mRNA_P-wetherbeei_contig16468.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16468.1.1
Unique NamemRNA_P-wetherbeei_contig16468.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16468.1.1 vs. uniprot
Match: A0A2E3XET5_9PROT (Lactamase_B domain-containing protein n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A2E3XET5_9PROT)

HSP 1 Score: 370 bits (950), Expect = 3.610e-127
Identity = 166/251 (66.14%), Postives = 206/251 (82.07%), Query Frame = 1
Query:    1 IMPREIAPGVWWLGDCLEQHFKGKIYHGYNAAFMVVGSQASILIDTGHPKDFPVVERHMRTILDKHPGSPLTHLFLTHQETPHSGGLGRVLASYPEIVVCGDMSDYHMAFPQYAHLLKFMREGDEVDLGGRKFILAEPVIRDLRTSYWGFDTGTRCLFPGDGFAYSHYHWDGHCGMIAEEAQSLDLTDVCAVFQERALFWTTFVDMDRYVERLEWLMDKLNVQIVAPSHGLPVTDLPRTYPAIRKGLLAGQ 753
            ++PREIAPGV+WLGDCLEQ F+GKIYH YNAA+++VGS+AS+L++TGHPKDFP++E+ M  +L      PL +LF+THQETPHSGGLGR++  Y ++ + GD+SDYH+AFP+YA  L+ M  GD +DLG RKF+ AEPVIRDLRTS WGFDT  R LFPGDGFAYSHYHWDGHCG IAEEA+SLDL DV AVF ERAL+WT F DM+ YVERL+ L+ +L+V I+AP+HGLPV DL +T P   +GLLAG+
Sbjct:    6 LLPREIAPGVFWLGDCLEQPFRGKIYHSYNAAYLIVGSEASLLVETGHPKDFPLIEKQMSDVLSNSNAPPLKYLFITHQETPHSGGLGRLIRKYSDLTIHGDISDYHLAFPEYAERLRPMEVGDFIDLGDRKFLAAEPVIRDLRTSLWGFDTNHRVLFPGDGFAYSHYHWDGHCGQIAEEAKSLDLIDVSAVFAERALYWTMFADMNVYVERLKSLLVELDVSIIAPTHGLPVLDLEKTVPLAMEGLLAGR 256          
BLAST of mRNA_P-wetherbeei_contig16468.1.1 vs. uniprot
Match: A0A2S6QIM6_9PROT (Lactamase_B domain-containing protein n=1 Tax=Alphaproteobacteria bacterium MarineAlpha12_Bin1 TaxID=2013107 RepID=A0A2S6QIM6_9PROT)

HSP 1 Score: 369 bits (946), Expect = 1.410e-126
Identity = 163/250 (65.20%), Postives = 207/250 (82.80%), Query Frame = 1
Query:    4 MPREIAPGVWWLGDCLEQHFKGKIYHGYNAAFMVVGSQASILIDTGHPKDFPVVERHMRTILDKHPGSPLTHLFLTHQETPHSGGLGRVLASYPEIVVCGDMSDYHMAFPQYAHLLKFMREGDEVDLGGRKFILAEPVIRDLRTSYWGFDTGTRCLFPGDGFAYSHYHWDGHCGMIAEEAQSLDLTDVCAVFQERALFWTTFVDMDRYVERLEWLMDKLNVQIVAPSHGLPVTDLPRTYPAIRKGLLAGQ 753
            +PRE+APGV+WLGDCLEQ FKGKIYH YNAAF+V+GS++S+L++TGHPKDFP++E+ M  +L     +PL HLFLTHQETPHSGGLGR+L  +PE+ + GD+SDYH+AFP+YA +L+ M  GD +DLG R F+ AEPV+RD+RTS WGFD+G + LFPGDGFAYSHYHWDGHCG IAEEA+SLDL DV AVF ERAL+WT FVDM+ YVER+  L+++L V+ +AP+HGLP+ DL  T P   +GLL+G+
Sbjct:    7 LPRELAPGVFWLGDCLEQPFKGKIYHAYNAAFLVIGSKSSLLVETGHPKDFPLIEKQMSDVLSNK-NAPLRHLFLTHQETPHSGGLGRMLRRFPELTIHGDISDYHLAFPEYADILRPMEVGDSIDLGDRLFVAAEPVVRDMRTSLWGFDSGEKVLFPGDGFAYSHYHWDGHCGQIAEEAESLDLKDVSAVFAERALYWTMFVDMNIYVERMYALLNELGVKAIAPTHGLPILDLETTVPLAMEGLLSGR 255          
