mRNA_P-wetherbeei_contig164.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig164.4.1 vs. uniprot
Match: A0A835Z5U5_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U5_9STRA) HSP 1 Score: 291 bits (745), Expect = 2.000e-90 Identity = 161/289 (55.71%), Postives = 200/289 (69.20%), Query Frame = 3
Query: 774 IPGIAGICAGAITALTCSPLDVAKIRIICQDSI---PGQRRYTGTFQTLRAILTQEGVRGWYRGISPALVSIPLFWASFFAVYEYTKPVLREWTGKEQHVLSAISAGAVTDVVTNPWWVVRTRMQTQILHAH--EGVVAMTMLQTFRTICRDEGVLSLYRGLTASFLGLTHVAIQIPVYEKLKAVARQRRGGCGPDDDRAS--DLVAASALSKLTGSVASYPHEVLRARMQDERGGKGLRRRGLFATAAKMVREEGATSLYSGFRLNILRVVPSCVATFVSYELIAREL 1619
+P IAG AG I ++ CSPLDVAK RI Q ++ +Y G TLR IL +EGVRGWY+GI+PALV +P+FW +F VYE K TG EQHVLSAISAG V DV TNP+WVVRTRMQTQ +H+ + + ML TFR I EGVL+ +RGLTAS LGL HVAIQ P+YE+ K++AR RR G D S +L AASA SKL + +YPHEVLR+RMQD RG + GL A A ++VR+EG +L++GF +N++RVVPSCVATFVSYELI R++
Sbjct: 20 VPSIAGAGAGMICSVLCSPLDVAKTRIQVQGAVCSTSNTAKYRGVLPTLRTILAEEGVRGWYQGITPALVIVPIFWGIYFGVYERAKRGFVSVTGAEQHVLSAISAGLVADVCTNPFWVVRTRMQTQAMHSELPQNARHLGMLATFRQIHAKEGVLAFWRGLTASLLGLGHVAIQFPLYERFKSLARDRRRKLGHVDTSESPLELAAASACSKLASTWLTYPHEVLRSRMQDARGPQ----MGLRAIATELVRQEGMRALWTGFGINLVRVVPSCVATFVSYELITRQV 304
BLAST of mRNA_P-wetherbeei_contig164.4.1 vs. uniprot
Match: A0A7R9UD11_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UD11_9STRA) HSP 1 Score: 244 bits (623), Expect = 1.470e-71 Identity = 136/299 (45.48%), Postives = 185/299 (61.87%), Query Frame = 3
Query: 768 HAIPGIAGICAGAITALTCSPLDVAKIRIICQDSI------PGQRRYTGTFQTLRAILTQEGVRGWYRGISPALVSIPLFWASFFAVYEYTKPVLREWTGKE----QHVLSAISAGAVTDVVTNPWWVVRTRMQTQILHAHEG----VVAMTMLQTFRTICRDEGVLSLYRGLTASFLGLTHVAIQIPVYEKLKAVARQRRGGCGPDDDRASDLVAASALSKLTGSVASYPHEVLRARMQDERGGKGLRRRGLFATAAKMVREEGATSLYSGFRLNILRVVPSCVATFVSYELIARELR 1622
H + ++G AG + L CSPLDV K R Q ++ Y G +T+R I +EG G+YRG+ PAL ++P+FW +F YE K +LR G++ + V +AI AGA+ DV TNP WVVRTRMQTQ LH+ G V + + R I +GV L+RG++ASFLGL HVA+Q P+YE LK ++R+ G +R DLV ASA SK+ GSV SYPHEV+RAR+QD K + GL T +V+ EG +LY+GFR+N++RV+PSCV FV+YEL+ +LR
Sbjct: 71 HLVSPVSGAGAGVVCTLVCSPLDVLKTRFQVQGAVLRSTADTTAEAYKGILRTVRTIFAEEGFAGFYRGLGPALFTVPIFWGLYFPTYEALKSLLRR-DGQQLTTAEIVSAAIGAGAIVDVATNPLWVVRTRMQTQHLHSRVGDLNRVKYSSSWRALRHIVATDGVQGLFRGISASFLGLIHVAVQFPIYEHLKQLSREANHG----KERKMDLVGASAASKICGSVISYPHEVIRARLQDS--SKPMEVTGLLRTVYDIVKYEGWQALYTGFRINLIRVIPSCVTVFVTYELLVNQLR 362
BLAST of mRNA_P-wetherbeei_contig164.4.1 vs. uniprot
Match: A0A7S1XSX1_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSX1_9STRA) HSP 1 Score: 243 bits (619), Expect = 5.530e-71 Identity = 136/301 (45.18%), Postives = 183/301 (60.80%), Query Frame = 3
