mRNA_P-wetherbeei_contig16413.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig16413.1.1
Unique NamemRNA_P-wetherbeei_contig16413.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig16413.1.1 vs. uniprot
Match: A0A7X9AFS2_9BURK (Translation initiation factor IF-2 n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AFS2_9BURK)

HSP 1 Score: 323 bits (827), Expect = 7.080e-101
Identity = 164/234 (70.09%), Postives = 193/234 (82.48%), Query Frame = 1
Query:   70 RKRHDRNAPEVVQVSNAIEIPELISLSDLATRLRVPASDVIKTLIKEGQMVTINQALNYEQASKLAISYGFEVSEAVDEMPDLDLLEDEDQGELLPRPPVVTVLGHVDHGKTSLLDAIRKANVTAGEAGGITQRIGAYTVSYKDHPVTFIDTPGHEAFTAMRARGAQVTDIAILVVAADDGVMPQTIEAINHARAAKVPIIVAVNKVDKPNANPDKVLQQLTEYNLVPEDWGGD 771
            R R D+       V+  +EIPE I+LS+LA RL  PAS++IK LI +G+MVTINQAL+YE+A ++A++YGF+V E  DE   L++LEDED+  L PRPPVVTVLGHVDHGKTSLLDAIRK  VTAGEAGGITQ+IGAYT+   D  +TFIDTPGHEAFT MRARGA +TD+AILVVAADDGVMPQTIEAINHA+AA+VPIIVA+NK+D P AN DKV+QQLTEY LV EDWGGD
Sbjct:  323 RSRGDKGQTMQTPVAKIVEIPEAIALSELANRLGQPASELIKYLISQGRMVTINQALSYEEACEIAVAYGFKVGEMADESIPLEILEDEDESLLEPRPPVVTVLGHVDHGKTSLLDAIRKTTVTAGEAGGITQKIGAYTIKRNDRLITFIDTPGHEAFTHMRARGASITDLAILVVAADDGVMPQTIEAINHAKAAQVPIIVAINKIDLPQANTDKVMQQLTEYGLVSEDWGGD 556          
BLAST of mRNA_P-wetherbeei_contig16413.1.1 vs. uniprot
Match: F6BFI0_THEXL (Translation initiation factor IF-2 n=18 Tax=Thermoanaerobacterium TaxID=28895 RepID=F6BFI0_THEXL)

HSP 1 Score: 283 bits (725), Expect = 6.520e-88
Identity = 142/217 (65.44%), Postives = 175/217 (80.65%), Query Frame = 1
Query:  121 IEIPELISLSDLATRLRVPASDVIKTLIKEGQMVTINQALNYEQASKLAISYGFEVSEAVDEMPDLDLLEDED-QGELLPRPPVVTVLGHVDHGKTSLLDAIRKANVTAGEAGGITQRIGAYTVSYKDHPVTFIDTPGHEAFTAMRARGAQVTDIAILVVAADDGVMPQTIEAINHARAAKVPIIVAVNKVDKPNANPDKVLQQLTEYNLVPEDWGG 768
            I IP  I++ +L+ ++++  SD+IK LI +G MVTINQ ++YE AS++A  YGF + +  +   +L++++ ED + +LLPRPPV+TV+GHVDHGKTSLLDAIRK NVT  EAGGITQ IGA  V      V F+DTPGHEAFTAMRARGA VTDIA+LVVAADDGVMPQTIEAINHA+AA VPIIVA+NK+DKPNANPD+V Q+L EY LVPEDWGG
Sbjct:  107 ISIPAFITVKELSEKMKINPSDIIKKLISKGIMVTINQQIDYENASQIAEEYGFLLEKKEENEDNLEIMDKEDDEKDLLPRPPVITVMGHVDHGKTSLLDAIRKTNVTQREAGGITQHIGASVVEINGKKVVFLDTPGHEAFTAMRARGASVTDIAVLVVAADDGVMPQTIEAINHAKAANVPIIVAINKIDKPNANPDRVKQELVEYGLVPEDWGG 323          
