mRNA_P-wetherbeei_contig16454.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16454.2.1
Unique NamemRNA_P-wetherbeei_contig16454.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16454.2.1 vs. uniprot
Match: A0A1J5QFX8_9ZZZZ (Integrase core domain protein n=3 Tax=root TaxID=1 RepID=A0A1J5QFX8_9ZZZZ)

HSP 1 Score: 602 bits (1552), Expect = 1.490e-215
Identity = 289/359 (80.50%), Postives = 316/359 (88.02%), Query Frame = 1
Query:   16 MHERTKFKLRPKDRASLEAAVANRNSPQKHVWRARIVLLTAAGHGTAEIMQRTGKSKTVIWRWQERFGAEGAEGLWRDKTRPSRIPPLDPTIAERVVALTLGGPPPAATHWTGAALAAEVGISVSSVQRIWRAHGLQPHRVRQFKLSNDPEFAAKLHDIVGLYVNPPDHAIVLSLDEKSQIQALDRTQPGLPMKKGRAGTMTHDYKRHGTTTLFAALDVLAGKVIGQCMKRHRHQEFIRFLNAIDAKVPAKKAIHVIVDNYATHKHPKVMAWLARHPRFTFHFTPKSASWLNAVEGLFAKLAKQSLKRGVFRSVDELKAAIHRFLAQTNATPKPFTWTKDPNKIIAAVKRGHQVLDSIH 1092
            MH+RT  +L   DR+ L+A VANRNSPQKHVWRA+I+LLTA G GT EIMQ TGK+KTVIWRWQERF  EGA GLWRDKTR SRIPPL P +A+RVVALTL G PPAA+HWTG+A+A   GISVSSVQRIWRAHGLQPHRVRQFKLSNDP+FAAKLH+IVGLY++PPDHAIVLS+DEKSQIQALDRTQPGLPMKKGRAGTMTHDY+RHG TTLFAA DVL GK+IG+CMKRHRHQEFIRFLN I+A+VP KK IH+IVDNYATHKHP VM WL +H RF FHFTP SASWLNA+EG FAKL K+ LKRGVFRS+ ELK AIHRFL   NA PKPFTWTKDPNKIIAAVKRGHQVLDSIH
Sbjct:    1 MHKRTNIQLSRADRSKLKAVVANRNSPQKHVWRAKIILLTADGRGTTEIMQATGKAKTVIWRWQERFHDEGAAGLWRDKTRRSRIPPLSPEVAKRVVALTLAGLPPAASHWTGSAMAKAAGISVSSVQRIWRAHGLQPHRVRQFKLSNDPQFAAKLHEIVGLYIDPPDHAIVLSVDEKSQIQALDRTQPGLPMKKGRAGTMTHDYERHGVTTLFAAFDVLEGKIIGRCMKRHRHQEFIRFLNVIEARVPKKKTIHIIVDNYATHKHPDVMLWLEKHRRFVFHFTPTSASWLNAIEGFFAKLTKKRLKRGVFRSLRELKDAIHRFLDDANANPKPFTWTKDPNKIIAAVKRGHQVLDSIH 359          
BLAST of mRNA_P-wetherbeei_contig16454.2.1 vs. uniprot
Match: A8TJ44_9PROT (Amidase n=7 Tax=alpha proteobacterium BAL199 TaxID=331869 RepID=A8TJ44_9PROT)

HSP 1 Score: 553 bits (1426), Expect = 2.370e-196
Identity = 271/354 (76.55%), Postives = 303/354 (85.59%), Query Frame = 1
Query:   34 FKLRPKDRASLEAAVANRNSPQKHVWRARIVLLTAAGHGTAEIMQRTGKSKTVIWRWQERFGAEGAEGLWRDKTRPSRIPPLDPTIAERVVALTLGGPPPAATHWTGAALAAEVGISVSSVQRIWRAHGLQPHRVRQFKLSNDPEFAAKLHDIVGLYVNPPDHAIVLSLDEKSQIQALDRTQPGLPMKKGRAGTMTHDYKRHGTTTLFAALDVLAGKVIGQCMKRHRHQEFIRFLNAIDAKVPAKKAIHVIVDNYATHKHPKVMAWLARHPRFTFHFTPKSASWLNAVEGLFAKLAKQSLKRGVFRSVDELKAAIHRFLAQTNAT-PKPFTWTKDPNKIIAAVKRGHQVLDSIH 1092
            F +   DRA LEA VA+RNSPQKHVWR RIVLLTAAG GT  IM+  G +KT +WRWQERF AEG +GL RDKTRPSRIPPLDP++AERVVALTL  PP   THWT A +AA+ GISVSSVQRIWRAHGL PHR+RQFKLSNDPEF  KL D+VGLYV+PP HAIVLS+DEKSQIQALDRTQPGLP+KKGRAGTMTHDYKRHGTTTLFAAL+VL G VIG+ M+RHRHQEFIRFLN I+A+VPA K IH ++DNYA HKHPKV AWL RHPR+TFHF P S SWLNAVEG FA+LAK+ LKRGVFRSV +L+AAI+RFL + NA+ PKPF WT DP+KIIAAV+RGHQVLDSIH