BLAST of mRNA_P-wetherbeei_contig16468.1.1 vs. uniprot
Match: UPI00131C26D7 (MBL fold metallo-hydrolase n=1 Tax=Bradyrhizobium sp. S69 TaxID=1641856 RepID=UPI00131C26D7)

HSP 1 Score: 368 bits (945), Expect = 1.810e-126
Identity = 165/249 (66.27%), Postives = 207/249 (83.13%), Query Frame = 1
Query:    4 MPREIAPGVWWLGDCLEQHFKGKIYHGYNAAFMVVGSQASILIDTGHPKDFPVVERHMRTILDKHPGSPLTHLFLTHQETPHSGGLGRVLASYPEIVVCGDMSDYHMAFPQYAHLLKFMREGDEVDLGGRKFILAEPVIRDLRTSYWGFDTGTRCLFPGDGFAYSHYHWDGHCGMIAEEAQSLDLTDVCAVFQERALFWTTFVDMDRYVERLEWLMDKLNVQIVAPSHGLPVTDLPRTYPAIRKGLLAG 750
            MPRE+A GV+WLGDCLEQ  KGKIYH YNAAF++ G++AS+LI+TGHPKDFP++ER +R +L     +PL +LF+THQETPHSGGLGRVLA YPE ++CGDMSDYH+AFPQ+A  +  M  GDE+DLGGR F+  EPVIRDLRT++WGFD+  R LFPGDGFAYSHYH DGHCG++AEEA SLDL DV AVF +RALFWT F DM  YV+RL+WL D+L+V+ +AP+HGLP+ ++P+T P +++GLL G
Sbjct:    8 MPRELADGVFWLGDCLEQRAKGKIYHSYNAAFLLCGTEASMLIETGHPKDFPIIERQLRGLLAGR--APLKYLFVTHQETPHSGGLGRVLARYPEAILCGDMSDYHLAFPQFADRMLPMISGDEIDLGGRTFVAVEPVIRDLRTTWWGFDSKERVLFPGDGFAYSHYHEDGHCGLLAEEAISLDLADVSAVFADRALFWTKFTDMKLYVDRLQWLCDRLDVKAIAPTHGLPILNVPKTMPRLQEGLLYG 254          
BLAST of mRNA_P-wetherbeei_contig16468.1.1 vs. uniprot
Match: A0A848W4B2_9PROT (Lactamase_B domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W4B2_9PROT)

HSP 1 Score: 367 bits (942), Expect = 5.950e-126
Identity = 162/250 (64.80%), Postives = 206/250 (82.40%), Query Frame = 1
Query:    4 MPREIAPGVWWLGDCLEQHFKGKIYHGYNAAFMVVGSQASILIDTGHPKDFPVVERHMRTILDKHPGSPLTHLFLTHQETPHSGGLGRVLASYPEIVVCGDMSDYHMAFPQYAHLLKFMREGDEVDLGGRKFILAEPVIRDLRTSYWGFDTGTRCLFPGDGFAYSHYHWDGHCGMIAEEAQSLDLTDVCAVFQERALFWTTFVDMDRYVERLEWLMDKLNVQIVAPSHGLPVTDLPRTYPAIRKGLLAGQ 753
            +PRE+APGV+WLGDCLEQ F+GK+YH YN+AF++VG++AS+LI+T HPKDFPV+E+ M  +L     +PL HLF+THQETPHSGGLGRVL  YP++ + GD+SDYH+AFP+Y HLL+ M  GD +DLGGR+F+  EPVIRDLRTS WGFDTG R LFPGDGFAYSHYHWDGHCG +AEEA+SLDL DV AVF ERAL+WT F DM+ YV++L+ L+  ++V ++AP+HGLP+ +L  T P   +GLLAG+
Sbjct:    7 LPRELAPGVFWLGDCLEQPFRGKVYHSYNSAFLIVGTEASMLIETAHPKDFPVLEQQMDKVLSNGT-APLKHLFITHQETPHSGGLGRVLRRYPDLTIHGDISDYHLAFPEYVHLLQPMEVGDAIDLGGRQFVATEPVIRDLRTSMWGFDTGQRVLFPGDGFAYSHYHWDGHCGQVAEEAESLDLVDVSAVFAERALYWTMFADMEIYVDKLQQLLVDMDVAVIAPTHGLPILNLEVTVPKAMEGLLAGK 255          