Query: 768 HAIPGIAGICAGAITALTCSPLDVAKIRIICQDSI-------PGQRRYTGTFQTLRAILTQEGVRGWYRGISPALVSIPLFWASFFAVYEYTKPVL------REWTGKEQHVLSAISAGAVTDVVTNPWWVVRTRMQTQILHAHEGVVAM----TMLQTFRTICRDEGVLSLYRGLTASFLGLTHVAIQIPVYEKLKAVARQRRGGCGPDDDRASDLVAASALSKLTGSVASYPHEVLRARMQDERGGKGLRRRGLFATAAKMVREEGATSLYSGFRLNILRVVPSCVATFVSYELIAREL 1619
H + ++G AG + L CSPLDV K R Q ++ Q Y G +T+R ++ +EG G+YRG++PALV++P+FW +F YE K L RE + +L+A+ AG + D+ TNP WVVRTRMQTQ LH+ G A T+ + R I +GV L+RGL+ASFLGLTHVA+Q P+YE LK ++R+ G +R DLV ASA SK+ G V SYPHEVLRARMQD K + L TA +VR EG + Y+G +N++RV+PSCV TFV+YE+ A L
Sbjct: 66 HLVSPVSGAGAGVVCTLVCSPLDVLKTRFQVQGAVMRQTGSAAEQESYHGILRTVRTMVMEEGAAGFYRGLTPALVTVPIFWGLYFPTYEGLKATLEARNPGRERLQTHEIILAAMGAGIIVDITTNPLWVVRTRMQTQHLHSRVGDHARDRYKTITGSLRHILATDGVAGLFRGLSASFLGLTHVAVQFPIYEHLKRLSRENNNG----KERKIDLVFASAFSKVCGCVVSYPHEVLRARMQDS--SKNMSGSSLIRTAGDLVRNEGWQTFYTGLYVNLVRVIPSCVTTFVTYEVRAPRL 360
BLAST of mRNA_P-wetherbeei_contig164.4.1 vs. uniprot
Match: A0A836CIH5_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIH5_9STRA) HSP 1 Score: 227 bits (578), Expect = 2.210e-66 Identity = 129/283 (45.58%), Postives = 177/283 (62.54%), Query Frame = 3
Query: 771 AIPGIAGICAGAITALTCSPLDVAKIRIICQDSIP-GQRRYTGTFQTLRAILTQEGVRGWYRGISPALVSIPLFWASFFAVYEYTKPVLREWTGKEQHVLSAISAGAVTDVVTNPWWVVRTRMQTQILHAHEGVVAMTMLQTFRTICRDEGVLSLYRGLTASFLGLTHVAIQIPVYEKLKAVARQRRGGCGPDDDRAS-DLVAASALSKLTGSVASYPHEVLRARMQDERGGKGLRRRGLFATAAKMVREEGATSLYSGFRLNILRVVPSCVATFVSYELIAR 1613
A+P +AG AG I +L CSPLDVAK RI Q ++ G +YTG TL+ IL +EG++GWY+GI+PALV +P+FW +F VYE++K R TG EQHVLSA++ TD +TNP+WVVRTRMQTQ V ++ ++RT + P+YE+LKA+A +RR G + ++ AASA SKL + +YP+E+LRARMQD+R L A ++VR EG +L++GFR+N++RV+PSC+ATFVSYELIAR
Sbjct: 15 AVPSLAGAGAGIICSLLCSPLDVAKTRIQVQGALAKGAAKYTGVCPTLKTILAEEGIQGWYKGITPALVIVPVFWGIYFGVYEHSKGFFRRTTGNEQHVLSAMATSGFTDTITNPFWVVRTRMQTQ--------VELSSRNSYRTTLHT----------------------RFPLYERLKAMAVERRRRSGDASPVSPVEVAAASAASKLASTWVTYPNELLRARMQDQRSRTPP---SLRALVREIVRTEGVRALWTGFRVNMVRVLPSCMATFVSYELIAR 264
BLAST of mRNA_P-wetherbeei_contig164.4.1 vs. uniprot
Match: F2TZA2_SALR5 (NAD+ transporter n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TZA2_SALR5) HSP 1 Score: 218 bits (556), Expect = 1.700e-62 Identity = 131/299 (43.81%), Postives = 179/299 (59.87%), Query Frame = 3