Sbjct:    7 FTVSTADRARLEAIVADRNSPQKHVWRCRIVLLTAAGLGTNAIMREAGVAKTAVWRWQERFAAEGVDGLLRDKTRPSRIPPLDPSVAERVVALTLTDPPGETTHWTAATMAAQTGISVSSVQRIWRAHGLAPHRIRQFKLSNDPEFVTKLRDVVGLYVDPPAHAIVLSVDEKSQIQALDRTQPGLPLKKGRAGTMTHDYKRHGTTTLFAALNVLDGTVIGRNMQRHRHQEFIRFLNHIEAQVPAGKVIHAVLDNYAAHKHPKVRAWLHRHPRWTFHFVPTSCSWLNAVEGFFARLAKRRLKRGVFRSVADLQAAINRFLDEHNASDPKPFNWTADPDKIIAAVRRGHQVLDSIH 360          
BLAST of mRNA_P-wetherbeei_contig16454.2.1 vs. uniprot
Match: A0A554TVS4_9MYCO (IS630 family transposase n=1 Tax=Mycobacterium sp. KBS0706 TaxID=2578109 RepID=A0A554TVS4_9MYCO)

HSP 1 Score: 551 bits (1420), Expect = 1.870e-195
Identity = 265/353 (75.07%), Postives = 299/353 (84.70%), Query Frame = 1
Query:   34 FKLRPKDRASLEAAVANRNSPQKHVWRARIVLLTAAGHGTAEIMQRTGKSKTVIWRWQERFGAEGAEGLWRDKTRPSRIPPLDPTIAERVVALTLGGPPPAATHWTGAALAAEVGISVSSVQRIWRAHGLQPHRVRQFKLSNDPEFAAKLHDIVGLYVNPPDHAIVLSLDEKSQIQALDRTQPGLPMKKGRAGTMTHDYKRHGTTTLFAALDVLAGKVIGQCMKRHRHQEFIRFLNAIDAKVPAKKAIHVIVDNYATHKHPKVMAWLARHPRFTFHFTPKSASWLNAVEGLFAKLAKQSLKRGVFRSVDELKAAIHRFLAQTNATPKPFTWTKDPNKIIAAVKRGHQVLDSIH 1092
            F + P DRA LEA VA+RNSPQKHVWR RIVLLTA G GT  IM+  G +KT +WRWQERF A+G +GL RDKTRPSRIPPL  T+AE VVA TLG PP   THWT AA+A   GISVSSVQRIWRAHGLQPHR R+FKLS DP+FAAKL D+VGLYV+PP HAIVLS+DEKSQIQALDRTQPGLP+KKGR GT+THDYKRHGTTTLFAALDVL GKVIG+CM+RHRHQEFIRFLNAI+A+VP  K +HVI+DNYA HKHPKV AWL RHPRF FHFTP SASWLNAVEG FAKL+K+ L+RGVF S+ +L+ AI+RFLA+ N  PKPF WT DP+KI+AAVKRG+Q LDS+H
Sbjct:    7 FTVSPVDRARLEAVVADRNSPQKHVWRCRIVLLTADGQGTNAIMREAGVAKTAVWRWQERFAADGVDGLLRDKTRPSRIPPLAETVAEAVVARTLGDPPGETTHWTAAAMAEIAGISVSSVQRIWRAHGLQPHRFRRFKLSTDPQFAAKLRDVVGLYVDPPAHAIVLSVDEKSQIQALDRTQPGLPLKKGRLGTLTHDYKRHGTTTLFAALDVLEGKVIGRCMQRHRHQEFIRFLNAIEAEVPVGKIVHVILDNYAAHKHPKVRAWLGRHPRFVFHFTPTSASWLNAVEGFFAKLSKRRLQRGVFHSIVDLQTAINRFLAEANDNPKPFVWTADPDKILAAVKRGYQSLDSLH 359          
BLAST of mRNA_P-wetherbeei_contig16454.2.1 vs. uniprot
Match: UPI000466A66E (IS630 family transposase n=1 Tax=Bradyrhizobium sp. ARR65 TaxID=1040989 RepID=UPI000466A66E)

HSP 1 Score: 545 bits (1403), Expect = 7.240e-193
Identity = 264/349 (75.64%), Postives = 293/349 (83.95%), Query Frame = 1
Query:   46 PKDRASLEAAVANRNSPQKHVWRARIVLLTAAGHGTAEIMQRTGKSKTVIWRWQERFGAEGAEGLWRDKTRPSRIPPLDPTIAERVVALTLGGPPPAATHWTGAALAAEVGISVSSVQRIWRAHGLQPHRVRQFKLSNDPEFAAKLHDIVGLYVNPPDHAIVLSLDEKSQIQALDRTQPGLPMKKGRAGTMTHDYKRHGTTTLFAALDVLAGKVIGQCMKRHRHQEFIRFLNAIDAKVPAKKAIHVIVDNYATHKHPKVMAWLARHPRFTFHFTPKSASWLNAVEGLFAKLAKQSLKRGVFRSVDELKAAIHRFLAQTNATPKPFTWTKDPNKIIAAVKRGHQVLDSIH 1092
