mRNA_P-wetherbeei_contig16431.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16431.2.1
Unique NamemRNA_P-wetherbeei_contig16431.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16431.2.1 vs. uniprot
Match: M4BYZ0_HYAAE (Isochorismatase domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYZ0_HYAAE)

HSP 1 Score: 139 bits (350), Expect = 6.330e-38
Identity = 70/142 (49.30%), Postives = 92/142 (64.79%), Query Frame = 1
Query:    1 TPGHNVQAHINEALQAWAGANMKTVRYIQKGENNRCEMYSCFKAEVPLPEDPSTGLNKLLVEELRNGDPVVGGGGRVLIAGQALSHCVNHSARDLAAAWPAGRMADLCLLADCTSPVPGFDAAAEAFVADMRAVGVTVTDSA 426
            +PGHNV ++++ A   W    +K V+Y+ KG N+  E YS  KAE+ LP D +T LN+ LVE L   D       +V++ G+ALSHCVN++ RDL  AWP  R  DL +L DCTSPVPGF+ A E F+ DM A GVT+T SA
Sbjct:  141 SPGHNVVSNVHAAAMEWTKVALKPVQYVIKGSNSFTEHYSALKAEIELPYDFTTSLNQSLVESLGRAD-------KVIVCGEALSHCVNYTVRDLVTAWPQDRRQDLVILTDCTSPVPGFETAGEEFLRDMAAKGVTLTTSA 275          
BLAST of mRNA_P-wetherbeei_contig16431.2.1 vs. uniprot
Match: A0A225V1U5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V1U5_9STRA)

HSP 1 Score: 135 bits (340), Expect = 3.510e-37
Identity = 67/141 (47.52%), Postives = 91/141 (64.54%), Query Frame = 1
Query:    1 TPGHNVQAHINEALQAWAGANMKTVRYIQKGENNRCEMYSCFKAEVPLPEDPSTGLNKLLVEELRNGDPVVGGGGRVLIAGQALSHCVNHSARDLAAAWPAGRMADLCLLADCTSPVPGFDAAAEAFVADMRAVGVTVTDS 423
            +PGHN+  ++  A   W   ++K V+Y+ KG N+  E YS  KAE  LP DP+T LN+ LV+ L+  D VV       + G+A+SHCVN++ RDL AAWP  R  DL +L DC+SPVPGF+ A E F+ DM A G+T+T S
Sbjct:   74 SPGHNIVPNVLAAAVEWTKVSLKPVQYVMKGSNSFTEHYSALKAEFELPYDPTTSLNQALVDTLKLADKVV-------VCGEAISHCVNYTVRDLVAAWPKERRHDLVILTDCSSPVPGFEKAGEEFLRDMAAEGLTLTTS 207          
BLAST of mRNA_P-wetherbeei_contig16431.2.1 vs. uniprot
Match: A0A3M6VUV5_9STRA (Isochorismatase domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VUV5_9STRA)

HSP 1 Score: 137 bits (345), Expect = 4.100e-37
Identity = 66/141 (46.81%), Postives = 93/141 (65.96%), Query Frame = 1
Query:    1 TPGHNVQAHINEALQAWAGANMKTVRYIQKGENNRCEMYSCFKAEVPLPEDPSTGLNKLLVEELRNGDPVVGGGGRVLIAGQALSHCVNHSARDLAAAWPAGRMADLCLLADCTSPVPGFDAAAEAFVADMRAVGVTVTDS 423
            +PGHN+  +++ A   W   ++K V+Y+ KG N+  E YS  KAE  LP DP+T LN+ LVE L+  D VV       + G+A+SHCVN++ RDL AAWP  R +DL +L DC+SPVPG++ A E F+ +M A G+T+T S
Sbjct:  147 SPGHNIVPNVHAAAMEWTKLSLKPVQYVMKGANSFTEHYSALKAEFELPYDPTTSLNQSLVESLKLADKVV-------VCGEAISHCVNYTVRDLVAAWPKDRRSDLVILTDCSSPVPGYEKAGEKFLRNMAAAGLTLTTS 280          
BLAST of mRNA_P-wetherbeei_contig16431.2.1 vs. uniprot
Match: W2Q9Q4_PHYPN (Isochorismatase domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2Q9Q4_PHYPN)