Query: 783 IAGICAGAITALTCSPLDVAKIRIICQDS-IPGQRRYTGTFQTLRAILTQEGVRGWYRGISPALVSIPLFWASFFAVYEYTKPVLREWTGKE----QHVLSAISAGAVTDVVTNPWWVVRTRMQTQILHAHE-----GVV-------AMTMLQTFRT---ICRDEGVLSLYRGLTASFLGLTHVAIQIPVYEKLKAVARQRRGGCGPDDDRASDLVAASALSKLTGSVASYPHEVLRARMQDERGGKGLRRRGLFATAAKMVREEGATSLYSGFRLNILRVVPSCVATFVSYELIAREL 1619
+AG AG I + CSPLDVAK+R Q + +PG +Y G F T+R I +EG G +RG+ P+L+++PLFWA +F VY L + + QH ++AI+AG D TNP WVVRTRM + I H+ + G+ A+T L FR I R EGV +LY+GL+AS LGL+HVAIQ PVYEK K AR+ R + DL+ +SALSK S +YPHEV+R+R+QD R LR +++ EEG + G ++N++RV+PSCV FVSYELI+R +
Sbjct: 12 MAGAGAGVINCVLCSPLDVAKVRQQLQGAFVPGSPKYEGVFSTVRTIYKEEGAPGLFRGLRPSLMTMPLFWAIYFPVYGAMNQRLALMSNGDSATWQHCVAAITAGFAADCATNPLWVVRTRMISDIYHSPDTPTPSGLAPNGAESPAVTRLGVFRRMLYIGRTEGVTALYKGLSASMLGLSHVAIQFPVYEKFKQFARRHRND---SKETILDLIVSSALSKAIASTITYPHEVVRSRLQDSRSRTRLR-----DVVHRIMVEEGWHGFFRGLQVNLVRVLPSCVTVFVSYELISRAI 302
BLAST of mRNA_P-wetherbeei_contig164.4.1 vs. uniprot
Match: A0A7S4F1G9_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F1G9_CHRCT) HSP 1 Score: 220 bits (560), Expect = 1.190e-61 Identity = 120/284 (42.25%), Postives = 173/284 (60.92%), Query Frame = 3
Query: 783 IAGICAGAITALTCSPLDVAKIRIICQDSIPGQRRYTGTFQTLRAILTQEGVRGWYRGISPALVSIPLFWASFFAVYEYTKPVLREWT--GKEQ---HVLSAISAGAVTDVVTNPWWVVRTRMQTQILHAHEGVVAMTMLQTFRTICRDEGVLSLYRGLTASFLGLTHVAIQIPVYEKLKAVARQRRGGCGPDDDRASDLVAASALSKLTGSVASYPHEVLRARMQDERGGKGLRRRGLFATAAKMVREEGATSLYSGFRLNILRVVPSCVATFVSYELIAREL 1619
+AG +G A+ CSPLDVAK RI Q + +Y+G L I +EG RGWY+G++P + S+ +FW +F Y+Y+K ++ T G + H+ +A +G TDVVTNP WVVRTR+ TQ+ + V +ML FR I R+EG + + GL ASFLGL+H+ IQ P+YE+LK ++ R P D R ++AASA SKL S +YPHEV+RAR+Q ++ G + G+F K +R +G L+ GF LN +R +P C+ TF YEL+++ L
Sbjct: 120 VAGTISGLTAAVLCSPLDVAKTRIQVQSAALHGHKYSGVLTALLTIYREEGFRGWYQGLAPMMCSVGVFWCCYFPCYDYSKSLISAATSTGADSPLVHMAAAGVSGLFTDVVTNPLWVVRTRLATQVFVSTGPPVYESMLHAFRKIAREEGYSAFFAGLRASFLGLSHIMIQFPLYEQLKTKWQRDRA---PSDLR--PIIAASAFSKLVASSVTYPHEVVRARLQFDQKGT-VHYTGIFDVLRKTIRADGVRGLWQGFALNTVRTIPQCIVTFTLYELLSKHL 397
BLAST of mRNA_P-wetherbeei_contig164.4.1 vs. uniprot
Match: A0A6U0PVR8_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A6U0PVR8_9VIRI) HSP 1 Score: 218 bits (554), Expect = 1.610e-61 Identity = 134/324 (41.36%), Postives = 189/324 (58.33%), Query Frame = 3
Query: 762 VAHAIPGIAGICAGAITALTCSPLDVAKIRIICQ-----------DSIPGQRRYTGTFQTLRAILTQEGVRGWYRGISPALVSIPLFWASFFAVYEYTKPVLRE--WTGKE--QHVLSAISAGAVTDVVTNPWWVVRTRMQTQILHAH--EGVVAMTMLQTFRTICRDEGVLSLYRGLTASFLGLTHVAIQIPVYEKLKAVARQRRGGC-GPDDDRASDLVAASALSKLTGSVASYPHEVLRARMQDERGGKGLRRRGLFATAA--------------KMVREEGATSLYSGFRLNILRVVPSCVATFVSYELIARELRRRWIG 1637