            P DR  LEA V +RN+PQKHVWRA IVLL+A G GT EI +RTGKSKT +WRWQERF  +G EGL  DKTR SRIPPL   +A RVVALT   PP  ATHWT   +A   GIS SSVQRIWRAHGLQPHR+RQFKLSNDP F  KLHD+VGLYVNPP+HAIVLS+DEKSQIQALDRTQPGLP++KGRA TMTHDYKR+GTTTLFAA DVL GKVIG+CM++HRHQEFIRFLN I+A+VPA KA+HVI+DNYATHKHPKV  WL RH RFTFHFTP S+SWLNAVEG FAKL+++ LKRGVFRSV ELK AI+RFL +TN  PKPFTW  DP KIIAAVKRGHQ+LDSIH
Sbjct:   11 PSDRLRLEALVRDRNAPQKHVWRAEIVLLSADGFGTNEIRRRTGKSKTCVWRWQERFMQQGFEGLLHDKTRRSRIPPLGAAVAARVVALTQNDPPAEATHWTANMMANVAGISASSVQRIWRAHGLQPHRIRQFKLSNDPNFVDKLHDVVGLYVNPPEHAIVLSVDEKSQIQALDRTQPGLPLRKGRAATMTHDYKRNGTTTLFAAFDVLEGKVIGRCMQKHRHQEFIRFLNQIEAQVPANKAVHVILDNYATHKHPKVRKWLDRHSRFTFHFTPTSSSWLNAVEGFFAKLSRRRLKRGVFRSVRELKVAINRFLDETNNNPKPFTWAADPEKIIAAVKRGHQLLDSIH 359          
BLAST of mRNA_P-wetherbeei_contig16454.2.1 vs. uniprot
Match: A0A4U6PC98_9SPHN (DDE endonuclease n=20 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A4U6PC98_9SPHN)

HSP 1 Score: 539 bits (1389), Expect = 1.170e-190
Identity = 265/364 (72.80%), Postives = 298/364 (81.87%), Query Frame = 1
Query:    1 MRVCGMHERTKFKLRPKDRASLEAAVANRNSPQKHVWRARIVLLTAAGHGTAEIMQRTGKSKTVIWRWQERFGAEGAEGLWRDKTRPSRIPPLDPTIAERVVALTLGGPPPAATHWTGAALAAEVGISVSSVQRIWRAHGLQPHRVRQFKLSNDPEFAAKLHDIVGLYVNPPDHAIVLSLDEKSQIQALDRTQPGLPMKKGRAGTMTHDYKRHGTTTLFAALDVLAGKVIGQCMKRHRHQEFIRFLNAIDAKVPAKKAIHVIVDNYATHKHPKVMAWLARHPRFTFHFTPKSASWLNAVEGLFAKLAKQSLKRGVFRSVDELKAAIHRFLAQTNATPKPFTWTKDPNKIIAAVKRGHQVLDSIH 1092
            MRV  M     F + P DRA L A + +RN+PQKHVWRA IVLL+A G GT EIM+RTGKSKT +WRWQERF AEG +GL RDKTRPSRIPPL P +A  VVA+TL  PP   THWT   +A   GIS S+V+RIW+AHGL PHR RQFKLSNDP+F  KL D+VGLYV+PP HAIVLS+DEKSQIQALDRTQPGLPMKKGR GTMTHDYKR+GTTTLFAAL+VL G VIG+ M+RHRHQEFIRFLNAI+A+VPA KA+HVI+DNYA HKHPKV  WL RH RFTFHFTP S SWLNAVEG FAKL+K+ LKRGVF SV +L+AAI+RFLA+ N  PKPFTW  DP+KIIAAVKRGHQ LDSIH
Sbjct:    1 MRVWRMRTGISFTVSPTDRARLTALIRDRNAPQKHVWRAEIVLLSADGVGTVEIMRRTGKSKTCVWRWQERFAAEGCDGLLRDKTRPSRIPPLGPDVAAHVVAMTLADPPGETTHWTADMMAKAAGISASAVRRIWKAHGLAPHRWRQFKLSNDPKFVDKLRDVVGLYVDPPAHAIVLSVDEKSQIQALDRTQPGLPMKKGRLGTMTHDYKRNGTTTLFAALNVLDGTVIGRNMQRHRHQEFIRFLNAINAEVPANKAVHVILDNYAPHKHPKVRRWLDRHSRFTFHFTPTSCSWLNAVEGFFAKLSKRRLKRGVFHSVIDLQAAINRFLAEHNQQPKPFTWAADPDKIIAAVKRGHQALDSIH 364          
BLAST of mRNA_P-wetherbeei_contig16454.2.1 vs. uniprot
Match: UPI00131DDF49 (IS630 family transposase n=1 Tax=Acidisoma sp. L85 TaxID=1641850 RepID=UPI00131DDF49)

HSP 1 Score: 538 bits (1387), Expect = 1.970e-190
