mRNA_P-wetherbeei_contig16402.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig16402.2.1 vs. uniprot
Match: UPI001483484F (DUF4148 domain-containing protein n=1 Tax=Polaromonas sp. AER18D-145 TaxID=1977060 RepID=UPI001483484F) HSP 1 Score: 208 bits (530), Expect = 1.030e-67 Identity = 104/109 (95.41%), Postives = 105/109 (96.33%), Query Frame = 1
Query: 67 MSTQKLALIAAFAVLSGAPLAASAEIIHPADTEMGYVSHPDHAKPGKPRAEVRTELEAAMKSPRWDFWARLGAPMPAPSTGPGKLRDQVRNEAITANRAGLIPRGEFSY 393
MSTQKLALIAAFAVLSGA LA SAEIIHPADTEMGYVSHPDHAKPGK RAEVRTELEAAMKSPRWDFWARLGAPMPAPSTGPGK RDQVRNEAITA+RAGLIPRGEFSY
Sbjct: 1 MSTQKLALIAAFAVLSGASLAVSAEIIHPADTEMGYVSHPDHAKPGKSRAEVRTELEAAMKSPRWDFWARLGAPMPAPSTGPGKSRDQVRNEAITAHRAGLIPRGEFSY 109
BLAST of mRNA_P-wetherbeei_contig16402.2.1 vs. uniprot
Match: A0A6P2FXX9_9BURK (Uncharacterized protein n=1 Tax=Variovorax sp. RA8 TaxID=662548 RepID=A0A6P2FXX9_9BURK) HSP 1 Score: 80.5 bits (197), Expect = 4.400e-17 Identity = 49/109 (44.95%), Postives = 59/109 (54.13%), Query Frame = 1
Query: 64 IMSTQKLALIAAFAVLSGAPLAASAEI-IHPADTEMGYVSHPDH-AKPGKPRAEVRTELEAAMKSPRWDFWARLGAPMPAPSTGPGKLRDQVRNEAITANRAGLIPRGE 384
+++ LA F V + P AASA+ H A E G V H DH A PRA+V TELE A K W + +R GAP P GPGK R+QVR E + A R IP GE
Sbjct: 1 MLTKPSLAFTIVFGVSAAVPFAASADAPSHFAPNEAGVVYHRDHDAGKEMPRAQVVTELETASKQRHWTWASRYGAPWPVAKAGPGKTREQVRQETLEAMRKNEIPSGE 109
BLAST of mRNA_P-wetherbeei_contig16402.2.1 vs. uniprot
Match: A0A7U9HR43_DELAC (Uncharacterized protein n=3 Tax=Delftia TaxID=80865 RepID=A0A7U9HR43_DELAC) HSP 1 Score: 73.9 bits (180), Expect = 2.050e-14 Identity = 43/91 (47.25%), Postives = 52/91 (57.14%), Query Frame = 1
Query: 91 IAAFAVLSGAPLAASAEIIHPADTEMGYVSHPDHAKPGKPRAEVRTELEAAMKSPRWDFWARLGAPMPAPSTGPGKLRDQVRNEAITANRA 363
IAA G P ASAE HPA+ E G + HP+H K K RA+VR E+E AM+ R F P PAP TGPGK R +V NE + + A
Sbjct: 14 IAATVAALGLPGMASAEYWHPANNEAGVIVHPEHFKSTKTRAQVRAEVETAMREGRLSF-GESNYPPPAPYTGPGKTRAEVVNELLNESPA 103
BLAST of mRNA_P-wetherbeei_contig16402.2.1 vs. uniprot
Match: A0A0Q7DA32_9BURK (Uncharacterized protein n=1 Tax=Methylibium sp. Root1272 TaxID=1736441 RepID=A0A0Q7DA32_9BURK) HSP 1 Score: 70.5 bits (171), Expect = 3.660e-13 Identity = 47/107 (43.93%), Postives = 59/107 (55.14%), Query Frame = 1
Query: 67 MSTQKLAL--IAAFAVLSGAPLAASAEIIHPADTEMGYVSHPDHAKPGKPRAEVRTELEAAMKSPRWDFWARLGAPMPAPSTGPGKLRDQV----RNEAITANRAGL 369
MS+ K A +A ++ L+ + + H A E G+ HPDHAK GK RAEV TEL+AA K R AP+P STGPGK R +V RNE+ A RA L
Sbjct: 1 MSSFKFAFATVAVITAIALPGLSQATSLYHAAGGEAGFTYHPDHAKNGKTRAEVLTELDAARKDGTLALMQR-NAPLPVKSTGPGKTRQEVINEMRNESPEARRARL 106
BLAST of mRNA_P-wetherbeei_contig16402.2.1 vs. uniprot
Match: A0A562ZII4_9BURK (DUF4148 domain-containing protein n=1 Tax=Caenimonas sp. HX-9-20 TaxID=2596921 RepID=A0A562ZII4_9BURK) HSP 1 Score: 65.9 bits (159), Expect = 2.190e-11 Identity = 32/65 (49.23%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 67 MSTQKLALIAAFAVLSGAPLAASAEIIHPADTEMGYVSHPDHAKPGKPRAEVRTELEAAMKSPRW 261
M+ + A + A A +S LA +++HPA EMGY HPDHA+PGK RA+V +ELE A +SP W
Sbjct: 1 MALRMFAALLAMAAVSAPALAG--DVVHPATNEMGYTVHPDHARPGKTRAQVESELEQARQSPSW 63
BLAST of mRNA_P-wetherbeei_contig16402.2.1 vs. uniprot
Match: UPI00137A8068 (DUF4148 domain-containing protein n=1 Tax=Acidovorax sp. ST3 TaxID=2219062 RepID=UPI00137A8068) HSP 1 Score: 62.0 bits (149), Expect = 7.310e-10 Identity = 36/81 (44.44%), Postives = 45/81 (55.56%), Query Frame = 1