BLAST of mRNA_P-wetherbeei_contig16413.1.1 vs. uniprot
Match: A0A3D5L4N8_9FIRM (Translation initiation factor IF-2 (Fragment) n=1 Tax=Lachnospiraceae bacterium TaxID=1898203 RepID=A0A3D5L4N8_9FIRM)

HSP 1 Score: 271 bits (693), Expect = 4.960e-86
Identity = 139/218 (63.76%), Postives = 167/218 (76.61%), Query Frame = 1
Query:  121 IEIPELISLSDLATRLRVPASDVIKTLIKEGQMVTINQALNYEQASKLAISYGF--EVSEAVDEMPDLDLLEDEDQGELLPRPPVVTVLGHVDHGKTSLLDAIRKANVTAGEAGGITQRIGAYTVSYKDHPVTFIDTPGHEAFTAMRARGAQVTDIAILVVAADDGVMPQTIEAINHARAAKVPIIVAVNKVDKPNANPDKVLQQLTEYNLVPEDWGG 768
            I IPE +++ DLA  + +  S++IK L   G+++T+N  + YE+A  +A  Y    E  E VDE+ +L   ++ED   L+PRPPVV V+GHVDHGKTSLLD IRK NVT+ EAGGITQ IGAYT   KD  +TF+DTPGHEAFTAMR RGAQ TDIA+LVVAADDGVMPQTIEAINHARAA V IIVAVNK DKPNA+PD+V QQLT+Y L+P DWGG
Sbjct:   30 ITIPEKLTIRDLADAMHMQPSEIIKKLFLAGKVMTVNSEITYEEAEDIAADYEILCEKEEKVDEIQELLKEDEEDPKNLVPRPPVVVVMGHVDHGKTSLLDYIRKTNVTSKEAGGITQAIGAYTAKVKDRTITFLDTPGHEAFTAMRLRGAQATDIAVLVVAADDGVMPQTIEAINHARAAGVEIIVAVNKCDKPNADPDRVRQQLTKYELIPSDWGG 247          
BLAST of mRNA_P-wetherbeei_contig16413.1.1 vs. uniprot
Match: A0A7X7E5X5_9BACT (Translation initiation factor IF-2 (Fragment) n=1 Tax=Fibrobacter sp. TaxID=35828 RepID=A0A7X7E5X5_9BACT)

HSP 1 Score: 268 bits (685), Expect = 5.120e-86
Identity = 140/237 (59.07%), Postives = 182/237 (76.79%), Query Frame = 1
Query:   70 RKRHDRNAPEV-VQVSNAIEIPELISLSDLATRLRVPASDVIKTLIKEGQMVTINQALNYEQASKLAISYGFEVSEAVDEMPDLDLLED--EDQGELLPRPPVVTVLGHVDHGKTSLLDAIRKANVTAGEAGGITQRIGAYTVSYKDHPVTFIDTPGHEAFTAMRARGAQVTDIAILVVAADDGVMPQTIEAINHARAAKVPIIVAVNKVDKPNANPDKVLQQLTEYNLVPEDWGGD 771
            +++H R   E+ VQ+ + I I + I++ DLA +L   +++++K L++ G M  INQ++++E A  +A  Y  +V  A+ E  +  LLE+  +++  L PRPPVVTV+GHVDHGKTSLLD IRKA+V +GEAGGITQ IGAY V+  D  VTFIDTPGHEAFTAMRARGA +TDI +LVVAADDGVMPQTIEAINH +AA VP +VAVNK+DKP ANPD+V+QQLTEY +V E+WGGD
Sbjct:   11 KQKHKRKKEEILVQLPDQISIEDNITVRDLAEKLHRGSAEIVKKLMELGIMAVINQSIDFETAEIVASLYEVKVERAISE--EEKLLEEIHDEEASLKPRPPVVTVMGHVDHGKTSLLDRIRKADVVSGEAGGITQHIGAYQVTVNDSRVTFIDTPGHEAFTAMRARGANLTDIVVLVVAADDGVMPQTIEAINHIKAANVPFVVAVNKIDKPEANPDRVMQQLTEYGIVAEEWGGD 245          
BLAST of mRNA_P-wetherbeei_contig16413.1.1 vs. uniprot
