mRNA_P-wetherbeei_contig16472.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16472.2.1
Unique NamemRNA_P-wetherbeei_contig16472.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16472.2.1 vs. uniprot
Match: UPI00198287C8 (Sulfur oxidation c-type cytochrome SoxA n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI00198287C8)

HSP 1 Score: 447 bits (1149), Expect = 2.590e-157
Identity = 210/260 (80.77%), Postives = 231/260 (88.85%), Query Frame = 1
Query:   28 AGQVPASPEQDRTAFIALYQEKFPSVPLDEYVNGALMLSSDAKSQFDSIMEFPPFQGDIDRGKALWEKPFGNGRNFAGCFANGGRDVAGNYPYYATTLDRVITFEMDINRCLRDNGETEFKFGNKATMGAITAYARTLSDGMRVNVRVPDGGALKKYEQGKKLYFTRMGQYNFACASCHMVNAGKILRTEILSPAVGQTTHWPVFRGGDNLNTLHMRYRRCMEQMRAVPFAAGSEELNNLEYFHSYLSNGLPMRASVYRK 807
            AG+  A+PE+DR  FI+LY+  FP++PL+ YVNGALMLSSDA SQFDSIMEFPPFQGDIDRG+ LWE PF +G+ FA CFA GGR+VAGNYP+Y    D+V+TFEM+INRCLRDNGE E+KF +KATMG ITAYARTLSDGMRVNVRV   G L KYEQGKKLYFTR+GQYNFACASCHM NAGKILRTEILSP++GQTTHWPVFRGGDNLNTLHMRYRRCMEQMRA PF AGSEELNNLEYFHSYLSNGLPMRASVYRK
Sbjct:    5 AGRSVAAPEEDRAQFISLYRGIFPTIPLESYVNGALMLSSDAMSQFDSIMEFPPFQGDIDRGRNLWEAPFRSGKTFASCFAGGGRNVAGNYPFYDPDRDKVVTFEMEINRCLRDNGEAEYKFNDKATMGTITAYARTLSDGMRVNVRVAGAGGLAKYEQGKKLYFTRIGQYNFACASCHMANAGKILRTEILSPSIGQTTHWPVFRGGDNLNTLHMRYRRCMEQMRAAPFPAGSEELNNLEYFHSYLSNGLPMRASVYRK 264          
BLAST of mRNA_P-wetherbeei_contig16472.2.1 vs. uniprot
Match: A0A6F8V797_9PROT (SoxAX cytochrome complex subunit A n=1 Tax=Sulfurimicrobium lacus TaxID=2715678 RepID=A0A6F8V797_9PROT)

HSP 1 Score: 344 bits (882), Expect = 1.660e-116
Identity = 162/270 (60.00%), Postives = 205/270 (75.93%), Query Frame = 1
Query:    1 LAALATGSTAGQVP-ASPEQDRTAFIALYQEKFPSVPLDEYVNGALMLSSDAKSQFDSIMEFPPFQGDIDRGKALWEKPFGNGRNFAGCFANGGRDVAGNYPYYATTLDRVITFEMDINRCLRDNGETEFKFGNKATMGAITAYARTLSDGMRVNVRVPDGGALKKYEQGKKLYFTRMGQYNFACASCHMVNAGKILRTEILSPAVGQTTHWPVFRGGDNLNTLHMRYRRCMEQMRAVPFAAGSEELNNLEYFHSYLSNGLPMRASVYRK 807
            LA L+ G     V  A PE DR   +  ++ K  ++  D+YV+GAL +  DAKSQ+DSIMEFPPF+G +D GK +WEKPF NG+ FA CF NGG++VAGNYPY+   L +V+TFEM IN+CL+DNGE EFK+G+  TMG +TAYARTLSDGMR+NV+V    AL  YE GK  +F R GQ NF+CASCH+ NAG  +R+E+LSP++GQ THWPVFRGG+NL T+  R+  C +Q+RAVPFA GSEE NNLEY+ SY+SNGLPM+ASV+RK
Sbjct:    6 LALLSAGLLVSAVAHAGPEDDRKQLVNYFKVKHGTIKFDDYVHGALAMDKDAKSQYDSIMEFPPFEGVVDAGKEMWEKPFKNGKTFASCFPNGGKNVAGNYPYFDDKLGKVVTFEMAINQCLKDNGEQEFKYGDVNTMGILTAYARTLSDGMRMNVKVSGPAALVAYEAGKDHFFRRRGQLNFSCASCHVDNAGNRIRSEVLSPSLGQATHWPVFRGGENLVTIQSRFVGCNKQVRAVPFAVGSEEYNNLEYYLSYMSNGLPMKASVFRK 275          
