mRNA_P-wetherbeei_contig1640.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1640.1.1 vs. uniprot
Match: A0A6V1NRV6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NRV6_HETAK) HSP 1 Score: 141 bits (355), Expect = 2.350e-40 Identity = 75/110 (68.18%), Postives = 85/110 (77.27%), Query Frame = 1
Query: 4 NRFRPAGGFSPPRGGAVTGGRGRPGARAKQGLDEEAMEEVKEAFNLFDTEGKGSIDIRELKAAFRALGFQVKKAEIRQMLMDISKEVTPTIAFNEFVEMVTPKILARDPK 333
+RFR AG FSPPR R G + KQGLD+EAMEE+KEAFNLFDTEGKG ID+RELKAAFRALGFQVKKAE+R ML +I KE T+ FNEFVE VTPK+L RD +
Sbjct: 4 SRFRSAGQFSPPR--------ARRGVKPKQGLDDEAMEEIKEAFNLFDTEGKGIIDVRELKAAFRALGFQVKKAELRTMLQEIDKESAATVEFNEFVEFVTPKMLNRDTR 105
BLAST of mRNA_P-wetherbeei_contig1640.1.1 vs. uniprot
Match: A0A482SIZ7_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SIZ7_9ARCH) HSP 1 Score: 137 bits (345), Expect = 6.280e-39 Identity = 71/112 (63.39%), Postives = 91/112 (81.25%), Query Frame = 1
Query: 1 MNRFRPAGGFSPPRGGAVTGGRGRPGARAKQGLDEEAMEEVKEAFNLFDTEGKGSIDIRELKAAFRALGFQVKKAEIRQMLMDISKEVTP-TIAFNEFVEMVTPKILARDPK 333
++RF+ + G SPPR RGR A+ K GLD+EAMEE+KEAFNLFDTEGKG+ID+RELKAAFRALGFQVKKAEIRQ+ +D+ K+++ T+ F+EFVEMVTP++L RD +
Sbjct: 7 LSRFKASAGLSPPR-------RGRAAAKPKAGLDDEAMEEIKEAFNLFDTEGKGNIDVRELKAAFRALGFQVKKAEIRQLFIDMDKDLSSATVTFDEFVEMVTPRMLNRDSR 111
BLAST of mRNA_P-wetherbeei_contig1640.1.1 vs. uniprot
Match: D8LK03_ECTSI (Putative: similar to centrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK03_ECTSI) HSP 1 Score: 136 bits (343), Expect = 1.460e-38 Identity = 71/94 (75.53%), Postives = 81/94 (86.17%), Query Frame = 1
Query: 61 GRGRPGA---RAKQGLDEEAMEEVKEAFNLFDTEGKGSIDIRELKAAFRALGFQVKKAEIRQMLMDISKEVTPTIAFNEFVEMVTPKILARDPK 333
GRGR GA R KQ LDEE+MEE+KEAF+LFDTEGKG+IDIRELKAAFRALGFQVKK EIR ML D+ KE +++FN+FVEMVTPK+LARDPK
Sbjct: 10 GRGRGGAAGGRGKQTLDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKEGAASVSFNDFVEMVTPKVLARDPK 103
BLAST of mRNA_P-wetherbeei_contig1640.1.1 vs. uniprot
Match: A0A6H5K0C1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0C1_9PHAE) HSP 1 Score: 135 bits (341), Expect = 1.340e-37 Identity = 73/111 (65.77%), Postives = 86/111 (77.48%), Query Frame = 1
Query: 1 MNRFRPAGGFSPPRGGAVTGGRGRPGARAKQGLDEEAMEEVKEAFNLFDTEGKGSIDIRELKAAFRALGFQVKKAEIRQMLMDISKEVTPTIAFNEFVEMVTPKILARDPK 333
++RFR +GG P G G R KQ LDEE+MEE+KEAF+LFDTEGKG+IDIRELKAAFRALGFQVKK EIR ML D+ KE +++FN+FVEMVTPK+LARDPK
Sbjct: 4 VSRFRNSGGGPSPXX-XXXXXXGAAGGRGKQTLDEESMEEIKEAFSLFDTEGKGAIDIRELKAAFRALGFQVKKQEIRGMLTDVDKEGAASVSFNDFVEMVTPKVLARDPK 113
BLAST of mRNA_P-wetherbeei_contig1640.1.1 vs. uniprot
Match: A0A812WEV1_SYMMI (Calmodulin n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WEV1_SYMMI) HSP 1 Score: 127 bits (318), Expect = 9.690e-35 Identity = 68/106 (64.15%), Postives = 86/106 (81.13%), Query Frame = 1
Query: 19 AGGFSPPRGGAVTGGRGRPGARAKQGLDEEAMEEVKEAFNLFDTEGKGSIDIRELKAAFRALGFQVKKAEIRQMLMDISKEV-TPTIAFNEFVEMVTPKILARDPK 333
A G SPP+ RGRP ++ KQGLD+E+MEE++EAFNLFDTEG+ ID+RELKAAFRALGFQVKKAEIRQM +D+ K++ + TI F+EFVEMVTP++L RD +
Sbjct: 9 AAGLSPPK-------RGRP-SKVKQGLDDESMEEIREAFNLFDTEGRAVIDVRELKAAFRALGFQVKKAEIRQMFVDMDKDLGSATITFDEFVEMVTPRMLGRDSR 106
BLAST of mRNA_P-wetherbeei_contig1640.1.1 vs. uniprot
Match: F0YQ62_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YQ62_AURAN) HSP 1 Score: 122 bits (307), Expect = 5.560e-33 Identity = 62/95 (65.26%), Postives = 76/95 (80.00%), Query Frame = 1
Query: 67 GRPG------ARAKQGLDEEAMEEVKEAFNLFDTEGKGSIDIRELKAAFRALGFQVKKAEIRQMLMDISKEVTPTIAFNEFVEMVTPKILARDPK 333