Identity = 256/349 (73.35%), Postives = 296/349 (84.81%), Query Frame = 1
Query:   46 PKDRASLEAAVANRNSPQKHVWRARIVLLTAAGHGTAEIMQRTGKSKTVIWRWQERFGAEGAEGLWRDKTRPSRIPPLDPTIAERVVALTLGGPPPAATHWTGAALAAEVGISVSSVQRIWRAHGLQPHRVRQFKLSNDPEFAAKLHDIVGLYVNPPDHAIVLSLDEKSQIQALDRTQPGLPMKKGRAGTMTHDYKRHGTTTLFAALDVLAGKVIGQCMKRHRHQEFIRFLNAIDAKVPAKKAIHVIVDNYATHKHPKVMAWLARHPRFTFHFTPKSASWLNAVEGLFAKLAKQSLKRGVFRSVDELKAAIHRFLAQTNATPKPFTWTKDPNKIIAAVKRGHQVLDSIH 1092
            P D+  L+A V  RNSPQKHVWRA+IVLLTA GHGTAEIM+RTGK+KT +WRWQERF   G +GL RDKTRPSRIP L   +A+RVVALTL  PP   THWTG A+A    IS+S+ QRIWR HGLQPHR+RQFKLSNDP FAAKL D+VGLYV+PP HA+VLS+DEKSQIQALDRTQPGLP+KKGR GTM+HDY R+GTTTLFAAL+VL G+VIG+CM+ HRHQEFIRFLNA++A++PA K +H I+DNY THKHPKV+AWL RHPR+ FHFTP SASWLNAVEG FAKLAKQ LKRGVF S+  L+AAI+RF+A  NA P+PF WTK+P KII+AV+RGHQVLDSIH
Sbjct:   11 PADQVRLQAVVTVRNSPQKHVWRAQIVLLTAKGHGTAEIMRRTGKAKTAVWRWQERFMQAGMDGLLRDKTRPSRIPSLGSDVADRVVALTLSTPPGEVTHWTGRAMAKAAQISLSATQRIWRTHGLQPHRIRQFKLSNDPHFAAKLRDVVGLYVDPPAHAVVLSVDEKSQIQALDRTQPGLPLKKGRCGTMSHDYIRNGTTTLFAALNVLEGRVIGRCMQHHRHQEFIRFLNAVEAEIPAGKQVHAIMDNYGTHKHPKVIAWLERHPRWIFHFTPTSASWLNAVEGFFAKLAKQRLKRGVFHSLVSLQAAINRFVADNNADPRPFHWTKEPEKIISAVRRGHQVLDSIH 359          
BLAST of mRNA_P-wetherbeei_contig16454.2.1 vs. uniprot
Match: A0A537QIR0_9PROT (IS630 family transposase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537QIR0_9PROT)

HSP 1 Score: 536 bits (1382), Expect = 1.140e-189
Identity = 262/347 (75.50%), Postives = 291/347 (83.86%), Query Frame = 1
Query:   52 DRASLEAAVANRNSPQKHVWRARIVLLTAAGHGTAEIMQRTGKSKTVIWRWQERFGAEGAEGLWRDKTRPSRIPPLDPTIAERVVALTLGGPPPAATHWTGAALAAEVGISVSSVQRIWRAHGLQPHRVRQFKLSNDPEFAAKLHDIVGLYVNPPDHAIVLSLDEKSQIQALDRTQPGLPMKKGRAGTMTHDYKRHGTTTLFAALDVLAGKVIGQCMKRHRHQEFIRFLNAIDAKVPAKKAIHVIVDNYATHKHPKVMAWLARHPRFTFHFTPKSASWLNAVEGLFAKLAKQSLKRGVFRSVDELKAAIHRFLAQTNATPKPFTWTKDPNKIIAAVKRGHQVLDSIH 1092
            DRA LEA V +RNSPQKHVWRARIVLLT    GT EIM+RTGKSKT +WRWQERF   G +GL RDKTRPSRIPPL   +A RVVALT   P    THWT   +A   GISVSSVQRIWRAHGLQPHRVRQFKLS DP+FAAKL DIVGLYV+PP HA+VLS+DEKSQIQALDRTQPGLP+KKGRAGTMTHDYKR+GTTTLFAALDVL GKVIG+CM+RHRHQEFIRFLNAI+A+V   + +HVI+DNY  HKHPK  AWL RHPRF FH+TP SASWLNAVEG FAKL ++ LKRGVF S+ EL+AAI+RFL +TN  PKPFTWT DP+KI+AAVKRGHQ LDS+H
Sbjct:   13 DRARLEAIVTDRNSPQKHVWRARIVLLTGEDLGTVEIMRRTGKSKTCVWRWQERFMQAGVDGLLRDKTRPSRIPPLGAEVAARVVALTQTDPLGETTHWTAGMMAKTAGISVSSVQRIWRAHGLQPHRVRQFKLSTDPQFAAKLRDIVGLYVDPPAHALVLSVDEKSQIQALDRTQPGLPIKKGRAGTMTHDYKRNGTTTLFAALDVLDGKVIGRCMQRHRHQEFIRFLNAIEAEVAVGRIVHVILDNYGPHKHPKTCAWLDRHPRFVFHYTPTSASWLNAVEGFFAKLTRRRLKRGVFGSIVELQAAINRFLRETNDDPKPFTWTADPDKILAAVKRGHQTLDSLH 359          