BLAST of mRNA_P-wetherbeei_contig16472.2.1 vs. uniprot
Match: A0A658BMC2_9PROT (SoxAX cytochrome complex subunit A n=1 Tax=Nitrosomonadales bacterium TaxID=2026761 RepID=A0A658BMC2_9PROT)

HSP 1 Score: 336 bits (862), Expect = 1.820e-113
Identity = 159/270 (58.89%), Postives = 197/270 (72.96%), Query Frame = 1
Query:    1 LAALATGSTAGQVP-ASPEQDRTAFIALYQEKFPSVPLDEYVNGALMLSSDAKSQFDSIMEFPPFQGDIDRGKALWEKPFGNGRNFAGCFANGGRDVAGNYPYYATTLDRVITFEMDINRCLRDNGETEFKFGNKATMGAITAYARTLSDGMRVNVRVPDGGALKKYEQGKKLYFTRMGQYNFACASCHMVNAGKILRTEILSPAVGQTTHWPVFRGGDNLNTLHMRYRRCMEQMRAVPFAAGSEELNNLEYFHSYLSNGLPMRASVYRK 807
            LA L  G  A     A PE DR   IA ++ K P+V  + YV GAL L  D+KSQ+DSIMEFPPF+G I+ GK +WEKPF NG+ FA CF NGG++VAGNYP +  +L++V+TFEMDIN+CL  NGE  FK+ +  TMG +T+YARTLSDGM++NV+V    AL  YE GKK YF R GQ NF+CA+CH+ NAG  +R EILSP +GQ+THWPVFR G+ L TL +RY+ C  Q+RA PF  GSEE NNLEYF SY  NGLP++ASV+RK
Sbjct:    6 LALLGAGLMASAAAQAGPEDDRKQMIAFFKSKLPAVKYENYVYGALALDKDSKSQYDSIMEFPPFEGVIEAGKEMWEKPFKNGKTFASCFPNGGKNVAGNYPRFDASLNKVVTFEMDINQCLTANGEAGFKYSDVNTMGILTSYARTLSDGMKMNVKVDGAAALAAYEAGKKFYFQRRGQLNFSCATCHVDNAGNRIRAEILSPTLGQSTHWPVFRAGERLTTLQVRYKGCNSQVRATPFEPGSEEFNNLEYFLSYQDNGLPLKASVFRK 275          
BLAST of mRNA_P-wetherbeei_contig16472.2.1 vs. uniprot
Match: A0A3D0ET32_9PROT (SoxAX cytochrome complex subunit A n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3D0ET32_9PROT)

HSP 1 Score: 328 bits (841), Expect = 2.820e-110
Identity = 151/269 (56.13%), Postives = 199/269 (73.98%), Query Frame = 1
Query:    1 LAALATGSTAGQVPASPEQDRTAFIALYQEKFPSVPLDEYVNGALMLSSDAKSQFDSIMEFPPFQGDIDRGKALWEKPFGNGRNFAGCFANGGRDVAGNYPYYATTLDRVITFEMDINRCLRDNGETEFKFGNKATMGAITAYARTLSDGMRVNVRVPDGGALKKYEQGKKLYFTRMGQYNFACASCHMVNAGKILRTEILSPAVGQTTHWPVFRGGDNLNTLHMRYRRCMEQMRAVPFAAGSEELNNLEYFHSYLSNGLPMRASVYRK 807
            L AL     + Q  ++PE+DR  F+A +    P VP+ +Y+ G++MLS DA +Q++SIM+FPPFQ  +D+GK +WE PF NG+ FA CF N G +VAG +PYY TT ++V+TFEM +N CL  NGET   + +  TMGA++AYAR+LSDGM + + VP+  AL KYE GK LYF R+GQYN ACASCH+ + G+  R E+LSP +GQ  H+PVFRGG+ L TL MRY+RCME + AV F +GSE LNNLE+FHSYLSNGLPM++SVYR+
Sbjct:    7 LTALIIFIASPQAWSNPEEDRQLFLATFAGNIPDVPISQYIYGSMMLSEDALNQYESIMDFPPFQEMVDQGKKVWETPFKNGQTFANCFGNKGTNVAGTFPYYDTTHEQVVTFEMALNFCLERNGETRMSYVDPETMGALSAYARSLSDGMLMQIEVPNAQALTKYELGKSLYFKRIGQYNLACASCHLTHGGRYFRDELLSPTIGQAVHFPVFRGGERLYTLQMRYQRCMEAVGAVAFESGSETLNNLEFFHSYLSNGLPMQSSVYRR 275          