HSP 1 Score: 136 bits (343), Expect = 7.240e-37
Identity = 69/141 (48.94%), Postives = 92/141 (65.25%), Query Frame = 1
Query:    1 TPGHNVQAHINEALQAWAGANMKTVRYIQKGENNRCEMYSCFKAEVPLPEDPSTGLNKLLVEELRNGDPVVGGGGRVLIAGQALSHCVNHSARDLAAAWPAGRMADLCLLADCTSPVPGFDAAAEAFVADMRAVGVTVTDS 423
            +PGHN+  ++  A   W  A++K V+YI KG N+  E YS  KAE  L  DP+T LN+ LV+ L+  D VV       + G+A+SHCVN++ RDLA AWPA R+ DL +L DC SPVPGF+ A E F+ DM A G+T+T S
Sbjct:  142 SPGHNIVPNVLAAAMEWTKASLKPVQYIMKGSNSFTEHYSALKAEFELSYDPTTSLNQALVDTLKLADKVV-------VCGEAISHCVNYTVRDLADAWPAERIHDLVILTDCASPVPGFEEAGEEFLRDMAAKGLTLTTS 275          
BLAST of mRNA_P-wetherbeei_contig16431.2.1 vs. uniprot
Match: A0A8K1C652_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C652_PYTOL)

HSP 1 Score: 141 bits (355), Expect = 1.350e-36
Identity = 68/141 (48.23%), Postives = 93/141 (65.96%), Query Frame = 1
Query:    1 TPGHNVQAHINEALQAWAGANMKTVRYIQKGENNRCEMYSCFKAEVPLPEDPSTGLNKLLVEELRNGDPVVGGGGRVLIAGQALSHCVNHSARDLAAAWPAGRMADLCLLADCTSPVPGFDAAAEAFVADMRAVGVTVTDS 423
            TPGHN+  +++EA  AW   +MK ++Y+ KG N+  E YS  KAE  LP DP+T LN+ L+  L++ D VV       + G+A+SHCVN++ RDL   WP  RM+DL +L DC SPVPGF+AA E F+ DM A G+ +T S
Sbjct:  414 TPGHNIVDNVHEAALAWTKQSMKPIQYVMKGSNSFTEHYSALKAEYELPYDPATSLNQSLINVLKHADKVV-------VCGEAISHCVNYTVRDLVDHWPVERMSDLIILTDCASPVPGFEAAGEEFLKDMAAKGLVLTTS 547          
BLAST of mRNA_P-wetherbeei_contig16431.2.1 vs. uniprot
Match: A0A6A3TN12_9STRA (Isochorismatase domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TN12_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.410e-36
Identity = 68/146 (46.58%), Postives = 93/146 (63.70%), Query Frame = 1
Query:    1 TPGHNVQAHINEALQAWAGANMKTVRYIQKGENNRCEMYSCFKAEVPLPEDPSTGLNKLLVEELRNGDPVVGGGGRVLIAGQALSHCVNHSARDLAAAWPAGRMADLCLLADCTSPVPGFDAAAEAFVADMRAVGVTVTDSASVLA 438
            +PGHN+  +++ A   W   ++K V+Y+ KG N+  E YS  KAE  LP DP+T LN+ LV+ L+  D VV       + G+A+SHCVN++ RDL AAWP  R  DL +L DC SPVPGF+ A E F+ DM A G+T+T S +  A
Sbjct:  141 SPGHNIVPNVHAAALEWTKCSLKPVQYVMKGCNSFTEHYSALKAEFELPYDPATSLNQALVDSLKLADKVV-------VCGEAVSHCVNYTVRDLVAAWPQHRCKDLVILTDCASPVPGFEKAGEEFLRDMAAEGLTLTTSVNFAA 279          
BLAST of mRNA_P-wetherbeei_contig16431.2.1 vs. uniprot
Match: A0A225UP94_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A225UP94_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.980e-36
Identity = 67/141 (47.52%), Postives = 91/141 (64.54%), Query Frame = 1
Query:    1 TPGHNVQAHINEALQAWAGANMKTVRYIQKGENNRCEMYSCFKAEVPLPEDPSTGLNKLLVEELRNGDPVVGGGGRVLIAGQALSHCVNHSARDLAAAWPAGRMADLCLLADCTSPVPGFDAAAEAFVADMRAVGVTVTDS 423
            +PGHN+  ++  A   W   ++K V+Y+ KG N+  E YS  KAE  LP DP+T LN+ LV+ L+  D VV       + G+A+SHCVN++ RDL AAWP  R  DL +L DC+SPVPGF+ A E F+ DM A G+T+T S
Sbjct:  141 SPGHNIVPNVLAAAVEWTKVSLKPVQYVMKGSNSFTEHYSALKAEFELPYDPTTSLNQALVDTLKLADKVV-------VCGEAISHCVNYTVRDLVAAWPKERRHDLVILTDCSSPVPGFEKAGEEFLRDMAAEGLTLTTS 274          
BLAST of mRNA_P-wetherbeei_contig16431.2.1 vs. uniprot
Match: A0A3R7K0V6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K0V6_9STRA)