BLAST of mRNA_P-wetherbeei_contig16468.1.1 vs. uniprot
Match: A0A845CAW0_9BACT (Lactamase_B domain-containing protein n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A845CAW0_9BACT)

HSP 1 Score: 363 bits (933), Expect = 6.440e-125
Identity = 165/249 (66.27%), Postives = 201/249 (80.72%), Query Frame = 1
Query:    4 MPREIAPGVWWLGDCLEQHFKGKIYHGYNAAFMVVGSQASILIDTGHPKDFPVVERHMRTILDKHPGSPLTHLFLTHQETPHSGGLGRVLASYPEIVVCGDMSDYHMAFPQYAHLLKFMREGDEVDLGGRKFILAEPVIRDLRTSYWGFDTGTRCLFPGDGFAYSHYHWDGHCGMIAEEAQSLDLTDVCAVFQERALFWTTFVDMDRYVERLEWLMDKLNVQIVAPSHGLPVTDLPRTYPAIRKGLLAG 750
            +PRE++PGV+WLGDCL QH +GK YH YNAAF+V+GS+AS+L++TGHPKDFPV+ER MR IL +  G PL HLFLTHQETPHSGGLGRVL  YP++ + GDM DYH+AFPQ+    K MR GD +DLG  +F+  EPVIRDLR+S WGF+T  R LFPGDGFAYSHYH DGHCG+ AEEA SLDL DV  VF ERALFWTTF DM+ Y ++LE LMD+L V++VAP+HGLP+ D+ RT P +R+GL+ G
Sbjct:    5 LPREVSPGVFWLGDCLVQHSQGKTYHSYNAAFLVIGSEASMLVETGHPKDFPVIERQMRDILARG-GGPLKHLFLTHQETPHSGGLGRVLDRYPDLTIHGDMCDYHLAFPQHEGRFKEMRVGDAIDLGDTQFMAVEPVIRDLRSSLWGFETKGRVLFPGDGFAYSHYHTDGHCGLFAEEATSLDLVDVLGVFAERALFWTTFTDMNIYADKLEELMDELGVRVVAPTHGLPIRDIERTMPKVREGLIRG 252          
BLAST of mRNA_P-wetherbeei_contig16468.1.1 vs. uniprot
Match: A0A355B3A4_9BACT (Lactamase_B domain-containing protein n=1 Tax=Nitrospinae bacterium TaxID=2026769 RepID=A0A355B3A4_9BACT)

HSP 1 Score: 363 bits (933), Expect = 6.910e-125
Identity = 166/249 (66.67%), Postives = 201/249 (80.72%), Query Frame = 1
Query:    4 MPREIAPGVWWLGDCLEQHFKGKIYHGYNAAFMVVGSQASILIDTGHPKDFPVVERHMRTILDKHPGSPLTHLFLTHQETPHSGGLGRVLASYPEIVVCGDMSDYHMAFPQYAHLLKFMREGDEVDLGGRKFILAEPVIRDLRTSYWGFDTGTRCLFPGDGFAYSHYHWDGHCGMIAEEAQSLDLTDVCAVFQERALFWTTFVDMDRYVERLEWLMDKLNVQIVAPSHGLPVTDLPRTYPAIRKGLLAG 750
            +PREI+PGV+WLGDCLEQH KGKIYH YNAAF+VVGS AS+L++TGHPKDFP +ER M+ IL +  GSPL  LF+THQETPHSGGLGR+L  YP + V GD+SDYH+AFP++A  L+ M  GD +DLG R+F+  EPV+RDLR+S WG DT  R LFPGDGFAYSHYHWDGHCG +AEEA SL+L D  AVF ERALFWT F DM  YV++LE L++ L++ +VAP+HGLP+ DLP T P +R GLLAG
Sbjct:    7 LPREISPGVFWLGDCLEQHHKGKIYHSYNAAFLVVGSGASLLVETGHPKDFPEIERQMKEILAQK-GSPLKFLFITHQETPHSGGLGRMLELYPGLTVHGDVSDYHLAFPRHAGRLRSMEVGDAIDLGDRQFVAVEPVVRDLRSSLWGLDTSGRVLFPGDGFAYSHYHWDGHCGKVAEEATSLNLADASAVFAERALFWTKFTDMKIYVDKLEELLEDLDIAVVAPTHGLPILDLPVTIPKVRAGLLAG 254          
BLAST of mRNA_P-wetherbeei_contig16468.1.1 vs. uniprot
