mRNA_P-wetherbeei_contig16479.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16479.1.2
Unique NamemRNA_P-wetherbeei_contig16479.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16479.1.2 vs. uniprot
Match: A0A835ZFJ3_9STRA (TOG domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFJ3_9STRA)

HSP 1 Score: 267 bits (683), Expect = 9.830e-79
Identity = 157/293 (53.58%), Postives = 186/293 (63.48%), Query Frame = 1
Query:   49 ERFKPGQHPLEGVPGVDELPTPEALSSRVDLSEVGGLNALLGDYVTRCLYSKAWVLREAAVLKIRLRLPALAALPSSAVASSPSAGGGTGPGLDQALPQLAQVLRLGAEDKIAQVFLTAGALLGDVLDAATADRTVRHNTLVSQLEPVVATLLLKLGDGQTRVRDGAMDGLVAVARCRTAGPGFVGHLAAKTMPRKQATAWRPVYARLQLLTALVREFGLSAGSGGGSSGLGADAVMAFVKDCGAFAHSNGQVRDAAKDLTVAVYKAVGDD-VERHLGELRPKQLEEYRQAFK 924
            E F  G+HPL GVP + +LP PE L  +VD SEV GL A+LG+YV RCLYS+AW LREAA +K                                       VLR+G EDKIAQVFLT   LL  V+  A  +++VR   L S LEPVV TL+ KLGDGQ RVRD AMDGL+AVARCR AG GF+   A K +P+K  TAWRP+ ARLQLL +L++EFG+ AG  G    L  DAVM F+K C  FAH +G+VRDAAK+LTVAV  A     VERHLG LRPKQLEEYR+AF+
Sbjct:  419 EVFAGGEHPLRGVPNLGDLPVPEPLLLKVDSSEVQGLIAVLGEYVARCLYSRAWTLREAAAIK---------------------------------------VLRVGCEDKIAQVFLTTVELLKAVVGMAARNKSVRLPQLFSLLEPVVYTLVQKLGDGQARVRDTAMDGLMAVARCRAAGCGFIASAALKPLPKKLLTAWRPITARLQLLLSLLKEFGVDAGPSGNV--LSVDAVMGFIKACNGFAHPSGEVRDAAKELTVAVAAASSSAAVERHLGTLRPKQLEEYREAFR 670          
BLAST of mRNA_P-wetherbeei_contig16479.1.2 vs. uniprot
Match: D7FPV5_ECTSI (TOG domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV5_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 5.010e-76
Identity = 151/296 (51.01%), Postives = 184/296 (62.16%), Query Frame = 1
Query:   52 RFKPGQHPLEGVPGVD--ELPTPEALSSRVDLSEVGGLNALLGDYVTRCLYSKAWVLREAAVLKIRLRLPALAALPSSAVASSPSAGGGTGPGLDQALPQLAQVLRLGAEDKIAQVFLTAGALLGDVLDAATADRTVRHNTLVSQLEPVVATLLLKLGDGQTRVRDGAMDGLVAVARCRTAGPGFVGHLAAKTMPRKQATAWRPVYARLQLLTALVREFGLSAGSGGGSSGLGADAVMAFVKDCGAFAHSNGQVRDAAKDLTVAVYKAVGDDVERHLGELRPKQLEEYRQAFKEAG 933
            R+ PG HPLEGVP +D  +L  PE LS++VDLSEV GLN LLGDY+TRCLYSK W LREAAVLK                                                   VFLT   LL  VL +  A +  RHN +V+ LEP VATLL K GDGQ R+RDGAM+GLVAVARCRTAGP FV H+A K + +KQ +AWRP+ ARL LL  LV EFGL  G      GL AD +M+F++ C  FAHSNG VRDAA++LTVA++  VG+++E +L  LRPKQL+EY +AF+ +G
Sbjct:  398 RYPPGAHPLEGVPDLDLEDLAEPEPLSAKVDLSEVQGLNNLLGDYLTRCLYSKTWSLREAAVLK---------------------------------------------------VFLTTLDLLEAVLVSIGACKEARHNHVVAALEPTVATLLKKQGDGQARLRDGAMNGLVAVARCRTAGPVFVSHVALKPLVKKQLSAWRPITARLVLLRKLVSEFGLEGG------GLTADGIMSFIQSCNGFAHSNGDVRDAARELTVALHGLVGEEIEPYLTGLRPKQLDEYHEAFRHSG 636          