V+ A +AG +G + +L CSPLDVA+ R + + S+ G YTG LR I TQEGVRGW+RG+ P+LV++P+FW+ +F +Y+ K +R W E +H+ A+SAGAV D++TNP WV+RTR+QT ++A +GV A+ +L+ R I R EG L+ Y+GL AS LGL+HVAIQ P+YE K +R G GP ++VA+S SK S +YPHEVLRAR+Q + G R G AA +++REEG +Y G LN++R +P+ TF +YE I +EL + IG
Sbjct: 46 VSQAFKAVAGGISGTVCSLVCSPLDVARTRAMVERTTLAAGAASGGSLNGM--YTGVVAPLRHIYTQEGVRGWFRGLVPSLVNVPVFWSLYFPMYDAAKQAVRSSGWDLPETMEHLAGAVSAGAVCDLITNPLWVLRTRLQTHNMYAAPGKGVRALGVLECARGILRHEGALAYYKGLGASLLGLSHVAIQFPLYEHFKKKCGERPGRRDGPLST--GEIVASSMGSKAIASTLTYPHEVLRARLQHQVTAVGRGRGGSSPGAAPRPRAYTGITDAVRQIIREEGIAGMYRGLSLNLVRTLPAVAVTFTTYEKIVQELPKLGIG 365
BLAST of mRNA_P-wetherbeei_contig164.4.1 vs. uniprot
Match: A0A7S3MDK1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDK1_9STRA) HSP 1 Score: 216 bits (549), Expect = 2.690e-61 Identity = 124/305 (40.66%), Postives = 189/305 (61.97%), Query Frame = 3
Query: 783 IAGICAGAITALTCSPLDVAKIRIICQDSIPGQRRYTGTFQTLRAILTQEGVRGWYRGISPALVSIPLFWASFFAVYEYTKPVLRE---WTGKEQHVLSAISAGAVTDVVTNPWWVVRTRMQTQILHAHEGVVA-MTMLQTFRTICRDEGVLSLYRGLTASFLGLTHVAIQIPVYEKLKAVARQRRGGCGPDDDRAS--DLVAASALSKLTGSVASYPHEVLRARMQDERGGKGLRRR-----------------GLFATAAKMVREEGATSLYSGFRLNILRVVPSCVATFVSYELIARELRRR 1628
+AG AG + + C+PLDV KIR+ Q S+ +R G F +++ I +EG+RG ++GI PALV++PLFW ++ +Y+ +K ++ H+++A++AGA+ DV+TNP+WVVRTR+QT LH+ + A ++ ++ + I +EG + Y+GL ASFLGL+HVAIQ P+YE LK VAR RG +D R + +L+ +S +KL S +YPHEVLRAR+QD RG ++ GL A +V+ EG SL+SG R+++ RVVP+ +TF++YE I+ L R
Sbjct: 27 LAGAGAGVVCTILCAPLDVTKIRMQVQGSLGTKRYSAGVFSSVKRIYIEEGLRGVFKGIGPALVTVPLFWGVYWPIYDRSKAYFESNPAFSVTGGHIMAAVTAGAIGDVITNPFWVVRTRIQTLALHSESRIAANVSTVEMMKIIYHNEGWKAFYKGLGASFLGLSHVAIQFPLYEYLKNVAR--RG----EDRRETFFELLFSSIAAKLVASSITYPHEVLRARLQDGRGVTYNKKMSMNAASSASVTAEPAKLGLVAVFRDIVKREGVLSLWSGLRVSLFRVVPATASTFLAYEYISHYLHER 325
BLAST of mRNA_P-wetherbeei_contig164.4.1 vs. uniprot
Match: B8BS39_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS39_THAPS) HSP 1 Score: 211 bits (538), Expect = 5.330e-60 Identity = 121/294 (41.16%), Postives = 179/294 (60.88%), Query Frame = 3
Query: 786 AGICAGAITALTCSPLDVAKIRIICQDSIPGQRRYTGTFQTLRAILTQEGVRGWYRGISPALVSIPLFWASFFAVYEYTKPVLREWT------GKEQHVL----SAISAGAVTDVVTNPWWVVRTRMQTQILHAHEGVVAMT----MLQTFRTICRDEGVLSLYRGLTASFLGLTHVAIQIPVYEKLKAVARQRRGGCGPDDDRASDLVAASALSKLTGSVASYPHEVLRARMQDERGGK-GLRRRGLFATAAKMVREEGATSLYSGFRLNILRVVPSCVATFVSYELIARELR 1622
AG+ +G++ ++ C+PLD+ + R+ + G + Q++ I +GVRG +RG+ L ++P FW +F +YE K + EW+ G H L SAI+AG + DVV NP +VVRTRMQT+ LH VA ++ T ++ ++ G+ +RGLTAS LGL HV IQ PVYE+LKA AR+R ++ DL+ AS LSK++ ++ +YPHEV+R+RM D RG G+ +F T +V+ EG + LY G R++++RVVP+C TFVSYELIAR +R