BLAST of mRNA_P-wetherbeei_contig16454.2.1 vs. uniprot
Match: A0A1A7QFP4_9SPHN (DDE endonuclease n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1A7QFP4_9SPHN)

HSP 1 Score: 536 bits (1381), Expect = 1.610e-189
Identity = 260/353 (73.65%), Postives = 295/353 (83.57%), Query Frame = 1
Query:   34 FKLRPKDRASLEAAVANRNSPQKHVWRARIVLLTAAGHGTAEIMQRTGKSKTVIWRWQERFGAEGAEGLWRDKTRPSRIPPLDPTIAERVVALTLGGPPPAATHWTGAALAAEVGISVSSVQRIWRAHGLQPHRVRQFKLSNDPEFAAKLHDIVGLYVNPPDHAIVLSLDEKSQIQALDRTQPGLPMKKGRAGTMTHDYKRHGTTTLFAALDVLAGKVIGQCMKRHRHQEFIRFLNAIDAKVPAKKAIHVIVDNYATHKHPKVMAWLARHPRFTFHFTPKSASWLNAVEGLFAKLAKQSLKRGVFRSVDELKAAIHRFLAQTNATPKPFTWTKDPNKIIAAVKRGHQVLDSIH 1092
             ++ P D   L+  V +RN+PQKHVWRA IVLL+AAG GT EIM+RTGKSKT +WRWQERF AEG +GL RDKTRPSRIPPL P +AERVVALTL  PP  ATHWT A +A ++GISVSSVQRIWRAHGL+PHRVRQFKLSNDP F  KL D+VGLYV+PP HAIVLS DEKSQIQALDRTQPGLP+KKGR GTMTHDYKR+GTTTLFAAL+VL G VIG+ M+RHRHQ FIRFLN I+ +VP  K++HVI+DNYA HKHPKV  WL RH RFTFHFTP S SWLNAVEG FAKL ++ LKRG F S+ +L+AAI+RF+ + NA PKPFTWT DP+KIIAAVKRGHQVLDS H
Sbjct:    7 IEVSPSDHRRLKVLVRDRNTPQKHVWRAEIVLLSAAGGGTVEIMRRTGKSKTCVWRWQERFAAEGVDGLLRDKTRPSRIPPLAPEVAERVVALTLTDPPVEATHWTAAMMARQIGISVSSVQRIWRAHGLRPHRVRQFKLSNDPLFVEKLRDVVGLYVDPPAHAIVLSFDEKSQIQALDRTQPGLPLKKGRLGTMTHDYKRNGTTTLFAALNVLDGTVIGRNMQRHRHQVFIRFLNTIERQVPPGKSVHVILDNYAAHKHPKVRQWLDRHERFTFHFTPTSCSWLNAVEGFFAKLTRRRLKRGTFHSLVDLQAAINRFVVEQNADPKPFTWTADPDKIIAAVKRGHQVLDSNH 359          
BLAST of mRNA_P-wetherbeei_contig16454.2.1 vs. uniprot
Match: A0A4R3LQT1_9HYPH (Homeodomain-containing protein (Fragment) n=2 Tax=Tepidamorphus gemmatus TaxID=747076 RepID=A0A4R3LQT1_9HYPH)

HSP 1 Score: 535 bits (1377), Expect = 7.860e-189
Identity = 263/364 (72.25%), Postives = 296/364 (81.32%), Query Frame = 1
Query:    1 MRVCGMHERTKFKLRPKDRASLEAAVANRNSPQKHVWRARIVLLTAAGHGTAEIMQRTGKSKTVIWRWQERFGAEGAEGLWRDKTRPSRIPPLDPTIAERVVALTLGGPPPAATHWTGAALAAEVGISVSSVQRIWRAHGLQPHRVRQFKLSNDPEFAAKLHDIVGLYVNPPDHAIVLSLDEKSQIQALDRTQPGLPMKKGRAGTMTHDYKRHGTTTLFAALDVLAGKVIGQCMKRHRHQEFIRFLNAIDAKVPAKKAIHVIVDNYATHKHPKVMAWLARHPRFTFHFTPKSASWLNAVEGLFAKLAKQSLKRGVFRSVDELKAAIHRFLAQTNATPKPFTWTKDPNKIIAAVKRGHQVLDSIH 1092
            MRV  M       L   DR+ LEA V NRN+PQKH WRARIVLL+A G GT EIM+RTGKSKT +WRWQERF  EG +GL RDKTRPSRI PL+  + ++V+ALT   PP  ATHWT  A+A  VGIS SSVQRIWRAHGL PHR R FKLSNDP+F  KL DIVGLYV+PP HA+VLS DEKSQIQALDRTQPGLPMKKGRAGTMTHDYKR+GTTTLFAAL+VL G VIG+ M+RHRHQEFIRFLNA++A+VPA K IH I+DNYATHKHP+V AWLARHPR+TFHFTP S SWLNAVE  FA L K+ LKRGVFRSV +L+AAI+R+L + N  PKPF WT DP+KIIAAVKRG +VLDSIH