Match: UPI0011DFD5FD (translation initiation factor IF-2 n=2 Tax=Acetobacterium TaxID=33951 RepID=UPI0011DFD5FD)

HSP 1 Score: 280 bits (715), Expect = 8.000e-86
Identity = 145/230 (63.04%), Postives = 184/230 (80.00%), Query Frame = 1
Query:   97 EVVQVSNAIEIPELISLSDLATRLRVPASDVIKTLIKEGQMVTINQALNYEQASKLAISYGFEVSEAVDEMPD-----LDLLEDEDQGELLPRPPVVTVLGHVDHGKTSLLDAIRKANVTAGEAGGITQRIGAYTVSYKDHPVTFIDTPGHEAFTAMRARGAQVTDIAILVVAADDGVMPQTIEAINHARAAKVPIIVAVNKVDKPNANPDKVLQQLTEYNLVPEDWGGD 771
            + VQ++   EIP+++++ +LA  L + A+D+IKTL+  G MV INQ ++YE A+ +A  +  EV EA+ E+ D     L+  ++E+ G  + RPPVVTV+GHVDHGKTSLLD IRKANV AGEAGGITQ IGAYTV+ K   +TFIDTPGHEAFTAMR+RGAQ+TDIA+LVVAADDGVMPQTIEAINHA+AA VPI+VA+NK+DKP ANPD+V Q+LTEY LV E+WGG+
Sbjct:  165 KTVQLNQVFEIPDILTVGELAEILELNATDIIKTLMASGSMVNINQEIDYETAAIVAAEFDLEV-EAI-EIEDVVSKILEEYDEEETGNEVLRPPVVTVMGHVDHGKTSLLDRIRKANVIAGEAGGITQHIGAYTVNIKKQAITFIDTPGHEAFTAMRSRGAQITDIAVLVVAADDGVMPQTIEAINHAKAAGVPILVAINKIDKPGANPDRVKQELTEYGLVVEEWGGE 392          
BLAST of mRNA_P-wetherbeei_contig16413.1.1 vs. uniprot
Match: A0A1F2PFJ1_9FIRM (Translation initiation factor IF-2 n=8 Tax=Firmicutes TaxID=1239 RepID=A0A1F2PFJ1_9FIRM)

HSP 1 Score: 279 bits (714), Expect = 8.140e-86
Identity = 142/226 (62.83%), Postives = 182/226 (80.53%), Query Frame = 1
Query:  103 VQVSNAIEIPELISLSDLATRLRVPASDVIKTLIKEGQMVTINQALNYEQASKLAISYGFEVSEAVDEMPDLDLLEDEDQGEL---LPRPPVVTVLGHVDHGKTSLLDAIRKANVTAGEAGGITQRIGAYTVSYKDHPVTFIDTPGHEAFTAMRARGAQVTDIAILVVAADDGVMPQTIEAINHARAAKVPIIVAVNKVDKPNANPDKVLQQLTEYNLVPEDWGGD 771
            VQ++   EIPE++++ +LA  L + A++VIKTL+  G MV+INQ +++E A+ +A   GFEV     E     +LE+ D+ E    +PRPPVVTV+GHVDHGKTSLLD IRKANV AGEAGGITQ IGAYTV+  +H +T IDTPGHEAFTAMR+RGAQ+TDIA+LVVAADDGVMPQT+EAINHA+AA VPI+VA+NK+DKP A+P++V Q+LT+YNLV E+WGG+
Sbjct:  151 VQLNQTFEIPEVLTVGELADVLEISATEVIKTLMLAGTMVSINQEIDFETAAIVAAELGFEVEAIKIEDVVSKILEEYDEEESENEIPRPPVVTVMGHVDHGKTSLLDKIRKANVIAGEAGGITQHIGAYTVNINNHAITVIDTPGHEAFTAMRSRGAQITDIAVLVVAADDGVMPQTVEAINHAKAAGVPILVAINKIDKPGADPERVKQELTKYNLVVEEWGGE 376          
BLAST of mRNA_P-wetherbeei_contig16413.1.1 vs. uniprot
Match: A0A352WVW9_9FIRM (Translation initiation factor IF-2 (Fragment) n=5 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A352WVW9_9FIRM)