BLAST of mRNA_P-wetherbeei_contig16479.1.2 vs. uniprot
Match: A0A7S2SU62_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU62_9STRA)

HSP 1 Score: 223 bits (567), Expect = 3.430e-63
Identity = 142/306 (46.41%), Postives = 180/306 (58.82%), Query Frame = 1
Query:   49 ERFKPGQHPLEGVPGVDELPTPEALS--SRVDLSEVGGLNALLGDYVTRCLYSKAWVLREAAVLKIRLRLPALAALPSSAVASSPSAGGGTGPGLDQALPQLAQVLRLGAEDKIAQVFLTAGALLGDVLDAATADRTVRHNTLVSQ--LEPVVATLLLKLGDGQTRVRDGAMDGLVAVARCRTAGPGFVGHLAAKTMPRKQA--TAWRPVYARLQLLTALVREFGLSAGSGGGSSGLGADAVMAFVKDCGAFAHSNGQVRDAAKDLTVAVYKAVGDDVERHLGELRPKQLEEYRQAFKEA---GAP 939
            E   PG HPLEGVPG +ELP+PE LS  S  + ++V GL  L GDY  RCL SK W LREAA++K +L +P L                    GL   L    QVL+LG  DKIAQVF T+  LL D+    ++D     +  + Q  LEP    L+LKLG+ Q RVR+ A D L+AVA C+ AG  FV   A K +P+KQ     WRP+  RLQLLT LV  FG++      SSGL  D  M FV+D  A +H+  +VRDAA++LTV++Y+ VG  VE +L  LR KQ EEY QAF++A   GAP
Sbjct:  265 EELPPGPHPLEGVPGFEELPSPEPLSPTSAGEATDVNGLLQLFGDYRVRCLVSKQWNLREAAIIKAKLLMPELI----------------RDGGLANILQPFCQVLKLGVADKIAQVFATSLGLLDDLCHVLSSDEQQAASPQILQKLLEPTAHMLVLKLGENQPRVRESAFDSLLAVAHCQAAGCDFVVRCATKALPKKQTGNRIWRPLATRLQLLTNLVDLFGVNQ-----SSGLSTDTCMKFVRDNNATSHTFSEVRDAARELTVSLYRHVGTSVEPYLSNLRVKQREEYEQAFQQAIGGGAP 549          
BLAST of mRNA_P-wetherbeei_contig16479.1.2 vs. uniprot
Match: A0A7S2SU98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU98_9STRA)

HSP 1 Score: 199 bits (507), Expect = 6.530e-56
Identity = 127/279 (45.52%), Postives = 162/279 (58.06%), Query Frame = 1
Query:   49 ERFKPGQHPLEGVPGVDELPTPEALS--SRVDLSEVGGLNALLGDYVTRCLYSKAWVLREAAVLKIRLRLPALAALPSSAVASSPSAGGGTGPGLDQALPQLAQVLRLGAEDKIAQVFLTAGALLGDVLDAATADRTVRHNTLVSQ--LEPVVATLLLKLGDGQTRVRDGAMDGLVAVARCRTAGPGFVGHLAAKTMPRKQA--TAWRPVYARLQLLTALVREFGLSAGSGGGSSGLGADAVMAFVKDCGAFAHSNGQVRDAAKDLTVAVYKAVGDDVE 867
            E   PG HPLEGVPG +ELP+PE LS  S  + ++V GL  L GDY  RCL SK W LREAA++K +L +P L                    GL   L    QVL+LG  DKIAQVF T+  LL D+    ++D     +  + Q  LEP    L+LKLG+ Q RVR+ A D L+AVA C+ AG  FV   A K +P+KQ     WRP+  RLQLLT LV  FG++      SSGL  D  M FV+D  A +H+  +VRDAA++LTV++Y+ VG  VE
Sbjct:  265 EELPPGPHPLEGVPGFEELPSPEPLSPTSAGEATDVNGLLQLFGDYRVRCLVSKQWNLREAAIIKAKLLMPELI----------------RDGGLANILQPFCQVLKLGVADKIAQVFATSLGLLDDLCHVLSSDEQQAASPQILQKLLEPTAHMLVLKLGENQPRVRESAFDSLLAVAHCQAAGCDFVVRCATKALPKKQTGNRIWRPLATRLQLLTNLVDLFGVNQ-----SSGLSTDTCMKFVRDNNATSHTFSEVRDAARELTVSLYRHVGISVE 522          
BLAST of mRNA_P-wetherbeei_contig16479.1.2 vs. uniprot
Match: A0A7S2GCC0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCC0_9STRA)