BLAST of mRNA_P-wetherbeei_contig16472.2.1 vs. uniprot
Match: A0A3C1MS57_9PROT (SoxAX cytochrome complex subunit A n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3C1MS57_9PROT)

HSP 1 Score: 327 bits (838), Expect = 1.340e-109
Identity = 149/257 (57.98%), Postives = 192/257 (74.71%), Query Frame = 1
Query:   37 VPASPEQDRTAFIALYQEKFPSVPLDEYVNGALMLSSDAKSQFDSIMEFPPFQGDIDRGKALWEKPFGNGRNFAGCFANGGRDVAGNYPYYATTLDRVITFEMDINRCLRDNGETEFKFGNKATMGAITAYARTLSDGMRVNVRVPDGGALKKYEQGKKLYFTRMGQYNFACASCHMVNAGKILRTEILSPAVGQTTHWPVFRGGDNLNTLHMRYRRCMEQMRAVPFAAGSEELNNLEYFHSYLSNGLPMRASVYRK 807
            V A+PE DR + +  ++ K+P V  D Y+ GAL    DAK+Q+DSIM+FPPF   +D+GKA+W+ PF NG+ +A CF NGG++VAGNYPY+     +V+TFEM IN C   NGE  FK+ +  T+G +TAYARTLSDGM +N++V    A   YE GKK +++R GQ NF+CA+CH+ NAG  LR+E+LSPAVGQ THWPVFRGGD L TL  RY  C +Q+RAVPFAAGS E N+LEYFHSY+SNGLPM+A+V+RK
Sbjct:   34 VNATPEHDRDSLVKYFKNKYPDVKKDSYIYGALAFDPDAKAQYDSIMDFPPFGSVLDQGKAMWDTPFKNGKKYADCFPNGGKNVAGNYPYFDDKAGKVVTFEMAINACRVQNGEDAFKYNDMKTIGVLTAYARTLSDGMAMNIKVDGSAATAAYEAGKKQFYSRRGQLNFSCATCHVDNAGNRLRSEVLSPAVGQATHWPVFRGGDTLVTLQERYVGCNKQVRAVPFAAGSTEYNDLEYFHSYISNGLPMKAAVFRK 290          
BLAST of mRNA_P-wetherbeei_contig16472.2.1 vs. uniprot
Match: A0A349MR89_9PROT (SoxAX cytochrome complex subunit A n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A349MR89_9PROT)

HSP 1 Score: 325 bits (833), Expect = 4.630e-109
Identity = 147/258 (56.98%), Postives = 190/258 (73.64%), Query Frame = 1
Query:   34 QVPASPEQDRTAFIALYQEKFPSVPLDEYVNGALMLSSDAKSQFDSIMEFPPFQGDIDRGKALWEKPFGNGRNFAGCFANGGRDVAGNYPYYATTLDRVITFEMDINRCLRDNGETEFKFGNKATMGAITAYARTLSDGMRVNVRVPDGGALKKYEQGKKLYFTRMGQYNFACASCHMVNAGKILRTEILSPAVGQTTHWPVFRGGDNLNTLHMRYRRCMEQMRAVPFAAGSEELNNLEYFHSYLSNGLPMRASVYRK 807
            Q   +PE+DR  F++ +    P +P+ +YV+G++MLS+DA +Q+DSIM+FPPFQ  IDRG+ +WE PF NG  FA CF NG  ++AG +P Y   L RVITFEM +N CL  NGE    + +  TMGA++AYAR+LSDGM + + V    A+ KYE GK LYF R+GQYN ACASCH+ N G+  R E+LSP +GQ  H+PVFRGG+ L TL MRY+RCME + AVPF +GSE LNNLEYFHSYLSNGLP+++SVYR+
Sbjct:   18 QAVGTPEEDRAVFLSTFAVNIPGIPVSQYVHGSMMLSTDALNQYDSIMDFPPFQEVIDRGQEIWETPFKNGNTFAECFENGAVNIAGKFPLYNEKLKRVITFEMALNSCLEQNGEMPMNYIDPETMGALSAYARSLSDGMLMQIEVASASAMNKYELGKTLYFRRIGQYNLACASCHLTNGGRYFRDELLSPTIGQAVHFPVFRGGERLYTLQMRYQRCMEAVGAVPFESGSEALNNLEYFHSYLSNGLPLQSSVYRR 275          
BLAST of mRNA_P-wetherbeei_contig16472.2.1 vs. uniprot