Sbjct:    1 MRVWAMRPGISITLTAADRSRLEAIVGNRNAPQKHAWRARIVLLSADGLGTFEIMRRTGKSKTCVWRWQERFAEEGVKGLLRDKTRPSRIKPLEQAVIDKVIALTATAPPHEATHWTAPAMAKTVGISASSVQRIWRAHGLAPHRTRHFKLSNDPDFVPKLRDIVGLYVDPPAHAVVLSADEKSQIQALDRTQPGLPMKKGRAGTMTHDYKRNGTTTLFAALNVLDGTVIGRNMQRHRHQEFIRFLNAVEAEVPAGKLIHAILDNYATHKHPRVRAWLARHPRWTFHFTPTSCSWLNAVETFFATLTKRRLKRGVFRSVVDLQAAINRYLGEANRDPKPFIWTADPDKIIAAVKRGREVLDSIH 364          
BLAST of mRNA_P-wetherbeei_contig16454.2.1 vs. uniprot
Match: A0A1B2ECP2_9HYPH (DDE endonuclease n=12 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1B2ECP2_9HYPH)

HSP 1 Score: 534 bits (1376), Expect = 9.310e-189
Identity = 262/351 (74.64%), Postives = 296/351 (84.33%), Query Frame = 1
Query:   40 LRPKDRASLEAAVANRNSPQKHVWRARIVLLTAAGHGTAEIMQRTGKSKTVIWRWQERFGAEGAEGLWRDKTRPSRIPPLDPTIAERVVALTLGGPPPAATHWTGAALAAEVGISVSSVQRIWRAHGLQPHRVRQFKLSNDPEFAAKLHDIVGLYVNPPDHAIVLSLDEKSQIQALDRTQPGLPMKKGRAGTMTHDYKRHGTTTLFAALDVLAGKVIGQCMKRHRHQEFIRFLNAIDAKVPAKKAIHVIVDNYATHKHPKVMAWLARHPRFTFHFTPKSASWLNAVEGLFAKLAKQSLKRGVFRSVDELKAAIHRFLAQTNATPKPFTWTKDPNKIIAAVKRGHQVLDSIH 1092
            L   DR  LEA  +NRN+ QKHVWRA IV+L+A G GTAEIM+RTG SKT +WRWQERF  EG +GL RDKTRPSRI PL P IAERVV LTL  P   ATHWT A +A E GIS S+V+RIWRAHGLQPHR RQFKLSNDP+FA KL D+VGLYV+PP HAIVLS+DEKSQIQALDRTQPGLP+KKGR GTMTHDYKR+GTTTLFAAL+VL G VIG+ M+RHRHQEFIRFLNAI+A+VP  KA+HVI+DNYA HKHPKV AWL RH RFTFHFTP S SWLNAVEG FAKL +Q LKRGVF SV +L+ AI+R++A+TNA+PKPFTWT DP++IIAAV+RGHQ LDSIH
Sbjct:    9 LTSSDRHRLEALTSNRNTAQKHVWRAAIVVLSADGVGTAEIMRRTGTSKTCVWRWQERFMQEGVDGLLRDKTRPSRIKPLGPDIAERVVTLTLADPLAEATHWTAAMMAKETGISASAVRRIWRAHGLQPHRYRQFKLSNDPKFAEKLRDVVGLYVDPPAHAIVLSVDEKSQIQALDRTQPGLPLKKGRLGTMTHDYKRNGTTTLFAALNVLDGSVIGRNMQRHRHQEFIRFLNAIEAQVPPGKAVHVILDNYAAHKHPKVRAWLDRHERFTFHFTPTSCSWLNAVEGFFAKLTRQRLKRGVFYSVVDLQTAINRYVAETNASPKPFTWTADPDEIIAAVRRGHQALDSIH 359          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16454.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1J5QFX8_9ZZZZ1.490e-21580.50Integrase core domain protein n=3 Tax=root TaxID=1... [more]
A8TJ44_9PROT2.370e-19676.55Amidase n=7 Tax=alpha proteobacterium BAL199 TaxID... [more]
A0A554TVS4_9MYCO1.870e-19575.07IS630 family transposase n=1 Tax=Mycobacterium sp.... [more]
UPI000466A66E7.240e-19375.64IS630 family transposase n=1 Tax=Bradyrhizobium sp... [more]
A0A4U6PC98_9SPHN1.170e-19072.80DDE endonuclease n=20 Tax=Alphaproteobacteria TaxI... [more]