Query: 64 IMSTQKLALIAAFAVLSGAPLAASAEIIHPADTEMGYVSHPDHAKPGKPRAEVRTELEAAMKSPRWDFWARLGAPMPAPST 306
+ ST L LIA A+ SG +IH A+TEMGY SHPDHA K R +V E+E + K W + R GAP+P T
Sbjct: 6 LFSTVALVLIAGPALASG--------VIHSANTEMGYTSHPDHAAASKSRDQVNAEMEQSKKDGLWQYH-RFGAPVPVKGT 77
BLAST of mRNA_P-wetherbeei_contig16402.2.1 vs. uniprot
Match: A0A4D4JTF8_9BURK (Uncharacterized protein n=1 Tax=Acidovorax sp. NB1 TaxID=1943571 RepID=A0A4D4JTF8_9BURK) HSP 1 Score: 60.5 bits (145), Expect = 2.880e-9 Identity = 33/80 (41.25%), Postives = 47/80 (58.75%), Query Frame = 1
Query: 67 MSTQKLALIAAFAVLSGAPLAASAEIIHPADTEMGYVSHPDHAKPGKPRAEVRTELEAAMKSPRWDFWARLGAPMPAPST 306
M+ + L A A L+G LA+ +IH A+TEMGY +HPDHA GK R ++ ++E + K W + R GAP+P T
Sbjct: 1 MAIRTLLTTIALAALAGPTLASG--VIHSANTEMGYTTHPDHAAQGKSRDQIVADMEQSKKDGLWQYH-RFGAPVPVKGT 77
BLAST of mRNA_P-wetherbeei_contig16402.2.1 vs. uniprot
Match: A0A4Z0BZ58_9BURK (DUF4148 domain-containing protein n=1 Tax=Ramlibacter rhizophilus TaxID=1781167 RepID=A0A4Z0BZ58_9BURK) HSP 1 Score: 60.1 bits (144), Expect = 3.790e-9 Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = 1
Query: 88 LIAAFAVLSGAPLAASAEIIHPADTEMGYVSHPDHAKPGKPRAEVRTELEAAMKSPRWDFWARLGA 285
L+A FA L+ A A + ++IH A+TEMGY HPDHA G R +VR EL AA P W R+GA
Sbjct: 6 LLATFACLAAAAPAFAGQVIHGANTEMGYTVHPDHASQGLTREQVRAELMAAKAHPSW-AQLRVGA 70
BLAST of mRNA_P-wetherbeei_contig16402.2.1 vs. uniprot
Match: A0A7X0PB96_9BURK (Uncharacterized protein n=2 Tax=Acidovorax TaxID=12916 RepID=A0A7X0PB96_9BURK) HSP 1 Score: 60.1 bits (144), Expect = 4.160e-9 Identity = 29/68 (42.65%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 91 IAAFAVLSGAPLAASAEIIHPADTEMGYVSHPDHAKPGKPRAEVRTELEAAMKSPRWDFWARLGAPMP 294
+ A ++ + A A ++ +IHPA TEMGY +HP+HA+ GK R +V E+E + K W + R GAP+P
Sbjct: 7 LTALSLAAVAAPALASSVIHPASTEMGYTTHPEHAQAGKSRDQVLAEMEQSKKDGLWQYH-RFGAPVP 73
BLAST of mRNA_P-wetherbeei_contig16402.2.1 vs. uniprot
Match: A0A2M8X023_9BURK (Uncharacterized protein DUF4148 n=1 Tax=Acidovorax sp. 69 TaxID=2035202 RepID=A0A2M8X023_9BURK) HSP 1 Score: 59.3 bits (142), Expect = 8.060e-9 Identity = 28/60 (46.67%), Postives = 39/60 (65.00%), Query Frame = 1
Query: 127 AASAEIIHPADTEMGYVSHPDHAKPGKPRAEVRTELEAAMKSPRWDFWARLGAPMPAPST 306
A ++ +IHPA TEMGY +HP+HA+ GK R +V E+E A + W + R GAP+P T
Sbjct: 19 AMASSVIHPAPTEMGYTTHPEHAERGKSRDQVIAEMEKAKQDGLWQYH-RFGAPVPVKGT 77 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig16402.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig16402.2.1 >prot_P-wetherbeei_contig16402.2.1 ID=prot_P-wetherbeei_contig16402.2.1|Name=mRNA_P-wetherbeei_contig16402.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=132bp MPARRRKGCVPRAVPVPGKEIIMSTQKLALIAAFAVLSGAPLAASAEIIHback to top mRNA from alignment at P-wetherbeei_contig16402:931..1326- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig16402.2.1 ID=mRNA_P-wetherbeei_contig16402.2.1|Name=mRNA_P-wetherbeei_contig16402.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=396bp|location=Sequence derived from alignment at P-wetherbeei_contig16402:931..1326- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig16402:931..1326- >mRNA_P-wetherbeei_contig16402.2.1 ID=mRNA_P-wetherbeei_contig16402.2.1|Name=mRNA_P-wetherbeei_contig16402.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=396bp|location=Sequence derived from alignment at P-wetherbeei_contig16402:931..1326- (Phaeothamnion wetherbeei SAG_119_79)back to top |