prot_P-wetherbeei_contig16528.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig16528.1.1
Unique Nameprot_P-wetherbeei_contig16528.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length269
Homology
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BLAST of mRNA_P-wetherbeei_contig16528.1.1 vs. uniprot
Match: A0A5D6XL65_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL65_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 8.750e-9
Identity = 53/183 (28.96%), Postives = 63/183 (34.43%), Query Frame = 0 
Query:   87 PGVPPPHYACHKCGQAGHWIQDCQDARSGGXXXXXXXXXXXXQRSEGGGXRGSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGARPAGAPEDPYGAATAMLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGDLLCEPCEKSFKTESQLAAHAASHEPCRVPGCGFAASRKVVSAH 269
            P  PP  Y CHKCG+ GHWIQDCQ A S                 E GG R                                   P  RP   P+ P  A  A   +                                 +C+ C+K+F  ESQ  AH  +H  C  PGCGFAAS++VV AH
Sbjct:  234 PRPPPSTYCCHKCGEPGHWIQDCQAASS---------------NRERGGDRSQRPASYAHPPRQLSLSSSQLQHHQAAPPLPDCDAP-QRPHHPPQ-PVDADDATPDSHATHEPDANDAALSLLPP------------SQWVCKGCDKTFALESQFLAHERTHVQCHAPGCGFAASKRVVGAH 387
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16528.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A5D6XL65_9STRA8.750e-928.96Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D4.10.60.10coord: 90..133
e-value: 4.9E-7
score: 32.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 95..110
e-value: 2.5E-4
score: 21.0
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 96..111
score: 9.504374
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 229..249
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 227..254
score: 9.639517
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 79..115
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 216..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16528contigP-wetherbeei_contig16528:703..1509 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16528.1.1mRNA_P-wetherbeei_contig16528.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig16528 452..1509 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig16528.1.1 ID=prot_P-wetherbeei_contig16528.1.1|Name=mRNA_P-wetherbeei_contig16528.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=269bp
MNPHAFFWQQQHQLPQQQQAPSPAQQQGQYQQAPEYSYGVGPPYGWAQQG
YQQQPRYGYGGHPSGPPGPPPVLISGFPDSWSAGGGPGVPPPHYACHKCG
QAGHWIQDCQDARSGGGGGGGGGGRGRGQRSEGGGGRGSIGGGGAGHGGR
GGGGQRGRGGRRGGGRGFSNGGPGARPAGAPEDPYGAATAMLAAVTAAAA
AAAAGIGGGNGGSRNDEDDDDGGDGDLLCEPCEKSFKTESQLAAHAASHE
PCRVPGCGFAASRKVVSAH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR013087Znf_C2H2_type
IPR036875Znf_CCHC_sf
IPR036236Znf_C2H2_sf