Match: A0A512L3V3_9PROT (SoxAX cytochrome complex subunit A n=1 Tax=Sulfuriferula plumbiphila TaxID=171865 RepID=A0A512L3V3_9PROT)

HSP 1 Score: 322 bits (826), Expect = 9.550e-108
Identity = 152/271 (56.09%), Postives = 191/271 (70.48%), Query Frame = 1
Query:    1 LAALATGSTAGQVPAS--PEQDRTAFIALYQEKFPSVPLDEYVNGALMLSSDAKSQFDSIMEFPPFQGDIDRGKALWEKPFGNGRNFAGCFANGGRDVAGNYPYYATTLDRVITFEMDINRCLRDNGETEFKFGNKATMGAITAYARTLSDGMRVNVRVPDGGALKKYEQGKKLYFTRMGQYNFACASCHMVNAGKILRTEILSPAVGQTTHWPVFRGGDNLNTLHMRYRRCMEQMRAVPFAAGSEELNNLEYFHSYLSNGLPMRASVYRK 807
            LA    G   G + AS  PEQDR + +  Y  K+P + +  Y+ GAL    DA  Q++SIM+FPPF   I+ GK +WE PF NG+ +A CF NGG++VAGNYPY+     +V+TFEM IN C   NGE  FK+ +  TMG +TAYARTLSDGM +N++V    A   YE GK  +++R GQ NF+CASCH+ NAG  LR+E+LSPAVGQ THWPVFRGG+ L TL  RY  C +Q+RAVPFA GSEE NNLEYFHSY+SNGLP++ASV+RK
Sbjct:   22 LALAGAGLLLGALNASATPEQDRQSLLKFYSSKYPDIKVANYIYGALAFDPDAMEQYNSIMDFPPFGSVIEHGKKMWETPFKNGKKYADCFPNGGKNVAGNYPYFDDKAGKVVTFEMAINACRTANGEEAFKYNDMQTMGTLTAYARTLSDGMPMNIKVQGAAATAAYEAGKSQFYSRRGQLNFSCASCHVANAGNHLRSELLSPAVGQATHWPVFRGGEQLVTLQERYVGCNKQVRAVPFAPGSEEYNNLEYFHSYISNGLPLKASVFRK 292          
BLAST of mRNA_P-wetherbeei_contig16472.2.1 vs. uniprot
Match: UPI000F608B0F (sulfur oxidation c-type cytochrome SoxA n=1 Tax=Sulfuriferula thiophila TaxID=1781211 RepID=UPI000F608B0F)

HSP 1 Score: 321 bits (823), Expect = 1.580e-107
Identity = 150/271 (55.35%), Postives = 197/271 (72.69%), Query Frame = 1
Query:    1 LAALATGSTAGQVPAS--PEQDRTAFIALYQEKFPSVPLDEYVNGALMLSSDAKSQFDSIMEFPPFQGDIDRGKALWEKPFGNGRNFAGCFANGGRDVAGNYPYYATTLDRVITFEMDINRCLRDNGETEFKFGNKATMGAITAYARTLSDGMRVNVRVPDGGALKKYEQGKKLYFTRMGQYNFACASCHMVNAGKILRTEILSPAVGQTTHWPVFRGGDNLNTLHMRYRRCMEQMRAVPFAAGSEELNNLEYFHSYLSNGLPMRASVYRK 807
            LA ++ G   G V A+  PEQDR + +  Y  K+P + LD+YV GAL   +DA +Q++SIM+FPPF   +D+G+ +W  PF NG+ ++ CFANGG++VAGNYPY+     +V+TFEM IN C   NGE  +K  + ATMG +T+YARTLSDGM +NV+V    A   Y+ GKK +++R GQ  F+CASCH+ NAG  LR+E+LSPA+GQ THWPVFRG + L TL  RY  C +Q+RAVPFA GSEE N+LEYFHSY+SNGLPM+ASV+RK
Sbjct:    6 LALVSAGLLFGTVTANATPEQDRQSLVKYYTNKYPDIKLDQYVYGALAFDADAMAQYESIMDFPPFGTAVDQGQKMWNTPFKNGKTYSSCFANGGKNVAGNYPYFDDKAGKVVTFEMAINDCRTANGEEAYKLADAATMGTLTSYARTLSDGMLMNVKVNGAAAQAAYDTGKKHFYSRRGQLGFSCASCHVENAGNRLRSEVLSPAIGQATHWPVFRGAETLVTLQNRYVGCNKQVRAVPFAVGSEEYNDLEYFHSYISNGLPMKASVFRK 276          
BLAST of mRNA_P-wetherbeei_contig16472.2.1 vs. uniprot