HSP 1 Score: 171 bits (434), Expect = 7.200e-48
Identity = 120/287 (41.81%), Postives = 159/287 (55.40%), Query Frame = 1
Query:   97 DELPTPEALS-SRVDLSEVGG------LNALLGDYVTRCLYSKAWVLREAAVLKIRLRLPALAALPSSAVASSPSAGGGTGPGLDQALPQLAQVLRLGAEDKIAQVFLTAGALLGDVLDAATADRTVRHNTLVSQLEPVVATLLLKLGDGQTRVRDGAMDGLVAVARCRTAGPGFVGHLAAKTMPRKQA--TAWRPVYARLQLLTALVREFGLSAGSGGGSSGLGADAVMAFVKDCGAFAHSNGQVRDAAKDLTVAVYKAVGDDVERHLGELRPKQLEEYRQAFKEA 930
            ++LP PE L+ S       GG      L  L+G+Y+ RC+ SK W LREAA++K++L LP L                 T PG    L  LA VLR G EDKIAQVFL+   LL        A R   H  +  QLEP    L+LKLG+ Q RVR+ A+D L+ +A C   G  FV     K +P+KQ     WRP+  RLQLL  L+ +FG++    G +S    + +M F+    A +H+  +VRDAA++LTVA+++ VG DVE +L  LR KQ EEY QAF EA
Sbjct:    2 EDLPVPEPLAASGGGADNAGGPANDTELLNLVGEYLVRCIMSKQWSLREAAIIKMKLMLPDLC----------------TDPGAGSILQPLANVLRGGIEDKIAQVFLSTLGLLDAACKEFEAARLNTH-MVNKQLEPTATVLVLKLGENQPRVREAAIDSLLNLAHCEAVGLDFVVRSVTKKLPKKQTGNRIWRPLATRLQLLKDLLLQFGVT----GATS---TNTIMTFINSNEATSHTFQEVRDAARELTVALHQIVGADVEPYLEPLRLKQREEYDQAFAEA 264          
BLAST of mRNA_P-wetherbeei_contig16479.1.2 vs. uniprot
Match: A0A4D9CPN0_9STRA (UVR domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPN0_9STRA)

HSP 1 Score: 170 bits (430), Expect = 3.030e-43
Identity = 121/299 (40.47%), Postives = 168/299 (56.19%), Query Frame = 1
Query:   61 PGQHPLEGVPGVD--ELPTPEALSSR-VDLSEVGGLNALLGDYVTRCLYSKAWVLREAAVLKIRLRLPALAALPSSAVASSPSAGGGTGPG-----LDQALPQLAQVLRLGAEDKIAQVFLTAGALLGDVLDAATADRTVRHNTLVSQL-EPVVATLLLKLGDGQTRVRDGAMDGLVAVARCRTAGPGFVGHLAAKTMPRKQATAWRPVYARLQLLTALVREFGLSAGSGGGSSGLGADAVMAFVKDCGAFAHSNGQVRDAAKDLTVAVYKAVGDDVERHLGEL-RPKQLEEYRQAFKE 927
            PG HPL G+P  D  +LP PE L  +     EV  L  + G+Y TRC  SK WVLR+AAVLK+++ +                 GGG         L +ALP +A VL +  EDKI QVF+++  LL  +L A    R  R  +LV  L EPV+A+L+LKLGDGQ R+RD A+ GL  +A     G G VG  A + +  KQA+A + V  RL LL  LV E           +G+  +  + F++   AF+HS+G+VRDAA+++TVA+Y+ VG  V   +  L R KQ +EY +AF++
Sbjct:  462 PGPHPLAGIPTYDVHDLPYPEVLGGQDAGAGEVPTLVCVFGEYWTRCFLSKLWVLRDAAVLKVKVLVE----------------GGGEXXXXXXLDLAEALPAVADVLAVAVEDKIVQVFMSSLLLLHSLLTAVQTRRFKR--SLVGPLVEPVIASLVLKLGDGQQRIRDAALAGLSDMAGSACVGVGGVGPYALRKLQPKQASAGKTVLCRLLLLKKLVVEGAKXXXXXXXGAGMPVEEAVGFMRAARAFSHSSGEVRDAAREVTVALYRQVGGSVYALVEPLLRRKQRDEYEEAFRQ 742          
BLAST of mRNA_P-wetherbeei_contig16479.1.2 vs. uniprot
Match: A0A7R9Y8Y5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8Y5_9STRA)

HSP 1 Score: 152 bits (384), Expect = 5.830e-38
Identity = 109/287 (37.98%), Postives = 151/287 (52.61%), Query Frame = 1