Match: A0A2E8XTA7_9PROT (Lactamase_B domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XTA7_9PROT)

HSP 1 Score: 363 bits (932), Expect = 1.250e-124
Identity = 165/248 (66.53%), Postives = 204/248 (82.26%), Query Frame = 1
Query:    4 MPREIAPGVWWLGDCLEQHFKGKIYHGYNAAFMVVGSQASILIDTGHPKDFPVVERHMRTILDKHPGSPLTHLFLTHQETPHSGGLGRVLASYPEIVVCGDMSDYHMAFPQYAHLLKFMREGDEVDLGGRKFILAEPVIRDLRTSYWGFDTGTRCLFPGDGFAYSHYHWDGHCGMIAEEAQSLDLTDVCAVFQERALFWTTFVDMDRYVERLEWLMDKLNVQIVAPSHGLPVTDLPRTYPAIRKGLLA 747
            +PR+IAPGV+WLGDCLEQ ++G+ YH YNAAF+V GS+AS+L++TGHPKDFP +ER +  +L     +P+ HLF+THQETPHSGGLGRV  ++P+I V GD++DYH+AFPQ+A  L  M  GDE+DL GRKF+  EPVIRDLRTS WGFDTG +CLFPGDGFAYSHYHWDGHCG++AEEA SLDL DV AVF ERALFWTT  DM+ YV+RLE L+ +L V+I+AP+HGLPVTD+  T P +R GL+A
Sbjct:    7 LPRQIAPGVFWLGDCLEQEYQGREYHSYNAAFLVCGSEASMLVETGHPKDFPEIERQIIELLASG-HAPIKHLFITHQETPHSGGLGRVFQNWPDITVHGDVADYHLAFPQHADRLVPMEVGDEIDLCGRKFVAVEPVIRDLRTSLWGFDTGAKCLFPGDGFAYSHYHWDGHCGLVAEEATSLDLQDVLAVFAERALFWTTTTDMNIYVDRLESLIKELGVEIIAPTHGLPVTDIAVTMPKVRGGLIA 253          
BLAST of mRNA_P-wetherbeei_contig16468.1.1 vs. uniprot
Match: A0A2D9WFD9_9PROT (Lactamase_B domain-containing protein n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A2D9WFD9_9PROT)

HSP 1 Score: 363 bits (931), Expect = 1.600e-124
Identity = 166/248 (66.94%), Postives = 200/248 (80.65%), Query Frame = 1
Query:    4 MPREIAPGVWWLGDCLEQHFKGKIYHGYNAAFMVVGSQASILIDTGHPKDFPVVERHMRTILDKHPGSPLTHLFLTHQETPHSGGLGRVLASYPEIVVCGDMSDYHMAFPQYAHLLKFMREGDEVDLGGRKFILAEPVIRDLRTSYWGFDTGTRCLFPGDGFAYSHYHWDGHCGMIAEEAQSLDLTDVCAVFQERALFWTTFVDMDRYVERLEWLMDKLNVQIVAPSHGLPVTDLPRTYPAIRKGLLA 747
            +PREIAPG++WLGDCLEQ  KG  YH YNAAF++ G+++SILI+TGHPKDFP +ER M  IL  H   PL HLF+THQETPHSGGLGRVL ++P I V GD++DYH+AFP +   LK M  GD++D+GGR+ I  EPVIRDLRTS W FDTG   LFPGDGFAYSHYHWDGHCG +AEEA+SLDL DV AVF ERAL+WTT  DM+ YV++LE LMD+L V+IVAP+HGLPVTDL  T P +R+GL++
Sbjct:    7 LPREIAPGIFWLGDCLEQQHKGMTYHSYNAAFLLTGNESSILIETGHPKDFPEIERQMVEILS-HDQPPLKHLFITHQETPHSGGLGRVLQNWPNITVHGDVADYHLAFPNHKSQLKNMEVGDKIDIGGRQLIAVEPVIRDLRTSLWAFDTGANTLFPGDGFAYSHYHWDGHCGRVAEEAESLDLKDVLAVFAERALYWTTTTDMNIYVDKLEELMDELKVEIVAPTHGLPVTDLAATMPKVREGLIS 253          
BLAST of mRNA_P-wetherbeei_contig16468.1.1 vs. uniprot
Match: A0A1Q7BI35_9PROT (Lactamase_B domain-containing protein n=2 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7BI35_9PROT)