Match: A0A809RZD4_9PROT (SoxAX cytochrome complex subunit A n=1 Tax=Sulfuriferula nivalis TaxID=2675298 RepID=A0A809RZD4_9PROT)

HSP 1 Score: 319 bits (818), Expect = 9.100e-107
Identity = 150/271 (55.35%), Postives = 195/271 (71.96%), Query Frame = 1
Query:    1 LAALATGSTAGQVPAS--PEQDRTAFIALYQEKFPSVPLDEYVNGALMLSSDAKSQFDSIMEFPPFQGDIDRGKALWEKPFGNGRNFAGCFANGGRDVAGNYPYYATTLDRVITFEMDINRCLRDNGETEFKFGNKATMGAITAYARTLSDGMRVNVRVPDGGALKKYEQGKKLYFTRMGQYNFACASCHMVNAGKILRTEILSPAVGQTTHWPVFRGGDNLNTLHMRYRRCMEQMRAVPFAAGSEELNNLEYFHSYLSNGLPMRASVYRK 807
            LA +AT  T G V A+  PEQD+   +  + +K+P + LD+YV GAL    D+ +Q++SIM+FPPF   +D+G+ +WE PF NG+ +A CF NGG++VAGNYPY+    ++V+TFEM IN C   NGE  F   +  T+G +TAYARTLSDGM++N++V    A   YE GK  ++TR GQ  F+CASCH+ +AG  LR+E+LSP VGQ THWPVFRGGDNL TL MRY  C + +RA PF  GSEE NNLEYFHSY+SNGLPM+ASV+RK
Sbjct:    6 LALVATTLTLGAVAANATPEQDKKNLVKYFTQKYPDIKLDQYVYGALAFDKDSMAQYNSIMDFPPFGTVVDQGQKMWETPFKNGKTYASCFPNGGKNVAGNYPYFDDKANKVVTFEMAINECRVSNGEEPFNLSDATTIGRLTAYARTLSDGMKMNIKVKGPKAEAAYEAGKSEFYTRHGQLGFSCASCHVYSAGSRLRSELLSPVVGQATHWPVFRGGDNLVTLQMRYVGCNKLVRATPFKEGSEEYNNLEYFHSYISNGLPMKASVFRK 276          
BLAST of mRNA_P-wetherbeei_contig16472.2.1 vs. uniprot
Match: A0A401JEP8_9PROT (SoxAX cytochrome complex subunit A n=1 Tax=Sulfuriferula multivorans TaxID=1559896 RepID=A0A401JEP8_9PROT)

HSP 1 Score: 318 bits (816), Expect = 3.260e-106
Identity = 145/257 (56.42%), Postives = 188/257 (73.15%), Query Frame = 1
Query:   37 VPASPEQDRTAFIALYQEKFPSVPLDEYVNGALMLSSDAKSQFDSIMEFPPFQGDIDRGKALWEKPFGNGRNFAGCFANGGRDVAGNYPYYATTLDRVITFEMDINRCLRDNGETEFKFGNKATMGAITAYARTLSDGMRVNVRVPDGGALKKYEQGKKLYFTRMGQYNFACASCHMVNAGKILRTEILSPAVGQTTHWPVFRGGDNLNTLHMRYRRCMEQMRAVPFAAGSEELNNLEYFHSYLSNGLPMRASVYRK 807
            V ASPEQDR   +  +  K+P +    YV GAL    DA +Q++SIM+FPPF   +++GK +WE PF NG+ +A CF NGG++VAGNYPY+     +V+TFEM IN C   NGE  +K+ +  TMG +T+YARTLSDGM +N++V    A   YE GK  +++R GQ NF+CASCH+ NAG  LR+E+LSPAVGQ+THWPVFRGG+NL TL  RY  C +Q+RAVPFA GS E N+LEYFHSY+SNGLP++ASV+RK
Sbjct:   37 VSASPEQDRQNLLDFFSSKYPDIKAGNYVYGALAFDPDAMAQYNSIMDFPPFSSVVEQGKKMWETPFKNGKTYASCFPNGGKNVAGNYPYFDDKAGKVVTFEMAINACRTANGEDAYKYNDMKTMGTLTSYARTLSDGMPMNIKVQGPAATAAYEAGKSQFYSRRGQLNFSCASCHVANAGNHLRSEVLSPAVGQSTHWPVFRGGENLVTLQERYVGCNKQVRAVPFAPGSVEYNDLEYFHSYISNGLPLKASVFRK 293          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16472.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00198287C82.590e-15780.77Sulfur oxidation c-type cytochrome SoxA n=1 Tax=Pr... [more]