UPI00131DDF491.970e-19073.35IS630 family transposase n=1 Tax=Acidisoma sp. L85... [more]
A0A537QIR0_9PROT1.140e-18975.50IS630 family transposase n=1 Tax=Alphaproteobacter... [more]
A0A1A7QFP4_9SPHN1.610e-18973.65DDE endonuclease n=5 Tax=Alphaproteobacteria TaxID... [more]
A0A4R3LQT1_9HYPH7.860e-18972.25Homeodomain-containing protein (Fragment) n=2 Tax=... [more]
A0A1B2ECP2_9HYPH9.310e-18974.64DDE endonuclease n=12 Tax=Hyphomicrobiales TaxID=3... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16454contigP-wetherbeei_contig16454:280..1374 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog331869.BAL199_03539
PFAMsDDE_3,HTH_23,HTH_29,HTH_32
Model size1095
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.57e-198
EggNOG OGsCOG3335@1|root,COG3335@2|Bacteria,1MW7X@1224|Proteobacteria,2TTH8@28211|Alphaproteobacteria,4BR7G@82117|unclassified Alphaproteobacteria
DescriptionCOG3335 Transposase and inactivated derivatives
Cds size1095
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186087.5330336-CDS-P-wetherbeei_contig16454:279..13741683186087.5330336-CDS-P-wetherbeei_contig16454:279..1374Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16454 280..1374 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16454.2.1prot_P-wetherbeei_contig16454.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16454 280..1374 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16454.2.1

>prot_P-wetherbeei_contig16454.2.1 ID=prot_P-wetherbeei_contig16454.2.1|Name=mRNA_P-wetherbeei_contig16454.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=365bp
MRVCGMHERTKFKLRPKDRASLEAAVANRNSPQKHVWRARIVLLTAAGHG
TAEIMQRTGKSKTVIWRWQERFGAEGAEGLWRDKTRPSRIPPLDPTIAER
VVALTLGGPPPAATHWTGAALAAEVGISVSSVQRIWRAHGLQPHRVRQFK
LSNDPEFAAKLHDIVGLYVNPPDHAIVLSLDEKSQIQALDRTQPGLPMKK
GRAGTMTHDYKRHGTTTLFAALDVLAGKVIGQCMKRHRHQEFIRFLNAID
AKVPAKKAIHVIVDNYATHKHPKVMAWLARHPRFTFHFTPKSASWLNAVE
GLFAKLAKQSLKRGVFRSVDELKAAIHRFLAQTNATPKPFTWTKDPNKII
AAVKRGHQVLDSIH*
back to top

mRNA from alignment at P-wetherbeei_contig16454:280..1374+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16454.2.1 ID=mRNA_P-wetherbeei_contig16454.2.1|Name=mRNA_P-wetherbeei_contig16454.