HSP 1 Score: 360 bits (925), Expect = 1.860e-123
Identity = 160/248 (64.52%), Postives = 201/248 (81.05%), Query Frame = 1
Query:    4 MPREIAPGVWWLGDCLEQHFKGKIYHGYNAAFMVVGSQASILIDTGHPKDFPVVERHMRTILDKHPGSPLTHLFLTHQETPHSGGLGRVLASYPEIVVCGDMSDYHMAFPQYAHLLKFMREGDEVDLGGRKFILAEPVIRDLRTSYWGFDTGTRCLFPGDGFAYSHYHWDGHCGMIAEEAQSLDLTDVCAVFQERALFWTTFVDMDRYVERLEWLMDKLNVQIVAPSHGLPVTDLPRTYPAIRKGLLA 747
            MPREIAPGV+W+GDCL Q  KGKIYHGYNAAF+V G  AS L++TGHPKDFPV+ERHM  +  +   +PL +LF+THQETPH GGLGR+L ++PE ++CGD+SDYH+AFPQY H ++ M+EGDE+DLGGR  +  EPVIRDLRT++WGFDT  R LFPGDGFAYSHYH DGHCG++AEEA SLDL DV AVF + ALFWT F +MD Y +RL+ L+++L V+ +AP+HGLP+TD+  T P ++ GL A
Sbjct:    5 MPREIAPGVFWIGDCLAQRHKGKIYHGYNAAFLVAGKTASCLVETGHPKDFPVIERHMNELFARGV-APLKYLFVTHQETPHCGGLGRILKAHPEAILCGDVSDYHLAFPQYEHRMRSMKEGDEIDLGGRTLMAVEPVIRDLRTTWWGFDTRERVLFPGDGFAYSHYHEDGHCGLVAEEAVSLDLPDVSAVFADLALFWTKFANMDAYCDRLDHLIERLGVKTIAPTHGLPITDVKVTVPKVKAGLKA 251          
BLAST of mRNA_P-wetherbeei_contig16468.1.1 vs. uniprot
Match: A0A0S1Y7U3_9BORD (Lactamase_B domain-containing protein n=5 Tax=Alcaligenaceae TaxID=506 RepID=A0A0S1Y7U3_9BORD)

HSP 1 Score: 361 bits (926), Expect = 2.140e-123
Identity = 167/249 (67.07%), Postives = 200/249 (80.32%), Query Frame = 1
Query:    4 MPREIAPGVWWLGDCLEQHFKGKIYHGYNAAFMVVGSQASILIDTGHPKDFPVVERHMRTILDKHPGSPLTHLFLTHQETPHSGGLGRVLASYPEIVVCGDMSDYHMAFPQYAHLLKFMREGDEVDLGGRKFILAEPVIRDLRTSYWGFDTGTRCLFPGDGFAYSHYHWDGHCGMIAEEAQSLDLTDVCAVFQERALFWTTFVDMDRYVERLEWLMDKLNVQIVAPSHGLPVTDLPRTYPAIRKGLLAG 750
            MPRE+APGV+WLGDCLEQ   GKIYH YNAAF+V+G  AS+LI+TGHPKDFP++   M ++L     +PL HLF+THQETPHSGGLGRVL  YPE VVCGD+ DYH+AFPQYA  L+ MR GD+VDLGGR F L EPVIRDLRT++WGFD   R LFPGDGFAYSHYH DGHCG  AEEA SLD+ +V AVF +RALFWT F DM+ YV+RL+WL+D L+V+++AP+HGLP+ D   T P I++GLL G
Sbjct:    8 MPRELAPGVFWLGDCLEQQANGKIYHTYNAAFLVIGDTASMLIETGHPKDFPLINAQMESLLAGK--APLKHLFVTHQETPHSGGLGRVLHRYPEAVVCGDICDYHLAFPQYAQRLRDMRGGDKVDLGGRVFELVEPVIRDLRTTWWGFDHKARVLFPGDGFAYSHYHEDGHCGHFAEEAISLDIPEVSAVFADRALFWTKFTDMNIYVDRLQWLLDTLDVKVIAPTHGLPILDPRSTVPKIKEGLLYG 254          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16468.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E3XET5_9PROT3.610e-12766.14Lactamase_B domain-containing protein n=2 Tax=Rhod... [more]
