prot_P-wetherbeei_contig16539.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16539.1.1
Unique Nameprot_P-wetherbeei_contig16539.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length171
Homology
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BLAST of mRNA_P-wetherbeei_contig16539.1.1 vs. uniprot
Match: A0A836C9F9_9STRA (Magnesium transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F9_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.930e-12
Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 0 
Query:   74 LGEVMRRFRVHARDVIELGLQDIGGGGCAGIDGRDGFEASTPLILPRSGVIVVSLGHLKALVYEGACLLFDAQRPAVAESAESLADTLR 162
            + +V+RRF VHARD+I LGL                     P ILPR  VIVV++GHLKAL+Y  +CL+F+A++P VA     LA+ +R
Sbjct:    1 MSDVLRRFGVHARDIISLGLDS-------------SSWTPPPAILPRGNVIVVAIGHLKALIYHNSCLVFEAKKPVVAAVTCELAELMR 76
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16539.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836C9F9_9STRA2.930e-1243.82Magnesium transporter n=1 Tax=Tribonema minus TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.128.330coord: 46..145
e-value: 1.1E-6
score: 30.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16539contigP-wetherbeei_contig16539:878..1390 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16539.1.1mRNA_P-wetherbeei_contig16539.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16539 878..1390 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16539.1.1 ID=prot_P-wetherbeei_contig16539.1.1|Name=mRNA_P-wetherbeei_contig16539.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp
MTQCLARALCRSARQRAAPTFFASSWRPRPVFCLYFGASARPITSPHGAA
RFDRQFSVVEIDAAGAMRPKLVTLGEVMRRFRVHARDVIELGLQDIGGGG
CAGIDGRDGFEASTPLILPRSGVIVVSLGHLKALVYEGACLLFDAQRPAV
AESAESLADTLRHAAACAQVV
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