HSP 1 Score: 280 bits (716), Expect = 9.470e-86
Identity = 145/248 (58.47%), Postives = 193/248 (77.82%), Query Frame = 1
Query:   43 NFRGPRSGGRKRHDRN---APEVVQVSNAIEIPELISLSDLATRLRVPASDVIKTLIKEGQMVTINQALNYEQASKLAISYGFEVSEAVDEMPDLDLLED--EDQGELLPRPPVVTVLGHVDHGKTSLLDAIRKANVTAGEAGGITQRIGAYTVSYKDHPVTFIDTPGHEAFTAMRARGAQVTDIAILVVAADDGVMPQTIEAINHARAAKVPIIVAVNKVDKPNANPDKVLQQLTEYNLVPEDWGGD 771
            N  G RSG ++++DRN   AP  VQ+  ++++PE + +S+LA  LR+  S+V+K L+  GQ+VT+NQ+++Y+ A+ +A  +G      V    +  L+++  + + EL PR PVV V+GHVDHGKTSLLDAIR +NVTAGEAGGITQ IGAY V  KD  +TF+DTPGHEAFTAMRARGAQVTD+AILVVAADDG+MPQT+EA+NHA+AA V IIVA+NK+DK  ANPD++ Q+LT+Y+LVPE+WGGD
Sbjct:  171 NRSGQRSGYKRKNDRNRKSAPLKVQLPTSVQLPETMIVSELARELRITTSEVMKKLMSLGQIVTLNQSIDYDTAAIIADEFGVHAQPKVVVTIEEKLIDETHDTEEELKPRSPVVVVMGHVDHGKTSLLDAIRDSNVTAGEAGGITQHIGAYRVKVKDQNITFLDTPGHEAFTAMRARGAQVTDVAILVVAADDGIMPQTVEALNHAKAAGVSIIVAINKMDKNTANPDQIKQELTKYDLVPEEWGGD 418          
BLAST of mRNA_P-wetherbeei_contig16413.1.1 vs. uniprot
Match: UPI00164C07F8 (translation initiation factor IF-2 n=1 Tax=Acetobacterium fimetarium TaxID=52691 RepID=UPI00164C07F8)

HSP 1 Score: 278 bits (711), Expect = 2.350e-85
Identity = 143/226 (63.27%), Postives = 178/226 (78.76%), Query Frame = 1
Query:  103 VQVSNAIEIPELISLSDLATRLRVPASDVIKTLIKEGQMVTINQALNYEQASKLAISYGFEVSEAVDEMPDLDLLEDEDQGEL---LPRPPVVTVLGHVDHGKTSLLDAIRKANVTAGEAGGITQRIGAYTVSYKDHPVTFIDTPGHEAFTAMRARGAQVTDIAILVVAADDGVMPQTIEAINHARAAKVPIIVAVNKVDKPNANPDKVLQQLTEYNLVPEDWGGD 771
            VQ +   EIP+++++ +LA  L +  +DVIKTL+  G MV+INQ +++E A+ +A  +G EV     E     +LE+ D+ E    + RPPVVTV+GHVDHGKTSLLD IRKANV AGEAGGITQ IGAYTV+ K   +TFIDTPGHEAFTAMR+RGAQ+TDIAILVVAADDGVMPQT+EAINHA+AA VPI+VA+NK+DKP ANPD+V Q+LTEY LV E+WGG+
Sbjct:  153 VQQNQVFEIPDIVTVGELAEILEIGVTDVIKTLMLAGSMVSINQEIDFETAAIVAAEFGLEVQAIEIEDVVSKILEEYDEEETENEISRPPVVTVMGHVDHGKTSLLDRIRKANVIAGEAGGITQHIGAYTVNIKKQAITFIDTPGHEAFTAMRSRGAQITDIAILVVAADDGVMPQTVEAINHAKAAGVPILVAINKIDKPGANPDRVKQELTEYGLVVEEWGGE 378          
BLAST of mRNA_P-wetherbeei_contig16413.1.1 vs. uniprot
Match: H6LJX0_ACEWD (Translation initiation factor IF-2 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655 / WB1) TaxID=931626 RepID=H6LJX0_ACEWD)