A0A2S6QIM6_9PROT1.410e-12665.20Lactamase_B domain-containing protein n=1 Tax=Alph... [more]
UPI00131C26D71.810e-12666.27MBL fold metallo-hydrolase n=1 Tax=Bradyrhizobium ... [more]
A0A848W4B2_9PROT5.950e-12664.80Lactamase_B domain-containing protein n=1 Tax=Alph... [more]
A0A845CAW0_9BACT6.440e-12566.27Lactamase_B domain-containing protein n=1 Tax=Nitr... [more]
A0A355B3A4_9BACT6.910e-12566.67Lactamase_B domain-containing protein n=1 Tax=Nitr... [more]
A0A2E8XTA7_9PROT1.250e-12466.53Lactamase_B domain-containing protein n=1 Tax=Alph... [more]
A0A2D9WFD9_9PROT1.600e-12466.94Lactamase_B domain-containing protein n=2 Tax=Rhod... [more]
A0A1Q7BI35_9PROT1.860e-12364.52Lactamase_B domain-containing protein n=2 Tax=uncl... [more]
A0A0S1Y7U3_9BORD2.140e-12367.07Lactamase_B domain-containing protein n=5 Tax=Alca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16468contigP-wetherbeei_contig16468:761..1513 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1380386.JIAW01000005_gene1365
PFAMsLactamase_B
Model size753
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.35e-67
EggNOG OGsCOG0426@1|root,COG0426@2|Bacteria
Descriptionnitric oxide reductase activity
Cds size750
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186087.8096664-CDS-P-wetherbeei_contig16468:760..15101683186087.8096664-CDS-P-wetherbeei_contig16468:760..1510Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16468 761..1510 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186087.8202512-UTR-P-wetherbeei_contig16468:1510..15131683186087.8202512-UTR-P-wetherbeei_contig16468:1510..1513Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig16468 1511..1513 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16468.1.1prot_P-wetherbeei_contig16468.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16468 761..1510 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16468.1.1

>prot_P-wetherbeei_contig16468.1.1 ID=prot_P-wetherbeei_contig16468.1.1|Name=mRNA_P-wetherbeei_contig16468.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=250bp
MPREIAPGVWWLGDCLEQHFKGKIYHGYNAAFMVVGSQASILIDTGHPKD
FPVVERHMRTILDKHPGSPLTHLFLTHQETPHSGGLGRVLASYPEIVVCG
DMSDYHMAFPQYAHLLKFMREGDEVDLGGRKFILAEPVIRDLRTSYWGFD
TGTRCLFPGDGFAYSHYHWDGHCGMIAEEAQSLDLTDVCAVFQERALFWT
TFVDMDRYVERLEWLMDKLNVQIVAPSHGLPVTDLPRTYPAIRKGLLAGQ