HSP 1 Score: 138 bits (347), Expect = 8.780e-36
Identity = 69/141 (48.94%), Postives = 91/141 (64.54%), Query Frame = 1
Query:    1 TPGHNVQAHINEALQAWAGANMKTVRYIQKGENNRCEMYSCFKAEVPLPEDPSTGLNKLLVEELRNGDPVVGGGGRVLIAGQALSHCVNHSARDLAAAWPAGRMADLCLLADCTSPVPGFDAAAEAFVADMRAVGVTVTDS 423
            TPGHN+   +  A   W   ++K V+Y+ KG N+  E YS  KAE  LP DP+T LN+ LV+ L+  D VV       I G+A+SHCVN++ RDL AAWP  R++DL +L DC SPVPGF+ A E F+ DM A G+T+T S
Sbjct:  351 TPGHNIVPDVLAAALEWTKKSLKLVQYVMKGSNSFTEHYSALKAEFELPYDPATSLNQELVDSLKLADKVV-------ICGEAISHCVNYTVRDLVAAWPKERLSDLVILTDCASPVPGFEQAGEQFLVDMAAEGLTLTTS 484          
BLAST of mRNA_P-wetherbeei_contig16431.2.1 vs. uniprot
Match: A0A329SZG8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SZG8_9STRA)

HSP 1 Score: 133 bits (334), Expect = 4.400e-35
Identity = 66/141 (46.81%), Postives = 90/141 (63.83%), Query Frame = 1
Query:    1 TPGHNVQAHINEALQAWAGANMKTVRYIQKGENNRCEMYSCFKAEVPLPEDPSTGLNKLLVEELRNGDPVVGGGGRVLIAGQALSHCVNHSARDLAAAWPAGRMADLCLLADCTSPVPGFDAAAEAFVADMRAVGVTVTDS 423
            +PGHN+  ++  +   W   ++K ++Y+ KG N   E YS  KAE  LP DPST LNK L++ L+  + VV       I G+ALSHCVN++ RDL AAWP  R+ DL +L DC+SPVPGF+  A+ F+ DM A GVT+  S
Sbjct:  180 SPGHNIVPNVLASALKWTKKSLKPIQYVMKGSNPFTEHYSALKAEYELPYDPSTNLNKKLIKSLQRANKVV-------IVGEALSHCVNYTVRDLVAAWPKKRLCDLVILTDCSSPVPGFEEPAKQFLRDMAAKGVTLMTS 313          
BLAST of mRNA_P-wetherbeei_contig16431.2.1 vs. uniprot
Match: A0A6S9E012_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E012_HETAK)

HSP 1 Score: 132 bits (331), Expect = 4.490e-35
Identity = 74/140 (52.86%), Postives = 91/140 (65.00%), Query Frame = 1
Query:    1 TPGHNVQAHINEALQAWAGANMKTVRYIQKGENNRCEMYSCFKAEVPLPEDPSTGLNKLLVEELRNGDPVVGGGGRVLIAGQALSHCVNHSARDLAAAWPAGRMADLC----LLADCTSPVPGFDAAAEAFVADMRAVGV 408
            TPGH V   +NEALQ W+ A  KT++Y+ KG N + EMYS FKAEV +P+DPSTGLN  ++EEL   D       RVL+ G++ SHCVNH  RDLAAA  A   A+ C    LL D TS V GF++A    V DMRA+GV
Sbjct:  126 TPGHAVVPVLNEALQEWSVAKHKTIKYLAKGMNVKTEMYSPFKAEVQIPDDPSTGLNTAVLEELAAAD-------RVLVCGESFSHCVNHGLRDLAAALSAAGGAEACARAVLLTDGTSCVAGFESAGAQLVEDMRALGV 258          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16431.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M4BYZ0_HYAAE6.330e-3849.30Isochorismatase domain-containing protein n=1 Tax=... [more]
A0A225V1U5_9STRA3.510e-3747.52Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A3M6VUV5_9STRA4.100e-3746.81Isochorismatase domain-containing protein n=1 Tax=... [more]
W2Q9Q4_PHYPN7.240e-3748.94Isochorismatase domain-containing protein n=12 Tax... [more]
A0A8K1C652_PYTOL1.350e-3648.23Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A3TN12_9STRA1.410e-3646.58Isochorismatase domain-containing protein n=3 Tax=... [more]
A0A225UP94_9STRA1.980e-3647.52Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A3R7K0V6_9STRA8.780e-3648.94Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A329SZG8_9STRA4.400e-3546.81Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A6S9E012_HETAK4.490e-3552.86Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16431contigP-wetherbeei_contig16431:760..1516 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog272952.HpaP811788
PFAMsIsochorismatase
Model size447
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.04e-38
EggNOG OGsCOG1335@1|root,2QW5A@2759|Eukaryota,3QBFR@4776|Peronosporales
Descriptionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
Cds size447
COG categoryQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186086.9281282-CDS-P-wetherbeei_contig16431:759..11021683186086.9281282-CDS-P-wetherbeei_contig16431:759..1102Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16431 760..1102 -
1683186086.9404292-CDS-P-wetherbeei_contig16431:1412..15161683186086.9404292-CDS-P-wetherbeei_contig16431:1412..1516Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16431 1413..1516 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16431.2.1prot_P-wetherbeei_contig16431.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16431 760..1516 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16431.2.1