HSP 1 Score: 277 bits (709), Expect = 4.620e-85
Identity = 139/228 (60.96%), Postives = 184/228 (80.70%), Query Frame = 1
Query:  103 VQVSNAIEIPELISLSDLATRLRVPASDVIKTLIKEGQMVTINQALNYEQASKLAISYGFEVS-----EAVDEMPDLDLLEDEDQGELLPRPPVVTVLGHVDHGKTSLLDAIRKANVTAGEAGGITQRIGAYTVSYKDHPVTFIDTPGHEAFTAMRARGAQVTDIAILVVAADDGVMPQTIEAINHARAAKVPIIVAVNKVDKPNANPDKVLQQLTEYNLVPEDWGGD 771
            VQ++   EIPE++++ +LA  L + A+++IKTL+  G MV+INQ +++E A+ ++   GFEV      + V ++  L+  +DE+    +PRPPVVTV+GHVDHGKTSLLD IRKANV AGEAGGITQ IGAYTV+  +H +T IDTPGHEAFTAMR+RGAQ+TDIA+LVVAADDGVMPQT+EAINHA+AA VPI+VA+NK+DKP A+P++V Q+LT+YNLV E+WGG+
Sbjct:  153 VQLNQTFEIPEILTVGELADVLEISATEIIKTLMLAGTMVSINQEIDFETAAIVSSELGFEVEAIKIEDVVSKI--LEEYDDEESVNEIPRPPVVTVMGHVDHGKTSLLDRIRKANVIAGEAGGITQHIGAYTVNISNHAITVIDTPGHEAFTAMRSRGAQITDIAVLVVAADDGVMPQTVEAINHAKAAGVPILVAINKIDKPGADPERVKQELTKYNLVVEEWGGE 378          
BLAST of mRNA_P-wetherbeei_contig16413.1.1 vs. uniprot
Match: A0A7C2YTT3_9CHLR (GTP-binding protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C2YTT3_9CHLR)

HSP 1 Score: 263 bits (673), Expect = 5.250e-85
Identity = 139/225 (61.78%), Postives = 169/225 (75.11%), Query Frame = 1
Query:  106 QVSNAIEIPELISLSDLATRLRVPASDVIKTLIKEGQMVTINQALNYEQASKLAISYGFEV-SEAVDEMPDLDLL--EDEDQGELLPRPPVVTVLGHVDHGKTSLLDAIRKANVTAGEAGGITQRIGAYTVSYKDHPVTFIDTPGHEAFTAMRARGAQVTDIAILVVAADDGVMPQTIEAINHARAAKVPIIVAVNKVDKPNANPDKVLQQLTEYNLVPEDWGGD 771
            Q +  + +PE I++ +L  RL +   +VIK L+K G M  INQA+ +E A+ LA   GF+V +E     P    +  E+ED G L PRPPVVTV+GHVDHGKT+LLD IR+ NV A E GGITQ IGAY V    H +TFIDTPGHEAFTA+RARGAQVTDIA+LVVAADDGVMPQT+EAINHA+AA VPIIVA+NKVD P A+P+KV +QLTE+ LV E+WGGD
Sbjct:    4 QGTRTVTLPETITVRELGERLGISPIEVIKGLMKRGIMANINQAVEFEAAAALAQELGFQVEAEGEKTAPQRPAVQEEEEDAGRLQPRPPVVTVMGHVDHGKTTLLDTIRRTNVAAQEVGGITQHIGAYQVEVDGHRITFIDTPGHEAFTALRARGAQVTDIAVLVVAADDGVMPQTVEAINHAKAAGVPIIVAINKVDLPGADPEKVKRQLTEHGLVVEEWGGD 228          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16413.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9AFS2_9BURK7.080e-10170.09Translation initiation factor IF-2 n=1 Tax=Burkhol... [more]
F6BFI0_THEXL6.520e-8865.44Translation initiation factor IF-2 n=18 Tax=Thermo... [more]
A0A3D5L4N8_9FIRM4.960e-8663.76Translation initiation factor IF-2 (Fragment) n=1 ... [more]