A0A6F8V797_9PROT1.660e-11660.00SoxAX cytochrome complex subunit A n=1 Tax=Sulfuri... [more]
A0A658BMC2_9PROT1.820e-11358.89SoxAX cytochrome complex subunit A n=1 Tax=Nitroso... [more]
A0A3D0ET32_9PROT2.820e-11056.13SoxAX cytochrome complex subunit A n=1 Tax=Betapro... [more]
A0A3C1MS57_9PROT1.340e-10957.98SoxAX cytochrome complex subunit A n=1 Tax=Betapro... [more]
A0A349MR89_9PROT4.630e-10956.98SoxAX cytochrome complex subunit A n=2 Tax=Betapro... [more]
A0A512L3V3_9PROT9.550e-10856.09SoxAX cytochrome complex subunit A n=1 Tax=Sulfuri... [more]
UPI000F608B0F1.580e-10755.35sulfur oxidation c-type cytochrome SoxA n=1 Tax=Su... [more]
A0A809RZD4_9PROT9.100e-10755.35SoxAX cytochrome complex subunit A n=1 Tax=Sulfuri... [more]
A0A401JEP8_9PROT3.260e-10656.42SoxAX cytochrome complex subunit A n=1 Tax=Sulfuri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16472contigP-wetherbeei_contig16472:223..1032 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog292415.Tbd_0564
Model size810
Max annot lvl119069|Hydrogenophilales
KEGG rclassRC03151,RC03152
KEGG koko:K17222
KEGG ReactionR10151
KEGG Pathwayko00920,ko01100,ko01120,map00920,map01100,map01120
KEGG ModuleM00595
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.16e-107
EggNOG OGsCOG3258@1|root,COG3258@2|Bacteria,1MXB0@1224|Proteobacteria,2VJ8Q@28216|Betaproteobacteria,1KSVE@119069|Hydrogenophilales
DescriptionThiosulfate-oxidizing multienzyme system protein SoxA
Cds size810
COG categoryC
BRITEko00000,ko00001,ko00002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186087.9199467-CDS-P-wetherbeei_contig16472:222..10321683186087.9199467-CDS-P-wetherbeei_contig16472:222..1032Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16472 223..1032 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16472.2.1prot_P-wetherbeei_contig16472.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16472 223..1032 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16472.2.1

>prot_P-wetherbeei_contig16472.2.1 ID=prot_P-wetherbeei_contig16472.2.1|Name=mRNA_P-wetherbeei_contig16472.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=270bp
LAALATGSTAGQVPASPEQDRTAFIALYQEKFPSVPLDEYVNGALMLSSD
AKSQFDSIMEFPPFQGDIDRGKALWEKPFGNGRNFAGCFANGGRDVAGNY
PYYATTLDRVITFEMDINRCLRDNGETEFKFGNKATMGAITAYARTLSDG
MRVNVRVPDGGALKKYEQGKKLYFTRMGQYNFACASCHMVNAGKILRTEI
LSPAVGQTTHWPVFRGGDNLNTLHMRYRRCMEQMRAVPFAAGSEELNNLE