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mRNA from alignment at P-wetherbeei_contig16468:761..1513-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16468.1.1 ID=mRNA_P-wetherbeei_contig16468.1.1|Name=mRNA_P-wetherbeei_contig16468.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig16468:761..1513- (Phaeothamnion wetherbeei SAG_119_79)
ATCATGCCGCGCGAGATCGCGCCGGGCGTGTGGTGGCTCGGCGACTGCCT CGAGCAGCACTTCAAGGGCAAAATCTACCACGGCTACAATGCTGCATTCA TGGTTGTCGGGTCGCAGGCCTCGATCTTGATCGACACCGGGCATCCCAAG GACTTCCCGGTGGTCGAGCGGCACATGCGCACGATCCTCGACAAGCACCC CGGCAGCCCGCTCACACATCTGTTTCTCACGCACCAGGAGACGCCCCATT CAGGCGGCCTCGGCCGTGTGCTGGCCAGCTATCCCGAGATTGTCGTGTGC GGGGACATGAGTGACTACCACATGGCGTTCCCGCAATATGCCCACCTTCT GAAGTTCATGCGAGAAGGCGACGAGGTTGACCTGGGTGGTCGGAAGTTCA TACTGGCGGAGCCGGTGATCCGTGATCTCAGGACCTCCTATTGGGGCTTC GACACCGGGACCCGCTGCCTGTTTCCCGGCGACGGGTTTGCCTACAGTCA TTACCACTGGGACGGTCATTGCGGCATGATCGCGGAGGAAGCCCAGTCGC TCGATCTTACGGACGTGTGCGCCGTGTTCCAGGAGCGCGCTTTGTTCTGG ACCACGTTCGTCGACATGGACCGCTACGTCGAGCGTCTCGAATGGCTCAT GGATAAGTTGAACGTGCAGATCGTGGCCCCGAGCCATGGCTTGCCCGTCA CCGATCTGCCGAGGACCTATCCCGCAATAAGAAAGGGCTTGCTGGCGGGC CAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16468:761..1513-

>mRNA_P-wetherbeei_contig16468.1.1 ID=mRNA_P-wetherbeei_contig16468.1.1|Name=mRNA_P-wetherbeei_contig16468.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=750bp|location=Sequence derived from alignment at P-wetherbeei_contig16468:761..1513- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGCGCGAGATCGCGCCGGGCGTGTGGTGGCTCGGCGACTGCCTCGA
GCAGCACTTCAAGGGCAAAATCTACCACGGCTACAATGCTGCATTCATGG
TTGTCGGGTCGCAGGCCTCGATCTTGATCGACACCGGGCATCCCAAGGAC
TTCCCGGTGGTCGAGCGGCACATGCGCACGATCCTCGACAAGCACCCCGG
CAGCCCGCTCACACATCTGTTTCTCACGCACCAGGAGACGCCCCATTCAG
GCGGCCTCGGCCGTGTGCTGGCCAGCTATCCCGAGATTGTCGTGTGCGGG
GACATGAGTGACTACCACATGGCGTTCCCGCAATATGCCCACCTTCTGAA
GTTCATGCGAGAAGGCGACGAGGTTGACCTGGGTGGTCGGAAGTTCATAC
TGGCGGAGCCGGTGATCCGTGATCTCAGGACCTCCTATTGGGGCTTCGAC
ACCGGGACCCGCTGCCTGTTTCCCGGCGACGGGTTTGCCTACAGTCATTA
CCACTGGGACGGTCATTGCGGCATGATCGCGGAGGAAGCCCAGTCGCTCG
ATCTTACGGACGTGTGCGCCGTGTTCCAGGAGCGCGCTTTGTTCTGGACC
ACGTTCGTCGACATGGACCGCTACGTCGAGCGTCTCGAATGGCTCATGGA
TAAGTTGAACGTGCAGATCGTGGCCCCGAGCCATGGCTTGCCCGTCACCG
ATCTGCCGAGGACCTATCCCGCAATAAGAAAGGGCTTGCTGGCGGGCCAG
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