A0A7X7E5X5_9BACT5.120e-8659.07Translation initiation factor IF-2 (Fragment) n=1 ... [more]
UPI0011DFD5FD8.000e-8663.04translation initiation factor IF-2 n=2 Tax=Acetoba... [more]
A0A1F2PFJ1_9FIRM8.140e-8662.83Translation initiation factor IF-2 n=8 Tax=Firmicu... [more]
A0A352WVW9_9FIRM9.470e-8658.47Translation initiation factor IF-2 (Fragment) n=5 ... [more]
UPI00164C07F82.350e-8563.27translation initiation factor IF-2 n=1 Tax=Acetoba... [more]
H6LJX0_ACEWD4.620e-8560.96Translation initiation factor IF-2 n=1 Tax=Acetoba... [more]
A0A7C2YTT3_9CHLR5.250e-8561.78GTP-binding protein (Fragment) n=1 Tax=Chloroflexi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig16413contigP-wetherbeei_contig16413:8..778 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1094508.Tsac_1826
Preferred nameinfB
PFAMsGTP_EFTU,IF-2,IF2_N
Model size771
Max annot lvl186801|Clostridia
KEGG koko:K02519
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.07e-88
EggNOG OGsCOG0532@1|root,COG0532@2|Bacteria,1TPAI@1239|Firmicutes,248SJ@186801|Clostridia,42EP2@68295|Thermoanaerobacterales
DescriptionOne of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
Cds size771
COG categoryJ
BRITEko00000,ko03012,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186086.3968618-CDS-P-wetherbeei_contig16413:7..7781683186086.3968618-CDS-P-wetherbeei_contig16413:7..778Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig16413 8..778 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig16413.1.1prot_P-wetherbeei_contig16413.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig16413 8..778 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig16413.1.1

>prot_P-wetherbeei_contig16413.1.1 ID=prot_P-wetherbeei_contig16413.1.1|Name=mRNA_P-wetherbeei_contig16413.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=257bp
MGGQQGGGRPGQSRNFRGPRSGGRKRHDRNAPEVVQVSNAIEIPELISLS
DLATRLRVPASDVIKTLIKEGQMVTINQALNYEQASKLAISYGFEVSEAV
DEMPDLDLLEDEDQGELLPRPPVVTVLGHVDHGKTSLLDAIRKANVTAGE
AGGITQRIGAYTVSYKDHPVTFIDTPGHEAFTAMRARGAQVTDIAILVVA
ADDGVMPQTIEAINHARAAKVPIIVAVNKVDKPNANPDKVLQQLTEYNLV
PEDWGGD
