALFF+FL+++NE +WR +TD W++FKV+GIMP+T +FA+AQIGL+K+YE
Sbjct: 13 EPQFDRKQLIKLVVELGPLIVFFIVNSRFGIFAGTGAFMVATVIALGASRALLGRIATMPLVTGVFVLVFGGLTLWLQDDHFIKIKPTIVNGLFAAILIAGLISGRLFLKIVFGDVMRLSEEGWRILTLRWALFFVFLSILNEVMWRFFSTDTWVAFKVFGIMPITFVFALAQIGLLKKYE 193
BLAST of mRNA_P-wetherbeei_contig16545.2.1 vs. uniprot
Match: V5SBN6_9HYPH (Inner membrane-spanning protein YciB n=1 Tax=Hyphomicrobium nitrativorans NL23 TaxID=1029756 RepID=V5SBN6_9HYPH) HSP 1 Score: 239 bits (609), Expect = 1.360e-77 Identity = 115/171 (67.25%), Postives = 140/171 (81.87%), Query Frame = 1
Query: 28 MKMLLEIGPIAVFFIVNARMGIFWGTGIFMLATLIALVLSWRLLGKVPVMPLVSGVFVLVFGGLTLLLQDELFIKMKPTIVNAIFAAILLGGLAWGQTFTKILFGEVFKLSEEGWRVLTIRWALFFLFLAVVNEAVWRTQTTDFWISFKVWGIMPLTMIFAIAQIGLIKRY 540
+K LLE+GP+ VFFIVNAR IFWGTG F++ATL++L S L GK+PVMPLVSGVFV++FG LTL LQDELFIK+KPTIVN IFA+IL GGL +G K LFG+VF L+ EGWR LT RWA FF+FLA++NE WR +TD W+SFK++GIMP+TM FAIAQ+GL+KRY
Sbjct: 20 LKFLLELGPLVVFFIVNARADIFWGTGCFVVATLVSLTASRILFGKIPVMPLVSGVFVILFGSLTLYLQDELFIKLKPTIVNGIFASILFGGLLFGHALLKYLFGDVFALTAEGWRKLTFRWACFFVFLAILNEVTWRLLSTDAWVSFKLFGIMPITMAFAIAQVGLLKRY 190
BLAST of mRNA_P-wetherbeei_contig16545.2.1 vs. uniprot
Match: A0A679KET9_9HYPH (Inner membrane-spanning protein YciB n=3 Tax=Hyphomicrobium TaxID=81 RepID=A0A679KET9_9HYPH) HSP 1 Score: 238 bits (607), Expect = 3.240e-77 Identity = 114/181 (62.98%), Postives = 150/181 (82.87%), Query Frame = 1
Query: 1 EAELSPKQFMKMLLEIGPIAVFFIVNARMGIFWGTGIFMLATLIALVLSWRLLGKVPVMPLVSGVFVLVFGGLTLLLQDELFIKMKPTIVNAIFAAILLGGLAWGQTFTKILFGEVFKLSEEGWRVLTIRWALFFLFLAVVNEAVWRTQTTDFWISFKVWGIMPLTMIFAIAQIGLIKRYE 543
E + KQ +K+L+E+GP+ VFFI N+R GIF GTG FM+AT+I+L S LLG++ MPLV+GVFVLVFGGLTL LQD+ FIK+KPTIVN +FAAIL GL G+ F KI+FG+V +LSEEGWR+LT+RWALFF+FLA++NE +WR +TD W++FKV+GIMP+T +FA+AQIG++K+YE
Sbjct: 13 EPQFDRKQLIKLLVELGPLVVFFIGNSRYGIFAGTGAFMVATVISLAASHFLLGRIATMPLVTGVFVLVFGGLTLWLQDDHFIKIKPTIVNGLFAAILFAGLLSGRLFLKIVFGDVMRLSEEGWRILTLRWALFFVFLAILNEVMWRLFSTDTWVAFKVFGIMPITFLFALAQIGILKKYE 193
BLAST of mRNA_P-wetherbeei_contig16545.2.1 vs. uniprot
Match: A0A6I0EJB1_HYPSQ (Inner membrane-spanning protein YciB n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0EJB1_HYPSQ) HSP 1 Score: 238 bits (606), Expect = 3.650e-77 Identity = 111/174 (63.79%), Postives = 145/174 (83.33%), Query Frame = 1
Query: 22 QFMKMLLEIGPIAVFFIVNARMGIFWGTGIFMLATLIALVLSWRLLGKVPVMPLVSGVFVLVFGGLTLLLQDELFIKMKPTIVNAIFAAILLGGLAWGQTFTKILFGEVFKLSEEGWRVLTIRWALFFLFLAVVNEAVWRTQTTDFWISFKVWGIMPLTMIFAIAQIGLIKRYE 543
Q +K+ +E+GP+ VFFIVNAR GIFWGTGIFML T+ +L+ S + G++PVMPLVSGV V+VFGGLTL LQD+ FIK+KPTIVNA+FA L GGL G + K++FGEVF+L+++GWR LT+RWA FF FLA++NE +WRT +TD W+SFKV+ IMPLTM+FA++QIGL+K +E
Sbjct: 19 QLLKLAVEVGPLVVFFIVNARAGIFWGTGIFMLVTIASLIASRLMFGRIPVMPLVSGVCVVVFGGLTLWLQDDHFIKIKPTIVNALFATALFGGLLAGHSLLKVVFGEVFRLTDDGWRKLTLRWACFFTFLALLNEVIWRTVSTDAWVSFKVFAIMPLTMVFALSQIGLLKAHE 192 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16545.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16545.2.1 >prot_P-wetherbeei_contig16545.2.1 ID=prot_P-wetherbeei_contig16545.2.1|Name=mRNA_P-wetherbeei_contig16545.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=174bp MKMLLEIGPIAVFFIVNARMGIFWGTGIFMLATLIALVLSWRLLGKVPVMback to top mRNA from alignment at P-wetherbeei_contig16545:849..1397- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16545.2.1 ID=mRNA_P-wetherbeei_contig16545.2.1|Name=mRNA_P-wetherbeei_contig16545.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=549bp|location=Sequence derived from alignment at P-wetherbeei_contig16545:849..1397- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16545:849..1397- >mRNA_P-wetherbeei_contig16545.2.1 ID=mRNA_P-wetherbeei_contig16545.2.1|Name=mRNA_P-wetherbeei_contig16545.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig16545:849..1397- (Phaeothamnion wetherbeei SAG_119_79)back to top |