YFHSYLSNGLPMRASVYRK*
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mRNA from alignment at P-wetherbeei_contig16472:223..1032+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16472.2.1 ID=mRNA_P-wetherbeei_contig16472.2.1|Name=mRNA_P-wetherbeei_contig16472.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig16472:223..1032+ (Phaeothamnion wetherbeei SAG_119_79)
CTCGCCGCGTTGGCCACAGGCAGCACGGCGGGGCAAGTGCCAGCGTCTCC GGAGCAGGACCGCACGGCGTTCATCGCCCTGTACCAAGAGAAATTCCCCA GCGTGCCGCTGGACGAGTACGTCAACGGCGCGCTGATGCTGTCGAGTGAT GCGAAATCCCAGTTCGACAGCATCATGGAATTTCCTCCATTTCAGGGCGA TATCGACAGAGGCAAGGCACTGTGGGAAAAGCCGTTTGGGAATGGAAGAA ACTTCGCTGGTTGTTTCGCCAATGGCGGCCGCGACGTCGCCGGCAATTAT CCCTACTACGCGACCACCCTCGACCGTGTCATCACTTTTGAAATGGACAT CAATCGCTGCCTGCGCGACAACGGCGAGACGGAGTTCAAATTCGGCAACA AAGCGACCATGGGCGCCATTACCGCATATGCGCGCACTCTTTCCGATGGC ATGCGGGTCAATGTCCGGGTGCCGGATGGGGGCGCGCTTAAAAAATACGA ACAAGGCAAGAAGCTATATTTCACGCGCATGGGTCAATACAATTTCGCCT GTGCGTCCTGCCATATGGTCAACGCCGGAAAGATCCTACGCACGGAGATT CTTTCGCCTGCGGTCGGACAGACCACGCACTGGCCGGTCTTTCGCGGCGG CGACAATTTGAATACGCTCCACATGCGTTACCGGCGCTGCATGGAGCAGA TGCGTGCAGTGCCGTTTGCGGCAGGCAGTGAAGAGCTCAACAATCTTGAG TATTTTCACTCGTATCTCAGCAATGGCCTGCCCATGCGCGCGTCGGTTTA TCGCAAGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16472:223..1032+

>mRNA_P-wetherbeei_contig16472.2.1 ID=mRNA_P-wetherbeei_contig16472.2.1|Name=mRNA_P-wetherbeei_contig16472.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig16472:223..1032+ (Phaeothamnion wetherbeei SAG_119_79)
CTCGCCGCGTTGGCCACAGGCAGCACGGCGGGGCAAGTGCCAGCGTCTCC
GGAGCAGGACCGCACGGCGTTCATCGCCCTGTACCAAGAGAAATTCCCCA
GCGTGCCGCTGGACGAGTACGTCAACGGCGCGCTGATGCTGTCGAGTGAT
GCGAAATCCCAGTTCGACAGCATCATGGAATTTCCTCCATTTCAGGGCGA
TATCGACAGAGGCAAGGCACTGTGGGAAAAGCCGTTTGGGAATGGAAGAA
ACTTCGCTGGTTGTTTCGCCAATGGCGGCCGCGACGTCGCCGGCAATTAT
CCCTACTACGCGACCACCCTCGACCGTGTCATCACTTTTGAAATGGACAT
CAATCGCTGCCTGCGCGACAACGGCGAGACGGAGTTCAAATTCGGCAACA
AAGCGACCATGGGCGCCATTACCGCATATGCGCGCACTCTTTCCGATGGC
ATGCGGGTCAATGTCCGGGTGCCGGATGGGGGCGCGCTTAAAAAATACGA
ACAAGGCAAGAAGCTATATTTCACGCGCATGGGTCAATACAATTTCGCCT
GTGCGTCCTGCCATATGGTCAACGCCGGAAAGATCCTACGCACGGAGATT
CTTTCGCCTGCGGTCGGACAGACCACGCACTGGCCGGTCTTTCGCGGCGG
CGACAATTTGAATACGCTCCACATGCGTTACCGGCGCTGCATGGAGCAGA
TGCGTGCAGTGCCGTTTGCGGCAGGCAGTGAAGAGCTCAACAATCTTGAG
TATTTTCACTCGTATCTCAGCAATGGCCTGCCCATGCGCGCGTCGGTTTA
TCGCAAGTAA
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