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mRNA from alignment at P-wetherbeei_contig16413:8..778-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig16413.1.1 ID=mRNA_P-wetherbeei_contig16413.1.1|Name=mRNA_P-wetherbeei_contig16413.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig16413:8..778- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGTGGGCAGCAGGGTGGCGGTCGTCCCGGACAGTCGAGAAACTTCCG TGGCCCCCGCAGCGGTGGACGTAAGCGTCACGATCGGAACGCTCCTGAGG TCGTTCAGGTCTCCAACGCTATCGAGATTCCAGAATTGATTTCTCTGTCG GATCTGGCAACTCGACTTCGCGTTCCCGCTTCCGACGTCATCAAGACTCT CATCAAAGAGGGCCAGATGGTGACGATCAATCAGGCTCTCAACTACGAGC AGGCCTCTAAGCTAGCCATCTCTTACGGCTTCGAAGTCAGCGAGGCCGTC GATGAGATGCCCGATCTGGACCTGCTCGAAGATGAAGACCAGGGTGAATT GCTGCCGCGTCCTCCGGTCGTGACGGTTCTTGGTCACGTCGACCACGGTA AAACCTCACTCCTGGACGCCATCCGCAAGGCCAACGTCACGGCCGGCGAG GCTGGTGGAATCACGCAGCGCATCGGTGCTTACACGGTAAGCTACAAGGA TCATCCGGTAACCTTCATCGACACCCCGGGTCACGAAGCCTTCACGGCTA TGCGTGCTCGCGGTGCTCAAGTTACCGACATCGCGATTCTGGTGGTCGCG GCCGACGACGGCGTTATGCCGCAGACTATCGAAGCCATCAATCACGCTCG CGCTGCAAAGGTGCCCATCATTGTAGCTGTCAATAAAGTCGACAAGCCGA ACGCGAACCCCGATAAGGTTCTCCAACAGCTCACCGAGTATAACCTGGTG CCCGAGGACTGGGGCGGCGAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig16413:8..778-

>mRNA_P-wetherbeei_contig16413.1.1 ID=mRNA_P-wetherbeei_contig16413.1.1|Name=mRNA_P-wetherbeei_contig16413.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig16413:8..778- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGTGGGCAGCAGGGTGGCGGTCGTCCCGGACAGTCGAGAAACTTCCG
TGGCCCCCGCAGCGGTGGACGTAAGCGTCACGATCGGAACGCTCCTGAGG
TCGTTCAGGTCTCCAACGCTATCGAGATTCCAGAATTGATTTCTCTGTCG
GATCTGGCAACTCGACTTCGCGTTCCCGCTTCCGACGTCATCAAGACTCT
CATCAAAGAGGGCCAGATGGTGACGATCAATCAGGCTCTCAACTACGAGC
AGGCCTCTAAGCTAGCCATCTCTTACGGCTTCGAAGTCAGCGAGGCCGTC
GATGAGATGCCCGATCTGGACCTGCTCGAAGATGAAGACCAGGGTGAATT
GCTGCCGCGTCCTCCGGTCGTGACGGTTCTTGGTCACGTCGACCACGGTA
AAACCTCACTCCTGGACGCCATCCGCAAGGCCAACGTCACGGCCGGCGAG
GCTGGTGGAATCACGCAGCGCATCGGTGCTTACACGGTAAGCTACAAGGA
TCATCCGGTAACCTTCATCGACACCCCGGGTCACGAAGCCTTCACGGCTA
TGCGTGCTCGCGGTGCTCAAGTTACCGACATCGCGATTCTGGTGGTCGCG
GCCGACGACGGCGTTATGCCGCAGACTATCGAAGCCATCAATCACGCTCG
CGCTGCAAAGGTGCCCATCATTGTAGCTGTCAATAAAGTCGACAAGCCGA
ACGCGAACCCCGATAAGGTTCTCCAACAGCTCACCGAGTATAACCTGGTG
CCCGAGGACTGGGGCGGCGAT
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