Sbjct: 3 AGVGSGSLASIVCAPLDLVRTRMQVAGGLDGAKANPKIVQSIYEIYLSDGVRGCFRGLGATLATVPAFWGLYFPMYESFKRKILEWSSDYGDGGHNHHALVHLGSAITAGGLADVVCNPMFVVRTRMQTEALHYFHMPVADRKPHGVMSTVLSLYKEGGIPIFWRGLTASLLGLGHVGIQFPVYERLKAEARKRSP---TGEESPVDLLLASGLSKMSAAIITYPHEVVRSRMMDARGATAGMN---IFNTIGHIVKTEGYSGLYVGLRVSLVRVVPNCCVTFVSYELIARWVR 290
BLAST of mRNA_P-wetherbeei_contig164.4.1 vs. uniprot
Match: A9VCV4_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VCV4_MONBE) HSP 1 Score: 212 bits (539), Expect = 7.680e-60 Identity = 125/293 (42.66%), Postives = 172/293 (58.70%), Query Frame = 3
Query: 783 IAGICAGAITALTCSPLDVAKIRIICQDSI-PGQRRYTGTFQTLRAILTQEGVRGWYRGISPALVSIPLFWASFFAVYEYTKPVLREWTGKEQHV--------LSAISAGAVTDVVTNPWWVVRTRMQTQILHAHEGVVA--MTMLQTFRTICRDEGVLSLYRGLTASFLGLTHVAIQIPVYEKLKAVARQRRGGCGPDD-DRASDLVAASALSKLTGSVASYPHEVLRARMQDERGGKGLRRRGLFATAAKMVREEGATSLYSGFRLNILRVVPSCVATFVSYELIARELRR 1625
+AG G + AL CSPLDVAK+R + I PG G + LR I QEG RGW+RG+ P+L+++P FWA++F +Y+ R G E + L+A+ A V DV+TNP WVVRTR+ + + H E V +++ I + EG+ +LY+GL ASFLGL HVAIQ P+YE+LK AR PD + L+ ASA SKL +YPHEV+RARMQD R GL + A +++ +G Y G +NILRV+PSC+ TFV+YELI + + +
Sbjct: 44 LAGAGGGLVNALVCSPLDVAKVRQQVEGVIHPGTSHQAGLWTILRDIRNQEGYRGWFRGLQPSLITLPFFWATYFPLYD----AFRRRLGVEPNTRGAVWKSCLAAMGAAGVVDVLTNPLWVVRTRIISAVYHRTEQAVLQRLSVPGHMLHIAKHEGITALYKGLGASFLGLLHVAIQFPLYEELKHRARD----ASPDGRESILGLILASAGSKLVAGTITYPHEVVRARMQDSRNPAGLA-----SIAKNILQADGWRGFYRGLHINILRVLPSCITTFVTYELIKQAIHK 323 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig164.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig164.4.1 >prot_P-wetherbeei_contig164.4.1 ID=prot_P-wetherbeei_contig164.4.1|Name=mRNA_P-wetherbeei_contig164.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=368bp MDPARVRHSPVDAHRAPRSLEKKRAKEKRRGSYCMALNEEREKKADKKGNback to top mRNA from alignment at P-wetherbeei_contig164:5392..8346+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig164.4.1 ID=mRNA_P-wetherbeei_contig164.4.1|Name=mRNA_P-wetherbeei_contig164.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2955bp|location=Sequence derived from alignment at P-wetherbeei_contig164:5392..8346+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig164:5392..8346+ >mRNA_P-wetherbeei_contig164.4.1 ID=mRNA_P-wetherbeei_contig164.4.1|Name=mRNA_P-wetherbeei_contig164.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1104bp|location=Sequence derived from alignment at P-wetherbeei_contig164:5392..8346+ (Phaeothamnion wetherbeei SAG_119_79)back to top |