GRPG A + G+ EE MEE++EAFNLFDTEGKG IDI+ELKAAFRALGFQVKKAEIR+M+ D+ KE +PT+ F+EFVEM TPK+ +RD +
Sbjct: 18 GRPGGGRASRAPKRAGVSEEEMEEIREAFNLFDTEGKGVIDIKELKAAFRALGFQVKKAEIRRMMQDVDKESSPTVLFDEFVEMATPKMQSRDTR 112
BLAST of mRNA_P-wetherbeei_contig1640.1.1 vs. uniprot
Match: A0A7S2BLZ9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BLZ9_9STRA) HSP 1 Score: 122 bits (306), Expect = 7.870e-33 Identity = 61/90 (67.78%), Postives = 72/90 (80.00%), Query Frame = 1
Query: 64 RGRPGARAKQGLDEEAMEEVKEAFNLFDTEGKGSIDIRELKAAFRALGFQVKKAEIRQMLMDISKEVTPTIAFNEFVEMVTPKILARDPK 333
RGRPG+ K GL EE MEEVKEAF LFDTE +G+IDI+ELKAAFRALGF VKKAEIR+M+ +I KE + + + EFVEM TPK+ ARD K
Sbjct: 23 RGRPGSAKKVGLTEEEMEEVKEAFQLFDTENRGTIDIKELKAAFRALGFMVKKAEIREMMTNIDKETSAVVLYEEFVEMATPKVQARDTK 112
BLAST of mRNA_P-wetherbeei_contig1640.1.1 vs. uniprot
Match: K8YSR4_NANGC (Caltractin (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSR4_NANGC) HSP 1 Score: 116 bits (290), Expect = 8.070e-31 Identity = 63/111 (56.76%), Postives = 81/111 (72.97%), Query Frame = 1
Query: 4 NRFRPAGGF-SPPRGGAVTGGRGRPGARAKQGLDEEAMEEVKEAFNLFDTEGKGSIDIRELKAAFRALGFQVKKAEIRQMLMDISKEVTPTIAFNEFVEMVTPKILARDPK 333
+RFR G SPP R +PGA+ K GLDEE +EE++EAFNLFD++GKG+ID+RELKAAFRALGFQVKKAEIR L I KE+ T+ ++EF++M PK+ RD +
Sbjct: 8 SRFRQGAGLGSPP------SRRPKPGAKGK-GLDEEELEEIREAFNLFDSDGKGTIDVRELKAAFRALGFQVKKAEIRTFLQTIDKEMAATVTYDEFLDMAAPKVANRDER 111
BLAST of mRNA_P-wetherbeei_contig1640.1.1 vs. uniprot
Match: A0A7S3JY70_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JY70_9STRA) HSP 1 Score: 115 bits (287), Expect = 4.320e-30 Identity = 56/88 (63.64%), Postives = 70/88 (79.55%), Query Frame = 1
Query: 70 RPGARAKQGLDEEAMEEVKEAFNLFDTEGKGSIDIRELKAAFRALGFQVKKAEIRQMLMDISKEVTPTIAFNEFVEMVTPKILARDPK 333
R G + GL++E MEE++EAFNLFDTE G IDI+ELKAAFRALGFQVKKAE+R+ML DI KE + I F++FVEM TPK+ +RD +
Sbjct: 14 RKGVGKRPGLNDEEMEEIREAFNLFDTEASGCIDIKELKAAFRALGFQVKKAELRRMLQDIDKETSANITFDDFVEMATPKMQSRDTR 101
BLAST of mRNA_P-wetherbeei_contig1640.1.1 vs. uniprot
Match: A0A7S2WQU2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WQU2_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.920e-29 Identity = 58/82 (70.73%), Postives = 67/82 (81.71%), Query Frame = 1
Query: 88 KQGLDEEAMEEVKEAFNLFDTEGKGSIDIRELKAAFRALGFQVKKAEIRQMLMDISKEVTPTIAFNEFVEMVTPKILARDPK 333
K GL EE MEEVKEAF LFDTE KGSID++ELKAAFRALGFQVKKAEIRQM+ DI K + ++EFVEMVTPK+ +RD +
Sbjct: 37 KVGLSEEEMEEVKEAFQLFDTEQKGSIDVKELKAAFRALGFQVKKAEIRQMMTDIDKLDAAVVLYDEFVEMVTPKMQSRDTR 118 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1640.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1640.1.1 >prot_P-wetherbeei_contig1640.1.1 ID=prot_P-wetherbeei_contig1640.1.1|Name=mRNA_P-wetherbeei_contig1640.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=115bp MNRFRPAGGFSPPRGGAVTGGRGRPGARAKQGLDEEAMEEVKEAFNLFDTback to top mRNA from alignment at P-wetherbeei_contig1640:268..751- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1640.1.1 ID=mRNA_P-wetherbeei_contig1640.1.1|Name=mRNA_P-wetherbeei_contig1640.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=484bp|location=Sequence derived from alignment at P-wetherbeei_contig1640:268..751- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1640:268..751- >mRNA_P-wetherbeei_contig1640.1.1 ID=mRNA_P-wetherbeei_contig1640.1.1|Name=mRNA_P-wetherbeei_contig1640.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig1640:268..751- (Phaeothamnion wetherbeei SAG_119_79)back to top |