Query:   64 GQHPLEGVPGVDELPTPEALSSRVDLSEVGGLNALLGDYVTRCLYSKAWVLREAAVLKIRLRLPALAALPSSAVASSPSAGGGTGPGLDQALPQLAQVLRLGAEDKIAQVFLTAGALLGDVLDAATADRTVRHNTLVSQLEPVVATLLLKLGDGQTRVRDGAMDGLVAVARCRTAGPGFVGHLAAKTMPRKQATAWRPVYARLQLLTALVREFGLSAGSGGGSSGLGADAVMAFVKDCGAFAHSNGQVRDAAKDLTVAVYKAVGDDVER-HLGELRPKQLEEYRQAF 921
            G HPLEGV    ELP PE L++  + S       + G+YVTRCL S  W LR+ A+LK  L +P  AA   S               L + LP    ++  G  DKIAQV  ++  LL +++      R    +     +E V A L  K GDG TR+RD A   L+ +A     G   VG +  + M +KQA   R + +RL LL  L+   GL+ G         A+ +++F +  GAF HSN QVRDAA++LTVAVY   GD+  R ++ +LRPKQ++EY+ AF
Sbjct:   87 GPHPLEGVENYQELPEPEPLTAPEEFSS---WVRVYGEYVTRCLRSATWQLRDVALLKTSLVVPTYAAEDGS---------------LGELLPVSLGIVLNGLRDKIAQVAYSSLILLRELIKRCQQQRIGFSHLKECGIENVFAALSEKAGDGNTRLRDQACTALLNMAASPVIGINPVGGICCRRMSKKQANNPRSLVSRLNLLRDLIESRGLTQGGS-----FTAEHILSFAQYHGAFTHSNAQVRDAARELTVAVYAMKGDNAVRPYVEKLRPKQMQEYQAAF 350          
BLAST of mRNA_P-wetherbeei_contig16479.1.2 vs. uniprot
Match: A0A7S3ZTR6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTR6_9STRA)

HSP 1 Score: 147 bits (371), Expect = 2.380e-36
Identity = 105/292 (35.96%), Postives = 157/292 (53.77%), Query Frame = 1
Query:   76 LEGVPGVDELPTPEALSSR--VDLSEVGGLNALLGDYVTRCLYSKAWVLREAAVLKIRLRLPALAALPSSAVASSPSAGGGTGPGLDQALPQLAQVLRLGAEDKIAQVFLTAGALLGDVLDAATADRTVRHNTLVSQLEPVVATLLLKLGDGQTRVRDGAMDGLVAVARCRTAGPGFVGHLAAKTMPRKQA--TAWRPVYARLQLLTALVREFGLSAG--SGGGSSGLGADAVMAFVKDCGAFAHSNGQVRDAAKDLTVAVYKAVGDD-----VERHLGELRPKQLEEYRQA 918
            L G+P V ELP PEA ++   V  ++   ++  LG+Y   CL SK W LREAA+ K RL +                  G  G   D A   L  + RLG +DK+AQV+LTA ALL DV+   +  +  +   +++ +EP +  ++ KLGD Q R+R+ A+D L + + CR  G   +      ++ +K+     WRP+  RL+LL  L RE+GL+ G  SG G   L   +V+ FV+  G  +H+  +VR AAKDL V ++ A  +      +E  L ++RP+Q EEYR A
Sbjct:  113 LSGLPNVAELPAPEAFAATDIVADADFSAISVFLGEYRACCLMSKNWALREAALAKTRLLVSE----------------GCWGRSEDMA--HLCSIARLGIQDKVAQVYLTALALLEDVIQKFSC-QDFKSADMLTAMEPALDAIVSKLGDNQARLREKAVDALASPSYCRVIGARQIAAKVMHSLDKKRPPHNKWRPLATRLELLRRLAREYGLNRGVASGNGLHALDLGSVIGFVEIHGCASHTFEEVRTAAKDLIVEMFIAASESDRLQALEPFLHKIRPRQAEEYRNA 385          
BLAST of mRNA_P-wetherbeei_contig16479.1.2 vs. uniprot
Match: A0A7S3ZTN6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTN6_9STRA)

HSP 1 Score: 147 bits (371), Expect = 7.730e-36
Identity = 105/292 (35.96%), Postives = 157/292 (53.77%), Query Frame = 1
Query:   76 LEGVPGVDELPTPEALSSR--VDLSEVGGLNALLGDYVTRCLYSKAWVLREAAVLKIRLRLPALAALPSSAVASSPSAGGGTGPGLDQALPQLAQVLRLGAEDKIAQVFLTAGALLGDVLDAATADRTVRHNTLVSQLEPVVATLLLKLGDGQTRVRDGAMDGLVAVARCRTAGPGFVGHLAAKTMPRKQA--TAWRPVYARLQLLTALVREFGLSAG--SGGGSSGLGADAVMAFVKDCGAFAHSNGQVRDAAKDLTVAVYKAVGDD-----VERHLGELRPKQLEEYRQA 918