>prot_P-wetherbeei_contig16431.2.1 ID=prot_P-wetherbeei_contig16431.2.1|Name=mRNA_P-wetherbeei_contig16431.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=149bp
TPGHNVQAHINEALQAWAGANMKTVRYIQKGENNRCEMYSCFKAEVPLPE
DPSTGLNKLLVEELRNGDPVVGGGGRVLIAGQALSHCVNHSARDLAAAWP
AGRMADLCLLADCTSPVPGFDAAAEAFVADMRAVGVTVTDSASVLAAS*
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mRNA from alignment at P-wetherbeei_contig16431:760..1516-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16431.2.1 ID=mRNA_P-wetherbeei_contig16431.2.1|Name=mRNA_P-wetherbeei_contig16431.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=757bp|location=Sequence derived from alignment at P-wetherbeei_contig16431:760..1516- (Phaeothamnion wetherbeei SAG_119_79)
ACACCGGGGCACAATGTGCAGGCGCACATCAACGAGGCGCTGCAGGCGTG GGCAGGTGCCAACATGAAGACGGTGCGCTACATCCAAAAGGGCGAGAACA ACAGGTGCGGCGGGGGGTACTGTAGGCTTGGGAAAGGCGTGCGGAGGTGG CGCAAGCGAGGGGAAGCGGTGTGCGTTCTTCGTCATGCCGACTCGCTCAT CAACTTTTTCTGGCTACTTTGCCTCTGGAAAAAGAGTGAGTTGGACGAAT GGATAAGGGGTGCCTGCCAGTCTGGGAAGCCGACGGGTGCCGCCACTTGC GCATGACGCCGCCCTTGAAAGGTGGTTTGCACGGTGCATCTAACATAACC TCTTAGTGTAGCAAAACCTGAACTCGCTCCGGCTGGCGCATCGCCCGCAT GCTGCCGCTGCCAGGTGCGAAATGTACAGCTGCTTCAAGGCGGAGGTGCC CCTGCCGGAAGACCCTTCCACGGGCCTCAACAAACTTCTCGTCGAAGAGC TCCGCAACGGCGACCCCGTCGTCGGCGGCGGCGGGCGAGTGCTCATCGCC GGGCAGGCACTCTCGCACTGCGTCAATCACTCGGCACGCGACCTCGCCGC CGCGTGGCCCGCCGGGCGCATGGCGGACCTGTGCCTGCTGGCGGACTGCA CATCCCCGGTGCCGGGCTTCGACGCGGCCGCCGAGGCGTTCGTCGCGGAC ATGCGCGCGGTGGGCGTCACGGTGACAGACAGCGCTTCGGTGCTTGCGGC GTCGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16431:760..1516-

>mRNA_P-wetherbeei_contig16431.2.1 ID=mRNA_P-wetherbeei_contig16431.2.1|Name=mRNA_P-wetherbeei_contig16431.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig16431:760..1516- (Phaeothamnion wetherbeei SAG_119_79)
ACACCGGGGCACAATGTGCAGGCGCACATCAACGAGGCGCTGCAGGCGTG
GGCAGGTGCCAACATGAAGACGGTGCGCTACATCCAAAAGGGCGAGAACA
ACAGGTGCGAAATGTACAGCTGCTTCAAGGCGGAGGTGCCCCTGCCGGAA
GACCCTTCCACGGGCCTCAACAAACTTCTCGTCGAAGAGCTCCGCAACGG
CGACCCCGTCGTCGGCGGCGGCGGGCGAGTGCTCATCGCCGGGCAGGCAC
TCTCGCACTGCGTCAATCACTCGGCACGCGACCTCGCCGCCGCGTGGCCC
GCCGGGCGCATGGCGGACCTGTGCCTGCTGGCGGACTGCACATCCCCGGT
GCCGGGCTTCGACGCGGCCGCCGAGGCGTTCGTCGCGGACATGCGCGCGG
TGGGCGTCACGGTGACAGACAGCGCTTCGGTGCTTGCGGCGTCGTGA
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