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1095bp|location=Sequence derived from alignment at P-wetherbeei_contig16454:280..1374+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGAGTCTGTGGAATGCACGAAAGAACCAAGTTCAAGCTCAGACCCAA GGACCGTGCCAGTCTTGAAGCGGCCGTGGCGAACCGGAACAGCCCCCAGA AGCACGTCTGGCGGGCCAGGATTGTCCTTCTGACCGCGGCTGGTCACGGC ACGGCCGAGATCATGCAGCGGACGGGCAAGTCCAAGACCGTCATTTGGCG CTGGCAAGAGCGGTTCGGTGCCGAAGGTGCCGAGGGGCTGTGGCGCGACA AGACGCGGCCCTCCCGTATCCCGCCCCTGGACCCGACGATCGCCGAGCGC GTGGTCGCGCTGACCTTGGGCGGCCCGCCGCCGGCGGCGACCCATTGGAC GGGAGCGGCCTTGGCGGCGGAGGTCGGTATCAGCGTCAGCTCGGTCCAAC GCATCTGGCGCGCTCATGGTCTGCAGCCGCATCGCGTGCGCCAGTTCAAA CTCTCCAACGACCCTGAGTTCGCAGCCAAGCTGCACGATATTGTCGGGCT CTACGTCAACCCGCCGGACCACGCCATTGTCTTGTCGCTCGACGAGAAGA GCCAGATCCAGGCGCTCGACCGGACCCAACCGGGCCTTCCGATGAAGAAG GGCCGTGCTGGGACGATGACCCACGACTACAAGCGTCATGGCACAACCAC CCTGTTTGCGGCACTCGATGTCCTGGCGGGCAAGGTCATCGGCCAGTGCA TGAAACGACATCGCCATCAGGAGTTCATCCGATTCCTGAACGCTATTGAC GCCAAGGTTCCCGCCAAAAAGGCAATCCATGTCATCGTCGACAACTATGC CACCCACAAGCATCCCAAGGTCATGGCGTGGCTCGCCCGACATCCACGCT TCACCTTCCACTTCACGCCGAAGTCGGCCTCCTGGCTCAACGCCGTCGAG GGACTGTTCGCAAAGCTCGCCAAACAAAGCCTCAAACGGGGCGTGTTCCG ATCGGTCGATGAACTTAAGGCCGCTATCCACCGCTTCCTCGCACAGACCA ATGCCACGCCAAAGCCCTTTACCTGGACCAAAGATCCCAACAAGATCATC GCCGCCGTCAAACGAGGGCACCAAGTGTTAGATTCGATCCACTAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig16454:280..1374+

>mRNA_P-wetherbeei_contig16454.2.1 ID=mRNA_P-wetherbeei_contig16454.2.1|Name=mRNA_P-wetherbeei_contig16454.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1095bp|location=Sequence derived from alignment at P-wetherbeei_contig16454:280..1374+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGAGTCTGTGGAATGCACGAAAGAACCAAGTTCAAGCTCAGACCCAA
GGACCGTGCCAGTCTTGAAGCGGCCGTGGCGAACCGGAACAGCCCCCAGA
AGCACGTCTGGCGGGCCAGGATTGTCCTTCTGACCGCGGCTGGTCACGGC
ACGGCCGAGATCATGCAGCGGACGGGCAAGTCCAAGACCGTCATTTGGCG
CTGGCAAGAGCGGTTCGGTGCCGAAGGTGCCGAGGGGCTGTGGCGCGACA
AGACGCGGCCCTCCCGTATCCCGCCCCTGGACCCGACGATCGCCGAGCGC
GTGGTCGCGCTGACCTTGGGCGGCCCGCCGCCGGCGGCGACCCATTGGAC
GGGAGCGGCCTTGGCGGCGGAGGTCGGTATCAGCGTCAGCTCGGTCCAAC
GCATCTGGCGCGCTCATGGTCTGCAGCCGCATCGCGTGCGCCAGTTCAAA
CTCTCCAACGACCCTGAGTTCGCAGCCAAGCTGCACGATATTGTCGGGCT
CTACGTCAACCCGCCGGACCACGCCATTGTCTTGTCGCTCGACGAGAAGA
GCCAGATCCAGGCGCTCGACCGGACCCAACCGGGCCTTCCGATGAAGAAG
GGCCGTGCTGGGACGATGACCCACGACTACAAGCGTCATGGCACAACCAC
CCTGTTTGCGGCACTCGATGTCCTGGCGGGCAAGGTCATCGGCCAGTGCA
TGAAACGACATCGCCATCAGGAGTTCATCCGATTCCTGAACGCTATTGAC
GCCAAGGTTCCCGCCAAAAAGGCAATCCATGTCATCGTCGACAACTATGC
CACCCACAAGCATCCCAAGGTCATGGCGTGGCTCGCCCGACATCCACGCT
TCACCTTCCACTTCACGCCGAAGTCGGCCTCCTGGCTCAACGCCGTCGAG
GGACTGTTCGCAAAGCTCGCCAAACAAAGCCTCAAACGGGGCGTGTTCCG
ATCGGTCGATGAACTTAAGGCCGCTATCCACCGCTTCCTCGCACAGACCA
ATGCCACGCCAAAGCCCTTTACCTGGACCAAAGATCCCAACAAGATCATC
GCCGCCGTCAAACGAGGGCACCAAGTGTTAGATTCGATCCACTAG
back to top