            L G+P V ELP PEA ++   V  ++   ++  LG+Y   CL SK W LREAA+ K RL +                  G  G   D A   L  + RLG +DK+AQV+LTA ALL DV+   +  +  +   +++ +EP +  ++ KLGD Q R+R+ A+D L + + CR  G   +      ++ +K+     WRP+  RL+LL  L RE+GL+ G  SG G   L   +V+ FV+  G  +H+  +VR AAKDL V ++ A  +      +E  L ++RP+Q EEYR A
Sbjct:  253 LSGLPNVAELPAPEAFAATDIVADADFSAISVFLGEYRACCLMSKNWALREAALAKTRLLVSE----------------GCWGRSEDMA--HLCSIARLGIQDKVAQVYLTALALLEDVIQKFSC-QDFKSADMLTAMEPALDAIVSKLGDNQARLREKAVDALASPSYCRVIGARQIAAKVMHSLDKKRPPHNKWRPLATRLELLRRLAREYGLNRGVASGNGLHALDLGSVIGFVEIHGCASHTFEEVRTAAKDLIVEMFIAASESDRLQALEPFLHKIRPRQAEEYRNA 525          
BLAST of mRNA_P-wetherbeei_contig16479.1.2 vs. uniprot
Match: A0A7S3ZTY2_9STRA (Hypothetical protein n=6 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTY2_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.530e-35
Identity = 105/292 (35.96%), Postives = 157/292 (53.77%), Query Frame = 1
Query:   76 LEGVPGVDELPTPEALSSR--VDLSEVGGLNALLGDYVTRCLYSKAWVLREAAVLKIRLRLPALAALPSSAVASSPSAGGGTGPGLDQALPQLAQVLRLGAEDKIAQVFLTAGALLGDVLDAATADRTVRHNTLVSQLEPVVATLLLKLGDGQTRVRDGAMDGLVAVARCRTAGPGFVGHLAAKTMPRKQA--TAWRPVYARLQLLTALVREFGLSAG--SGGGSSGLGADAVMAFVKDCGAFAHSNGQVRDAAKDLTVAVYKAVGDD-----VERHLGELRPKQLEEYRQA 918
            L G+P V ELP PEA ++   V  ++   ++  LG+Y   CL SK W LREAA+ K RL +                  G  G   D A   L  + RLG +DK+AQV+LTA ALL DV+   +  +  +   +++ +EP +  ++ KLGD Q R+R+ A+D L + + CR  G   +      ++ +K+     WRP+  RL+LL  L RE+GL+ G  SG G   L   +V+ FV+  G  +H+  +VR AAKDL V ++ A  +      +E  L ++RP+Q EEYR A
Sbjct:  376 LSGLPNVAELPAPEAFAATDIVADADFSAISVFLGEYRACCLMSKNWALREAALAKTRLLVSE----------------GCWGRSEDMA--HLCSIARLGIQDKVAQVYLTALALLEDVIQKFSC-QDFKSADMLTAMEPALDAIVSKLGDNQARLREKAVDALASPSYCRVIGARQIAAKVMHSLDKKRPPHNKWRPLATRLELLRRLAREYGLNRGVASGNGLHALDLGSVIGFVEIHGCASHTFEEVRTAAKDLIVEMFIAASESDRLQALEPFLHKIRPRQAEEYRNA 648          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16479.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZFJ3_9STRA9.830e-7953.58TOG domain-containing protein n=1 Tax=Tribonema mi... [more]
D7FPV5_ECTSI5.010e-7651.01TOG domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2SU62_9STRA3.430e-6346.41Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2SU98_9STRA6.530e-5645.52Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2GCC0_9STRA7.200e-4841.81Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A4D9CPN0_9STRA3.030e-4340.47UVR domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A7R9Y8Y5_9STRA5.830e-3837.98Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3ZTR6_9STRA2.380e-3635.96Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3ZTN6_9STRA7.730e-3635.96Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3ZTY2_9STRA1.530e-3535.96Hypothetical protein n=6 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16479contigP-wetherbeei_contig16479:81..1380 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FPV5
PFAMsUVR,XRCC1_N
Model size1048
Max annot lvl2759|Eukaryota
KEGG koko:K16458
Hectar predicted targeting categoryother localisation
Exons2
Evalue8.22e-77
EggNOG OGsKOG4825@1|root,KOG4825@2759|Eukaryota
Descriptionthienylcyclohexylpiperidine binding
Cds size1047
COG categoryM
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186088.0242076-CDS-P-wetherbeei_contig16479:80..3231683186088.0242076-CDS-P-wetherbeei_contig16479:80..323Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16479 81..323 -
1683186088.0329478-CDS-P-wetherbeei_contig16479:576..13801683186088.0329478-CDS-P-wetherbeei_contig16479:576..1380Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16479 577..1380 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16479.1.2prot_P-wetherbeei_contig16479.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16479 81..1380 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16479.1.2

>prot_P-wetherbeei_contig16479.1.2 ID=prot_P-wetherbeei_contig16479.1.2|Name=mRNA_P-wetherbeei_contig16479.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=349bp
GRGGGGSGGGGGGGGGERFKPGQHPLEGVPGVDELPTPEALSSRVDLSEV
GGLNALLGDYVTRCLYSKAWVLREAAVLKIRLRLPALAALPSSAVASSPS
AGGGTGPGLDQALPQLAQVLRLGAEDKIAQVFLTAGALLGDVLDAATADR
TVRHNTLVSQLEPVVATLLLKLGDGQTRVRDGAMDGLVAVARCRTAGPGF
VGHLAAKTMPRKQATAWRPVYARLQLLTALVREFGLSAGSGGGSSGLGAD
AVMAFVKDCGAFAHSNGQVRDAAKDLTVAVYKAVGDDVERHLGELRPKQL
EEYRQAFKEAGAPLVTSFAAAATAAPGGGATSRRRQSAGGSVGSSGGGG
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mRNA from alignment at P-wetherbeei_contig16479:81..1380-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16479.1.2 ID=mRNA_P-wetherbeei_contig16479.1.2|Name=mRNA_P-wetherbeei_contig16479.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1300bp|location=Sequence derived from alignment at P-wetherbeei_contig16479:81..1380- (Phaeothamnion wetherbeei SAG_119_79)
GGTCGTGGAGGCGGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGA GCGCTTCAAGCCGGGGCAACACCCGTTGGAGGGCGTCCCCGGTGTGGACG AATTGCCGACGCCTGAGGCGCTGAGCTCCCGCGTCGACCTGAGCGAGGTC GGCGGCCTCAACGCGCTGCTTGGCGACTACGTGACCCGCTGCCTCTACAG CAAAGCATGGGTGCTTCGCGAGGCGGCCGTCCTCAAGATCCGGCTCCGCC TGCCGGCACTGGCTGCCCTGCCGTCATCGGCGGTGGCGTCGTCTCCCTCG GCTGGCGGCGGCACTGGGCCCGGGCTGGACCAGGCGCTGCCGCAGCTGGC GCAGGTGCTCCGCCTCGGTGCGGAAGACAAGATCGCGCAGGTGTTTCTGA CGGCCGGGGCGCTGCTCGGTGACGTGCTGGATGCTGCGACCGCCGACCGG ACCGTCCGCCACAACACGCTCGTCTCCCAGCTGGAACCCGTCGTGGCCAC GCTCCTCTTAAAGCTCGGCGACGGACAGACACGGGTCCGAGACGGCGCAA TGGACGGACTGGTGGCAGTGGCACGCTGCCGGACTGCTGGGCCGGGTTTT GTGGGCCACCTGGCGGCCAAGACGATGCCGCGGAAGCAGGCGACGGCGTG GCGGCCGGTGTACGCGCGGCTGCAGCTGCTGACGGCGCTTGTGCGCGAGT TTGGGCTTTCGGCGGGCAGTGGCGGCGGCAGCAGCGGGCTCGGCGCGGAT GCTGTCATGGCGTTTGTGAAGGACTGCGGCGCCTTTGCGCACTCCAACGG CCAGGCGAGTCACTCGGTTTTTCTTCGCGTGGTTAACTTTTCTTGATTGA CCTTGTTTCGTTGCATCGGTGCATAAGACATAAATTGGGTGTTCAACTGT CTCCTTTCCGATTTCGTACCTAGCAAATTGCTGATTCCTCTTGCCTCCGT TCCCTTTTCGCCATCCATGCCCTTTTTTTCGGCGCTCTGGTGGCTCACCC TGGTTCCATTCTTGCTTGACGAAATGGTCGATTTTTATATGTGTTTGGCA AACACAGGTGCGGGATGCGGCGAAGGACCTGACGGTGGCGGTCTACAAGG CGGTGGGGGACGACGTCGAGAGACACCTCGGCGAGCTCCGCCCCAAACAG CTCGAGGAGTACCGCCAGGCCTTCAAGGAGGCCGGCGCCCCGCTCGTCAC CAGCTTCGCCGCCGCCGCCACCGCCGCTCCCGGGGGCGGCGCTACCAGCC GCCGGAGGCAGAGCGCAGGCGGCAGCGTGGGCAGCAGCGGCGGCGGTGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16479:81..1380-

>mRNA_P-wetherbeei_contig16479.1.2 ID=mRNA_P-wetherbeei_contig16479.1.2|Name=mRNA_P-wetherbeei_contig16479.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1047bp|location=Sequence derived from alignment at P-wetherbeei_contig16479:81..1380- (Phaeothamnion wetherbeei SAG_119_79)
GGTCGTGGAGGCGGCGGCAGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGA
GCGCTTCAAGCCGGGGCAACACCCGTTGGAGGGCGTCCCCGGTGTGGACG
AATTGCCGACGCCTGAGGCGCTGAGCTCCCGCGTCGACCTGAGCGAGGTC
GGCGGCCTCAACGCGCTGCTTGGCGACTACGTGACCCGCTGCCTCTACAG
CAAAGCATGGGTGCTTCGCGAGGCGGCCGTCCTCAAGATCCGGCTCCGCC
TGCCGGCACTGGCTGCCCTGCCGTCATCGGCGGTGGCGTCGTCTCCCTCG
GCTGGCGGCGGCACTGGGCCCGGGCTGGACCAGGCGCTGCCGCAGCTGGC
GCAGGTGCTCCGCCTCGGTGCGGAAGACAAGATCGCGCAGGTGTTTCTGA
CGGCCGGGGCGCTGCTCGGTGACGTGCTGGATGCTGCGACCGCCGACCGG
ACCGTCCGCCACAACACGCTCGTCTCCCAGCTGGAACCCGTCGTGGCCAC
GCTCCTCTTAAAGCTCGGCGACGGACAGACACGGGTCCGAGACGGCGCAA
TGGACGGACTGGTGGCAGTGGCACGCTGCCGGACTGCTGGGCCGGGTTTT
GTGGGCCACCTGGCGGCCAAGACGATGCCGCGGAAGCAGGCGACGGCGTG
GCGGCCGGTGTACGCGCGGCTGCAGCTGCTGACGGCGCTTGTGCGCGAGT
TTGGGCTTTCGGCGGGCAGTGGCGGCGGCAGCAGCGGGCTCGGCGCGGAT
GCTGTCATGGCGTTTGTGAAGGACTGCGGCGCCTTTGCGCACTCCAACGG
CCAGGTGCGGGATGCGGCGAAGGACCTGACGGTGGCGGTCTACAAGGCGG
TGGGGGACGACGTCGAGAGACACCTCGGCGAGCTCCGCCCCAAACAGCTC
GAGGAGTACCGCCAGGCCTTCAAGGAGGCCGGCGCCCCGCTCGTCACCAG
CTTCGCCGCCGCCGCCACCGCCGCTCCCGGGGGCGGCGCTACCAGCCGCC
GGAGGCAGAGCGCAGGCGGCAGCGTGGGCAGCAGCGGCGGCGGTGGC
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